<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 19:53:31"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E612272" ref_strand="+" ref_description="SGN-E612272 [62033]">
      <seq>ctcattatgcatggacagaaaagcaaaggcatccacagggtacagatctacggatacagaatgtccctgtgggcagagcaccttgggaggatagaagaatgttcaaggaaccagaggcgctaacatgcgtgaggagggtgaatgaggtttctgaaggtaactggaagagttacacagctgaaaatttcactcaactacaaggacatcttctcaattttttaacacttgtatgcgcggacgggaaagtaggtccattacctgaatatgaaaatttccctgatgtagggggtagaatactgggaaatcatgccccaactatcccagatgttttgaccacatagtcctcaataattaacacaattgtgagtgtttggacactgtaaaaatatgtagctgcaagatcctccttatttgtcattttgtacatttgttctatgttgtacaatacagggtgaaaaaacaggtagaaatgatttgattgtgggcttgtatttctgctggatattggggacgataaagttgagatgttaattgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="1" stop="1142"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="198" g_stop="241" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="242" i_stop="336" i_length="95">
            <donor d_prob="0.831" d_score="0.91"/>
            <acceptor a_prob="0.970" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="337" g_stop="804" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="510" r_length="465" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E612272" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E612272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="198" e_stop="241"/>
          <exon e_start="337" e_stop="804"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATTATGCATGGACAGAAAAGCAAAGGCGTCCACGGGG-ACAGGTTTGATAGAAAATCACATAATGCACATACTTTATCTTGAGAAGACGTTAACGAAACCGGATGCATTTATTTATTCATCTTGTCTTGATCTCCAGATCTATGGATACAGAATGTCCCTATGGGCAGAACACCTTGGGAGGATAGAAGAATGTTTCAAGGAACCAGAGGCGCTAACATGCGTGAGGAAGGTGAATGAGGTTGCTGAAGGAAACTGGAAGAGTTACACAGCTGAAAAGTTCACTCAACTACATGGACATCTTCTCAAGTATCCAATACATGTAGGCGCGGACGGGAAAGTAGGTCCATTAGCTGAATATGAAAATTTCCCAGATGTAGGAGGTAGAATTCTGGGAAATCATGCCCCTACTATCCCAGATGTTTTGACTACATAGTCAGTCCTCAATAATTAACACGATTGTGAGTGTTTGGACACTCTGAAAATATGTAGCTGCAAGA---TCCTTATTAGTCAATTTTGTACATTTGTTCTATGTTGTACAATAGAGGGTGAAAAAAAGGATAGAAATGATATGATTGTGGGCTTGTATTTGTGCTGAATATTGTGG</genome_strand>
        <mrna_strand>CTCATTATGCATGGACAGAAAAGCAAAGGCATCCACAGGGTACAG...............................................................................................ATCTACGGATACAGAATGTCCCTGTGGGCAGAGCACCTTGGGAGGATAGAAGAATG-TTCAAGGAACCAGAGGCGCTAACATGCGTGAGGAGGGTGAATGAGGTTTCTGAAGGTAACTGGAAGAGTTACACAGCTGAAAATTTCACTCAACTACAAGGACATCTTCTCAATTTTTTAACACTTGTATGCGCGGACGGGAAAGTAGGTCCATTACCTGAATATGAAAATTTCCCTGATGTAGGGGGTAGAATACTGGGAAATCATGCCCCAACTATCCCAGATGTTTTGAC--CACA-T-AGTCCTCAATAATTAACACAATTGTGAGTGTTTGGACACTGTAAAAATATGTAGCTGCAAGATCCTCCTTATTTGTC-ATTTTGTACATTTGTTCTATGTTGTACAATACAGGGTGAAAAAACAGGTAGAAATGATTTGATTGTGGGCTTGTATTTCTGCTGGATATTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208059" ref_strand="+" ref_description="SGN-E208059 [cLEC-34-O16]">
      <seq>ttaaagcttcaactcttgcatcattctagtcgagtcaatttagggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccataagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7123" stop="9645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7423" g_stop="7513" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="111" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="222" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="0.98"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="322" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9345" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="440" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E208059" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E208059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7423" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCG</genome_strand>
        <mrna_strand>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCATAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265803" ref_strand="+" ref_description="SGN-E265803 [cLEI-11-E15]">
      <seq>tcaactcttgcatcattctagtcgagtcaatttagggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagaagacattacgtcagctttgttggcagcaatcaaagatgatcagttcttccattgcaacattatattcactcagcttgaccaaatggcccgctaaaacagcttttcacatgcatctgatcgactaaacttagcaactattttgccaaacaactatacaacctcagcaaatacttcaaactctcaactaatcaagggtcattatcaacaatagaatcaggcttttatgtctcgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7131" stop="9999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7431" g_stop="7513" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="103" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="214" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="314" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="464" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="9467" i_length="90">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9468" g_stop="9694" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="691" r_length="227" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E265803" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265803" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7431" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="9468" e_stop="9694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATG</genome_strand>
        <mrna_strand>TCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG..........................................................................................AAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745256" ref_strand="+" ref_description="SGN-E745256 [GI|47105822]">
      <seq>ggcatcattctagtcgagtcaatttagggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctcctcgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaacgagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgtggccgtggtgactatgggtaccgaagatctccaagacgttctccatatagaggtgggcgagattattctcccagacactctccatatagaggtgggcgagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgaaaggaactaccctcgtggttatagataagtgggtttcgtcctcagctatggaaactgcttttgtaaggatctataagtttgatgtggactagtcttgatgttaaagagtactggttaatgaatgtatgtctgggttacaccttgaatctggattatctgtaatctttctgaaactttatgatgtatgtattctctttcgttgcttgttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7140" stop="61920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7439" g_stop="7513" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="95" r_length="20" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="206" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="306" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="456" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="529" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10310" g_stop="10716" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="936" r_length="407" r_score="0.998"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="10717" i_stop="11527" i_length="811">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.610" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="11528" g_stop="11550" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="937" r_stop="959" r_length="23" r_score="0.565"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E745256" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>959</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7439" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10716"/>
          <exon e_start="11528" e_stop="11550"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTCATTTTGTTGTCTTCATGGTCGTGACATCGTTTACGATATCTGTTGGTTCATTCTTACATGTTGTTTAGCAACTTTCTGGCTCGTGGCTTTATCATTGTCAAGATCCTCTCTTTTCTTGCAACTTGGATATTAGTTTGAAGTGAAAATGTACACTTCACCCAGTAATTTGCTTAATGGTATTTTCTTGAACAAAATGGAGTAGCTGAGTTTATTAGATATTTGTTGATGACTTGATTTTACAAGATATGACGTTCTTGGAGATGTGTCGTGATAAAGTAGCCATGTTCGTTATTACAAGGTGGTCCAACCCCAACATGACATTTGACTCATTCTAGTACAAACACGAGGGCCTACGAGCTTATCAAGTTGTTAAAAGTAGGTTCTTTAGTTAATTAGACATCCAATTATAAAAAAAGAGTAACAAATGGATAAGAATTAAGATGACTAGACACGGAACAAGCTTCCAAATGTCAACAATAATATCCTAGATTTTCTAATGAGCACGTGAAGATATTTTACGAGTTAGTGTAAGTATTATATTTTGGTAATTGTTAATAACAAACGTTGAAAAGAGAATGTGCCTCAATAATCATGAATTGGTATGTGGATACATAGACTATTCACTAGTCTTACATATATGACGTTTTCTTCTTCTTCTTTATACTCATACATATGACCTCACTAGTCTTACATATATGACTTTTTCTTCTTCTTCTTTATACACATACATATGACCTAGTAGTAAGAGCTTTGACTATTTTTGTGCAAAAATTTAAAGGGAGACCCTTGTGAAGTTAAATATTGCTAGGTGAACAGAAGGGTTAGGAAAAA</genome_strand>
        <mrna_strand>GGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCTCGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACGAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATCTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310382" ref_strand="+" ref_description="SGN-E310382 [cTOA-10-C24]">
      <seq>tcaatttagggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctgggcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7157" stop="10537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7457" g_stop="7513" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="77" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="188" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="288" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="438" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="511" r_length="73" r_score="0.986"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10310" g_stop="10323" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="525" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E310382" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7457" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGAT</genome_strand>
        <mrna_strand>TCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGGCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310947" ref_strand="+" ref_description="SGN-E310947 [cLEZ-17-D18]">
      <seq>tcaatttatggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7157" stop="10511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7457" g_stop="7513" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="77" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="188" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="288" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="438" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10211" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="493" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E310947" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7457" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATC</genome_strand>
        <mrna_strand>TCAATTTATGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306573" ref_strand="+" ref_description="SGN-E306573 [cLEX-13-H20]">
      <seq>tcaatttagggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7157" stop="10511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7457" g_stop="7513" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="77" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="188" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="288" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="438" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10211" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="493" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E306573" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7457" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATC</genome_strand>
        <mrna_strand>TCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322597" ref_strand="+" ref_description="SGN-E322597 [cTOB-26-C23]">
      <seq>caatttagggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggcaagctttgctctctctaatctcccattatatctttcttctatttaacatatatgtgtttttttgcatattttcagaattttttaacctaattaattgtcgaaacaacaaattttatcatctttatgatttcttgcaggctgattctccacgcaaaaggtaccactctgtttctttatagaactttgaggattttctgtttatttgttgcatcgacttgatccgtctaactttccgtaattggttttatctttattagggtttttttgtctgtatttcgctgatctatattttctttatttggttgttggccttgtgaatggtgaatacattgttttattcatcaggctagttgggatatctatgtggtgtaaaaaaattgaatggggtttgttggattttggggagttcactttgatttgtgttttggagagatgttaatgtgttaatcttttttaatagagaaatggtaaggtatgaatctgtttttggaagaattgtttttaagtttatcatgtagaattagttttccgtttgttttattggggaatgtcactgaagcataaaacatttctgagaatctcatattttgtatatatgggtaattctgtatataataaagtcattaatcctatgccttacttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7158" stop="8460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7458" g_stop="8160" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E322597" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7458" e_stop="8160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATG</genome_strand>
        <mrna_strand>CAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344591" ref_strand="+" ref_description="SGN-E344591 [cTOF-14-O7]">
      <seq>tttagggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaaggtcagctatttatacattgattggtgaaccattgttctgttggcttgcttttcttttttcttgacttggaggttttctgattatattcagaagacattacgtcagctttgttggcagcaatcaaagatgatcagttcttccattgcaacattatattcactcagcttgaccaaatggcccgctaaaacagcttttcacatgcatctgatcgactaaacttagcaactattttgccaaacaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7161" stop="9919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7461" g_stop="7513" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="73" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="184" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="284" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9619" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="676" r_length="392" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E344591" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344591" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7461" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAAC</genome_strand>
        <mrna_strand>TTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E572605" ref_strand="+" ref_description="SGN-E572605 [31785]">
      <seq>gtttgtccctcatattggcaatttaggggttcgcttccctcatctgaaatggctgattctcctcgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaaggtctcgctctcgatccccaactagaacacagtcaaggccaagaggaagatccaggtccagaagtcatggaagggctgaagaaactaatcccggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgcttttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacagtggagaagtctcgtagaaaacgcccaaggactccaacacctggtcattatcttgggcttcatcagagcggaaggggtgatggttatcatggtgatcgtggtaggtatcgtggccgtggtgactatgggtaccgaagatctccaagacgctctccatatagagggtgggagagattatttctcctagacgctcaccttatgctggaaggtcgagacgtgcacaatcccggtcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7169" stop="10725"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7465" g_stop="7513" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.714"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.71"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="71" r_length="20" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="182" r_length="111" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="0.96"/>
            <acceptor a_prob="0.531" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="282" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="433" r_length="151" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="506" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10310" g_stop="10421" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="620" r_length="114" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E572605" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E572605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7465" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10421"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGATCGCTTCGTATTGGCAATTTAGG-GTTCGCT-CCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGC-TTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGA-GGTGGGCGAGATTA-TTCTCCCAGACACTCTCC</genome_strand>
        <mrna_strand>GTTTGTCCCTCATATTGGCAATTTAGGGGTTCGCTTCCCTCATCTGAAATG...........................................................................................................................................GCTGATTCTCCTCGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGGTCTCGCTCTCGATCCCCAACTAGAACACAGTCAAGGCCAAGAGGAAGATCCAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGAAACTAATCCCGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACAGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGCCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGGAAGGGGTGATG................................................................................GTTATCATGGTGATCGTGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGCTCTCCATATAGAGGGTGGGAGAGATTATTTCTCCTAGACGCTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339475" ref_strand="+" ref_description="SGN-E339475 [cTOF-4-J18]">
      <seq>ggatcgcttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgtggccgtggtgactatgggtaccgaagatctccaagacgttctccatatagaggtgggcgagattattctcccagacactctccatatagaggtgggcgagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgaaagaactaccctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7166" stop="10826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7466" g_stop="7513" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="68" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="179" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="279" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="429" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="502" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10310" g_stop="10526" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="718" r_length="216" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E339475" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7466" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCG</genome_strand>
        <mrna_strand>GGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAA-GAACTACCCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715940" ref_strand="+" ref_description="SGN-E715940 [FB15CG05]">
      <seq>ttcgtattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgtggccgtggtgactatgggtaccgaagatctccaagacgttctccatatagaggtgggcgagattattctcccagacactctccatatagaggtgggcgagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgaaaggaactaccctcgtggttatagataagtgggtttcgtcctcagctatggaaactgcttttgtaaggatctataagtttgatgtggactagtcttgatgttaaagagtactgggtaatgattgtatgtctgggttacaccttgaatgtggattatctgtaatctttctgaaactttatgatgtaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7173" stop="125911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7473" g_stop="7513" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="61" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="172" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="272" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="422" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="495" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10310" g_stop="10693" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="879" r_length="384" r_score="0.995"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="10694" i_stop="11782" i_length="1089">
            <donor d_prob="0.405" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="11783" g_stop="11800" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="880" r_stop="897" r_length="18" r_score="0.778"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E715940" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7473" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10693"/>
          <exon e_start="11783" e_stop="11800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTCATTTTGTTGTCTTCATGGTCGTGACATCGTTTACGATATCTGTTGGTTCATTCTTACATGTTGTTTAGCAACTTTCTGGCTCGTGGCTTTATCATTGTCAAGATCCTCTCTTTTCTTGCAACTTGGATATTAGTTTGAAGTGAAAATGTACACTTCACCCAGTAATTTGCTTAATGGTATTTTCTTGAACAAAATGGAGTAGCTGAGTTTATTAGATATTTGTTGATGACTTGATTTTACAAGATATGACGTTCTTGGAGATGTGTCGTGATAAAGTAGCCATGTTCGTTATTACAAGGTGGTCCAACCCCAACATGACATTTGACTCATTCTAGTACAAACACGAGGGCCTACGAGCTTATCAAGTTGTTAAAAGTAGGTTCTTTAGTTAATTAGACATCCAATTATAAAAAAAGAGTAACAAATGGATAAGAATTAAGATGACTAGACACGGAACAAGCTTCCAAATGTCAACAATAATATCCTAGATTTTCTAATGAGCACGTGAAGATATTTTACGAGTTAGTGTAAGTATTATATTTTGGTAATTGTTAATAACAAACGTTGAAAAGAGAATGTGCCTCAATAATCATGAATTGGTATGTGGATACATAGACTATTCACTAGTCTTACATATATGACGTTTTCTTCTTCTTCTTTATACTCATACATATGACCTCACTAGTCTTACATATATGACTTTTTCTTCTTCTTCTTTATACACATACATATGACCTAGTAGTAAGAGCTTTGACTATTTTTGTGCAAAAATTTAAAGGGAGACCCTTGTGAAGTTAAATATTGCTAGGTGAACAGAAGGGTTAGGAAAAATTCTCCAACAAAATACGAGTGTTAGGAGCATGCGATGCACGTTTTGGCGCACTCTTACCTTAAGGCCAACCATTTCCTTCCACGTGTTCTATAACAATTAACAGACAACTACTAAGTAATCATGTTTGATGATTGAATTTAAAGTTTATTTTCAAAAAATAAAGTAATTTAAAATTAAAACTTTAGTGATGGACTAAATGCTACTCCCCCAAAAAAAAAAAGTAGTATCTACCTAAAAAAAAAAAATCAT</genome_strand>
        <mrna_strand>TTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGGTAATGATTGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E342460" ref_strand="+" ref_description="SGN-E342460 [cTOF-8-K24]">
      <seq>tcgtattggcaatttagggttcgctccatcatccgaaatggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgtggccgtggtgactatgggtaccgaagatctccaagacgttctccatatagaggtgggcgagattattctcccagacactctccatatagaggtgggcgagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatccccgtcatattctncttatgaaaggactacccctcgtgttatagataagtgggntttcgtcctcagctatggaaactgcttttgtaaggatctantagtttgatgtggactagtcttgatgttaaagagtactggttaatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7174" stop="10934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7474" g_stop="7513" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="8612" i_length="1099">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="151" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="251" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="401" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="474" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10310" g_stop="10634" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="799" r_length="325" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E342460" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7474" e_stop="7513"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTA-CCCTCGTGGTTATAGATAAGTGGG-TTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAAT</genome_strand>
        <mrna_strand>TCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCCGTCATATTCTNCTTATGAAAGG-ACTACCCCTCGT-GTTATAGATAAGTGGGNTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTANTAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395675" ref_strand="+" ref_description="SGN-E395675 [TUS-17-I8]">
      <seq>tattggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtaccactctgtttctttatagaactttgaggattttctgtttatttgttgcatcgacttgatccgtctaactttccgtaattggttttatctttattagggtttttttgtctgtatttcgctgatctatattttctttatttggttgttggccttgtgaatggtgaatacattgttttattcatcaggctagttgggatatctatgtggtgtaaaaaaattgaatggggtttgttggattttggggagttcactttgatttgtgttttggagagatgttaatgtgttaatcttttttaatagagaaatggtaaggtatgaatctgtttttggaagaattgtttttaagtttatcatgtagaattagttttccgtttgttttattggggaatgtcactgaagcataaaacatttctgagaatctcatattttgtatatatgggtaattctgtatataataaagtcattaatcctatgccttacttatgcaagggataaggttcaattttttctctctctttgatttgaagtaatgttttccagggaacatcctattgaagtctccccctgtatggtcgtcaaaaatcctcctacttattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7177" stop="8572"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7477" g_stop="7513" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="8272" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="657" r_length="620" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E395675" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7477" e_stop="7513"/>
          <exon e_start="7653" e_stop="8272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTG</genome_strand>
        <mrna_strand>TATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTATTGAAGTCTCCCCCTGTATGGTCGTCAAAAATCCTCCTACTTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213264" ref_strand="+" ref_description="SGN-E213264 [cLEC-71-A21]">
      <seq>attggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtaccactctgtttctttatagaactttgaggattttctgtttatttgttgcatcgacttgatccgtctaactttccgtaattggttttatctttattagggtttttttgtctgtatttcgctgatctatattttctttatttggttgttggccttgtgaatggtgaatacattgttttattcatcaggctagttgggatatctatgtggtgtaaaaaaattgaatggggtttgttggattttggggagttcactttgatttgtgttttggagagatgttaatgtgttaatcttttttaatagagaaatggtaaggtatgaatctgtttttggaagaattgtttttaagtttatcatgtagaattagttttccgtttgttttattggggaatgtcactgaagcataaaacatttctgagaatctcatattttgtatatatgggtaattctgtatataataaagtcattaatcctatgccttacttatgcaagggataaggttcaattttttctctctctttgatttgaagtaatgttttccagggaacatcctaatgaagtctcccactgtatggtcgtcaaagatcctcctacttattgataaaattggtcatatgctaagtctttcttgagttagaaagtaccaatcaacctttatggataagtttttggcattttttacaagtaaaattgttgagcatgttaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7178" stop="8681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7478" g_stop="7513" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="8381" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="765" r_length="729" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E213264" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7478" e_stop="7513"/>
          <exon e_start="7653" e_stop="8381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGG</genome_strand>
        <mrna_strand>ATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379101" ref_strand="+" ref_description="SGN-E379101 [TUS-3-C18]">
      <seq>attggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtaccactctgtttctttatagaactttgaggattttctgtttatttgttgcatcgacttgatccgtctaactttccgtaattggttttatctttattagggtttttttgtctgtatttcgctgatctatattttctttatttggttgttggccttgtgaatggtgaatacattgttttattcatcaggctagttgggatatctatgtggtgtaaaaaaattgaatggggtttgttggattttggggagttcactttgatttgtgttttggagagatgttaatgtgttaatcttttttaatagagaaatggtaaggtatgaatctgtttttggaagaattgtttttaagtttatcatgtagaattagttttccgtttgttttattggggaatgtcactgaagcataaaacatttctgagaatctcatattttgtatatatgggtaattctgtatataataaagtcattaatcctatgccttacttatgcaagggataaggttcaattttttctctctctttgatttgaagtaatgttttccagggaacatcctaatgaagtctcccactgtatggtcgtcaaagatcctcctacttattgataaaattggtcatatgctaagtctttcttgagttagaaagtaccaatcaacctttatggataagtttttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7178" stop="8644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7478" g_stop="7513" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="8344" g_length="692"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="728" r_length="692" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E379101" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7478" e_stop="7513"/>
          <exon e_start="7653" e_stop="8344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGG</genome_strand>
        <mrna_strand>ATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210349" ref_strand="+" ref_description="SGN-E210349 [cLEC-35-J15]">
      <seq>attggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtaccactctgtttctttatagaactttgaggattttctgtttatttgttgcatcgacttgatccgtctaactttccgtaattggttttatctttattagggtttttttgtctgtatttcgctgatctatattttctttatttggttgttggccttgtgaatggtgaatacattgttttattcatcaggctagttgggatatctatgtggtgtaaaaaaattgaatggggtttgttggattttggggagttcactttgatttgtgttttggagagatgttaatgtgttaatcttttttaatagagaaatggtaaggtatgaatctgtttttggaagaattgtttttaagtttatcatgtagaattagttttccgtttgttttattggggaatgtcactgaagcataaaacatttctgagaatctcatattttgtatatatgggtaattctgtatataataaagtcattaatcctatgccttacttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7178" stop="8460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7478" g_stop="7513" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="8160" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="544" r_length="508" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E210349" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7478" e_stop="7513"/>
          <exon e_start="7653" e_stop="8160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATG</genome_strand>
        <mrna_strand>ATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689342" ref_strand="+" ref_description="SGN-E689342 [t3_tus_84_E04]">
      <seq>ggcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagaagacattacgtcagctttgttggcagcaatcaaagatgatcagttcttccattgcaacattatattcactcagcttgaccaaatggcccgctaaaacagcttttcacatgcatctgatcgactaaacttagcaactattttgccaaacaactatacaacctcagcaaatacttcaaactctcaactaatcaagggtcattatcaacaatagaatcaggcttttatgtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7181" stop="10511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7481" g_stop="7513" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="53" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="164" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="264" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="414" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="9467" i_length="90">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9468" g_stop="9694" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="641" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="9695" i_stop="10156" i_length="462">
            <donor d_prob="0.069" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10157" g_stop="10211" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="696" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E689342" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7481" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="9468" e_stop="9694"/>
          <exon e_start="10157" e_stop="10211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATC</genome_strand>
        <mrna_strand>GGCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG..........................................................................................AAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290116" ref_strand="+" ref_description="SGN-E290116 [cLET-5-B24]">
      <seq>gcaatttagggttcgctccatcatcctaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagtttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatgggtatcatggtgatcggggtaggtatcgtggccgtggtgactat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7182" stop="10653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7482" g_stop="7513" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="52" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="163" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="263" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="413" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="486" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10310" g_stop="10353" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="530" r_length="44" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E290116" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7482" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTAT</genome_strand>
        <mrna_strand>GCAATTTAGGGTTCGCTCCATCATCCTAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGTTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GGTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332636" ref_strand="+" ref_description="SGN-E332636 [cTOD-18-P15]">
      <seq>gcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagaagacattacgtcagctttgttggcagcaatcaaagatgatcagttcttccattgcaacattatattcactcagcttgaccaaatggcccgctaaaacagcttttcacatgcatctgatcgactaaacttagcaactattttgccaaacaactatacaacctcagcaaatacttcaaactctcaactaatcaagggtcattatcaacaatagaatcaggcttttatgtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatgggtatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7182" stop="10532"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7482" g_stop="7513" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="52" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="163" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="263" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="413" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="9467" i_length="90">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9468" g_stop="9694" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="640" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="9695" i_stop="10156" i_length="462">
            <donor d_prob="0.069" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="713" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="10310" g_stop="10318" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="722" r_length="9" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E332636" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7482" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="9468" e_stop="9694"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATG</genome_strand>
        <mrna_strand>GCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG..........................................................................................AAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GGTATCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332915" ref_strand="+" ref_description="SGN-E332915 [cTOD-19-I22]">
      <seq>gcaatttagggttcgctccatcatccgaaatggctgattctccacgcaaaaggtattcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagaagacattacgtcagctttgttggcagcaatcaaagatgatcagttcttccattgcaacattatattcactcagcttgaccaaatggcccgctaaaacagcttttcacatgcatctgatcgactaaacttagcaactattttgccaaacaactatacaacctcagcaaatacttcaaactctcaactaatcaagggtcattatcaacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="7182" stop="9977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7482" g_stop="7513" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7653" g_stop="7672" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="52" r_length="20" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8613" g_stop="8723" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="163" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="263" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="413" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9378" i_stop="9467" i_length="90">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9468" g_stop="9677" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="623" r_length="210" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E332915" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7482" e_stop="7513"/>
          <exon e_start="7653" e_stop="7672"/>
          <exon e_start="8613" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="9468" e_stop="9677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGGAGAACACACTAACATAGCCTTAGCGATGCATTTCTGTTTTCTTTTTGCACGCAAATAGATCTCCAACGGATTTTCTTTTAAGCCACTGTCTTTAGTAGTATTAGTTGACATAGAAATTTTATGAGCTACATATACTTGAAAAAGATACCATCATTACTCGAGGAACCATCTTTAAAGACATGTGGTTGGTGTTAATAAACTGGTTCAATGTTGTACTTATTGGACTCCCAGGTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAAT</genome_strand>
        <mrna_strand>GCAATTTAGGGTTCGCTCCATCATCCGAAATG...........................................................................................................................................GCTGATTCTCCACGCAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG..........................................................................................AAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290120" ref_strand="+" ref_description="SGN-E290120 [cLET-5-D8]">
      <seq>ttcccgctctccttcaccttgggaagaaaagtcaagatctcgctctcgatccccaactagatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagtttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="8316" stop="10638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8616" g_stop="8723" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="208" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="358" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="431" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10310" g_stop="10338" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="460" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E290120" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8616" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10338"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGT</genome_strand>
        <mrna_strand>TTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGTTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E731096" ref_strand="+" ref_description="SGN-E731096 [LA26AE06]">
      <seq>gatcacagtcaaggccaagaggaagatcaaggtccagaagtcatggaagggctgaagatactaatcctggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggagggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacggtggagaagcaatcaaagatgatcagttcttccattgcaacattatattcactcagcttgaccaaatggcccgctaaaacagcttttcacatgcatctgatcgactaaacttagcaactattttgccaaacaactatacaacctcagcaaatacttcaaactctcaactaatcaagggtcattatcaacaatagaatcaggcttttatgtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgtggccgtggtgactatgggtaccgaagatctccaagacgttctccatatagaggtgggcgagattattctcccagacactctccatatagaggtgggcgagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgaaaggactacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="8375" stop="10822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8675" g_stop="8723" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.531" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="149" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="299" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9378" i_stop="9494" i_length="117">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9495" g_stop="9694" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="499" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9695" i_stop="10156" i_length="462">
            <donor d_prob="0.069" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="572" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10310" g_stop="10522" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="784" r_length="212" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E731096" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8675" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="9495" e_stop="9694"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACC</genome_strand>
        <mrna_strand>GATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG.....................................................................................................................CAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGG-ACTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E409436" ref_strand="+" ref_description="SGN-E409436 [PPI-14-G7]">
      <seq>ggaagatccaggtccagaagtcatggaagggctgaagaaactaatcccggaaacacactctatgtgactggattatcttcaagggtcactcaaagggatcttgaagagcatttctcaaaggaaggaaaggtgaagtcagcttttctggttgtggagccccgttctcgcatctctcgtggttttgctttcataacaatggatagtcttgaggatgccaatcgctgcattaagcaccttaatcagtccgtccttgaaggccggtccataacagtggagaagtctcgtagaaaacgcccaaggactccaacacctggtcattatcttgggcttcatcagagcggaaggggtgatggttatcatggtgatcgtggtangtatcgtggccgtggtgactatgggtaccgaagatctccaagacgttctccatatagaggtgggagagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgaaagaactaccctcgtggntatagataagggggtttcacaaggcacatgcggtttcctccctcagcatgaaactgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="8395" stop="10848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8695" g_stop="8723" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88">
            <donor d_prob="0.962" d_score="0.00"/>
            <acceptor a_prob="0.531" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8812" g_stop="8911" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="129" r_length="100" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316">
            <donor d_prob="0.875" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9228" g_stop="9377" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="279" r_length="150" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10157" g_stop="10229" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="352" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10310" g_stop="10390" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="433" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10391" i_stop="10429" i_length="39">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10430" g_stop="10548" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="551" r_length="118" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E409436" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E409436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8695" e_stop="8723"/>
          <exon e_start="8812" e_stop="8911"/>
          <exon e_start="9228" e_stop="9377"/>
          <exon e_start="10157" e_stop="10229"/>
          <exon e_start="10310" e_stop="10390"/>
          <exon e_start="10430" e_stop="10548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGATCAAGGTCCAGAAGTCATGGAAGGTATGAGTGGAACTTTAGTTTTACTTCACCTTCTTTATGTTAACAGCTTCGTTTCGGTTTCTCAAAATTTCCTCCATGACTTGATTAGGGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAGGTTGGTTTCTGGTTTACGTATAAGCAAGTTGTTTTCTGGTTCTGTTTCTGCCATGATTTGGTGCTCATACTGCATACCAACATTCTCTCTCGTTCAAAATAATTTGTGTTGTATCTACTCTTTATAATGGAAATTTTTCATTTATGATGATTATCTTAGAAACATCTAGTTTTCATTTAAGTTTATTGTATGAGCAAAGTCTTGTCAATGCATTTGCCAAGATATTGATGTATTGTGGAATTTTGGCTGGATTCTTTTCTCATTGTTCATACTTTAAAGCTTGCTATTGAAGTTTCTTATACTTTCTTTTGATTAGGTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATGGTATCTCATCCTGGTGTTGGTTCTATCTCCATCTTTTAGCTGTTATAAGACGTGCGAAAATATTTAAGCTGCTATCCTGTGTGACTAGTGTCATATCCTATTTCTTAGTAATGGACATCGTTGTGTGCTTGTGCCACCTTCAGTTTTGCAGAGGTTTTTCGAGGAGACTTGCTTTTTTTTGGCACAGATTAGTTGAATGTTATATTCTTCCTTTAGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTC</genome_strand>
        <mrna_strand>GGAAGATCCAGGTCCAGAAGTCATGGAAG........................................................................................GGCTGAAGAAACTAATCCCGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAAGGAAAG............................................................................................................................................................................................................................................................................................................................GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACAGTGGAGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGTAGAAAACGCCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGGAAGGGGTGATG................................................................................GTTATCATGGTGATCGTGGTANGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAG.......................................GTGGGAGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAA-GAACTACCCTCGTGGNTATAGATAAGGGGGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E379886" ref_strand="+" ref_description="SGN-E379886 [TUS-3-C18](-)">
      <seq>aggagtgcatttggtgattctcttttctttggatgttagcatcataggttatgatttcatagaattacaaatatttctgtttttttttgttgtgaagagaacacccgatattagcaatttcatattcttccattacaaggaattcattctctagaatacattatctggtcgagataacccatttgttcttgatgtaaatcacatatgttcagatttcacatattgagatgatctattttgtttttcagtctcgtagaaaacggccaaggactccaacacctggtcattatcttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgtggccgtggtgactatgggtaccgaagatctccaagacgttctccatatagaggtgggcgagattattctcccagacactctccatatagaggtgggcgagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgaaaggaactaccctcgtggttatagataagtgggtttcgtcctcagctatggaaactgcttttgtaaggatctataagtttgatgtggactagtcttgatgttaaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="9609" stop="10919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9909" g_stop="10229" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10310" g_stop="10619" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="631" r_length="310" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E379886" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9909" e_stop="10229"/>
          <exon e_start="10310" e_stop="10619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAG</genome_strand>
        <mrna_strand>AGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395674" ref_strand="+" ref_description="SGN-E395674 [TUS-17-I8](-)">
      <seq>ttttttttttttgttggaagagaacacccgatattagcaatttcatttttttccattacaaggaattcattctttagaatacattatttggtcgagataacccatttgttcttgatgtaaatcacatatgttcagatttcacatattgagatgatttattttgtttttcagtttcgtagaaaacggccaaggactccaacacctggtcatttttttgggcttcatcagagcgcaaggggtgatggttatcatggtgatcggggtaggtatcgtggccgtggtgactatgggtaccgaagatttccaagacgttttccatatagaggtgggggagattattttcccagacactctccatatagaggtgggggagattattttcctagacgctccccttatgctggaaggtcgagacgtgcgcgatcccggtcatattttccttatgaaaggaactaccctcgtggttatagataagtgggttttgtcctcagctatggaaactgcttttgtaaggatttataagtttgatgtggactagttttgatgttaaagagtactggttaatgaatgtatgtttgggttaccccttgaatgtggattttttgtaatttttttgaaactttatgatgtatgtattttcttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="9686" stop="61920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9985" g_stop="10229" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10310" g_stop="10709" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="644" r_length="400" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10710" i_stop="11762" i_length="1053">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11763" g_stop="11796" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="678" r_length="34" r_score="0.706"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E395674" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9985" e_stop="10229"/>
          <exon e_start="10310" e_stop="10709"/>
          <exon e_start="11763" e_stop="11796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATGGTAAGCTTCTGATGCTATGTAAGTTCCTATTCTATTTTTGATTTGTGGAATCTCTAAAGTACTCATTGCTTTGGTCAAAGGTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTCATTTTGTTGTCTTCATGGTCGTGACATCGTTTACGATATCTGTTGGTTCATTCTTACATGTTGTTTAGCAACTTTCTGGCTCGTGGCTTTATCATTGTCAAGATCCTCTCTTTTCTTGCAACTTGGATATTAGTTTGAAGTGAAAATGTACACTTCACCCAGTAATTTGCTTAATGGTATTTTCTTGAACAAAATGGAGTAGCTGAGTTTATTAGATATTTGTTGATGACTTGATTTTACAAGATATGACGTTCTTGGAGATGTGTCGTGATAAAGTAGCCATGTTCGTTATTACAAGGTGGTCCAACCCCAACATGACATTTGACTCATTCTAGTACAAACACGAGGGCCTACGAGCTTATCAAGTTGTTAAAAGTAGGTTCTTTAGTTAATTAGACATCCAATTATAAAAAAAGAGTAACAAATGGATAAGAATTAAGATGACTAGACACGGAACAAGCTTCCAAATGTCAACAATAATATCCTAGATTTTCTAATGAGCACGTGAAGATATTTTACGAGTTAGTGTAAGTATTATATTTTGGTAATTGTTAATAACAAACGTTGAAAAGAGAATGTGCCTCAATAATCATGAATTGGTATGTGGATACATAGACTATTCACTAGTCTTACATATATGACGTTTTCTTCTTCTTCTTTATACTCATACATATGACCTCACTAGTCTTACATATATGACTTTTTCTTCTTCTTCTTTATACACATACATATGACCTAGTAGTAAGAGCTTTGACTATTTTTGTGCAAAAATTTAAAGGGAGACCCTTGTGAAGTTAAATATTGCTAGGTGAACAGAAGGGTTAGGAAAAATTCTCCAACAAAATACGAGTGTTAGGAGCATGCGATGCACGTTTTGGCGCACTCTTACCTTAAGGCCAACCATTTCCTTCCACGTGTTCTATAACAATTAACAGACAACTACTAAGTAATCATGTTTGATGATTGAATTTAAAGTTTATTTTCAAAAAATAAAGTAATTTAAAATTAAAACTTTAGTGATGGACTAAATGCTACTCCCCCAAAAAAAAAAAGTAGTATCTACCTAAAAAAAAAAAA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTGTTG-GAAGAGAACACCCGATATTAGCAATTTCATTTTTTTCCATTACAAGGAATTCATTCTTTAGAATACATTATTTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATTTATTTTGTTTTTCAGTTTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTTTTTTGGGCTTCATCAGAGCGCAAGGGGTGATG................................................................................GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATTTCCAAGACGTTTTCCATATAGAGGTGGGGGAGATTATTTTCCCAGACACTCTCCATATAGAGGTGGGGGAGATTATTTTCCTAGACGCTCCCCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTTTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTTGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATTTATAAGTTTGATGTGGACTAGTTTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTTTGGGTTACCCCTTGAATGTGGATTTTTTGTAATTTTTTTGAAACTTTATGATGTATGTATTTTCTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228775" ref_strand="-" ref_description="SGN-E228775 [cLEL-29-H21](-)">
      <seq>tttttttttttttttttttttttgacaagcaacgaaagagaatacatacatcataaagtttcagaaagattacagataatccacattcaaggtgtaacccagacatacattcattaaccagtactctttaacatcaagactagtccacatcaaacttatagatccttacaaaagcagtttccatagctgaggacgaaacccacttatctataaccacgagggtagttcctttcataaggagaatatgaccgggatcgcgcacgtctcgaccttccagcataaggtgagcgtctaggagaataatctcgcccacctctatatggagagtgtctgggagaataatctcgcccacctctatatggagaacgtcttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="61920" stop="10069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11806" g_stop="11783" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11782" i_stop="10719" i_length="1064">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10718" g_stop="10369" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="374" r_length="350" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E228775" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228775" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="11806" e_stop="11783"/>
          <exon e_start="10718" e_stop="10369"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTAATGATTTTTTTTTTTTAGGTAGATACTACTTTTTTTTTTTGGGGGAGTAGCATTTAGTCCATCACTAAAGTTTTAATTTTAAATTACTTTATTTTTTGAAAATAAACTTTAAATTCAATCATCAAACATGATTACTTAGTAGTTGTCTGTTAATTGTTATAGAACACGTGGAAGGAAATGGTTGGCCTTAAGGTAAGAGTGCGCCAAAACGTGCATCGCATGCTCCTAACACTCGTATTTTGTTGGAGAATTTTTCCTAACCCTTCTGTTCACCTAGCAATATTTAACTTCACAAGGGTCTCCCTTTAAATTTTTGCACAAAAATAGTCAAAGCTCTTACTACTAGGTCATATGTATGTGTATAAAGAAGAAGAAGAAAAAGTCATATATGTAAGACTAGTGAGGTCATATGTATGAGTATAAAGAAGAAGAAGAAAACGTCATATATGTAAGACTAGTGAATAGTCTATGTATCCACATACCAATTCATGATTATTGAGGCACATTCTCTTTTCAACGTTTGTTATTAACAATTACCAAAATATAATACTTACACTAACTCGTAAAATATCTTCACGTGCTCATTAGAAAATCTAGGATATTATTGTTGACATTTGGAAGCTTGTTCCGTGTCTAGTCATCTTAATTCTTATCCATTTGTTACTCTTTTTTTATAATTGGATGTCTAATTAACTAAAGAACCTACTTTTAACAACTTGATAAGCTCGTAGGCCCTCGTGTTTGTACTAGAATGAGTCAAATGTCATGTTGGGGTTGGACCACCTTGTAATAACGAACATGGCTACTTTATCACGACACATCTCCAAGAACGTCATATCTTGTAAAATCAAGTCATCAACAAATATCTAATAAACTCAGCTACTCCATTTTGTTCAAGAAAATACCATTAAGCAAATTACTGGGTGAAGTGTACATTTTCACTTCAAACTAATATCCAAGTTGCAAGAAAAGAGAGGATCTTGACAATGATAAAGCCACGAGCCAGAAAGTTGCTAAACAACATGTAAGAATGAACCAACAGATATCGTAAACGATGTCACGACCATGAAGACAACAAAATGACAAGCAACGAAAGAGAATACATACATCATAAAGTTTCAGAAAGATTACAGATAATCCACATTCAAGGTGTAACCCAGACATACATTCATTAACCAGTACTCTTTAACATCAAGACTAGTCCACATCAAACTTATAGATCCTTACAAAAGCAGTTTCCATAGCTGAGGACGAAACCCACTTATCTATAACCACGAGGGTAGTTCCTTTCATAAGGAGAATATGACCGGGATCGCGCACGTCTCGACCTTCCAGCATAAGGTGAGCGTCTAGGAGAATAATCTCGCCCACCTCTATATGGAGAGTGTCTGGGAGAATAATCTCGCCCACCTCTATATGGAGAACGTCTTGG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGCAACGAAAGAGAATACATACATCATAAAGTTTCAGAAAGATTACAGATAATCCACATTCAAGGTGTAACCCAGACATACATTCATTAACCAGTACTCTTTAACATCAAGACTAGTCCACATCAAACTTATAGATCCTTACAAAAGCAGTTTCCATAGCTGAGGACGAAACCCACTTATCTATAACCACGAGGGTAGTTCCTTTCATAAGGAGAATATGACCGGGATCGCGCACGTCTCGACCTTCCAGCATAAGGTGAGCGTCTAGGAGAATAATCTCGCCCACCTCTATATGGAGAGTGTCTGGGAGAATAATCTCGCCCACCTCTATATGGAGAACGTCTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E229063" ref_strand="+" ref_description="SGN-E229063 [cLEL-29-H21](-)">
      <seq>tctcccagacactctccatatagaggtgggcgagattattctcctagacgctcaccttatgctggaaggtcgagacgtgcgcgatcccggtcatattctccttatgaaaggaactaccctcgtggttatagataagtgggtttcgtcctcagctatggaaactgcttttgtaaggatctataagtttgatgtggactagtcttgatgttaaagagtactggttaatgaatgtatgtctgggttaccccttgaatgtggattatctgtaatctttctgaaactttatgatgtatgtattctctttcgttgcttgtccaaaaaccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="10105" stop="11019"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10405" g_stop="10719" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="324" polyA_stop="338"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E229063" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10405" e_stop="10719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTC</genome_strand>
        <mrna_strand>TCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACCCCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745811" ref_strand="+" ref_description="SGN-E745811 [GI|47105059]">
      <seq>gaacaacaaatatttttgtcttctccacctaatttattttatccctaaatccccccctttttttttttcctcctctctctgtaaacccacattgaatttattgtctaacaatgctcggcgttgagttaaggatctccaccgtcgccggagttttcaccgatctaccggaaacaagtcgccggagtgccagctggaactgtaactcctccattggaaatatctcatatcatctctcttccagaaataggcattgtagaaagtccagattcatggtaatctgtagcaagtcatcacgcggaagctttaatcggaaatctaatcagagtgatgaaccgggtgatgattatattgaagctgtcgttctcgtttcagagactatgaagcactacaaaatgcatatgggtggatttcaagaagaaacaagatggcactcatctgctcagctgattccctcttcttttcatcctaaggatcgtattgctaatgcatcatctttagggacaggatttcttcgccgtttcaagaatccaactatttttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagattcattgcatgaggaggagactggggattgccccgacgagttcctgcttttgaggaatctattgttgaaatctggctatgaagttaaaatggtgaagattacagaaagagtgactagtacttattttgccagaatatttttccacaaggcaggggaaaaagatattattagtgtggatgctcgtccctccgatgccattaatgttgccagaagatgtaaggcaccaatatttgtgaataagcaaattgtcttgactgatgcaactagaataggttatggaatggaccgatctagcagaattaagtccacctatgatgtattactagatagtgcatcagatggccccgatttactttctgaagaacttagtatgttgagaaatatgaacttagcagtgaatgaggagaggtacaatgatgcagctgtgtggaaggacaaactgatgagacttcgtgagttcaagacatgagctctaaaatctttctccagaaataaaatgtaaatattccttctggattgatggcagctatgacaccgcgctatatttcaacttttcagtatcacattaacaaaagtttggaggaatcaataatcttcagggaagttcaagtattattattgtgtacatgttccccttgctgtagaaatctcgaaaagtaaatgccttacctatgttgtgtcagttggggttttatctagctaacccgacaatgcaacctctaggtaaaatgtatatagtttgattgttgctgaagaatatgtgaactatgtgatagtagcatgtgcgcattcaagatgaactccttccatgccaacaatagtagcactaaactttcaaaagaagagagatgagatcaagctttgaagtgggtagctgaaagaaagctgtctgtgaaggtcaggaaagacgagtttgtttagtgcaaatcaacaaatattgcaaagatggcacgacttaaaagccatgtggtgatatattaccatgacacacagatggtgtctttccttttcctctcatcaccactcatagatagttgtatataagttaagagaaggggctggagtgactatgctcaagttatatgttgtacatttgattccatccatattggcagcatttattatatccagactccagattattagaagaattggagatttaggaatattgtaaagtaataattaccagaagggggttctttgccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="12196" stop="61919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12495" g_stop="12864" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="372" r_length="372" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13985" g_stop="14197" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="585" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14293" g_stop="14345" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="638" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.519" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14444" g_stop="14500" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="695" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15016" g_stop="15081" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="696" r_stop="761" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15175" g_stop="15246" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="833" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="15247" i_stop="15649" i_length="403">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="15650" g_stop="15759" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="834" r_stop="943" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="15760" i_stop="15833" i_length="74">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.753" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="15834" g_stop="15925" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="944" r_stop="1035" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="15926" i_stop="16027" i_length="102">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="16028" g_stop="16094" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1036" r_stop="1102" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="16095" i_stop="16283" i_length="189">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="16284" g_stop="17014" g_length="731"/>
          <reference_exon_boundary r_type="cDNA" r_start="1103" r_stop="1833" r_length="731" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E745811" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1831</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12495" e_stop="12864"/>
          <exon e_start="13985" e_stop="14197"/>
          <exon e_start="14293" e_stop="14345"/>
          <exon e_start="14444" e_stop="14500"/>
          <exon e_start="15016" e_stop="15081"/>
          <exon e_start="15175" e_stop="15246"/>
          <exon e_start="15650" e_stop="15759"/>
          <exon e_start="15834" e_stop="15925"/>
          <exon e_start="16028" e_stop="16094"/>
          <exon e_start="16284" e_stop="17014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAACAAATATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCC--TTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAGGTATGGAAAATTACCGTTTTGCCCTTTTCTCCGATATTTTTTTGTTAGAGAAATACTGATGCAGGTAATATATTCTTCATGAACATTACTTTGTTGAAATGTATGAAAAAGATCAGATTTTTCTCTCTATGCTTTTGCTTTTTTAATCAATGTAGCTCAACTGCTATTAGTAAGTGAAAAATGGAAAATTGGTTGCTTAGCTGCTAGCTCCACAGACTTTGAACAAGTTGCTTTCCCAGTAACATTTGATGATCCTGTACGAATTAGTCTAAAAAACCAATGTTATGGAATGGAGGGACCTAAAATCTTTGCTCCGCCTCTCCAAAAAATGTATTATCACACGTGGATCATTCAAAAAGAAACTACTTTTGGAGTATCTGATGCACACATTTTAATCATTTCAATTTGTATAAAAAATGACTTGAGATGGAAAATCATGCGCTCTACAATAATTTGAGAAACAAAATAAGTCAATTGATAATTTATATCTTGAATACTGAATCACAGAATCAGTTGAGTTCCCTATTTGATTCATATGATTCCATTTTGGTTTAGTCAGGTCTATTTCATGTGGTACCAAATGAATATGTATATGTGGATTTCTCTGCTTCCATTATGTAAGTTGTGACATTGGTCCTGGTAGAATTTTCATATTTTAGAAATTTCTACCAAGTCCTTTTCTATCACCTTTTGGAGGTCTGTTCCAGACATGACCAAACTATCACAGGCTCTCTCTCTTTATTCTCTGCCTGTGCTACTTGCATCTTTTTTTATTATTCTTCTCCAATATTCTACGCTTGCACATCTGTCTTATTATCCTTATTCATCCATCTTAATATCCATATGTCAATATTTATTCCGTGGATGTGATGGGACATAGGGGCTCAGCACTCAATCTTAATATAATATTGCTGGTCTAGTACTTATATAAAAATAACCTTTCACTTTGTTAGGCATCTTTTTATTGCATAGCCACTCATTCATCTCAAATACTTAAGTTATGTGTACTTTGAAATCTAATTGCTTATCACATTTTATCTGTAGTCTTTCTACTGTATATTAGTATTTTCTACCCTGCATCTGAGGCTAAGCATGTTTACCAATGCTGCAATGACTATAGAGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGGGTAATTTTTTTCAAGATTTTGAGAACGGATTTTCTGACTACTTTTCCTTATCTTTCTCTTAACATTTCTTTGAGATGCTGACGTTGGGCCTGCTGCAGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAAGTATGTCAATACCACTTTTTATCTATTTCATCATATGCATCCTTTCTCAATCTTGATTTTTTAATTATAAAGTAATATCAATCTTGATTTTAGCCATGTTTACTTTTAGCTTCTCTTTTTGAATTTGTTACCACATTCCCTGATATTAGAAACCTTTGGTTTTCAGAAGCATGTCATATATTCAAATGTTCATATTTTTAAGTTTTATATATTGAAATGAAACTTTAGGAGGCGGCCATTAACTCTTTCTGCTTATCTTTTAGCTGCCAGTTCATGATACTAATATGCTTTTACCAAGTATCATGAAAAGTTCTTACTGGTTACTTTTACTTGTAACATGGCAAGTGAGCAGGAGGCGGCTACTCCTCACTTACTTCTACGTGTTTGTAAGATGTAACACTTCCTTTGAGATGTGATCACCTTTAAATTGGGGAAACAGACACAGACACCGCGCCTTTAATTGTTGTTTGAAGTGCTAGTCTTACTTTCTTAATTTGGTGATGTATCATTTCTAGGTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAGGTATGTTCAAAATACTTTGTTCGTAGATTGAAAATATACTCCTACTTCTGTAATTGCATTTAATCTGAATTTAACATTTTTGATAATACCCAGGCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAGGTATTGTTCTTATGGGACTTTGAGATTCAAGTTTGATAATCAATCGCTTCATATAAATTGCTTACCATTGTAGAAAACATTATGTCTCCTGACTGTTTTCCATTTGACCTTTTTCCTAGCATCCTGAGATGAAAAGATTGATCTCTCTTCCTTGAGCCCAGAGTCTATCTGAAACAGCCTCTCTACCTTCCAAGGTAGGGGTAAGGTCGAATACACACGATCTCACTAGACCTACTTGTGAGATTCATAAGGACTTGTGGTAAAGTTTTATGTGTATGATCAACTTCTTTTCAGTTTTAGCTCCTGTTAGAATCAGTCTTATTAATCTCTCTTGAGCTGTAATGCCCCACCTACAAATTTTGACAGCCGTTATCTGTAATTGAGCTTGTTCTGGTTTATGCAGGCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAGGTTGGTCTCTTTTCTCTCCTATGTACATTTCTTTGGACTTTCTCCAAACTTAAGACTAATTCTGTTTGGCGCAGTGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAGGTACATCAAAGTAAACTTATAATTATTTTGGTGGAAGCATCTGCTATAGTTTTTCTGTAATTAATTTGTTGACACATCACCTATATTTTCTGGTTCCTGCAGCTGTGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTAAAATCTTTCTCCAGGTACATCTTTCTACTGTTCAATGAAAGAGTTCTTTGATTACATTAATAGTGTCATGGAATGAGAATATTTATATTATGTTGGATTATGGATATAGTATTCATCTGGCTCTTGAAAATTTACATTATTCTACAATGCACATCTTTCAAATTTTGCTGCTATCCGTTGAAACTCTCTCCTTGTCTTTTCAGAAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACCGCGCTATATTTCAACTTTTCAGTATCACATTAACAAAAGTTTGGAGGAATCAATAATCTTCAGGGAAGTTCAAGTATTATTATTGTGTACATGTTCCCCTTGCTGTAGAAATCTCGAAAAGTAAATGCCTTACCTATGTTGTGTCAGTTGGGGTTTTATCTAGCTAACCCGACAATGCAACCTCTAGGTAAAATGTATATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAACCTTTCAAG</genome_strand>
        <mrna_strand>GAACAACAAATATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG..................................................................................................GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG.............................................................................................GCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAG..........................................................................TGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAG......................................................................................................CTGTGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTAAAATCTTTCTCCAG.............................................................................................................................................................................................AAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACCGCGCTATATTTCAACTTTTCAGTATCACATTAACAAAAGTTTGGAGGAATCAATAATCTTCAGGGAAGTTCAAGTATTATTATTGTGTACATGTTCCCCTTGCTGTAGAAATCTCGAAAAGTAAATGCCTTACCTATGTTGTGTCAGTTGGGGTTTTATCTAGCTAACCCGACAATGCAACCTCTAGGTAAAATGTATATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGCCAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322573" ref_strand="+" ref_description="SGN-E322573 [cTOB-26-J14]">
      <seq>tatttttgtcttctccacctaatttattttatccctaaatccccccctttttttttcctcctctctctgtaaacccacattgaatttattgtctaacaatgctcggcgttgagttaaggatctccaccgtcgccggagttttcaccgatctaccggaaacaagtcgccggagtgccagctggaactgtaactcctccattggaaatatctcatatcatctctcttccagaaataggcattgtagaaagtccagattcatggtaatctgtagcaagtcatcacgcggaagctttaatcggaaatctaatcagagtgatgaaccgggtgatgattatattgaagctgtcgttctcgtttcagagactatgaagcactacaaaatgcatatgggtggatttcaagaagaaacaagatggcactcatctgctcagctgattccctcttcttttcatcctaaggatcgtattgctaatgcatcatctttagggacaggatttcttcgccgtttcaagaatccaactatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="12205" stop="14450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12505" g_stop="12864" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13985" g_stop="14150" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="526" r_length="166" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E322573" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12505" e_stop="12864"/>
          <exon e_start="13985" e_stop="14150"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAGGTATGGAAAATTACCGTTTTGCCCTTTTCTCCGATATTTTTTTGTTAGAGAAATACTGATGCAGGTAATATATTCTTCATGAACATTACTTTGTTGAAATGTATGAAAAAGATCAGATTTTTCTCTCTATGCTTTTGCTTTTTTAATCAATGTAGCTCAACTGCTATTAGTAAGTGAAAAATGGAAAATTGGTTGCTTAGCTGCTAGCTCCACAGACTTTGAACAAGTTGCTTTCCCAGTAACATTTGATGATCCTGTACGAATTAGTCTAAAAAACCAATGTTATGGAATGGAGGGACCTAAAATCTTTGCTCCGCCTCTCCAAAAAATGTATTATCACACGTGGATCATTCAAAAAGAAACTACTTTTGGAGTATCTGATGCACACATTTTAATCATTTCAATTTGTATAAAAAATGACTTGAGATGGAAAATCATGCGCTCTACAATAATTTGAGAAACAAAATAAGTCAATTGATAATTTATATCTTGAATACTGAATCACAGAATCAGTTGAGTTCCCTATTTGATTCATATGATTCCATTTTGGTTTAGTCAGGTCTATTTCATGTGGTACCAAATGAATATGTATATGTGGATTTCTCTGCTTCCATTATGTAAGTTGTGACATTGGTCCTGGTAGAATTTTCATATTTTAGAAATTTCTACCAAGTCCTTTTCTATCACCTTTTGGAGGTCTGTTCCAGACATGACCAAACTATCACAGGCTCTCTCTCTTTATTCTCTGCCTGTGCTACTTGCATCTTTTTTTATTATTCTTCTCCAATATTCTACGCTTGCACATCTGTCTTATTATCCTTATTCATCCATCTTAATATCCATATGTCAATATTTATTCCGTGGATGTGATGGGACATAGGGGCTCAGCACTCAATCTTAATATAATATTGCTGGTCTAGTACTTATATAAAAATAACCTTTCACTTTGTTAGGCATCTTTTTATTGCATAGCCACTCATTCATCTCAAATACTTAAGTTATGTGTACTTTGAAATCTAATTGCTTATCACATTTTATCTGTAGTCTTTCTACTGTATATTAGTATTTTCTACCCTGCATCTGAGGCTAAGCATGTTTACCAATGCTGCAATGACTATAGAGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTT</genome_strand>
        <mrna_strand>TATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623397" ref_strand="+" ref_description="SGN-E623397 [88489]">
      <seq>tttttcttttcccacctaatttattttatccctaaatcctccttttttctcctctctctgtaaacccacattgaatttatcgtctaacaatgctcggcgttgagttaaggatctctaccgtcgccggagttttgacggatctaccggaaacaagtcaccggagtgccagctggaactgtaactcctcgattcgaaatatatcatatcatctctcttccagaaatagacattgtagaaagtctagattcatggttatctgtagcaagtcatcacgcggaagctttaatcggaaatctaatcagagtgatgaaccgggtgatgattatattgaagctgtcgtccttgtttcagagactatgaagcactacaaaatgcatatgggtggatttcaagaagaaacaagatggcactcatctgctcacctgattccctcttctttcacctaaggtcgtatcgctgatgctcatcttagggacggttcttcgccgttcaagaatccaactattttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="12250" stop="14621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12507" g_stop="12864" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13985" g_stop="14197" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="554" r_length="203" r_score="0.939"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14293" g_stop="14321" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="555" r_stop="583" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E623397" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.029" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12507" e_stop="12864"/>
          <exon e_start="13985" e_stop="14197"/>
          <exon e_start="14293" e_stop="14321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAGGTATGGAAAATTACCGTTTTGCCCTTTTCTCCGATATTTTTTTGTTAGAGAAATACTGATGCAGGTAATATATTCTTCATGAACATTACTTTGTTGAAATGTATGAAAAAGATCAGATTTTTCTCTCTATGCTTTTGCTTTTTTAATCAATGTAGCTCAACTGCTATTAGTAAGTGAAAAATGGAAAATTGGTTGCTTAGCTGCTAGCTCCACAGACTTTGAACAAGTTGCTTTCCCAGTAACATTTGATGATCCTGTACGAATTAGTCTAAAAAACCAATGTTATGGAATGGAGGGACCTAAAATCTTTGCTCCGCCTCTCCAAAAAATGTATTATCACACGTGGATCATTCAAAAAGAAACTACTTTTGGAGTATCTGATGCACACATTTTAATCATTTCAATTTGTATAAAAAATGACTTGAGATGGAAAATCATGCGCTCTACAATAATTTGAGAAACAAAATAAGTCAATTGATAATTTATATCTTGAATACTGAATCACAGAATCAGTTGAGTTCCCTATTTGATTCATATGATTCCATTTTGGTTTAGTCAGGTCTATTTCATGTGGTACCAAATGAATATGTATATGTGGATTTCTCTGCTTCCATTATGTAAGTTGTGACATTGGTCCTGGTAGAATTTTCATATTTTAGAAATTTCTACCAAGTCCTTTTCTATCACCTTTTGGAGGTCTGTTCCAGACATGACCAAACTATCACAGGCTCTCTCTCTTTATTCTCTGCCTGTGCTACTTGCATCTTTTTTTATTATTCTTCTCCAATATTCTACGCTTGCACATCTGTCTTATTATCCTTATTCATCCATCTTAATATCCATATGTCAATATTTATTCCGTGGATGTGATGGGACATAGGGGCTCAGCACTCAATCTTAATATAATATTGCTGGTCTAGTACTTATATAAAAATAACCTTTCACTTTGTTAGGCATCTTTTTATTGCATAGCCACTCATTCATCTCAAATACTTAAGTTATGTGTACTTTGAAATCTAATTGCTTATCACATTTTATCTGTAGTCTTTCTACTGTATATTAGTATTTTCTACCCTGCATCTGAGGCTAAGCATGTTTACCAATGCTGCAATGACTATAGAGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGAT</genome_strand>
        <mrna_strand>TTTTTCTTTTC-CCACCTAATTTATTTTATCCCTAAAT--CCTCC---TTTTTT-CTCCTCTCTCTGTAAACCCACATTGAATTTATCGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCTACCGTCGCCGGAGTTTTGACGGATCTACCGGAAACAAGTCACCGGAGTGCCAGCTGGAACTGTAACTCCTCGATTCGAAATATATCATATCATCTCTCTTCCAGAAATAGACATTGTAGAAAGTCTAGATTCATGGTTATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTCCTTGTTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCACCTGATTCCCTCTTC-TTTCA-CCTAAGG-TCGTATCGCTGATGC-TCATC-TTAGGGAC-GG--TTCTTCGCCG-TTCAAGAATCCAACTA-TTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E539608" ref_strand="+" ref_description="SGN-E539608 [TUS-59-H7]">
      <seq>tttgtcttctccacctaatttattttatccctaaatccccccctttttttttcctcctctctctgtaaacccacattgaatttattgtctaacaatgctcggcgttgagttaaggatctccaccgtcgccggagttttcaccgatctaccggaaacaagtcgccggagtgccagctggaactgtaactcctccattggaaatatctcatatcatctctcttccagaaataggcattgtagaaagtccagattcatggtaatctgtagcaagtcatcacgcggaagctttaatcggaaatctaatcagagtgatgaaccgggtgatgattatattgaagctgtcgttctcgtttcagagactatgaagcactacaaaatgcatatgggtggatttcaagaagaaacaagatggcactcatctgctcagctgattccctcttcttttcatcctaaggatcgtattgctaatgcatcatctttagggacaggatttcttcgccgtttcaagaatccaactatttttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagattcattgcatgaggaggagactggggattgccccgacgagttcctgcttttgaggaatctattgttgaaatctggctatgaagttaaaatggtgaagattacagaaagagtgactagtacttattttgccagaatatttttccacaaggcaggggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="12209" stop="15386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12509" g_stop="12864" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13985" g_stop="14197" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="569" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14293" g_stop="14345" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="622" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.519" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14444" g_stop="14500" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="679" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15016" g_stop="15081" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="680" r_stop="745" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15175" g_stop="15185" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="746" r_stop="756" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E539608" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12509" e_stop="12864"/>
          <exon e_start="13985" e_stop="14197"/>
          <exon e_start="14293" e_stop="14345"/>
          <exon e_start="14444" e_stop="14500"/>
          <exon e_start="15016" e_stop="15081"/>
          <exon e_start="15175" e_stop="15185"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAGGTATGGAAAATTACCGTTTTGCCCTTTTCTCCGATATTTTTTTGTTAGAGAAATACTGATGCAGGTAATATATTCTTCATGAACATTACTTTGTTGAAATGTATGAAAAAGATCAGATTTTTCTCTCTATGCTTTTGCTTTTTTAATCAATGTAGCTCAACTGCTATTAGTAAGTGAAAAATGGAAAATTGGTTGCTTAGCTGCTAGCTCCACAGACTTTGAACAAGTTGCTTTCCCAGTAACATTTGATGATCCTGTACGAATTAGTCTAAAAAACCAATGTTATGGAATGGAGGGACCTAAAATCTTTGCTCCGCCTCTCCAAAAAATGTATTATCACACGTGGATCATTCAAAAAGAAACTACTTTTGGAGTATCTGATGCACACATTTTAATCATTTCAATTTGTATAAAAAATGACTTGAGATGGAAAATCATGCGCTCTACAATAATTTGAGAAACAAAATAAGTCAATTGATAATTTATATCTTGAATACTGAATCACAGAATCAGTTGAGTTCCCTATTTGATTCATATGATTCCATTTTGGTTTAGTCAGGTCTATTTCATGTGGTACCAAATGAATATGTATATGTGGATTTCTCTGCTTCCATTATGTAAGTTGTGACATTGGTCCTGGTAGAATTTTCATATTTTAGAAATTTCTACCAAGTCCTTTTCTATCACCTTTTGGAGGTCTGTTCCAGACATGACCAAACTATCACAGGCTCTCTCTCTTTATTCTCTGCCTGTGCTACTTGCATCTTTTTTTATTATTCTTCTCCAATATTCTACGCTTGCACATCTGTCTTATTATCCTTATTCATCCATCTTAATATCCATATGTCAATATTTATTCCGTGGATGTGATGGGACATAGGGGCTCAGCACTCAATCTTAATATAATATTGCTGGTCTAGTACTTATATAAAAATAACCTTTCACTTTGTTAGGCATCTTTTTATTGCATAGCCACTCATTCATCTCAAATACTTAAGTTATGTGTACTTTGAAATCTAATTGCTTATCACATTTTATCTGTAGTCTTTCTACTGTATATTAGTATTTTCTACCCTGCATCTGAGGCTAAGCATGTTTACCAATGCTGCAATGACTATAGAGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGGGTAATTTTTTTCAAGATTTTGAGAACGGATTTTCTGACTACTTTTCCTTATCTTTCTCTTAACATTTCTTTGAGATGCTGACGTTGGGCCTGCTGCAGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAAGTATGTCAATACCACTTTTTATCTATTTCATCATATGCATCCTTTCTCAATCTTGATTTTTTAATTATAAAGTAATATCAATCTTGATTTTAGCCATGTTTACTTTTAGCTTCTCTTTTTGAATTTGTTACCACATTCCCTGATATTAGAAACCTTTGGTTTTCAGAAGCATGTCATATATTCAAATGTTCATATTTTTAAGTTTTATATATTGAAATGAAACTTTAGGAGGCGGCCATTAACTCTTTCTGCTTATCTTTTAGCTGCCAGTTCATGATACTAATATGCTTTTACCAAGTATCATGAAAAGTTCTTACTGGTTACTTTTACTTGTAACATGGCAAGTGAGCAGGAGGCGGCTACTCCTCACTTACTTCTACGTGTTTGTAAGATGTAACACTTCCTTTGAGATGTGATCACCTTTAAATTGGGGAAACAGACACAGACACCGCGCCTTTAATTGTTGTTTGAAGTGCTAGTCTTACTTTCTTAATTTGGTGATGTATCATTTCTAGGTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAGGTATGTTCAAAATACTTTGTTCGTAGATTGAAAATATACTCCTACTTCTGTAATTGCATTTAATCTGAATTTAACATTTTTGATAATACCCAGGCAGGGGAAAA</genome_strand>
        <mrna_strand>TTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG..................................................................................................GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG.............................................................................................GCAGGGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E285242" ref_strand="+" ref_description="SGN-E285242 [cLER-20-H16]">
      <seq>ttgtcttctccacctaatttattttatccctaaatccccccctttttttttcctcctctctctgtaaacccacattgaatttattgtctaacaatgctcggcgttgagttaaggatctccaccgtcgccggagttttcaccgatctaccggaaacaagtcgccggagtgccagctggaactgtaactcctccattggaaatatctcatatcatctctcttccagaaataggcattgtagaaagtccagattcatggtaatctgtagcaagtcatcacgcggaagctttaatcggaaatctaatcagagtgatgaaccgggtgatgattatattgaagctgtcgttctcgtttcagagactatgaagcactacaaaatgcatatgggtggatttcaagaagaaacaagatggcactcatctgctcagctgattccctcttcttttcatcctaaggatcgtattgctaatgcatcatctttagggacaggatttcttcgccgtttcaagaatccaactatttttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagattcattgcatgaggaggagactggggattgccccgacgagttcctgcttttgaggaatctattgttgaaatctggctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="12210" stop="14798"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12510" g_stop="12864" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13985" g_stop="14197" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="568" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14293" g_stop="14345" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="621" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.519" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14444" g_stop="14498" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="676" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E285242" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12510" e_stop="12864"/>
          <exon e_start="13985" e_stop="14197"/>
          <exon e_start="14293" e_stop="14345"/>
          <exon e_start="14444" e_stop="14498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAGGTATGGAAAATTACCGTTTTGCCCTTTTCTCCGATATTTTTTTGTTAGAGAAATACTGATGCAGGTAATATATTCTTCATGAACATTACTTTGTTGAAATGTATGAAAAAGATCAGATTTTTCTCTCTATGCTTTTGCTTTTTTAATCAATGTAGCTCAACTGCTATTAGTAAGTGAAAAATGGAAAATTGGTTGCTTAGCTGCTAGCTCCACAGACTTTGAACAAGTTGCTTTCCCAGTAACATTTGATGATCCTGTACGAATTAGTCTAAAAAACCAATGTTATGGAATGGAGGGACCTAAAATCTTTGCTCCGCCTCTCCAAAAAATGTATTATCACACGTGGATCATTCAAAAAGAAACTACTTTTGGAGTATCTGATGCACACATTTTAATCATTTCAATTTGTATAAAAAATGACTTGAGATGGAAAATCATGCGCTCTACAATAATTTGAGAAACAAAATAAGTCAATTGATAATTTATATCTTGAATACTGAATCACAGAATCAGTTGAGTTCCCTATTTGATTCATATGATTCCATTTTGGTTTAGTCAGGTCTATTTCATGTGGTACCAAATGAATATGTATATGTGGATTTCTCTGCTTCCATTATGTAAGTTGTGACATTGGTCCTGGTAGAATTTTCATATTTTAGAAATTTCTACCAAGTCCTTTTCTATCACCTTTTGGAGGTCTGTTCCAGACATGACCAAACTATCACAGGCTCTCTCTCTTTATTCTCTGCCTGTGCTACTTGCATCTTTTTTTATTATTCTTCTCCAATATTCTACGCTTGCACATCTGTCTTATTATCCTTATTCATCCATCTTAATATCCATATGTCAATATTTATTCCGTGGATGTGATGGGACATAGGGGCTCAGCACTCAATCTTAATATAATATTGCTGGTCTAGTACTTATATAAAAATAACCTTTCACTTTGTTAGGCATCTTTTTATTGCATAGCCACTCATTCATCTCAAATACTTAAGTTATGTGTACTTTGAAATCTAATTGCTTATCACATTTTATCTGTAGTCTTTCTACTGTATATTAGTATTTTCTACCCTGCATCTGAGGCTAAGCATGTTTACCAATGCTGCAATGACTATAGAGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGGGTAATTTTTTTCAAGATTTTGAGAACGGATTTTCTGACTACTTTTCCTTATCTTTCTCTTAACATTTCTTTGAGATGCTGACGTTGGGCCTGCTGCAGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATG</genome_strand>
        <mrna_strand>TTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG..................................................................................................GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484933" ref_strand="+" ref_description="SGN-E484933 [cSTE-15-L24]">
      <seq>caagaatccaactatttttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagattcattgcatgaggaggagactggggattgccccgacgagttcctgcttttgaggaatctattgttgaaatctggctatgaagttaaaatggtgaagattacagaaagagtgactagtacttattttgccagaatatttttccacaaggcaggggaaaaaaatatttttagtgtggatgctcgcccctcagatgccattaatgttgccagaagatgtaaggcaccaatatttgtgaataagcaaattgtcttgactgatgcaacaagaataggttatggaatggaccgatctagcagaattaagtccacctatgatgtattattagatagtgcatcagatggccccgatttactttctgaagaacttagtgtgctgagaaatatgaacttagcagtgaatgaggagaggtacaatgatgcagctatgtggaaggacaaactgatgagacttcgtgagttcaagacatgagctctacaatctttatccagaaataaaatgtaaatattccttctggattgatggcagctatgacactgcactgtatttcaacatcacattaaccaatgtttcaaggaatcaataatcttcagggnaagtttgaaaattattgggtgtgtacatgttcccccttgttttagaaatctttgaaagtaaatgccttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="13833" stop="16764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14133" g_stop="14197" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14293" g_stop="14345" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="118" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.519" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14444" g_stop="14500" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="175" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15016" g_stop="15081" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="241" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15175" g_stop="15246" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="313" r_length="72" r_score="0.944"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="15247" i_stop="15649" i_length="403">
            <donor d_prob="0.954" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15650" g_stop="15759" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="423" r_length="110" r_score="0.982"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="15760" i_stop="15833" i_length="74">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.753" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="15834" g_stop="15925" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="515" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="15926" i_stop="16027" i_length="102">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16028" g_stop="16094" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="582" r_length="67" r_score="0.955"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="16095" i_stop="16283" i_length="189">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="16284" g_stop="16464" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="758" r_length="176" r_score="0.823"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E484933" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E484933" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14133" e_stop="14197"/>
          <exon e_start="14293" e_stop="14345"/>
          <exon e_start="14444" e_stop="14500"/>
          <exon e_start="15016" e_stop="15081"/>
          <exon e_start="15175" e_stop="15246"/>
          <exon e_start="15650" e_stop="15759"/>
          <exon e_start="15834" e_stop="15925"/>
          <exon e_start="16028" e_stop="16094"/>
          <exon e_start="16284" e_stop="16464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGGGTAATTTTTTTCAAGATTTTGAGAACGGATTTTCTGACTACTTTTCCTTATCTTTCTCTTAACATTTCTTTGAGATGCTGACGTTGGGCCTGCTGCAGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAAGTATGTCAATACCACTTTTTATCTATTTCATCATATGCATCCTTTCTCAATCTTGATTTTTTAATTATAAAGTAATATCAATCTTGATTTTAGCCATGTTTACTTTTAGCTTCTCTTTTTGAATTTGTTACCACATTCCCTGATATTAGAAACCTTTGGTTTTCAGAAGCATGTCATATATTCAAATGTTCATATTTTTAAGTTTTATATATTGAAATGAAACTTTAGGAGGCGGCCATTAACTCTTTCTGCTTATCTTTTAGCTGCCAGTTCATGATACTAATATGCTTTTACCAAGTATCATGAAAAGTTCTTACTGGTTACTTTTACTTGTAACATGGCAAGTGAGCAGGAGGCGGCTACTCCTCACTTACTTCTACGTGTTTGTAAGATGTAACACTTCCTTTGAGATGTGATCACCTTTAAATTGGGGAAACAGACACAGACACCGCGCCTTTAATTGTTGTTTGAAGTGCTAGTCTTACTTTCTTAATTTGGTGATGTATCATTTCTAGGTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAGGTATGTTCAAAATACTTTGTTCGTAGATTGAAAATATACTCCTACTTCTGTAATTGCATTTAATCTGAATTTAACATTTTTGATAATACCCAGGCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAGGTATTGTTCTTATGGGACTTTGAGATTCAAGTTTGATAATCAATCGCTTCATATAAATTGCTTACCATTGTAGAAAACATTATGTCTCCTGACTGTTTTCCATTTGACCTTTTTCCTAGCATCCTGAGATGAAAAGATTGATCTCTCTTCCTTGAGCCCAGAGTCTATCTGAAACAGCCTCTCTACCTTCCAAGGTAGGGGTAAGGTCGAATACACACGATCTCACTAGACCTACTTGTGAGATTCATAAGGACTTGTGGTAAAGTTTTATGTGTATGATCAACTTCTTTTCAGTTTTAGCTCCTGTTAGAATCAGTCTTATTAATCTCTCTTGAGCTGTAATGCCCCACCTACAAATTTTGACAGCCGTTATCTGTAATTGAGCTTGTTCTGGTTTATGCAGGCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAGGTTGGTCTCTTTTCTCTCCTATGTACATTTCTTTGGACTTTCTCCAAACTTAAGACTAATTCTGTTTGGCGCAGTGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAGGTACATCAAAGTAAACTTATAATTATTTTGGTGGAAGCATCTGCTATAGTTTTTCTGTAATTAATTTGTTGACACATCACCTATATTTTCTGGTTCCTGCAGCTGTGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTAAAATCTTTCTCCAGGTACATCTTTCTACTGTTCAATGAAAGAGTTCTTTGATTACATTAATAGTGTCATGGAATGAGAATATTTATATTATGTTGGATTATGGATATAGTATTCATCTGGCTCTTGAAAATTTACATTATTCTACAATGCACATCTTTCAAATTTTGCTGCTATCCGTTGAAACTCTCTCCTTGTCTTTTCAGAAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACCGCGCTATATTTCAACTTTTCAGTATCACATTAACAAAAGTTTGGAGGAATCAATAATCTTCAGGG-AAGTTCAAGTATTATT-ATTGTGTACATGTT-CCCCTTGCTGTAGAAATCTCGAAAAGTAAATGCCTTACC</genome_strand>
        <mrna_strand>CAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG..................................................................................................GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG.............................................................................................GCAGGGGAAAAAAATATTTTTAGTGTGGATGCTCGCCCCTCAGATGCCATTAATGTTGCCAGAAGATGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACAAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTATTAGATAG..........................................................................TGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTGTGCTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAG......................................................................................................CTATGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTACAATCTTTATCCAG.............................................................................................................................................................................................AAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACTGCACTGTATTTCAA-----C---ATCACATTAACCAATGTTTCAAGGAATCAATAATCTTCAGGGNAAGTTTGAAAATTATTGGGTGTGTACATGTTCCCCCTTGTTTTAGAAATCTTTGAAAGTAAATGCCTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427053" ref_strand="+" ref_description="SGN-E427053 [STM-47-P1]">
      <seq>caagaatccaactatttttcttaagatttcctgtgatgcagaatatgtcttaccaattattgttggagaacatgctgtcgaaaaacttatagattcattgcatgaggaggagactggggattgccccgacgagttcctgcttttgaggaatctattgttgaaatctggctatgaagttaaaatggtgaagattacagaaagagtgactagtacttattttgccagaatatttttccacaaggcaggggaaaaaaatatttttnagtgtggatgctcgcccctcagatgccattaatgttgccagaagatgtaaggcaccaatatttgtgaataagcaaattgtcttgactgatgcaacaagaataggttatggaatggaccgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="13833" stop="16021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14133" g_stop="14197" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95">
            <donor d_prob="0.433" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14293" g_stop="14345" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="118" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.519" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14444" g_stop="14500" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="175" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15016" g_stop="15081" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="241" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="15175" g_stop="15246" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="314" r_length="73" r_score="0.917"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="15247" i_stop="15649" i_length="403">
            <donor d_prob="0.954" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15650" g_stop="15721" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="386" r_length="72" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E427053" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14133" e_stop="14197"/>
          <exon e_start="14293" e_stop="14345"/>
          <exon e_start="14444" e_stop="14500"/>
          <exon e_start="15016" e_stop="15081"/>
          <exon e_start="15175" e_stop="15246"/>
          <exon e_start="15650" e_stop="15721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTGGTATGTACTTTTAAATTTCTACTTGGACAACTAGCAGTGTCTTGTAAACAGTTATATCATACTGTTTTCATAACTCTTACTGCCTGCTACTTCAGGAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGGGTAATTTTTTTCAAGATTTTGAGAACGGATTTTCTGACTACTTTTCCTTATCTTTCTCTTAACATTTCTTTGAGATGCTGACGTTGGGCCTGCTGCAGGATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAAGTATGTCAATACCACTTTTTATCTATTTCATCATATGCATCCTTTCTCAATCTTGATTTTTTAATTATAAAGTAATATCAATCTTGATTTTAGCCATGTTTACTTTTAGCTTCTCTTTTTGAATTTGTTACCACATTCCCTGATATTAGAAACCTTTGGTTTTCAGAAGCATGTCATATATTCAAATGTTCATATTTTTAAGTTTTATATATTGAAATGAAACTTTAGGAGGCGGCCATTAACTCTTTCTGCTTATCTTTTAGCTGCCAGTTCATGATACTAATATGCTTTTACCAAGTATCATGAAAAGTTCTTACTGGTTACTTTTACTTGTAACATGGCAAGTGAGCAGGAGGCGGCTACTCCTCACTTACTTCTACGTGTTTGTAAGATGTAACACTTCCTTTGAGATGTGATCACCTTTAAATTGGGGAAACAGACACAGACACCGCGCCTTTAATTGTTGTTTGAAGTGCTAGTCTTACTTTCTTAATTTGGTGATGTATCATTTCTAGGTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAGGTATGTTCAAAATACTTTGTTCGTAGATTGAAAATATACTCCTACTTCTGTAATTGCATTTAATCTGAATTTAACATTTTTGATAATACCCAGGCAGGGGAAAAAGATATTATT-AGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAGGTATTGTTCTTATGGGACTTTGAGATTCAAGTTTGATAATCAATCGCTTCATATAAATTGCTTACCATTGTAGAAAACATTATGTCTCCTGACTGTTTTCCATTTGACCTTTTTCCTAGCATCCTGAGATGAAAAGATTGATCTCTCTTCCTTGAGCCCAGAGTCTATCTGAAACAGCCTCTCTACCTTCCAAGGTAGGGGTAAGGTCGAATACACACGATCTCACTAGACCTACTTGTGAGATTCATAAGGACTTGTGGTAAAGTTTTATGTGTATGATCAACTTCTTTTCAGTTTTAGCTCCTGTTAGAATCAGTCTTATTAATCTCTCTTGAGCTGTAATGCCCCACCTACAAATTTTGACAGCCGTTATCTGTAATTGAGCTTGTTCTGGTTTATGCAGGCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCT</genome_strand>
        <mrna_strand>CAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG...............................................................................................GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG..................................................................................................GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG.............................................................................................GCAGGGGAAAAAAATATTTTTNAGTGTGGATGCTCGCCCCTCAGATGCCATTAATGTTGCCAGAAGATGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACAAGAATAGGTTATGGAATGGACCGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244853" ref_strand="+" ref_description="SGN-E244853 [cLEF-2-M8]">
      <seq>caaggcaggggaaaaagatattattagtgtggatgctcgtccctccgatgccattaatgttgccagaagatgtaaggcaccaatatttgtgaataagcaaattgtcttgactgatgcaactagaataggttatggaatggaccgatctagcagaattaagtccacctatgatgtattactagatagtgcatcagatggccccgatttactttctgaagaacttagtatgttgagaaatatgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="14873" stop="16191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15078" g_stop="15081" g_length="4"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="4" r_length="4" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15175" g_stop="15246" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="5" r_stop="76" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15247" i_stop="15649" i_length="403">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15650" g_stop="15759" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="186" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15760" i_stop="15833" i_length="74">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.753" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15834" g_stop="15891" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="244" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E244853" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>244</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15078" e_stop="15081"/>
          <exon e_start="15175" e_stop="15246"/>
          <exon e_start="15650" e_stop="15759"/>
          <exon e_start="15834" e_stop="15891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGTATGTTCAAAATACTTTGTTCGTAGATTGAAAATATACTCCTACTTCTGTAATTGCATTTAATCTGAATTTAACATTTTTGATAATACCCAGGCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAGGTATTGTTCTTATGGGACTTTGAGATTCAAGTTTGATAATCAATCGCTTCATATAAATTGCTTACCATTGTAGAAAACATTATGTCTCCTGACTGTTTTCCATTTGACCTTTTTCCTAGCATCCTGAGATGAAAAGATTGATCTCTCTTCCTTGAGCCCAGAGTCTATCTGAAACAGCCTCTCTACCTTCCAAGGTAGGGGTAAGGTCGAATACACACGATCTCACTAGACCTACTTGTGAGATTCATAAGGACTTGTGGTAAAGTTTTATGTGTATGATCAACTTCTTTTCAGTTTTAGCTCCTGTTAGAATCAGTCTTATTAATCTCTCTTGAGCTGTAATGCCCCACCTACAAATTTTGACAGCCGTTATCTGTAATTGAGCTTGTTCTGGTTTATGCAGGCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAGGTTGGTCTCTTTTCTCTCCTATGTACATTTCTTTGGACTTTCTCCAAACTTAAGACTAATTCTGTTTGGCGCAGTGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAAC</genome_strand>
        <mrna_strand>CAAG.............................................................................................GCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................GCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAG..........................................................................TGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E539605" ref_strand="+" ref_description="SGN-E539605 [TUS-59-H7](-)">
      <seq>acaattgcaacctttaggtaaaatgtaaatagtttgattgttgctgaagaatatgtgaactatgtgatatgtagcatgtgcgcattcaagatgaaactccttccatgccaacaatagtagcattaaactttcaaaagaagagagatgagatcaagctttgaagtgggtagctgaaagaaagctgtctgtgaaggtcaggaaagacgagtttgtttagtgcaaatcaacaaatattgcaaagatggcacgacttaaaagccatggggtgatatattaccatgacacacagatggtgtctttccttttcctctcatcaccactcatagatagttgtatataagttatgagaaggggctggagtgactatgctcaagttatatgttgtacatttgattccatccatattggcagcatttattatatccagactccagattatttgatgaaaaaaaaaaaaaaaaaaaaaaaaaaatatttttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="16202" stop="61920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16502" g_stop="16938" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16939" i_stop="17279" i_length="341">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="0.59"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17280" g_stop="17323" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="483" r_length="43" r_score="0.591"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E539605" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16502" e_stop="16938"/>
          <exon e_start="17280" e_stop="17323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAA-TGCAACCTCTAGGTAAAATGTATATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATA-GTAGCATGTGCGCATTCAAGATG-AACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAACCTTTCAAGCGATCAACATCTCCAGTTTGTTTTTCAACTCTTCTTTGTTGCTCTCTTGTCAATCACTAACTACGTCCACTAGTTCATCACTTCAGTTTATGAACTATGCACTCATAGTAACCCTAGAAAAATTAGCCCGTGAAAATATAATATATCTTTAACTTATGAGCCGTACATTTATTAGCTCAGCCCATAAAAAATTGGGTTGATATGTAGAAATTGTGACACGGTATTTTTCAAAAGATATATTTTTTTTTCATTTGATATGTTACAGTTATATATAGCTGTAGTAAGGAAAAAAAAAAACAATTTATCAGA</genome_strand>
        <mrna_strand>ACAATTGCAACCTTTAGGTAAAATGTAAATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATATGTAGCATGTGCGCATTCAAGATGAAACTCCTTCCATGCCAACAATAGTAGCATTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGGGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTATGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATT.....................................................................................................................................................................................................................................................................................................................................................TGAT-GAAAAAAAAAAAAAAAAAAAAAAAAAAATATTTTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309576" ref_strand="+" ref_description="SGN-E309576 [cLEY-26-I5]">
      <seq>gcaacctctaggtaaaatgtatatagtttgattgttgctgaagaatatgtgaactatgtgatagtagcatgtgcgcattcaagatgaactccttccatgccaacaatagtagcactaaactttcaaaagaagagagatgagatcaagctttgaagtgggtagctgaaagaaagctgtctgtgaaggtcaggaaagacgagtttgtttagtgcaaatcaacaaatattgcaaagatggcacgacttaaaagccatgtggtgatatattaccatgacacacagatggtgtctttccttttcctctcatcaccactcatagatagttgtatataagttaagagaaggggctggagtgactatgctcaagttatatgttgtacatttgattccatccatattggcagcatttattatatccagactccagattattagaagaattggagatttaggaatattgtaaagtaataattaccagaagggggttctttgtcaaaaaacctttcaagcgatcaacatctccagtttgtttttcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="16207" stop="61919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16507" g_stop="17040" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17041" i_stop="17299" i_length="259">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17300" g_stop="17314" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="549" r_length="15" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E309576" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16507" e_stop="17040"/>
          <exon e_start="17300" e_stop="17314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACCTCTAGGTAAAATGTATATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAACCTTTCAAGCGATCAACATCTCCAGTTTGTTTTTCAACTCTTCTTTGTTGCTCTCTTGTCAATCACTAACTACGTCCACTAGTTCATCACTTCAGTTTATGAACTATGCACTCATAGTAACCCTAGAAAAATTAGCCCGTGAAAATATAATATATCTTTAACTTATGAGCCGTACATTTATTAGCTCAGCCCATAAAAAATTGGGTTGATATGTAGAAATTGTGACACGGTATTTTTCAAAAGATATATTTTTTTTTCATTTGATATGTTACAGTTATATATAGCTGTAGTAAGGAAAAAAAAAAACAA</genome_strand>
        <mrna_strand>GCAACCTCTAGGTAAAATGTATATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAACCTTTCAAGCGATCAACATCTCCAGTTTGTTTTTC...................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268524" ref_strand="+" ref_description="SGN-E268524 [cLEI-13-E6]">
      <seq>cgagtcttctctctttttttttgatcgcttgaaaggttgtttgacaaaaaacccccttctggcaattattactttacaatattcctaaatctccaattcttctaataatctggagtctggatataataaatgctgccaatatggatggaatcaaatgttcaacatattacttgagcatagtcactccaaccccttctcttaacttatatacaactatctatgactggtgatgagaggaaaaggaaagacaccatctgcgtgtcatggtaatatatcaccacatggcttttaagtcgtgccatctttgcaatattcgctgattggcactaaacaaactcgtctttcctgaccttcacagacagctttctttctgctacccacttcaaagcttgatctcatctctcttcttttgaaagcctaacgctactattgttggcatgcaaggagttcatcttgaatgcgcacatgctactatcacatagctcacatattcttcagcaacaatcaaactatatacattttaccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="17323" stop="16215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17024" g_stop="16515" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="527" r_length="510" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E268524" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17024" e_stop="16515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTTGATCGCTTGAAAGGTTTTTTGACAAAGAACCCCCTTCTGGTAATTATTACTTTACAATATTCCTAAATCTCCAATTCTTCTAATAATCTGGAGTCTGGATATAATAAATGCTGCCAATATGGATGGAATCAAATGTACAACATATAACTTGAGCATAGTCACTCCAGCCCCTTCTCTTAACTTATATACAACTATCTATGAGTGGTGATGAGAGGAAAAGGAAAGACACCATCTGTGTGTCATGGTAATATATCACCACATGGCTTTTAAGTCGTGCCATCTTTGCAATATTTGTTGATTTGCACTAAACAAACTCGTCTTTCCTGACCTTCACAGACAGCTTTCTTTCAGCTACCCACTTCAAAGCTTGATCTCATCTCTCTTCTTTTGAAAGTTTAGTGCTACTATTGTTGGCATGGAAGGAGTTCATCTTGAATGCGCACATGCTACTATCACATAGTTCACATATTCTTCAGCAACAATCAAACTATATACATTTTACCTA</genome_strand>
        <mrna_strand>TTTTTGATCGCTTGAAAGGTTGTTTGACAAAAAACCCCCTTCTGGCAATTATTACTTTACAATATTCCTAAATCTCCAATTCTTCTAATAATCTGGAGTCTGGATATAATAAATGCTGCCAATATGGATGGAATCAAATGTTCAACATATTACTTGAGCATAGTCACTCCAACCCCTTCTCTTAACTTATATACAACTATCTATGACTGGTGATGAGAGGAAAAGGAAAGACACCATCTGCGTGTCATGGTAATATATCACCACATGGCTTTTAAGTCGTGCCATCTTTGCAATATTCGCTGATTGGCACTAAACAAACTCGTCTTTCCTGACCTTCACAGACAGCTTTCTTTCTGCTACCCACTTCAAAGCTTGATCTCATCTCTCTTCTTTTGAAAGCCTAACGCTACTATTGTTGGCATGCAAGGAGTTCATCTTGAATGCGCACATGCTACTATCACATAGCTCACATATTCTTCAGCAACAATCAAACTATATACATTTTACCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E552212" ref_strand="+" ref_description="SGN-E552212 [cTSB-3-D15]">
      <seq>tgaagaatatgtgaactatgtgatagtagcatgtgcgcattcaagatgaactccttccatgccaacaatagtagcactaaactttcaaaagaagagagatgagatcaagctttgaagtgggtagctgaaagaaagctgtctgtgaaggtcaggaaagacgagtttgtttagtgcaaatcaacaaatattgcaaagatggcacgacttaaaagccatgtggtgatatattaccatgacacacagatggtgtctttccttttcctctcatcaccactcatagatagttgtatataagttaagagaaggggctggagtgactatgctcaagttatatgttgtacatttgattccatccatattggcagcatttattatatccagactccagattattagaagaattggagatttaggaatattgtaaagtaataattaccagaagggggttctttgtcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaannnggggggggggggggggggcccccccccccccaaggggggggaaaaaaaaaccgcgggggggccctttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="16245" stop="61920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16545" g_stop="17005" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17006" i_stop="19693" i_length="2688">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.558" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19694" g_stop="19708" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="476" r_length="15" r_score="0.600"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19709" i_stop="20101" i_length="393">
            <donor d_prob="0.740" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20102" g_stop="20123" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="498" r_length="22" r_score="0.864"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20124" i_stop="21904" i_length="1781">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.77"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21905" g_stop="21952" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="546" r_length="48" r_score="0.771"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21953" i_stop="22091" i_length="139">
            <donor d_prob="0.963" d_score="0.77"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22092" g_stop="22111" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="566" r_length="20" r_score="0.150"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="22112" i_stop="22627" i_length="516">
            <donor d_prob="0.899" d_score="0.00"/>
            <acceptor a_prob="0.678" a_score="0.38"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="22628" g_stop="22683" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="567" r_stop="621" r_length="55" r_score="0.446"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E552212" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E552212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16545" e_stop="17005"/>
          <exon e_start="19694" e_stop="19708"/>
          <exon e_start="20102" e_stop="20123"/>
          <exon e_start="21905" e_stop="21952"/>
          <exon e_start="22092" e_stop="22111"/>
          <exon e_start="22628" e_stop="22683"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAACCTTTCAAGCGATCAACATCTCCAGTTTGTTTTTCAACTCTTCTTTGTTGCTCTCTTGTCAATCACTAACTACGTCCACTAGTTCATCACTTCAGTTTATGAACTATGCACTCATAGTAACCCTAGAAAAATTAGCCCGTGAAAATATAATATATCTTTAACTTATGAGCCGTACATTTATTAGCTCAGCCCATAAAAAATTGGGTTGATATGTAGAAATTGTGACACGGTATTTTTCAAAAGATATATTTTTTTTTCATTTGATATGTTACAGTTATATATAGCTGTAGTAAGGAAAAAAAAAAACAATTTATCAGATACTAAATATCATACAAGAACTAGGGAAACCTCCAGAATTTTTATATATTTATTAACTTAGATCATTTTCACTTGTCTAAATTTAGCCCAACCCGGGCATTTGATATCTCTAAATCAGATCAAACAATAAGTTTGTTCATCAAGTTTGCCTCTTGAATTGAATTCAGTTCTTGAGCTTGCAATCGAAACTCTCAAAGAAGTAACTCATATAAATTCTTCATTTGACTTTAACATATATGATGTTGACTTTGGTATTGGTATCATATAAATTGGAATTATTGAAGTTGTTTGGCTGTAAAGGATTCTCTAAAAACTCTGCAGCGTCATTCATAGCTGGAAGCCTTAATGCCAATGGACTCATCCAAAAATATGAAAATTATTTCCTGCTGGTTTTCGTACACTTATTACTTGCCTTTTAACAACTTTAGAAACTTAATTCTTTTTCAAAATTGCCTCTTTGACTCTTTCCTTCATGTATCTTTTAGACAATTTGCATGCCCTAACTCTACAGAGAGGTAGAAGAGATAATTTCTGTTAGACCGTCGGCTATAGTCTAGAGAGAATTTTATTTATTATATAAATTCTAATTCAGAATCTCGTAAAAATTGTGAATATTTCATATATGTGTCATTATTAGTTTGAGGGGAGTAAAAGGTTATATTTTACCAAAATTTTTAAAATTTTCAAAATAGTTTCAATCTTAAGAAATTTATACTCCCAACACTTTAGTATGTAGTTTCTACTTTCTAATTAGGATTTTCATTAAAAAAATATATTTTAAAAATGTTATGGATATTTCACTTACATATATATTCAGGTAGACCTTTGTATATTTTTTTTGTTGGCAACAGTAAACGAACAAGTTTAGATTATACCATCAACAAGAATGATTTATTTATAGAAAATTGGTGTAGATATACTAGCATAATATATTATCTTTGTGGAAAAATGAGAGAAAAAAAAAAGATAAAAGAGAATAGCGAAAATCATACGATCCTTATTTGCATATCCTACTAGTACTCAAAAACATGTATACTATATATCCAAGGATGAGTACTCTTGGTCTTATAAGCTGGTTCAAATGAATCTATTATTTTCGGCTCGAACAAAATATATTACTATAAAAAGATATACTTATCAATTCGAAACTATTAACTCTAAGTATGGGGTTCGACTGATCTACATTCCAATTTATACCGTATGTGCTTCCAATAATAGAAAATCAATGAGGTTAATATCGTTTAATTCCATTATTATGTATAAACAAAAACACCATTAATATATATACACATATAGAGAGAGACAAAAATGATGTATCCTTCAAAAGGTTGAACAACATAATTAAACAAGAAAATTAATGGCATATATATACATATAGAGAATGATGATCAAATGCTCTTATTGTATCGATGCCAGAAGATGAGCATGATAATACATCTTCTTATGATATATAATCTTGAACGTTTCTCTTTTATCATCACCGATAAATATCCTTTCTTATCAGTATTGTTATTATTAATCAACATTCGTCTTCCATATCGATGATGATTTTCTTTTGCATGCCTTGGCCTTGATGTTGAAATTTCCCCTCCCTTATGCTGATCATAGGCAGACGTAGATACACATTGACCCATTAAATTTAACCAAAATCAACTAATAATTCACAAATATTCAACCCCTCTTTAAGAATTTAATTTTCTCTCTCTCTCTCTATCTAGAATTAAAGAGTGCCATTAGAAGAAGATAGAGCAACTTAATTGATCACTACTTTTGAGCCAACTTTTCAGCATTTTTTGTATCATCGGTTTTTTCCCCTCTTCTACGTGTCTTTATATATAAAAATAAGTATTAGTTTAATATTATTTCTATTTAATTAGGAAAAGCATATATGGTGTGAGTGGATTTTCTCAAAAAAAATTATAATATAAGCGTGTTTAGGAGTATATTTTGTTGTCGTTATCTGTAGAAATTTTAGTATTTTTTTTTATATCCATAAGAAACAACGTATCGTCCGTTACTGCTATGATTGGGACAAGTCAAATGTGTAATTCATGGCTTACGTTTCTGGAGTCATGAGGAGGCCTACCAAAAAAAAATAGTGTAAGAAATTTTTATTTTTACGCTATCAGACCAGGTTTAATGCCGTATGTAATTTTCAAGATTAAAAATCTTACGTTTAAGGTACTTGTAGATATGTAGAACTACAAATCATGCATTGTAAGTGTGCCTTGTTGTAAAGATGAACTTAAACCAAAAAATAAAAAAAAAATTGTTGAAAAATTAGGGGAGAATTAAAAACCTCGGACGGTGTTTAGCTGGATGGTGTATGTTTATATGAATGATTGATCCTCATGAGGTGTGTATGATTAGGATGAGGAAAAACAAGTACATTAAATTAATTAGCAATTATGTATTCTACCAGAAATATGTCCTTTTCTTTGTATAATGCAATTATAAAAAGGTTCTTCAAAGCTACTTGTATTTGTGAATAAATATCGAGGGAAATCTGCATGATTGATTATTATTAATTATTATGTAATTATGAAAGTGATTACCTAATTAAACGCATGAATCACTCAAATAAGTTAGTGGTTGGAGCATTAAGTCCTATATGATATGTGTGGTATGGTCTATAATTCACAATTAGTCTCATATTTTGTTATGATTTGAGTCACATTGATTTTAGTCTAAGTGATTTAGCACCTTTATTAGAATTCAAGTCACGTTAAAAAATAAGAAAAAATACTATTGATTCGTCTAAGGATGGGATGGGGTGGGAAAAAAAAAAGAAGAAAAAACAGTACTGATCATATAGCAGTAGGCAGGAATGGCATGTCAATTTTTGTTTTTCATTAATGGTTTACTTTATTAGGTGGGAAGTTAAATCTGAATATTCAATCCAGGAACTATTTTTCAAATAAAAGAGTTTAAAATGACTCTGAAATTAACTATTTCTTCTGATTTTATTTATTATTTGACCTACTTGGTGGATCAGATAAGACTTCTCCATGTCATCAAATAAATTAAATTGTTGCACTATTCTCATGTTTGACAATTCTTATACCAGTTGATTTTTTTTTTAAATTGTACATATAGGAAGAGGGAAGTAGAAAGGAAACTAAAGGATATATCATAAGCGAAAATCAAATAATTAACCGAATCTCAAATTAATTATTATCGTATGCAACATATTATTGTGTTTCAATGAAATATACCAAAGTGACAAAAATGTTTAGTTGTTATTAATTGGACATTGACTTAATAAATATTAAATTTGTATATTTGGGTTGATGAAGAGTTAACATCAGGTGGATTTTGGAAGTTTCCTCATTTGATTGTGTTAGCTAACAAACAAATATTTGAAATACTATGTGCAGAATGAAGAGAGAATTCAATAGTTTGCTTTGTCCTTTTTATTTTCTTCTGTGGGATCCTTTCATATTTGAGCCTCTTAAATTATCGTTAGCTCAGTGCCATAAAGACCAATAGTAATATTATGTCATGACATGATGCTTAATTTTCTCTTATTAGCTCACCATATATTTACGTTGTGTCCTCTTAATAAGTAACGTAGAAATGACAATAAAGCAGAGCGGAGCAGGTTAATTTTCATTTAATCCTTTTAAAATCATAGGCAGTTATTTTATGATAAGAAATTATGATCCAACAATTTGAGACACAAGTGTGTAATTTGGGGACTAATTTAAAGAAGTAATTCAAAAGCCTCGTACAATTTACATATATTGATATTTAAAACAATGGAAATAAGTTAACATGGGTAAAAGTTATCAAATATAATACAAATATTCACTCTTTTCAAATAAGAGTGCGGAGCTAAAAGGGTAAAAAAATTGACAAAAATTTCAAAAGGGCACATCAATTTTTTAAAAAATCAAAACGGTAAAATCGCTCACGATGTAGCGACTTTTGCCTTCTGAAAAAGCGAAATCGCTGCAATAGCAGCGATTCTTAAATTTGCTTTTTTTTAAAAATAATTAAATATATCGCTCCATCCGGAGCGATTTTCAAAATAATAATAAAAAATTACTTTTGTTATAAGTAGCTGCAGAAGCAGCGACTTCCATTAAGTTTTTTAATTTTTTTCTTTATTTAAAAAATAAATTGATTCAATTTTTTTAAAAAAAATCATTGACAACGATTTTTAATTAGTTTTTTTTTAAAAAAATCAAATCGCTGTAAAGCAGCGATTTACACTTAATTTATATTTTTTTGAAAATTTAATTAAATCGCTGCAAAAAAAAAGCCGATTAAATTAAGTTTTCAAAAAAAAAATGAATTCTTAATTAACACATTTTTTGGGACTGATCTTTATATGTGTTTATAAAATGAATTCTTAATTAACACATTTTTTGCTTTACACTTAAATTTTTATTTTTTTTTGAAAATTTAATTTAATCGGCTAATTTTTTTTACAGTGATTTAATTCAATTTTCAAAAAAAAATTATAAATTAAGTGTAAATAGCTACCTTTACAGTGATTTGATTTTTTTTTAAAAAAAACTAATTAGAAATCGCTGGCAATGATTTTTTTTTTAAACAAAAATTTGAATTAATTTTTTTAAAAAAAAAAATAAAGCAAAAAATAAAAATAAAATAAAAAAAATTAGTGCAAGTCGCTGCAGAAGCAGCGACTTATAAAACAAATTTTATTTTATTTTTTTTGAAAATCGCTCCGTGTGGAGCGATTTGTTCAATTTTTTTTATTTTTTTTTTAAAAAGCAAGTTTAAGAAATCGCTGTTATTGCAGCGATTTCGCTTTTTCAGAAGGTAAAAGTCGCTACACGGTGAGCGATTTTACCGTTTTGATTTTTTAAAAAAATTAATATGCCCTTTTGAAATTTTTGACAATTTTTTTTACCCTTTTAACTCCGCACTCTTTCAAATAACACGGGACCAATGAAAAACATTGAATGAACAAACAAATACTAGTATGTTTGACTAAAAAAGTATTTCGATTCTGGTGTCGGTAAATTTATGAGTGTGTATTAAATTTGAAGTTATTTCATCAAAATTATAAACTTGCTCTCTCCAATAGTGGATTAATTTTCACTTCTCGTGTGAAAAAATTAAACATCAGAAAAGTTTTCTAGACTTAGTTACTTTAAAGTTTAAACTAGAAATACATTTTGCAACAAAACTAAAATTTTGAAGTTAGCGGTCAAGAAAAAACTTATATTAGAGAGATAAGTTAAAAAAGTAGTAGAGAGAATAAAATTATACGTTTACGATTTACTGAGGATATGACATTAGATATAAAAAAAATATTTATTGAATACGTATCAGAGAGTGCTCCAATGGCAGTGGGACACAATTGAGATAATTTCGACGATTAGAAAAAA</genome_strand>
        <mrna_strand>TGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNN...........................................................................................................................................GGGGGGGGGGGGGGGGGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCCCCCCAAGG-GGGGGGAAAAAAAAACCGCGGGGGGGCCCTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737369" ref_strand="+" ref_description="SGN-E737369 [LC09CB07]">
      <seq>cttctcattctctctcctccatcttttcccctaaaaaaaatttgtcccctttctcgtatttacccatcaaatcaactctaaatccattccttctgttcatcatgaaaaattttctctaaattatggaaactactttcttatgctactctactgttacttgcaacttttcccccctgtaaatccattacaaagaggaggagattttgtgaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcgggagcagagcgatggagcccttgtcgcccaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactacaggatttgaatctccaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcagcctatgtacactggaacgtcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcattcatcctcctccaacttttggttcatcaccaaatcttcaaggccttgaaattcatgatgataaagctcatgtgaatcatggagatagtgatatcaattcaacttcgcggaacaccaggccaatgcacgagattactttttcaactattgacaagccaaaaacgctcactcagttgaccaatataatatctgagattggtctgaacattgagaggcccatgttttttcaactactgatggtttctccttggatgtctttgtggttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36066" stop="41612"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36366" g_stop="36794" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="429" r_length="429" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="544" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="618" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39592" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="619" r_stop="738" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145">
            <donor d_prob="0.018" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39738" g_stop="39792" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="793" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39793" i_stop="41218" i_length="1426">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41219" g_stop="41312" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="794" r_stop="886" r_length="93" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E737369" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>887</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E737369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36366" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39592"/>
          <exon e_start="39738" e_stop="39792"/>
          <exon e_start="41219" e_stop="41312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTCATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAGGTTGAATTGCCTTATTTCTTGAGTTGAAGATGATAAGATCCATGATACTAGTTTGGCTTCATAGCTTTGATAGAAAGTGTATTTATTGTTCACAAAGGATTTCTAGTTGACTTTTCTTTCTTATGAGCCAAATGATTTTGTGCAGGCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAGGTGCCTTATTCTTTTAGGAATCCTCCTCCCTTTTTGTTCATAAATACATCTTTTATCTTCTCATAATCAAACAAAGACTATAGTTTCATGAATTTATCTTATGCAGAGCTAGTGTGAATTTAACCAGAAATAAGGCTAAGCCCCTCGAATTCCTGTTGTGTTGTGGATATTATGAGTCCAATATTTGACAGGAAAAAAGGTTAAATCCCTTGAATTCCTTTTTGTGGATGGATAGTACCGTACCTGTCATAGGACTCACCACATATAATAACTGAAGATAGACTCATTCTAGATTAATAAGCATGGATAGAATGACCTTTAGCTGAGTCGTTCAGCTGATATGATATGGTGTTTGATTTCTATTTCTCAAGTGCATAGTATAAGCATCTTAGTCAAGATAAAATTTGATAGAGAAGACTACTTGATTCACCCCCCCCCCCCCCAAACATGAAAAGGGTGATAGAAGACTACACTTAAGGGGAAACAGAGGATAATAAGGAAAAGTTGTTTTTATGGACCCACAGATTGATTCTTTGATTAACTTCTGCACCTAAGAGATGAGGGTGGGGTTAGTCAGTTAATACTAGGGATGGCAATAGGGCGTGGTGGGGTGGGTTTAAGGCTATGCACGGGGGGAGAGATGCGAGGCGGGTTGAAGTGGGTTTTTTAAAGCTAATGCGGGGCGGGGTGGGATGCGGGTATATGTGATTTTATATGGGTTCAAACCTAAAGCTACTAAAATATTCAAAATAATAAATGAAAATGTTTTAATAAAAATAATACGATTTCTTACATGTTTCCAGTTGATCTCTACAAAATAAAATTTTAAGTCATTATCTATTAAATTAATACAACTTTATGAAAAAATAATTTATTTTTATGAATTTTATTTTAGTATCAAAGTTAACCAGAAAAAGAAAATATTAAAAAAATTATGCGGGGCTGGGTGGAGCGGGTTGAAAATGGAAAGAAGTTGTAATACGGGATGGGCGGATTAAAAATTTTGCGGGTTAAGCTCAGCCCGCCTGCACTACCCCATTGCCATCCCTAGTTAATACCTAGCTTTGAAGAATATTTGTCTTCATGACTATCTGCTTTTCTGATACAATTATGTTCCAAAGTTAATATATGAAATTCTTATGTAAATGCTCAATAGTTGTACCTACAAATCTAACAGTCTCCGTAAAATATAGAGACAGTATACCTGGACCGAAATCTGTATCTTTTATTTGCTTTCTGTCTAGTGCAATTTAAGCTTATATCTCTGATTAGATTATTCATTCCTGTTCAGTCCTGGAAGTTATGTAACTTCATTAATCTGCAGATTCTGCCATATTTTCAGAGTTCTATCAAACATATTTATCTTACCATGTTAACTGTGTTCTCATCTTCTTTACTTGCACTGATGTCCATCCTGGATTTCCAGTTGACCAATATAATATCTGAGATTGGTCTGAACATTGAAGAGGCCCATGTTTTTTCAACTACTGATGGTTTCTCCTTGGATGTCTTTGTGGTTG</genome_strand>
        <mrna_strand>CTTCTCATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGAACACCAG.................................................................................................................................................GCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAATATAATATCTGAGATTGGTCTGAACATTG-AGAGGCCCATGTTTTTTCAACTACTGATGGTTTCTCCTTGGATGTCTTTGTGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E469801" ref_strand="+" ref_description="SGN-E469801 [cSTB-14-E16]">
      <seq>attctctctcctccatcttttcccctaaaaaaatttgtcccctttctcgtatttacccatcaaatcaactacaaatccattccttctgttcatcattcaaattttctctaaattatggaaactgctttcttctgctactctacagttacttgcaactttttctccttgtaatccattactaagggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcaccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggttttgaagaccagctctggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36072" stop="37341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36372" g_stop="36794" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37041" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="512" r_length="93" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E469801" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469801" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36372" e_stop="36794"/>
          <exon e_start="36949" e_stop="37041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGC</genome_strand>
        <mrna_strand>ATTCTCTCTCCTCCATCTTTTCCCCT-AAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTACAAATCCATTCCTTCTGTTCATCAT-TCAAATTTTCTCTAAATTATGGAAACTGCTTTCTTCTGCTACTCTACAGTTACTTGCAACTTTTTCTCCTTGT-AATCCATTACTAAG-GGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCACCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGTTTTGAAGACCAGCTCTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202558" ref_strand="+" ref_description="SGN-E202558 [cLEC-6-H16]">
      <seq>ttctctctcctccatcttttcccctaaaaaaaatttgtcccctttctcgtatttacccatcaaatcaactctaaatccattccttctgttcatcatgaaaaattttctctaaattatggaaactactttcttatgctactctactgttacttgcaacttttcccccctgtaaatccattacaaagaggaggagattttgtgaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcgggagcagagcgatggagcccttgtcgcccaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactacaggatttgaatctccaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36073" stop="37295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36373" g_stop="36794" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="422" r_length="422" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="36995" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="469" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E202558" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202558" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36373" e_stop="36794"/>
          <exon e_start="36949" e_stop="36995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGC</genome_strand>
        <mrna_strand>TTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205089" ref_strand="+" ref_description="SGN-E205089 [cLEC-16-E3]">
      <seq>tctctcctccatcttttcccctaaaaaaaatttgtcccctttctcgtatttacccatcaaatcaactctaaatccattccttctgttcatcatgaaaaattttctctaaattatggaaactactttcttatgctactctactgttacttgcaacttttcccccctgtaaatccattacaaagaggaggagattttgtgaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcgggagcagagcgatggagcccttgtcgcccaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactacaggatttgaatctccaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36076" stop="37294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36376" g_stop="36794" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="419" r_length="419" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="36994" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="465" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E205089" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36376" e_stop="36794"/>
          <exon e_start="36949" e_stop="36994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</genome_strand>
        <mrna_strand>TCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E254598" ref_strand="+" ref_description="SGN-E254598 [cLEG-29-P10]">
      <seq>ctctcctccatcttttcccctaaaaaaaatttgtcccctttctcgtatttacccatcaaatcaactctaaatccattccttctgttcatcatgaaaaattttctctaaattatggaaactactttcttatgctactctactgttacttgcaacttttcccccctgtaaatccattacaaagaggaggagattttgtgaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcgggagcagagcgatggagcccttgtcgcccaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactacaggatttgaatctccaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36077" stop="37294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36377" g_stop="36794" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="36994" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="464" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E254598" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36377" e_stop="36794"/>
          <exon e_start="36949" e_stop="36994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</genome_strand>
        <mrna_strand>CTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E463563" ref_strand="+" ref_description="SGN-E463563 [cPRO-15-G1]">
      <seq>ttttcccctaaaaaaatttgtcccctttctcgtatttacccatcaaatcaactacaaatccattccttctgttcatcattcaaattttctctaaattatggaaactgctttcttctgctactctacagttacttgcaactttttctccttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcactcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36089" stop="39629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36389" g_stop="36794" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="518" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="592" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39480" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="600" r_length="8" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E463563" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E463563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36389" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATC</genome_strand>
        <mrna_strand>TTTTCCCCT-AAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTACAAATCCATTCCTTCTGTTCATCATTCAAA-TTTTCTCTAAATTATGGAAACTGCTTTCTTCTGCTACTCTACAGTTACTTGCAACTTTTTCTCCTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CACTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E473299" ref_strand="+" ref_description="SGN-E473299 [cSTB-31-L8]">
      <seq>ttttcccctaaaaaaatttgtcccctttctcgtatttacccatcaaatcaactacaaatccattccttctgttcatcattcaaattttctctaaattatggaaactgctttcttctgctactctacagttacttgcaactttttctccttgtaatccattactaagggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcaccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggttttgaagaccagctctggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36089" stop="37294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36389" g_stop="36794" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="36994" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="448" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E473299" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E473299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36389" e_stop="36794"/>
          <exon e_start="36949" e_stop="36994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</genome_strand>
        <mrna_strand>TTTTCCCCT-AAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTACAAATCCATTCCTTCTGTTCATCATTCAAA-TTTTCTCTAAATTATGGAAACTGCTTTCTTCTGCTACTCTACAGTTACTTGCAACTTTTTCTCCTTGT-AATCCATTACTAAG-GGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCACCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGTTTTGAAGACCAGCTCTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698260" ref_strand="+" ref_description="SGN-E698260 [FA05DA07]">
      <seq>ttttcccctaaaaaaaatttccccccctttctcgaatttacccatcaaatcacctctaaatccattccttctgttcatcatgaaaaattttctctaaattatggaaactactttcttatgctactctactgttacttgcaacttttcccccctgtaaatccattacaaagaggaggagattttgtgaattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36089" stop="36879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36389" g_stop="36579" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E698260" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>191</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36389" e_stop="36579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCCTAAAAAAAATTT-GTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCT</genome_strand>
        <mrna_strand>TTTTCCCCTAAAAAAAATTTCCCCCCCTTTCTCGAATTTACCCATCAAATCACCTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413051" ref_strand="+" ref_description="SGN-E413051 [STM-17-C6]">
      <seq>ctaaaaaaaattgtcccctttctcgtatttaccatcaaatcaactacaaatccattccttctgttcatcattaaaattttctctaaattatggaaactactttcttttgctactctacagttacttgcaactttttccccttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgatggcgatggacgacaacgagagttgcggaagcagagcgatggagccattgtctccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatccccagcattcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36096" stop="39629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36396" g_stop="36794" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="509" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="583" r_length="74" r_score="0.946"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.714" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39479" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="590" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E413051" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36396" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39479"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCAT</genome_strand>
        <mrna_strand>CTAAAAAAAA-TTGTCCCCTTTCTCGTATTTA-CCATCAAATCAACTACAAATCCATTCCTTCTGTTCATCAT-TAAAATTTTCTCTAAATTATGGAAACTACTTTCTTTTGCTACTCTACAGTTACTTGCAACTTTTTCCCCTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTG-ATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCATTGTCTCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCCAG...............................................................................................................................................CATTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E471600" ref_strand="+" ref_description="SGN-E471600 [cSTB-24-H11]">
      <seq>ctaaaaaaaattgtcccctttctcgtatttaccatcaaatcaactacaaatccattccttctgttcatcattaaaattttctctaaattatggaaactactttcttttgctactctacagttacttgcaactttttccccttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgatggcgatggacgacaacgagagttgcggaagcagagcgatggagccattgtctccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36096" stop="37294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36396" g_stop="36794" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="36994" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="440" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E471600" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E471600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36396" e_stop="36794"/>
          <exon e_start="36949" e_stop="36994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</genome_strand>
        <mrna_strand>CTAAAAAAAA-TTGTCCCCTTTCTCGTATTTA-CCATCAAATCAACTACAAATCCATTCCTTCTGTTCATCAT-TAAAATTTTCTCTAAATTATGGAAACTACTTTCTTTTGCTACTCTACAGTTACTTGCAACTTTTTCCCCTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTG-ATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCATTGTCTCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309216" ref_strand="+" ref_description="SGN-E309216 [cLEZ-12-K13]">
      <seq>aaatttgtcccctttctcgtatttacccatcaaatcaactctaaatccattccttctgttcatcatgaaaaattttctctaaattatggaaactactttcttatgctactctactgttacttgcaacttttcccccctgtaaatccattacaaagaggaggagattttgtgaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcgggagcagagcgatggagcccttgtcgcccaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactacaggatttgaatctccaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcagcctatgtacactggaacgtcaaccaatactgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36103" stop="39597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36403" g_stop="36794" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="507" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39297" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="549" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E309216" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36403" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGAT</genome_strand>
        <mrna_strand>AAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205059" ref_strand="+" ref_description="SGN-E205059 [cLEC-16-H10]">
      <seq>aaatttgtcccctttctcgtatttacccatcaaatcaactctaaatccattccttctgttcatcatgaaaaattttctctaaattatggaaactactttcttatgctactctactgttacttgcaacttttcccccctgtaaatccattacaaagaggaggagattttgtgaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcgggagcagagcgatggagcccttgtcgcccaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactacaggatttgaatctccaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36103" stop="37298"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36403" g_stop="36794" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="36998" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="442" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E205059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36403" e_stop="36794"/>
          <exon e_start="36949" e_stop="36998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACA</genome_strand>
        <mrna_strand>AAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487800" ref_strand="+" ref_description="SGN-E487800 [cSTE-26-J19]">
      <seq>ctctaaattatggaaactgctttcttctgctactctacagttacttgcaactttttctccttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaaggtcatcctatgtacactggaacatccaccaatactggtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36179" stop="39597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36479" g_stop="36794" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="430" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39297" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="472" r_length="42" r_score="0.881"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E487800" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E487800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36479" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGAT</genome_strand>
        <mrna_strand>CTCTAAATTATGGAAACTGCTTTCTTCTGCTACTCTACAGTTACTTGCAACTTTTTCTCCTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCATCCTATGTACACTGGAACATCCACCAATACTGGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E447188" ref_strand="+" ref_description="SGN-E447188 [cSTA-25-M1]">
      <seq>ctttcttctgtttctctacagttacttgcaactttttctccttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcactcatcctcctccaacttttggttcatcacccaatcttcaaggccttgaaattcatgatgataaagctcatgtaaatcatggagatagtgatatcaattcaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36198" stop="39878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36498" g_stop="36794" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="411" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="485" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39578" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="591" r_length="106" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E447188" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E447188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36498" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACT</genome_strand>
        <mrna_strand>CTTTCTTCTGTTTCTCTACAGTTACTTGCAACTTTTTCTCCTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CACTCATCCTCCTCCAACTTTTGGTTCATCACCCAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTAAATCATGGAGATAGTGATATCAATTCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E483009" ref_strand="+" ref_description="SGN-E483009 [cSTE-6-J12]">
      <seq>ctacagttacttgcaactttttctccttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcactcatcctcctccaacttttggttcatcacccaatcttcaaggccttgaaattcatgatgataaagctcatgtaaatcatggagatagtgatatcaattcaacttcacggacaaccaggccaatgcacgagattactttttcaacaattgacaagccaaaaacgctcactcagttgaccaatataatttctgagattggtctgaacattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36213" stop="41556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36513" g_stop="36794" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="396" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="470" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39592" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="590" r_length="120" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145">
            <donor d_prob="0.018" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39738" g_stop="39792" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="645" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39793" i_stop="41218" i_length="1426">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41219" g_stop="41256" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="683" r_length="38" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E483009" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E483009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36513" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39592"/>
          <exon e_start="39738" e_stop="39792"/>
          <exon e_start="41219" e_stop="41256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAGGTTGAATTGCCTTATTTCTTGAGTTGAAGATGATAAGATCCATGATACTAGTTTGGCTTCATAGCTTTGATAGAAAGTGTATTTATTGTTCACAAAGGATTTCTAGTTGACTTTTCTTTCTTATGAGCCAAATGATTTTGTGCAGGCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAGGTGCCTTATTCTTTTAGGAATCCTCCTCCCTTTTTGTTCATAAATACATCTTTTATCTTCTCATAATCAAACAAAGACTATAGTTTCATGAATTTATCTTATGCAGAGCTAGTGTGAATTTAACCAGAAATAAGGCTAAGCCCCTCGAATTCCTGTTGTGTTGTGGATATTATGAGTCCAATATTTGACAGGAAAAAAGGTTAAATCCCTTGAATTCCTTTTTGTGGATGGATAGTACCGTACCTGTCATAGGACTCACCACATATAATAACTGAAGATAGACTCATTCTAGATTAATAAGCATGGATAGAATGACCTTTAGCTGAGTCGTTCAGCTGATATGATATGGTGTTTGATTTCTATTTCTCAAGTGCATAGTATAAGCATCTTAGTCAAGATAAAATTTGATAGAGAAGACTACTTGATTCACCCCCCCCCCCCCCAAACATGAAAAGGGTGATAGAAGACTACACTTAAGGGGAAACAGAGGATAATAAGGAAAAGTTGTTTTTATGGACCCACAGATTGATTCTTTGATTAACTTCTGCACCTAAGAGATGAGGGTGGGGTTAGTCAGTTAATACTAGGGATGGCAATAGGGCGTGGTGGGGTGGGTTTAAGGCTATGCACGGGGGGAGAGATGCGAGGCGGGTTGAAGTGGGTTTTTTAAAGCTAATGCGGGGCGGGGTGGGATGCGGGTATATGTGATTTTATATGGGTTCAAACCTAAAGCTACTAAAATATTCAAAATAATAAATGAAAATGTTTTAATAAAAATAATACGATTTCTTACATGTTTCCAGTTGATCTCTACAAAATAAAATTTTAAGTCATTATCTATTAAATTAATACAACTTTATGAAAAAATAATTTATTTTTATGAATTTTATTTTAGTATCAAAGTTAACCAGAAAAAGAAAATATTAAAAAAATTATGCGGGGCTGGGTGGAGCGGGTTGAAAATGGAAAGAAGTTGTAATACGGGATGGGCGGATTAAAAATTTTGCGGGTTAAGCTCAGCCCGCCTGCACTACCCCATTGCCATCCCTAGTTAATACCTAGCTTTGAAGAATATTTGTCTTCATGACTATCTGCTTTTCTGATACAATTATGTTCCAAAGTTAATATATGAAATTCTTATGTAAATGCTCAATAGTTGTACCTACAAATCTAACAGTCTCCGTAAAATATAGAGACAGTATACCTGGACCGAAATCTGTATCTTTTATTTGCTTTCTGTCTAGTGCAATTTAAGCTTATATCTCTGATTAGATTATTCATTCCTGTTCAGTCCTGGAAGTTATGTAACTTCATTAATCTGCAGATTCTGCCATATTTTCAGAGTTCTATCAAACATATTTATCTTACCATGTTAACTGTGTTCTCATCTTCTTTACTTGCACTGATGTCCATCCTGGATTTCCAGTTGACCAATATAATATCTGAGATTGGTCTGAACATTGA</genome_strand>
        <mrna_strand>CTACAGTTACTTGCAACTTTTTCTCCTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CACTCATCCTCCTCCAACTTTTGGTTCATCACCCAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTAAATCATGGAGATAGTGATATCAATTCAACTTCACGGACAACCAG.................................................................................................................................................GCCAATGCACGAGATTACTTTTTCAACAATTGACAAGCCAAAAACGCTCACTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAATATAATTTCTGAGATTGGTCTGAACATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482972" ref_strand="+" ref_description="SGN-E482972 [cSTE-6-B12]">
      <seq>ctacagttacttgcaactttttctccttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcactcatcctcctccaacttttggttcatcacccaatcttcaaggccttgaaattcatgatgataaagctcatgtaaatcatggagatagtgatatcaattcaacttcacggacaaccaggccaatgcacgagattactttttcaacaattgacaagccaaaaacgctcactcagttgaccaatataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36213" stop="41531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36513" g_stop="36794" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="396" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="470" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39592" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="590" r_length="120" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145">
            <donor d_prob="0.018" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39738" g_stop="39792" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="645" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39793" i_stop="41218" i_length="1426">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41219" g_stop="41231" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="658" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E482972" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482972" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36513" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39592"/>
          <exon e_start="39738" e_stop="39792"/>
          <exon e_start="41219" e_stop="41231"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAGGTTGAATTGCCTTATTTCTTGAGTTGAAGATGATAAGATCCATGATACTAGTTTGGCTTCATAGCTTTGATAGAAAGTGTATTTATTGTTCACAAAGGATTTCTAGTTGACTTTTCTTTCTTATGAGCCAAATGATTTTGTGCAGGCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAGGTGCCTTATTCTTTTAGGAATCCTCCTCCCTTTTTGTTCATAAATACATCTTTTATCTTCTCATAATCAAACAAAGACTATAGTTTCATGAATTTATCTTATGCAGAGCTAGTGTGAATTTAACCAGAAATAAGGCTAAGCCCCTCGAATTCCTGTTGTGTTGTGGATATTATGAGTCCAATATTTGACAGGAAAAAAGGTTAAATCCCTTGAATTCCTTTTTGTGGATGGATAGTACCGTACCTGTCATAGGACTCACCACATATAATAACTGAAGATAGACTCATTCTAGATTAATAAGCATGGATAGAATGACCTTTAGCTGAGTCGTTCAGCTGATATGATATGGTGTTTGATTTCTATTTCTCAAGTGCATAGTATAAGCATCTTAGTCAAGATAAAATTTGATAGAGAAGACTACTTGATTCACCCCCCCCCCCCCCAAACATGAAAAGGGTGATAGAAGACTACACTTAAGGGGAAACAGAGGATAATAAGGAAAAGTTGTTTTTATGGACCCACAGATTGATTCTTTGATTAACTTCTGCACCTAAGAGATGAGGGTGGGGTTAGTCAGTTAATACTAGGGATGGCAATAGGGCGTGGTGGGGTGGGTTTAAGGCTATGCACGGGGGGAGAGATGCGAGGCGGGTTGAAGTGGGTTTTTTAAAGCTAATGCGGGGCGGGGTGGGATGCGGGTATATGTGATTTTATATGGGTTCAAACCTAAAGCTACTAAAATATTCAAAATAATAAATGAAAATGTTTTAATAAAAATAATACGATTTCTTACATGTTTCCAGTTGATCTCTACAAAATAAAATTTTAAGTCATTATCTATTAAATTAATACAACTTTATGAAAAAATAATTTATTTTTATGAATTTTATTTTAGTATCAAAGTTAACCAGAAAAAGAAAATATTAAAAAAATTATGCGGGGCTGGGTGGAGCGGGTTGAAAATGGAAAGAAGTTGTAATACGGGATGGGCGGATTAAAAATTTTGCGGGTTAAGCTCAGCCCGCCTGCACTACCCCATTGCCATCCCTAGTTAATACCTAGCTTTGAAGAATATTTGTCTTCATGACTATCTGCTTTTCTGATACAATTATGTTCCAAAGTTAATATATGAAATTCTTATGTAAATGCTCAATAGTTGTACCTACAAATCTAACAGTCTCCGTAAAATATAGAGACAGTATACCTGGACCGAAATCTGTATCTTTTATTTGCTTTCTGTCTAGTGCAATTTAAGCTTATATCTCTGATTAGATTATTCATTCCTGTTCAGTCCTGGAAGTTATGTAACTTCATTAATCTGCAGATTCTGCCATATTTTCAGAGTTCTATCAAACATATTTATCTTACCATGTTAACTGTGTTCTCATCTTCTTTACTTGCACTGATGTCCATCCTGGATTTCCAGTTGACCAATATAA</genome_strand>
        <mrna_strand>CTACAGTTACTTGCAACTTTTTCTCCTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CACTCATCCTCCTCCAACTTTTGGTTCATCACCCAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTAAATCATGGAGATAGTGATATCAATTCAACTTCACGGACAACCAG.................................................................................................................................................GCCAATGCACGAGATTACTTTTTCAACAATTGACAAGCCAAAAACGCTCACTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482098" ref_strand="+" ref_description="SGN-E482098 [cSTD-20-L2]">
      <seq>gtttttttttttgtaatccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36240" stop="37375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36529" g_stop="36794" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="380" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E482098" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482098" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36529" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG</genome_strand>
        <mrna_strand>GTTTTTTTTTTTGT-AATCCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E486780" ref_strand="+" ref_description="SGN-E486780 [cSTE-23-A12]">
      <seq>ccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcactcatcctcctccaacttttggttcatcacccaatcttcaaggccttgaaattcatgatgataaagctcatgtaaatcatggagatagtgatatcaattcaacttcacggacaaccaggccaatgcacgagattactttttcaacaattgacaagccaaaaacgctcactcagttgaccaatataatttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36247" stop="41537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36547" g_stop="36794" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="363" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="437" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39592" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="557" r_length="120" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145">
            <donor d_prob="0.018" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39738" g_stop="39792" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="612" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39793" i_stop="41218" i_length="1426">
            <donor d_prob="0.982" d_score="0.98"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="41219" g_stop="41237" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="631" r_length="19" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E486780" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36547" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39592"/>
          <exon e_start="39738" e_stop="39792"/>
          <exon e_start="41219" e_stop="41237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAGGTTGAATTGCCTTATTTCTTGAGTTGAAGATGATAAGATCCATGATACTAGTTTGGCTTCATAGCTTTGATAGAAAGTGTATTTATTGTTCACAAAGGATTTCTAGTTGACTTTTCTTTCTTATGAGCCAAATGATTTTGTGCAGGCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAGGTGCCTTATTCTTTTAGGAATCCTCCTCCCTTTTTGTTCATAAATACATCTTTTATCTTCTCATAATCAAACAAAGACTATAGTTTCATGAATTTATCTTATGCAGAGCTAGTGTGAATTTAACCAGAAATAAGGCTAAGCCCCTCGAATTCCTGTTGTGTTGTGGATATTATGAGTCCAATATTTGACAGGAAAAAAGGTTAAATCCCTTGAATTCCTTTTTGTGGATGGATAGTACCGTACCTGTCATAGGACTCACCACATATAATAACTGAAGATAGACTCATTCTAGATTAATAAGCATGGATAGAATGACCTTTAGCTGAGTCGTTCAGCTGATATGATATGGTGTTTGATTTCTATTTCTCAAGTGCATAGTATAAGCATCTTAGTCAAGATAAAATTTGATAGAGAAGACTACTTGATTCACCCCCCCCCCCCCCAAACATGAAAAGGGTGATAGAAGACTACACTTAAGGGGAAACAGAGGATAATAAGGAAAAGTTGTTTTTATGGACCCACAGATTGATTCTTTGATTAACTTCTGCACCTAAGAGATGAGGGTGGGGTTAGTCAGTTAATACTAGGGATGGCAATAGGGCGTGGTGGGGTGGGTTTAAGGCTATGCACGGGGGGAGAGATGCGAGGCGGGTTGAAGTGGGTTTTTTAAAGCTAATGCGGGGCGGGGTGGGATGCGGGTATATGTGATTTTATATGGGTTCAAACCTAAAGCTACTAAAATATTCAAAATAATAAATGAAAATGTTTTAATAAAAATAATACGATTTCTTACATGTTTCCAGTTGATCTCTACAAAATAAAATTTTAAGTCATTATCTATTAAATTAATACAACTTTATGAAAAAATAATTTATTTTTATGAATTTTATTTTAGTATCAAAGTTAACCAGAAAAAGAAAATATTAAAAAAATTATGCGGGGCTGGGTGGAGCGGGTTGAAAATGGAAAGAAGTTGTAATACGGGATGGGCGGATTAAAAATTTTGCGGGTTAAGCTCAGCCCGCCTGCACTACCCCATTGCCATCCCTAGTTAATACCTAGCTTTGAAGAATATTTGTCTTCATGACTATCTGCTTTTCTGATACAATTATGTTCCAAAGTTAATATATGAAATTCTTATGTAAATGCTCAATAGTTGTACCTACAAATCTAACAGTCTCCGTAAAATATAGAGACAGTATACCTGGACCGAAATCTGTATCTTTTATTTGCTTTCTGTCTAGTGCAATTTAAGCTTATATCTCTGATTAGATTATTCATTCCTGTTCAGTCCTGGAAGTTATGTAACTTCATTAATCTGCAGATTCTGCCATATTTTCAGAGTTCTATCAAACATATTTATCTTACCATGTTAACTGTGTTCTCATCTTCTTTACTTGCACTGATGTCCATCCTGGATTTCCAGTTGACCAATATAATATCTG</genome_strand>
        <mrna_strand>CCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CACTCATCCTCCTCCAACTTTTGGTTCATCACCCAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTAAATCATGGAGATAGTGATATCAATTCAACTTCACGGACAACCAG.................................................................................................................................................GCCAATGCACGAGATTACTTTTTCAACAATTGACAAGCCAAAAACGCTCACTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAATATAATTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E484126" ref_strand="+" ref_description="SGN-E484126 [cSTE-12-M7]">
      <seq>ccattacaaagaggaggagattttgtaaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcggaagcagagcgatggagcccttgtcgccgaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactccaggatttgaatctcgaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcactcatcctcctccaacttttggttcatcacccaatcttcaaggccttgaaattcatgatgataaagctcatgtaaatcatggagatagtgatatcaattcaacttcacggacaaccaggccaatgcacgagattactttttcaacaattgacaagccaaaaacgctcactcagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36247" stop="40095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36547" g_stop="36794" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="363" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="437" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39592" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="557" r_length="120" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145">
            <donor d_prob="0.018" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39738" g_stop="39795" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="615" r_length="58" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E484126" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E484126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36547" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39592"/>
          <exon e_start="39738" e_stop="39795"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAGGTTGAATTGCCTTATTTCTTGAGTTGAAGATGATAAGATCCATGATACTAGTTTGGCTTCATAGCTTTGATAGAAAGTGTATTTATTGTTCACAAAGGATTTCTAGTTGACTTTTCTTTCTTATGAGCCAAATGATTTTGTGCAGGCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAGGTG</genome_strand>
        <mrna_strand>CCATTACAAAGAGGAGGAGATTTTGTAAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGAAGCAGAGCGATGGAGCCCTTGTCGCCGAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTCCAGGATTTGAATCTCGAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CACTCATCCTCCTCCAACTTTTGGTTCATCACCCAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTAAATCATGGAGATAGTGATATCAATTCAACTTCACGGACAACCAG.................................................................................................................................................GCCAATGCACGAGATTACTTTTTCAACAATTGACAAGCCAAAAACGCTCACTCAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271197" ref_strand="+" ref_description="SGN-E271197 [cLEM-5-M13]">
      <seq>cattacaaagaggaggagattttgtgaattctgtaattttgtatttgtgaatggcgatggacgacaacgagagttgcgggagcagagcgatggagcccttgtcgcccaagcaaaatcggctacagaggcagaagaatgaagtgtttaaccaagtgcttagtagactacaggatttgaatctccaagaggttaaactccctggctttgaagaccagctttggcttcactttaatcgcctccctgttcgttatgcatcggatgtaaatgtggaaagagcagaagatgtgctcatgcacaagaggttgctggacatagcggaggatcctgagaatagacctgcctttgatgtccgccttgtgcaggttcagcctatgtacactggaacgtcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcattcatcctcctccaacttttggttcatcaccaaatcttcaaggccttgaaattcatgatgataaagctcatgtgaatcatggagatagtgatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="36248" stop="39869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36548" g_stop="36794" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36949" g_stop="37063" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="362" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="436" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39473" g_stop="39569" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="533" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E271197" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36548" e_stop="36794"/>
          <exon e_start="36949" e_stop="37063"/>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCGGTTAACTTCATAAACCCTATCTTTCCTCATTTTTTTTAAAATTTTTTTTTGCCATTTGTTCTATTTTGTACTGGATAATTGAGTAATTAATCCATTTTCTGTCTCGGAAGTTTAAGTTTTGAAGTTTTTTGTTTCTGAATTTGGGTGCGTGCAGTTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAGGTTATACTCTTATCTGCTTTTCGTGCATTTTGATGTGTGTTTGCCTTGTAAATGCTTTTTTCTCTTGATAACTCTGAATATGGCATTTGAAAAACTTCTCCCTATGTATGTATGACAAGGTGGAATGTCTAATTTGCTCTTTTCTCTTGACAACTCTGGAAACCCATACCAAGTTGATATGATATTTGTAAAAACTTTTCCGTATGTATGACAAGGAAGAGTCTTTAATTTGATCGTAGCTGAACAAGTTGGGGATTTGATTCAATACGTAAAATGTTCCCGAGAAGCACAGCATCTATTATTTATTGCTTTTACAGTAGTCGAGAGCAGTTGCAAAAACTAGTAAATTTGCCAATAATCTTGTCAAAGCCATATTTTTATTTCTTTCATCCATCCCATACTTCTCTTTCATGCTACCTTAGGTTGGGCATGGAGAACTTTCTTTAGTGCTGCTGTTCATTTTTACATCTGTTACACTCTCCAATGACCAAATTAAAACCATTTAAAACATTCTCTTATCCTGATAGGCTTCAGTTTTCACATTTAAGGGGATTGAAGTTTGTGTTTCAAGTAGAAAGAGAAGATGCTGGAAGCCAAAAGATAAATGTTAATATAAAATTATGGATGTGAGATCATAGAAGATTTTAGATGGTCATATTCTGCAGAAAATGCAAGCAGCACTCATTGACGATAAAAAGAAAGAAGATTTGAAATGTTCATGTTGAAAACATAATTAAGTTAACAACGCTGTTTCTTCTCTATCAAGTTAAACATTTAAATCAAGGAAAATTTTCTGAGTTTGAGTCTTATTGTCACCAACAATCAAAAAGATTCTTTACATGCTTACCTCATGAAAAAGTCAAGATGAATGCAAGTGGGCATGTTGAGAACATAATTTAGTAAATGAAAGTGTCATTTTTAAAATAATTAAGCTTTTGGATAAAGTGGCCACACATTTCAACAGTTTACATTCAACAGAGAGTGCAAGTAGGACTCATAGAGGATAAAAGGAGAAAAACTACTTGAGATTAAAGACGAGTTAGACTTATAATCACATGGAGGGAAATTGTACCTATAGACTTACAATTTTTCTGAATCATGTGGATGAAGCTAATGATGGAACACAATGAAAGCAAAAGTATCCATATTAGTGGTACTAATATGTTAGCAGTAAAATTTAGTTTTTTTAATCTTCCTCTTGCATTAGTGTTCGTGTTTGCTAGGAGTATTATTATTCTGGTCAGAGACTTATCTTGGTGCCAATGTAGAGAGTTGTTAATCTCACAACCAGTTGTGTTTGTAACAGTAATATAAAAATATGGATGCTCATTACAGAATAGGTACACTGGATTGACTTGTTTGAAGAAAGTTTAATGGATATCATATTTGTTAATAAGATAGGAGATGTTCTGTAATTGGTTCACCTTGGGCACATCTCCGTTGATGGCAATAGGGTGTTATGCAAAGAGCAAGGTGTGTGTTGAAGGTAATGAGGGGAATAAGATAAAATTGGTCGTTCTTAGTATAGAGGCTACAAGCCTTTGTGATTTGTGGGTGATGGATTAGCAATATGGGAAGTCGAATGGGTTCTTAAGTCTTGTAATTAGACCGTACATCTAAAGGCATGAATACTTTGAGAAGAGAATATGGGATTGACATTTACTCATGCCCTTTAGATCATATGAGATCTTTAAGAGGGTATGAATTATATGTAAACCTACTGTAAAAGTGATTTTGATATCTCCTCAATATCCTAAGACAACTTGAGGTTAGACTTGTATTGAAGAAATTTAGATCTCTAGGCCATTCCTCTAAGAGAAAAGAATTTTTTTATTAAATCTTAGCAAATCAATGGAATAGCTATTTATATAAAAGAATTCACAAAATGGCTACAAATGACTAACCAGTCAAATATTTGAGCATGTAATAATCCGTGACCAGCTTTGACTGTGGTTGAAACAGTTGCACCATAACAGGATCCAATTGGATATATCTTGAAAGTCCTGGGAAATCTTGGAAAATAATGTAGAAAGGATAGTCTCTTAGTACATATTCCTGTACTAATATTGGAATATATATTGTAAACCAACAGAAAAGAGAATGCAAGTCATGGCCTGGCCTAAGACAAGTACTTTATAATTTCAAGAGATTCTTGTTACATGCATGTTCTCATTTTTAAGTTCATAATGCAGGTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATC</genome_strand>
        <mrna_strand>CATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG..........................................................................................................................................................TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E458745" ref_strand="+" ref_description="SGN-E458745 [cPRO-7-A18]">
      <seq>gttcatcctatgtacactggagcatcaaccaatactgttgatgtagatccttcagttaatgaagaaatcccaagcattcatcctcctccaacttttggttcatcacccaatcttcaaggccttgaaattcatgatgataaagctcatgcaaatcatggagatagtgatatcaattcaacttcacggacaaccaggccaatgcatgagattactttttcaacaattgacaagccaaaaacgctcactcagttgaccaatataatttctgagattggtctgaacattgaagaggctcatgttttttcaactactgacggtttctccttggatgtctttgtggttgatggatggccatatgaggagacggagttgcttaagagtgaggtgcaaaaggaaattatgaggagcaaggagcagccacaggtcctgcctccaatcaatgagccaggtcaaacatctgaatcagtctccgatagtgtaaaaatacctactgatggatcagatgactgggaaattgacatccgcctgctgaaatttgaaaacaaagtagcatctgggtcatttggagatctgtataaaggcacatactgtagccaggaagtggctataaaagttctcaagcctgaaaatttgaatatggatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="38956" stop="43916"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39256" g_stop="39329" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.714" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39473" g_stop="39592" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="194" r_length="120" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145">
            <donor d_prob="0.018" d_score="0.94"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39738" g_stop="39792" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="249" r_length="55" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39793" i_stop="41218" i_length="1426">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.905" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41219" g_stop="41329" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="360" r_length="111" r_score="0.964"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41330" i_stop="42002" i_length="673">
            <donor d_prob="0.943" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="42003" g_stop="42053" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="411" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="42054" i_stop="43307" i_length="1254">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="43308" g_stop="43468" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="572" r_length="161" r_score="0.957"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="43469" i_stop="43544" i_length="76">
            <donor d_prob="0.235" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="43545" g_stop="43616" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="573" r_stop="644" r_length="72" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E458745" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39256" e_stop="39329"/>
          <exon e_start="39473" e_stop="39592"/>
          <exon e_start="39738" e_stop="39792"/>
          <exon e_start="41219" e_stop="41329"/>
          <exon e_start="42003" e_stop="42053"/>
          <exon e_start="43308" e_stop="43468"/>
          <exon e_start="43545" e_stop="43616"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAGGTATGCTCTTTAGTTTAAGAATTTAAGTTTTTCTTTTTTTCAGTATAACTTCTTTCTGTATATTACTTCTGCACATTTGTTTTTTCTCTATTGTGCTTCGTTAAATCATTTAATTTATGGGCTTCCATATTGTCCCTCTCCAGCATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAGGTTGAATTGCCTTATTTCTTGAGTTGAAGATGATAAGATCCATGATACTAGTTTGGCTTCATAGCTTTGATAGAAAGTGTATTTATTGTTCACAAAGGATTTCTAGTTGACTTTTCTTTCTTATGAGCCAAATGATTTTGTGCAGGCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAGGTGCCTTATTCTTTTAGGAATCCTCCTCCCTTTTTGTTCATAAATACATCTTTTATCTTCTCATAATCAAACAAAGACTATAGTTTCATGAATTTATCTTATGCAGAGCTAGTGTGAATTTAACCAGAAATAAGGCTAAGCCCCTCGAATTCCTGTTGTGTTGTGGATATTATGAGTCCAATATTTGACAGGAAAAAAGGTTAAATCCCTTGAATTCCTTTTTGTGGATGGATAGTACCGTACCTGTCATAGGACTCACCACATATAATAACTGAAGATAGACTCATTCTAGATTAATAAGCATGGATAGAATGACCTTTAGCTGAGTCGTTCAGCTGATATGATATGGTGTTTGATTTCTATTTCTCAAGTGCATAGTATAAGCATCTTAGTCAAGATAAAATTTGATAGAGAAGACTACTTGATTCACCCCCCCCCCCCCCAAACATGAAAAGGGTGATAGAAGACTACACTTAAGGGGAAACAGAGGATAATAAGGAAAAGTTGTTTTTATGGACCCACAGATTGATTCTTTGATTAACTTCTGCACCTAAGAGATGAGGGTGGGGTTAGTCAGTTAATACTAGGGATGGCAATAGGGCGTGGTGGGGTGGGTTTAAGGCTATGCACGGGGGGAGAGATGCGAGGCGGGTTGAAGTGGGTTTTTTAAAGCTAATGCGGGGCGGGGTGGGATGCGGGTATATGTGATTTTATATGGGTTCAAACCTAAAGCTACTAAAATATTCAAAATAATAAATGAAAATGTTTTAATAAAAATAATACGATTTCTTACATGTTTCCAGTTGATCTCTACAAAATAAAATTTTAAGTCATTATCTATTAAATTAATACAACTTTATGAAAAAATAATTTATTTTTATGAATTTTATTTTAGTATCAAAGTTAACCAGAAAAAGAAAATATTAAAAAAATTATGCGGGGCTGGGTGGAGCGGGTTGAAAATGGAAAGAAGTTGTAATACGGGATGGGCGGATTAAAAATTTTGCGGGTTAAGCTCAGCCCGCCTGCACTACCCCATTGCCATCCCTAGTTAATACCTAGCTTTGAAGAATATTTGTCTTCATGACTATCTGCTTTTCTGATACAATTATGTTCCAAAGTTAATATATGAAATTCTTATGTAAATGCTCAATAGTTGTACCTACAAATCTAACAGTCTCCGTAAAATATAGAGACAGTATACCTGGACCGAAATCTGTATCTTTTATTTGCTTTCTGTCTAGTGCAATTTAAGCTTATATCTCTGATTAGATTATTCATTCCTGTTCAGTCCTGGAAGTTATGTAACTTCATTAATCTGCAGATTCTGCCATATTTTCAGAGTTCTATCAAACATATTTATCTTACCATGTTAACTGTGTTCTCATCTTCTTTACTTGCACTGATGTCCATCCTGGATTTCCAGTTGACCAATATAATATCTGAGATTGGTCTGAACATTGAAGAGGCCCATGTTTTTTCAACTACTGATGGTTTCTCCTTGGATGTCTTTGTGGTTGATGGATGGCCGTATGAGGTACAGAATTAATGTTCCTCTTGAGATATAATGAAAGGCTGACTAGCAGTTTAGCAGTCATTTCTTAGCTTTAGTTTGTCATTTCTTGTTAACAAGGTTAAGTTTTTGAAATTATGTTCCTTGATCATTTAGTAGATTATGTGTTAGTTTTAGCCCTGTTTTTTCGTCCTCATGTCCCAGTATATATGGCTCCCATCAATTTTGGACAGCCCTGAAATATTTGACACCGTTTCATTCCTATACATCTTTCAATAATTCAAACTCATCAAACTTCTAAACTCTGAACTGTGATGTGATTTCTTTTTCCATCAAATGTTTAAACCAACTTTGTTGGCATACCTTAGTATATATTCTTCTACTGTTAGTAATATAGTAATATATATCAAACTAAAATCTATGATATGTCCAGTGTGAAATATTGTTATATACTATGAGATGGTGAGGATGAACAACTATAGTACTGATAAGTGATAACTTTCTCATTCTAGTCATATTTTTCAACTAGATATATTTTCTCTTAATAGGTTGTTCAAACCTTGAGATGTTATTTGGTGAATTGAGGATCTAGTATATTTTTAAAATGGAAGTTTGGAAATTCAACCCCTCGTTCTTCTTCTTTTCCCTTTTGTAGTAATTTACTTTTATACTTATTCATCTGTGTTTGAAATTCTAGGAGACGGAGTTGCTTAAGAGTGAGGTGCAAAAGGAAGTTATGAGGAGCAAGGTAGATATTAATTCTGGCACTCAATATTATCTACTTAATATGATTTATGTGGCTATCTTCAAATGCTGATCTTGCTGTATTGTCTTCATAATGGTGCTATGCATTTTATAGTTAATGTATGTTGTCCACTTAGTTATTAAGATCAGATTTTTTTTAAAAAAAATACTCAAAATATATATTCTATGAATTTCTGGCTCACTTTTGCTAGTCTGATGCTTTCCATGAGTAAGATAGCATACTTAACAATCGTATTAATATTCCAGACAAATTTATTGAAGAGAGTTGTTATTTCTACTACAGTAATGCTGTTAATGCTCTGTTGCTAACTCTCCCCGAATTAGTTTCAGTTATTGCAGACACAGCTATAGCTCAAGTAAGTTTTGACATCAACTGAATTTATGGTTCATATATGTATTGCATAGCAGGTTTAGAAGTCATGCAGATATTCTCTAACATCCTGCTTCACAGCGCATAACGGAGGTCCTAAGGTTACATCTGAAAAAAGAAATGTGAATCCTCACAGTAAATTTTAAAGCTCAACTTAATAATTACTTGACAACTTGGGCTCAAATGCCTGACAAAATCGTAGGTTGGTAGGATACTTATGTTAAATGGGCTTGTAAGAAAACAAAACGAGAAAATGATCAAAAGCCCCCCAACCTATACACGAAATCCAACTACACACTCCAACTACACGGGTGTCCCATTACCCACCTAAACTATATTTTTATCTATTTTTTACCCACCTAAGTGCTGACCTGTCATGGGAGGTGTTGTCACCGCCTCTAGGCGCGTTTGAAGCAAAATTTGACGAAAAATTTCCCCCTTCTCCTACAGTCGTCTGCCCCACTTTTAAATACCCATTACTTCTTCTTCCCCCACCATTAATCCTTGGTTATAAAATGATAGAAGGAATCAAAACAATAACTATGCCTCAATCCAGTCAAGTTGGGGTCAGTTGTATGGATCACTAACCTTATATTTAAGCTCATCTCAAATCTATGTTGTCAAATAGAAATAAAAAGTACTAACAGTTCACTGTTTTTCCTACTAGCATATAAGCCTTTGACACGACCCTGAGGACTCCTAAAGCATAGGAGGATAAACTTTCGTAACTGACTAAAACATAATTCCAACTGAACTTACTAATTGTAGGTTCAAATTTGAACAAGTTTTCTTTTATAGTTTTCTAGATTTTGATTATCATATTGAACAGATGGTCTCAGTGCTTTGTCTTCTGGTAATGTTTTTCAGGAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCTGTATGAGCCAACAATCCATATCTTGATTTCCAGATGAGTTTGTTGAGTCGGTGGACTTATACTGTGTCTTTTTCAGGTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATAT</genome_strand>
        <mrna_strand>GTTCATCCTATGTACACTGGAGCATCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG...............................................................................................................................................CATTCATCCTCCTCCAACTTTTGGTTCATCACCCAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGCAAATCATGGAGATAGTGATATCAATTCAACTTCACGGACAACCAG.................................................................................................................................................GCCAATGCATGAGATTACTTTTTCAACAATTGACAAGCCAAAAACGCTCACTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGACCAATATAATTTCTGAGATTGGTCTGAACATTGAAGAGGCTCATGTTTTTTCAACTACTGACGGTTTCTCCTTGGATGTCTTTGTGGTTGATGGATGGCCATATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACGGAGTTGCTTAAGAGTGAGGTGCAAAAGGAAATTATGAGGAGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCCACAGGTCCTGCCTCCAATCAATGAGCCAGGTCAAACATCTGAATCAGTCTCCGATAGTGTAAAAATACCTACTGATGGATCAGATGACTGGGAAATTGACATCCGCCTGCTGAAATTTGAAAACAAAGTAGCATCTGGGTCATTTGGAGATCT............................................................................GTATAAAGGCACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390539" ref_strand="+" ref_description="SGN-E390539 [TUS-44-A15]">
      <seq>gaagttatgaggagcaaggagcagccacaagtcctgcctccaatcagtgaaccaggtcaaacatctgaatcaggctccgatagtgtaaaaatacctactgatggatctgatgactgggaaattgatatccgcctgctgaaatttgaaaataaagtagcatctgggtcatttggagatctgtataaaggtacatactgtagccaggaagtggctataaaagttctcaagcctgaaaatttgaatatggatatggtaaaagagttctctcaagaggtctttatcatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctcccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaactggggtgatgacagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="41736" stop="46499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42036" g_stop="42053" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42054" i_stop="43307" i_length="1254">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43308" g_stop="43468" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="179" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43469" i_stop="43544" i_length="76">
            <donor d_prob="0.235" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43545" g_stop="43652" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="287" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="361" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="537" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="633" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46126" g_stop="46199" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="707" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E390539" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42036" e_stop="42053"/>
          <exon e_start="43308" e_stop="43468"/>
          <exon e_start="43545" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTATGAGGAGCAAGGTAGATATTAATTCTGGCACTCAATATTATCTACTTAATATGATTTATGTGGCTATCTTCAAATGCTGATCTTGCTGTATTGTCTTCATAATGGTGCTATGCATTTTATAGTTAATGTATGTTGTCCACTTAGTTATTAAGATCAGATTTTTTTTAAAAAAAATACTCAAAATATATATTCTATGAATTTCTGGCTCACTTTTGCTAGTCTGATGCTTTCCATGAGTAAGATAGCATACTTAACAATCGTATTAATATTCCAGACAAATTTATTGAAGAGAGTTGTTATTTCTACTACAGTAATGCTGTTAATGCTCTGTTGCTAACTCTCCCCGAATTAGTTTCAGTTATTGCAGACACAGCTATAGCTCAAGTAAGTTTTGACATCAACTGAATTTATGGTTCATATATGTATTGCATAGCAGGTTTAGAAGTCATGCAGATATTCTCTAACATCCTGCTTCACAGCGCATAACGGAGGTCCTAAGGTTACATCTGAAAAAAGAAATGTGAATCCTCACAGTAAATTTTAAAGCTCAACTTAATAATTACTTGACAACTTGGGCTCAAATGCCTGACAAAATCGTAGGTTGGTAGGATACTTATGTTAAATGGGCTTGTAAGAAAACAAAACGAGAAAATGATCAAAAGCCCCCCAACCTATACACGAAATCCAACTACACACTCCAACTACACGGGTGTCCCATTACCCACCTAAACTATATTTTTATCTATTTTTTACCCACCTAAGTGCTGACCTGTCATGGGAGGTGTTGTCACCGCCTCTAGGCGCGTTTGAAGCAAAATTTGACGAAAAATTTCCCCCTTCTCCTACAGTCGTCTGCCCCACTTTTAAATACCCATTACTTCTTCTTCCCCCACCATTAATCCTTGGTTATAAAATGATAGAAGGAATCAAAACAATAACTATGCCTCAATCCAGTCAAGTTGGGGTCAGTTGTATGGATCACTAACCTTATATTTAAGCTCATCTCAAATCTATGTTGTCAAATAGAAATAAAAAGTACTAACAGTTCACTGTTTTTCCTACTAGCATATAAGCCTTTGACACGACCCTGAGGACTCCTAAAGCATAGGAGGATAAACTTTCGTAACTGACTAAAACATAATTCCAACTGAACTTACTAATTGTAGGTTCAAATTTGAACAAGTTTTCTTTTATAGTTTTCTAGATTTTGATTATCATATTGAACAGATGGTCTCAGTGCTTTGTCTTCTGGTAATGTTTTTCAGGAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCTGTATGAGCCAACAATCCATATCTTGATTTCCAGATGAGTTTGTTGAGTCGGTGGACTTATACTGTGTCTTTTTCAGGTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGAC</genome_strand>
        <mrna_strand>GAAGTTATGAGGAGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCT............................................................................GTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377945" ref_strand="+" ref_description="SGN-E377945 [TUS-20-B6]">
      <seq>aagttatgaggagcaaggagcagccacaagtcctgcctccaatcagtgaaccaggtcaaacatctgaatcaggctccgatagtgtaaaaatacctactgatggatctgatgactgggaaattgatatccgcctgctgaaatttgaaaataaagtagcatctgggtcatttggagatctgtataaaggtacatactgtagccaggaagtggctataaaagttctcaagcctgaaaatttgaatatggatatggtaaaagagttctctcaagaggtctttatcatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctcccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaactggggtgatgacagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgactggagaaattccatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="41737" stop="46508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42037" g_stop="42053" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42054" i_stop="43307" i_length="1254">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43308" g_stop="43468" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="178" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43469" i_stop="43544" i_length="76">
            <donor d_prob="0.235" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43545" g_stop="43652" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="286" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="360" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="536" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="632" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="713" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="46291" g_stop="46300" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="723" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E377945" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377945" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42037" e_stop="42053"/>
          <exon e_start="43308" e_stop="43468"/>
          <exon e_start="43545" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTATGAGGAGCAAGGTAGATATTAATTCTGGCACTCAATATTATCTACTTAATATGATTTATGTGGCTATCTTCAAATGCTGATCTTGCTGTATTGTCTTCATAATGGTGCTATGCATTTTATAGTTAATGTATGTTGTCCACTTAGTTATTAAGATCAGATTTTTTTTAAAAAAAATACTCAAAATATATATTCTATGAATTTCTGGCTCACTTTTGCTAGTCTGATGCTTTCCATGAGTAAGATAGCATACTTAACAATCGTATTAATATTCCAGACAAATTTATTGAAGAGAGTTGTTATTTCTACTACAGTAATGCTGTTAATGCTCTGTTGCTAACTCTCCCCGAATTAGTTTCAGTTATTGCAGACACAGCTATAGCTCAAGTAAGTTTTGACATCAACTGAATTTATGGTTCATATATGTATTGCATAGCAGGTTTAGAAGTCATGCAGATATTCTCTAACATCCTGCTTCACAGCGCATAACGGAGGTCCTAAGGTTACATCTGAAAAAAGAAATGTGAATCCTCACAGTAAATTTTAAAGCTCAACTTAATAATTACTTGACAACTTGGGCTCAAATGCCTGACAAAATCGTAGGTTGGTAGGATACTTATGTTAAATGGGCTTGTAAGAAAACAAAACGAGAAAATGATCAAAAGCCCCCCAACCTATACACGAAATCCAACTACACACTCCAACTACACGGGTGTCCCATTACCCACCTAAACTATATTTTTATCTATTTTTTACCCACCTAAGTGCTGACCTGTCATGGGAGGTGTTGTCACCGCCTCTAGGCGCGTTTGAAGCAAAATTTGACGAAAAATTTCCCCCTTCTCCTACAGTCGTCTGCCCCACTTTTAAATACCCATTACTTCTTCTTCCCCCACCATTAATCCTTGGTTATAAAATGATAGAAGGAATCAAAACAATAACTATGCCTCAATCCAGTCAAGTTGGGGTCAGTTGTATGGATCACTAACCTTATATTTAAGCTCATCTCAAATCTATGTTGTCAAATAGAAATAAAAAGTACTAACAGTTCACTGTTTTTCCTACTAGCATATAAGCCTTTGACACGACCCTGAGGACTCCTAAAGCATAGGAGGATAAACTTTCGTAACTGACTAAAACATAATTCCAACTGAACTTACTAATTGTAGGTTCAAATTTGAACAAGTTTTCTTTTATAGTTTTCTAGATTTTGATTATCATATTGAACAGATGGTCTCAGTGCTTTGTCTTCTGGTAATGTTTTTCAGGAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCTGTATGAGCCAACAATCCATATCTTGATTTCCAGATGAGTTTGTTGAGTCGGTGGACTTATACTGTGTCTTTTTCAGGTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATG</genome_strand>
        <mrna_strand>AAGTTATGAGGAGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCT............................................................................GTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA....................................................................................ATTCCATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E233178" ref_strand="+" ref_description="SGN-E233178 [cLED-6-F21]">
      <seq>aagttatgaggagcaaggagcagccacaagtcctgcctccaatcagtgaaccaggtcaaacatctgaatcaggctccgatagtgtaaaaatacctactgatggatctgatgactgggaaattgatatccgcctgctgaaatttgaaaataaagtagcatctgggtcatttggagatctgtataaaggtacatactgtagccaggaagtggctataaaagttctcaagcctgaaaatttgaatatggatatggtaaaagagttctctcaagaggtctttatcatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctcccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaagttggtgactttggggttgctagaatgcagactcaaactggggtgatgacagctgaaactggaacgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="41737" stop="45747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42037" g_stop="42053" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42054" i_stop="43307" i_length="1254">
            <donor d_prob="0.983" d_score="0.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43308" g_stop="43468" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="178" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43469" i_stop="43544" i_length="76">
            <donor d_prob="0.235" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43545" g_stop="43652" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="286" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="360" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="536" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45370" g_stop="45447" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="614" r_length="78" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E233178" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42037" e_stop="42053"/>
          <exon e_start="43308" e_stop="43468"/>
          <exon e_start="43545" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTATGAGGAGCAAGGTAGATATTAATTCTGGCACTCAATATTATCTACTTAATATGATTTATGTGGCTATCTTCAAATGCTGATCTTGCTGTATTGTCTTCATAATGGTGCTATGCATTTTATAGTTAATGTATGTTGTCCACTTAGTTATTAAGATCAGATTTTTTTTAAAAAAAATACTCAAAATATATATTCTATGAATTTCTGGCTCACTTTTGCTAGTCTGATGCTTTCCATGAGTAAGATAGCATACTTAACAATCGTATTAATATTCCAGACAAATTTATTGAAGAGAGTTGTTATTTCTACTACAGTAATGCTGTTAATGCTCTGTTGCTAACTCTCCCCGAATTAGTTTCAGTTATTGCAGACACAGCTATAGCTCAAGTAAGTTTTGACATCAACTGAATTTATGGTTCATATATGTATTGCATAGCAGGTTTAGAAGTCATGCAGATATTCTCTAACATCCTGCTTCACAGCGCATAACGGAGGTCCTAAGGTTACATCTGAAAAAAGAAATGTGAATCCTCACAGTAAATTTTAAAGCTCAACTTAATAATTACTTGACAACTTGGGCTCAAATGCCTGACAAAATCGTAGGTTGGTAGGATACTTATGTTAAATGGGCTTGTAAGAAAACAAAACGAGAAAATGATCAAAAGCCCCCCAACCTATACACGAAATCCAACTACACACTCCAACTACACGGGTGTCCCATTACCCACCTAAACTATATTTTTATCTATTTTTTACCCACCTAAGTGCTGACCTGTCATGGGAGGTGTTGTCACCGCCTCTAGGCGCGTTTGAAGCAAAATTTGACGAAAAATTTCCCCCTTCTCCTACAGTCGTCTGCCCCACTTTTAAATACCCATTACTTCTTCTTCCCCCACCATTAATCCTTGGTTATAAAATGATAGAAGGAATCAAAACAATAACTATGCCTCAATCCAGTCAAGTTGGGGTCAGTTGTATGGATCACTAACCTTATATTTAAGCTCATCTCAAATCTATGTTGTCAAATAGAAATAAAAAGTACTAACAGTTCACTGTTTTTCCTACTAGCATATAAGCCTTTGACACGACCCTGAGGACTCCTAAAGCATAGGAGGATAAACTTTCGTAACTGACTAAAACATAATTCCAACTGAACTTACTAATTGTAGGTTCAAATTTGAACAAGTTTTCTTTTATAGTTTTCTAGATTTTGATTATCATATTGAACAGATGGTCTCAGTGCTTTGTCTTCTGGTAATGTTTTTCAGGAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCTGTATGAGCCAACAATCCATATCTTGATTTCCAGATGAGTTTGTTGAGTCGGTGGACTTATACTGTGTCTTTTTCAGGTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTAT</genome_strand>
        <mrna_strand>AAGTTATGAGGAGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCT............................................................................GTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAAGTTGGTGACTTTGGGGTTGCTAGAATGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306642" ref_strand="+" ref_description="SGN-E306642 [cLEY-19-F11]">
      <seq>gaaataaagtatcatctgggtcatttggagatctgtatggaggtacatactgtagccaggaagtggctataaaagttctcaagcctgaaaatttgaatatggatatggtaaaagagttctctcaagaggtctttatcatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctcccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaactggggtgatgacagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="43136" stop="46451"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43435" g_stop="43468" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43469" i_stop="43544" i_length="76">
            <donor d_prob="0.235" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43545" g_stop="43652" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="142" r_length="108" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="216" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="392" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="488" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46126" g_stop="46151" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="514" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E306642" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43435" e_stop="43468"/>
          <exon e_start="43545" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATAAAGTAGCATCTGGGTCATTTGGAGATCTGTATGAGCCAACAATCCATATCTTGATTTCCAGATGAGTTTGTTGAGTCGGTGGACTTATACTGTGTCTTTTTCAGGTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCA</genome_strand>
        <mrna_strand>GAAATAAAGTATCATCTGGGTCATTTGGAGATCT............................................................................GTATGGAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E307463" ref_strand="+" ref_description="SGN-E307463 [cLEY-12-B20]">
      <seq>aataaagtagcatctgggtcatttggagatctgtatgaaggtacatactgtagccaggaagtggctataaaagttctcaagcctgaaaatttgaatatggatatggtaaaagagttctctcaagaggtctttatcatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctcccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaactggggtgatgacagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgactggagaaattccatatgcatacttaacaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="43137" stop="46615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43437" g_stop="43468" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43469" i_stop="43544" i_length="76">
            <donor d_prob="0.235" d_score="0.00"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43545" g_stop="43652" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="140" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="214" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="390" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="486" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="567" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46291" g_stop="46315" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="592" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E307463" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E307463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43437" e_stop="43468"/>
          <exon e_start="43545" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAAGTAGCATCTGGGTCATTTGGAGATCTGTATGAGCCAACAATCCATATCTTGATTTCCAGATGAGTTTGTTGAGTCGGTGGACTTATACTGTGTCTTTTTCAGGTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATGCATACTTAACACCAT</genome_strand>
        <mrna_strand>AATAAAGTAGCATCTGGGTCATTTGGAGATCT............................................................................GTATGAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA....................................................................................ATTCCATATGCATACTTAACACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E570778" ref_strand="+" ref_description="SGN-E570778 [15416]">
      <seq>agttctcaagcctgaaaatttgaatatggatatggtaaaagagttctctcaagaggtctttatcatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctccgaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagctatctgcaccaaaataacataattcatcgggatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaacaggggtgatgactgcagaaactggaacatatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgactggagcaaattccatatgcgtacttaacaccattacaagcagcaataggtgtggtgcaacagcggtctacgggcaacaattcctaaggcactcatccaaagcttgctgaacttcttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="43284" stop="46792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43584" g_stop="43652" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="143" r_length="74" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="319" r_length="176" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="415" r_length="96" r_score="0.958"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="497" r_length="82" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46291" g_stop="46344" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="551" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46436" g_stop="46492" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="608" r_length="57" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E570778" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E570778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43584" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46344"/>
          <exon e_start="46436" e_stop="46492"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAG-AAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAG-GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAA</genome_strand>
        <mrna_strand>AGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCGAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGCTATCTGCACCAAAATAACATAATTCATCGGGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACAGGGGTGATGACTGCAGAAACTGGAACATATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGCAA....................................................................................ATTCCATATGCGTACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG...........................................................................................CGGTCTACGGGCAACAATTCCTAAG-GCACTCATCCAAAGCTTGCTGAACTTCTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243521" ref_strand="+" ref_description="SGN-E243521 [cLED-34-J22]">
      <seq>gttctctcaagaggtctttatcatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctcccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaactggggtgatgacagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgactggagaaattccatatgcatacttaacaccattacaagcagcaataggtgtggtgcaacagggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="43326" stop="46801"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43626" g_stop="43652" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="0.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="101" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="277" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="373" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="454" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46291" g_stop="46344" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="508" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="46436" g_stop="46501" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="574" r_length="66" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E243521" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43626" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46344"/>
          <exon e_start="46436" e_stop="46501"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGG</genome_strand>
        <mrna_strand>GTTCTCTCAAGAGGTCTTTATCATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA....................................................................................ATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241968" ref_strand="+" ref_description="SGN-E241968 [cLED-27-M11]">
      <seq>gttctctcaagaggtctttatgatgaggaaaattcggcacaaaaatgttgttcaatttataggggcatgcacacgacctcccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatacttttttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaactggggtgatgacagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgactggagaaattccatatgcatacttaacaccattacaagcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="43326" stop="46625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43626" g_stop="43652" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43653" i_stop="44159" i_length="507">
            <donor d_prob="0.209" d_score="0.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44160" g_stop="44233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="101" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.737" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="277" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="373" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="454" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46291" g_stop="46325" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="489" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E241968" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241968" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43626" e_stop="43652"/>
          <exon e_start="44160" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTCTCAAGAGGTCTTTATCATGAGGTGTGTCTGTTGTACTATCATGGTTGAGAATCCCTTTCAGCATAACTTCACTATTGTTCAAGTATATTAGAGAATCTTTCCATAGTTAAAAGTCTATTTGAGGGATTGTTTTTTTACTCCTAGATAGAGTCGTACTCTATTGAAAAAATTTGTTCTGTGCCACTAGAGATCTTACAATATTTTACTCTTGCCGTGTAAATTGAATGTCCTGTTTCCTTTATACTTTGTTGAGTCACTAGGTATTTCTTCTTTATGCGGATCTCAGCTATTTTGTTTTCTTTTTAGTGGCATTAGGCTATTTGGATGAAAAGGATGGATCATACATAATGCTAGGGACTAGGTTCTGCCAGTCACACTTAAAGTCTTGGAATAATTACAAATTTAAACATTAGTGGATATGTGAATTTGAATTTTATAACTAAATTTGTGTTTATCAGTCCAACGTCCTATTTCTTGTTTCTAAATTTCTTTCACCAAGTTTTGAGATCTTGTCTCGCTATGTTTTAGGAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATGCATACTTAACACCATTACAAGCAGC</genome_strand>
        <mrna_strand>GTTCTCTCAAGAGGTCTTTATGATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA....................................................................................ATTCCATATGCATACTTAACACCATTACAAGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E266035" ref_strand="+" ref_description="SGN-E266035 [cLEI-6-P2]">
      <seq>ccaacctgtgcatcgtgacagagttcatgaccagaggaagcatctatactgggtttgcacaagcaaagaggtgcttttaagcttcctactctcctgaaggttgcaattgatgtttctaagggaatgagttatctgcaccaaaataacataattcatcgtgatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaactggggtgatgacagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgactggagaaattccatatgcatacttaacaccattacaagcagcaataggtgtggtgcaacagggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="43913" stop="46818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44213" g_stop="44233" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44234" i_stop="44511" i_length="278">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.737" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44512" g_stop="44687" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="198" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="294" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="375" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46291" g_stop="46344" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="429" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46436" g_stop="46518" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="512" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E266035" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44213" e_stop="44233"/>
          <exon e_start="44512" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46344"/>
          <exon e_start="46436" e_stop="46518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACCTGTGCATCGTGACAGGTATATTTCAAGATTTTATATATTTAAAGTGAACTTCTAAGTCGGTTAATAAATTGGAGAAACTGTTTGTTCTCTGTTGAATACTGTTATATAATGTTCGCCGGCAGATACGTAGTGTTTAATATGCAGAGGTGTGCTTTTATTCATTTTCCAAATTTTGAATTTTCTCCTCACACTACTGCACTTGAATGGCAGCTTATGTTTGTAACTTTTTGGTGTACCTCTATCCTTCTTCATCACGTTAATGACAAGGTGCATCTGATAATTTTATTGATCAGAGTTCATGACCAGAGGAAGCATCTATACT-TTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACA</genome_strand>
        <mrna_strand>CCAACCTGTGCATCGTGACAG......................................................................................................................................................................................................................................................................................AGTTCATGACCAGAGGAAGCATCTATACTGGGTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA....................................................................................ATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E557518" ref_strand="+" ref_description="SGN-E557518 [16329]">
      <seq>gctatctgcaccaaaataacataattcatcgggatctgaagactgccaatcttctgatggatgaacatggagttgttaaggttggtgactttggggttgctagagtgcagactcaaacagggcgtgatgactgcagaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccacaaggctgatgttttcagctttggtatagtgctgtgggaacttctgactggagaaattccatatgcgtacttaacaccattacaagcagcaataggtgtggtgcaacagggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaactcagagaccagatttctcggagattttggatattctgaagcaactaactagggaggttggagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="44317" stop="46875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44617" g_stop="44687" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44688" i_stop="45369" i_length="682">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45370" g_stop="45465" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="168" r_length="97" r_score="0.948"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="0.90"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="249" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46291" g_stop="46344" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="303" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="438" r_length="135" r_score="0.978"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="46653" g_stop="46662" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="448" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E557518" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E557518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44617" e_stop="44687"/>
          <exon e_start="45370" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGAGTAAGTCAGAGCTGTACTGCAACTGTTTCAAAAAGCTTGTCTAGATTATTATATTTTTGGAGTCTAGTGTATCATTTCATCTGTTAATAAGCTATCCTAAAACTGGTACATACATTCTCACGCAAAAATTTGGGTGCAATTAAACATGAAGGCAATTCAAGGTTAATATGCAAACAGTGAGATCTGTATGACTTAGAAGTCCAAGGTTTTTCATTGATCAGAACCCTGTTAATAGGCTATTTGAAATGTCTAAACATGGACAATATCCTCTAAAAACTATTTTAAGAGAAAGAACCATAAGCCGTGATTGGACTGCAATATTAAAACCTTTAGAAGAAATGCCACAAATAAAGTTGATGGAAAAGTTCCTTTGCACGGTCCACTTACTCATTGAATTCTATAGAAAGAAAATCTATGAGTAATAGTAGCACAGTATTAAAGCTTGATCAGTGGGAATTTAGTTTGGTTCATATTTTGAAAAACGTGAAGTCCAAAATAGTACATGGTTTCTTGTTAATTTCTATATCACCTGTTTTTGCATTTCCAAGGAAATTTATTCATGAACTTTGCTTAATCACACAGCAACACCTAAATTGCTGCTGGGCAGAGTTACTTCCCACGTTATTTGATTTGTTTACAGAATGTTCACTCTGACTTTTAAGATCCATCCTCTCCTTAACAGGTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGG-GTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATG</genome_strand>
        <mrna_strand>GCTATCTGCACCAAAATAACATAATTCATCGGGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACAGGGCGTGATGACTGCAGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA....................................................................................ATTCCATATGCGTACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACTCAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACTAGGGAG..................................................................................GTTGGAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390779" ref_strand="+" ref_description="SGN-E390779 [TUS-44-A15](-)">
      <seq>acagctgaaactggaacgtatagatggatggctcctgaggtgattgaacacaaaccgtatgaccccaagggtgatgttttcagctttggtatagtgctgtgggaacttttgactggagaaattccatatgcatacttaacccccttacaagcagcaataggtgtggtgcaacagggtttacggccaacaattcctaagagcactcatccaaagcttgctgaactttttgaaaaatgctggcagcaagacccaacccagagaccagattttttggggattttggatattttgaagcaactaacaaaggaggttggggatgatgggggggacagacccaaggacaaatcaatcgggggcttttttttgttttttagaaagggcaatccctgggaattttttaaaagagagggggttgatcggccttcagcttttgtttcggggtacagattttttgatatccaaacttgatttgattagtttttgaaaatcatggtttttatttaaagtcgcttggcattcatttactattcctaatttagtcaggggggcaagctggggagtaaagctttggcaactttttacagaataactgtgaatttgcgcaagttttaattcctaacccttttttgtacctttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="45127" stop="61920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45427" g_stop="45465" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45466" i_stop="46125" i_length="660">
            <donor d_prob="0.930" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46126" g_stop="46206" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="120" r_length="81" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46207" i_stop="46290" i_length="84">
            <donor d_prob="0.783" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46291" g_stop="46344" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="174" r_length="54" r_score="0.963"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.96"/>
            <acceptor a_prob="0.965" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="309" r_length="135" r_score="0.948"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46653" g_stop="46980" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="637" r_length="328" r_score="0.918"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46981" i_stop="47193" i_length="213">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="47194" g_stop="47218" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="662" r_length="25" r_score="0.720"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="47219" i_stop="47337" i_length="119">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.345" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47338" g_stop="47346" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="663" r_stop="671" r_length="9" r_score="0.444"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="47347" i_stop="47559" i_length="213">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.938" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="47560" g_stop="47575" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="687" r_length="16" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E390779" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390779" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45427" e_stop="45465"/>
          <exon e_start="46126" e_stop="46206"/>
          <exon e_start="46291" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46980"/>
          <exon e_start="47194" e_stop="47218"/>
          <exon e_start="47338" e_stop="47346"/>
          <exon e_start="47560" e_stop="47575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAGGTGCAGAAGATCTGAACTTAATTTTATGCTACAATATCCTCAATCCAATTGAAATTCATGATTTTAAGTTCTTTGATCTTCTTGCTGACAGATATGCATGATTACTCACTAATTTTCCGTTTATCCTCGTGCTTAGATTTTGTTTCCACAATAAAATAACTGCAATAGTTCCCCTCGAGCTGATTTGGGCCTAGTGCTTTGGGATACACCTCAAGCATCTTGTGTGGTTTAAGCACGAGGTGCTTTTAATATGTGTGATTCTCTCTGACTTTTGCAATTTTATCCTTGTACTTGGATTTTGTTTTCACACTCTTAGTGTGGTTGTCACCTTTTCACTTTCATACAGCTGTGAATTGTGTTTCTGTGTTCACCTTGATGCATCTTGGATACTTCATGCACAAGGAGATTTCAATAACCTTCTACCAGAATTACTTGTTAATATGCATTGCATGATTCCTTTACAGTATACCATGGAGATACATTTGATTCTGCAATATTAAGTATAAAAATATGAACCTCTTGGTAAATGGTTTTGACTTATTTTCCTCTTAATACTACAACATTCTCTTACATTATCCCCGTCATTTGTATCCCAGTTTTGTGCTTAAACATCGTGCTGCATGCAAGTGTCGTACTTAAAATGGTTTTTATTTGTTGAAGGTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAAGTAAGTCTCTGCGTGGCATGTATTTGTGTTCACGTGTTAGTTGCTTGACACCTCAACTAATGTTCATGTTCTGTGATGGAGCAGATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTACCTTTCTTATTGAGAATTTTCATCCTCTTTATCTGGTTCTAGCCACCAGATCATTGCTTCGTAAACCAAGATGTCTATAAAATATAACGATCATCACAATGAATGAGCAAACCTCTTTCTGCCCCTTGACTAGCTTTCAATGTGTAGAGATAGACAGATTGATACCTTCTGCAATTGAATTGAAGTGAAATTTGAGGTTCCTAGATCCTAGGCGTATAGTTTAAAAAGAAATAACGATGAAAACATAACTTTTTTGGTACTAAGAGATGGAAAAGAATTAACTGTTAGATCATCTTACAACGTAACCACATGCGCACATAGTGTATAGATGTACTTTAGAAGAACATCATTCATATCTTTCAGATAATCGACATATTCTTCAAAAGCTTACAAAAAGCACACCTATAAGATCTATATATAAATCTAAAAGAAAACACCATATGCTAATGCAACAGTGGAAACAACACGATTTACACTTATTTTAAATTTGTTAGTTGCAATACCAGTTCTAAACAAGAAGCACAAGAATTTAACTTCTATACGTACTTTAACGTTGTAAAATATTTTTTTTTTACACACTATCAGATCACCAAAAAAAAAA</genome_strand>
        <mrna_strand>ACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTGAACACAAACCGTATGACCCCAAGGGTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTTTGACTGGAGAA....................................................................................ATTCCATATGCATACTTAACCCCCTTACAAGCAGCAATAGGTGTGGTGCAACAG...........................................................................................GGTTTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTTTTGAAAAATGCTGGCAGCAAGACCCAACCCAGAGACCAGATTTTTTGGGGATTTTGGATATTTTGAAGCAACTAACAAAGGAG..................................................................................GTTGGGGATGATGGGGGGGACAGACCCAAGGACAAATCAATCGGGGGCTTTTTTTTGTTTTTTAGAAAGGGCAATCCCTGGGAATTTTTTAAAAGAGAGGGGGTTGATCGGCCTTCAGCTTTTGTTTCGGGGTACAGATTTTTTGATATCCAAACTTGATTTGATTAGTTTTTGAAAATCATGGTTTTTATTTAAAGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGGGCAAGCTGGGGAGTAAAGCTTTGGCAACTTTTTACAGAATAACTGTGAATTTGCGCAAGTTTTAATTCCTAACCCTTTTTTGTACCTTTT.....................................................................................................................................................................................................................TTTAAAAAAAAAAAAAAAAAAAAAA.......................................................................................................................AAAAAAAAA.....................................................................................................................................................................................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351981" ref_strand="+" ref_description="SGN-E351981 [cTOS-13-G7]">
      <seq>ttaacaccattacaagcagcaataggtgtggtgcaacagggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaacacagagaccagatttctcggagattttggatattctgaagcaactaacaaaggaggttggagatgatggagaggacagacacaaggacaaatcaatcggtggctttttctcgtctcttagaaagggcaatcactgagaatttactaaaagagaggaggttgatcggccttcagcttttgtctcggtgtacagattctctgatatccaaacttgatctgattagtttttgaaaatcatggtttttatctaatgtcgcttggcattcatttactattcctaatttagtcaggggtgcaagctggtgagtaaagctttggcaactctctacagaataactgtgaatttgcgcaagttctaattcctaacccttttttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="46006" stop="47274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46306" g_stop="46344" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="174" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46653" g_stop="46983" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="505" r_length="331" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E351981" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351981" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46306" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTACCTTTCTTA</genome_strand>
        <mrna_strand>TTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG..................................................................................GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354633" ref_strand="+" ref_description="SGN-E354633 [cTOS-17-D10]">
      <seq>ttaacaccattacaagcagcaataggtgtggtgcaacagggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaacacagagaccagatttctcggagattttggatattctgaagcaactaacaaaggaggttggagatgatggagaggacagacacaaggacaaatcaatcggtggctttttctcgtctcttagaaagggcaatcactgagaatttactaaaagagaggaggttgatcggccttcagcttttgtctcggtgtacagattctctgatatccaaacttgatctgattagtttttgaaaatcatggtttttatctaatgtcgcttggcattcatttactattcctaatttagtcaggggtgcaagctggtgagtaaagctttggcaactctctacagaataactgtgaatttgcgcaagttctaattcctaacccttttttgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="46006" stop="47274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46306" g_stop="46344" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="174" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46653" g_stop="46983" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="505" r_length="331" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E354633" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46306" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTACCTTTCTTA</genome_strand>
        <mrna_strand>TTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG..................................................................................GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377832" ref_strand="+" ref_description="SGN-E377832 [TUS-21-H21](-)">
      <seq>gtggtgcaacagggtttacggccaacaattcctaaaagcactcatccaaagcttgctgaactttttgaaaaatgctggcagcaaaacccaacacaaagaccagatttttcggaaattttggatattttgaagcaactaacaaaggaggttggagatgatggagaggacagacccaaggacaaatcaatcggtggctttttttcgtcttttaaaaagggcaatccctgaaaatttactaaaaaaaaggaggttgatcggccttcagcttttgtttcggtgtacaaattttttgatatccaaacttgatttgattagtttttgaaaatcatggtttttatttaatgtcgcttggcattcatttactattcctaatttagtcaggggtgcaagctggtgagtaaagctttggcaactctttacaaaataactgtgaatttgcgcaagttttaattcctaacccttttttgttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="46131" stop="61920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46333" g_stop="46344" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="147" r_length="135" r_score="0.941"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46653" g_stop="46971" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="466" r_length="319" r_score="0.947"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46972" i_stop="47193" i_length="222">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47194" g_stop="47218" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="491" r_length="25" r_score="0.680"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47219" i_stop="47559" i_length="341">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.938" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47560" g_stop="47575" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="507" r_length="16" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E377832" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46333" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46971"/>
          <exon e_start="47194" e_stop="47218"/>
          <exon e_start="47560" e_stop="47575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTACCTTTCTTATTGAGAATTTTCATCCTCTTTATCTGGTTCTAGCCACCAGATCATTGCTTCGTAAACCAAGATGTCTATAAAATATAACGATCATCACAATGAATGAGCAAACCTCTTTCTGCCCCTTGACTAGCTTTCAATGTGTAGAGATAGACAGATTGATACCTTCTGCAATTGAATTGAAGTGAAATTTGAGGTTCCTAGATCCTAGGCGTATAGTTTAAAAAGAAATAACGATGAAAACATAACTTTTTTGGTACTAAGAGATGGAAAAGAATTAACTGTTAGATCATCTTACAACGTAACCACATGCGCACATAGTGTATAGATGTACTTTAGAAGAACATCATTCATATCTTTCAGATAATCGACATATTCTTCAAAAGCTTACAAAAAGCACACCTATAAGATCTATATATAAATCTAAAAGAAAACACCATATGCTAATGCAACAGTGGAAACAACACGATTTACACTTATTTTAAATTTGTTAGTTGCAATACCAGTTCTAAACAAGAAGCACAAGAATTTAACTTCTATACGTACTTTAACGTTGTAAAATATTTTTTTTTTACACACTATCAGATCACCAAAAAAAAAA</genome_strand>
        <mrna_strand>GTGGTGCAACAG...........................................................................................GGTTTACGGCCAACAATTCCTAAAAGCACTCATCCAAAGCTTGCTGAACTTTTTGAAAAATGCTGGCAGCAAAACCCAACACAAAGACCAGATTTTTCGGAAATTTTGGATATTTTGAAGCAACTAACAAAGGAG..................................................................................GTTGGAGATGATGGAGAGGACAGACCCAAGGACAAATCAATCGGTGGCTTTTTTTCGTCTTTTAAAAAGGGCAATCCCTGAAAATTTACTAAAAAAAAGGAGGTTGATCGGCCTTCAGCTTTTGTTTCGGTGTACAAATTTTTTGATATCCAAACTTGATTTGATTAGTTTTTGAAAATCATGGTTTTTATTTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTTTACAAAATAACTGTGAATTTGCGCAAGTTTTAATTCCTAACCCTTTTTT..............................................................................................................................................................................................................................GTTAAAAAAAAAAAAAAAAAAAAAA.....................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377833" ref_strand="+" ref_description="SGN-E377833 [TUS-21-H21]">
      <seq>tggtgcaacagggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaacacagagaccagatttctcggagattttggatattctgaagcaactaacaaaggaggttggagatgatggagaggacagacacaaggacaaatcaatcggtggctttttctcgtctcttagaaagggcaatcactgagaatttactaaaagagaggaggttgatcggccttcagcttttgtctcggtgtacagattctctgatatccaaacttgatctgattagtttttgaaaatcatggtttttatctaatgtcgcttggcattcatttactattcctaatttagtcaggggtgcaagctggtgagtaaagctttggcaactctctacagaataactgtgaatttgcgcaagttctaattcctaacccttttttgntaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="46131" stop="61920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46334" g_stop="46344" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="146" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46653" g_stop="46971" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="465" r_length="319" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46972" i_stop="47193" i_length="222">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47194" g_stop="47219" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="491" r_length="26" r_score="0.654"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47220" i_stop="47559" i_length="340">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.938" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47560" g_stop="47575" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="507" r_length="16" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E377833" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46334" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46971"/>
          <exon e_start="47194" e_stop="47219"/>
          <exon e_start="47560" e_stop="47575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTACCTTTCTTATTGAGAATTTTCATCCTCTTTATCTGGTTCTAGCCACCAGATCATTGCTTCGTAAACCAAGATGTCTATAAAATATAACGATCATCACAATGAATGAGCAAACCTCTTTCTGCCCCTTGACTAGCTTTCAATGTGTAGAGATAGACAGATTGATACCTTCTGCAATTGAATTGAAGTGAAATTTGAGGTTCCTAGATCCTAGGCGTATAGTTTAAAAAGAAATAACGATGAAAACATAACTTTTTTGGTACTAAGAGATGGAAAAGAATTAACTGTTAGATCATCTTACAACGTAACCACATGCGCACATAGTGTATAGATGTACTTTAGAAGAACATCATTCATATCTTTCAGATAATCGACATATTCTTCAAAAGCTTACAAAAAGCACACCTATAAGATCTATATATAAATCTAAAAGAAAACACCATATGCTAATGCAACAGTGGAAACAACACGATTTACACTTATTTTAAATTTGTTAGTTGCAATACCAGTTCTAAACAAGAAGCACAAGAATTTAACTTCTATACGTACTTTAACGTTGTAAAATATTTTTTTTTTACACACTATCAGATCACCAAAAAAAAAA</genome_strand>
        <mrna_strand>TGGTGCAACAG...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG..................................................................................GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTT..............................................................................................................................................................................................................................GNTAAAAAAAAAAAAAAAAAAAAAAA....................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E233583" ref_strand="+" ref_description="SGN-E233583 [cLED-9-D16]">
      <seq>tggtgcaacagggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaacacagagaccagatttctcggagattttggatattctgaagcaactaacaaaggaggttggagatgatggagaggacagacacaaggacaaatcaatcggtggctttttctcgtctcttagaaagggcaatcactgagaatttactaaaagagaggaggttgatcggccttcagcttttgtctcggtgtacagattctctgatatccaaacttgatctgattagtttttgaaaatcatggtttttatctaatgtcgcttggcattcatttactattcctaatttagtcaggggtgcaagctggtgagtaaagctttggcaactctctacagaataactgtgaatttgcgcaagttctaattcctaaccctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="46131" stop="47269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46334" g_stop="46344" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="146" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46653" g_stop="46969" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="463" r_length="317" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E233583" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46334" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTT</genome_strand>
        <mrna_strand>TGGTGCAACAG...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG..................................................................................GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236515" ref_strand="+" ref_description="SGN-E236515 [cLED-13-E23]">
      <seq>ggtgcaacatggtctacggccaacaattcctaagagcactcatccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaacacagagaccagatttctcggagattttggatattctgaagcaactaacaaaggaggttggagatgatggagaggacagacacaaggacaaatcaatcggtggctttttctcgtctcttagaaagggcgatcactgagaatttactaaaagagaggaggttgatcggccttcagcttttgtctcggtgtacagattctctgatatccaaacttgatctgattaatttttgaaaattatggtttttatctaatgtcgcttggcattcatttactattcctaatatagtcaggggtgcaagctggtgagtaaagctttggcaactctctacagaataactgtgaatttgcgcaagttctaatttctaaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="46131" stop="47266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46335" g_stop="46344" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46345" i_stop="46435" i_length="91">
            <donor d_prob="0.839" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46436" g_stop="46570" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="145" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46653" g_stop="46966" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="459" r_length="314" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E236515" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236515" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46335" e_stop="46344"/>
          <exon e_start="46436" e_stop="46570"/>
          <exon e_start="46653" e_stop="46966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGCAACAGGTAGTATAAAGTCCACTGTCATCATTAGTACTGTTGATATCTTCCCCAGTTAAACCAACACCTCACACATTTGGTTTAACATGGTTATCAGGGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCT</genome_strand>
        <mrna_strand>GGTGCAACAT...........................................................................................GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG..................................................................................GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCGATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAATTTTTGAAAATTATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATATAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTTCTAACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413052" ref_strand="-" ref_description="SGN-E413052 [STM-17-C6]">
      <seq>catccaaagcttgctgaacttcttgaaaaatgctggcagcaagacccaactcagagaccagatttctcggagattttggatattctgaagcaactaactagggaggttggagatgatggagaggacagacacaaagacaaatcaattggtagctttttctcgtctcttagaaagggcaatcactgagaatttactaaaagagatgagggtgatcggccttcagcttttgtctcggtgtacagattctcagatgaccagacttgatctgattagtttttgaaaagcacggtttttatctaatgtcgcttggcattcttttactattcctaatttagtcaggggtgcaagcttgtgagtaaagctttggcaactctgtacagaataactgtgaatttgcgcaagttctaattcctaaccctttggtaccctttcttaaaaaaaaacccatttagaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="46166" stop="47268"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46466" g_stop="46570" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46571" i_stop="46652" i_length="82">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46653" g_stop="46971" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="424" r_length="319" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E413052" ref_strand="-">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413052" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46466" e_stop="46570"/>
          <exon e_start="46653" e_stop="46971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAGGTGGGCATTTTTATTTTATAAGCTTGGTTTTATTTAAGTTTGTTCATTCTTTGAACCTAGGTTTGTATGTTTGTAAAAACAGGTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTT</genome_strand>
        <mrna_strand>CATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACTCAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACTAGGGAG..................................................................................GTTGGAGATGATGGAGAGGACAGACACAAAGACAAATCAATTGGTAGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGATGAGGGTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCAGATGACCAGACTTGATCTGATTAGTTTTTGAAAAGCACGGTTTTTATCTAATGTCGCTTGGCATTCTTTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTTGTGAGTAAAGCTTTGGCAACTCTGTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E721980" ref_strand="+" ref_description="SGN-E721980 [FC15DD09]">
      <seq>aatcggccgaattggtcatcgagttctcaaaaattgaaatggtggcaattattatgcctggtttctactttctgggtgtcgaatgtttacatgtaaaatggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="51868" stop="1568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51565" g_stop="51480" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="99" r_length="86" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51479" i_stop="50578" i_length="902">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="170" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="224" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50168" g_stop="49849" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="544" r_length="320" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="49848" i_stop="49210" i_length="639">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.171" a_score="0.53"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="49209" g_stop="49167" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="587" r_length="43" r_score="0.535"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E721980" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51565" e_stop="51480"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49849"/>
          <exon e_start="49209" e_stop="49167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCATAACTTCTTCCCTCTACCAAAATGGTTGCAATGTTTGCTTTCATAAAGAAATTATAAAGTAAAGAACAAAGCTGTTAACTATCCGTGATTTTTTTCAGGAGCGGCTCAAGCATGTTAGTGGGCTAAAATAAAAATTAAACGGGGTCTTAAATTTGAATCATCAATAACGTTTATATAATTGATTTCTTCTAGTTTTTAATCGATTTATTTTAAATTATTTCTCAGAACTCTAAATATGTCAAATTTCTTCTATAATTCCTTCATTTTTATGAAAAGTTTACTTTTTCTACAAATAATATTTAATATTCGTTAAAAAATAATAACTTATAACCTATTATTATTATTAAAAACGAGGCTCTATAAATTTGAGGGTTTAAAATACTTGTCTATTTTTTTTAATACTGTCAAACGAAAATTGCAGACTTGTACTACTTTTTTTTGTTTTTGTTTTATGTTCTTCGGATTAATTTATAACAAGAAAAACTAACAAGCCAGCTTTATTTTACTTCGTTGCTTTGGATTGAAAACAAAGATAAATAAGTAGACGGTAGGTACATATAGATTAGGTGGTCTAATTGATCAACACACAAGGAAAATTAAATAATCTCATTCTTAAATTAAGGAATCTTAACGAATAACAACCAGATGGAAATGATTAAAAAGAA</genome_strand>
        <mrna_strand>GGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732985" ref_strand="+" ref_description="SGN-E732985 [LB03CF10]">
      <seq>agaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="50868" stop="1573"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50568" g_stop="50507" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="116" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50168" g_stop="49848" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="437" r_length="321" r_score="0.997"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="49847" i_stop="49784" i_length="64">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="49783" g_stop="49761" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="460" r_length="23" r_score="0.652"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E732985" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50568" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49848"/>
          <exon e_start="49783" e_stop="49761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCATAACTTCTTCCCTCTACCAAAATGGTTGCAATGTTTGCTTTCATAAAGAAATTATAAAGTAAAGAACAAAG</genome_strand>
        <mrna_strand>AGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAA................................................................AAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368938" ref_strand="+" ref_description="SGN-E368938 [TUS-25-F9](-)">
      <seq>aacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaattttttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaaaagatcatttatggctgcaactgaactttttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacaaaaagtggacttccgattgagttttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacccccccgtagtcaacatggcgaaatccattcccctttttcccatccaaaattagaaggagcaacctgcaaaattttttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatttgtattgcaaaaaatatgtgtaaatattgttttcctaattttgctataataaataatatttgcctgaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52440" stop="1573"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52141" g_stop="52102" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="151" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="225" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="296" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="350" r_length="54" r_score="0.963"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50168" g_stop="49848" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="671" r_length="321" r_score="0.941"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="49847" i_stop="49784" i_length="64">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="49783" g_stop="49762" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="693" r_length="22" r_score="0.682"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E368938" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52141" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49848"/>
          <exon e_start="49783" e_stop="49762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCATAACTTCTTCCCTCTACCAAAATGGTTGCAATGTTTGCTTTCATAAAGAAATTATAAAGTAAAGAACAAA</genome_strand>
        <mrna_strand>AACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTTTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAAAGATCATTTATGGCTGCAACTGAACTTTTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAAAAAGTGGACTTCCGATTGAGTTTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACCCCCCCGTAGTCAACATGGCGAAATCCATTCCCCTTTTTCCCATCCAAAATTAGAAGGAGCAACCTGCAAAATTTTTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATTTGTATTGCAAAAAATATGTGTAAATATTGTTTTCCTAATTTTGCTATAATAAATAATATTTGCCTGAAAA................................................................AAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296251" ref_strand="+" ref_description="SGN-E296251 [cLET-24-F22]">
      <seq>gggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtggatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgatctcctaattctgctataataaataatatttgcctgaaaggcctctcatctgctcaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52043" stop="49529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51743" g_stop="51692" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="123" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="177" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50168" g_stop="49826" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="520" r_length="343" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E296251" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296251" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51743" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCATAACTT</genome_strand>
        <mrna_strand>GGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTGGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGATCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296216" ref_strand="+" ref_description="SGN-E296216 [cLET-24-G14]">
      <seq>gggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaggcctctcatctgctcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52043" stop="49529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51743" g_stop="51692" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="123" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="177" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50168" g_stop="49833" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="513" r_length="336" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="514" polyA_stop="532"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E296216" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51743" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTC</genome_strand>
        <mrna_strand>GGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E281037" ref_strand="+" ref_description="SGN-E281037 [cLER-7-F24]">
      <seq>gctgttggatttactggggtgactgacattgctggtggatatgctgcgttgacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataattgcacaccagtagtcaacatggcgaaatcaattccctttcttaacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtgttgcaagacatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaggcctctcattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="50468" stop="49535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50351" g_stop="50346" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="0.833"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50168" g_stop="49839" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="336" r_length="330" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E281037" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50351" e_stop="50346"/>
          <exon e_start="50168" e_stop="49839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCAT</genome_strand>
        <mrna_strand>GCTGTT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTTGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAATTGCACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTAACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTGTTGCAAGACATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732442" ref_strand="+" ref_description="SGN-E732442 [LB02AG05]">
      <seq>gctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52037" stop="49549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51737" g_stop="51692" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="117" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="171" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50168" g_stop="49842" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="498" r_length="327" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E732442" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51737" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCT</genome_strand>
        <mrna_strand>GCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727885" ref_strand="+" ref_description="SGN-E727885 [LA16AB10]">
      <seq>gaactcgttccacaggaacaacctatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52701" stop="49549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52408" g_stop="52308" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="203" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="314" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="388" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="459" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="513" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="49848" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="834" r_length="321" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E727885" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52408" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAG</genome_strand>
        <mrna_strand>GAACTCGTTCCACAGGAACAACCTATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E732756" ref_strand="+" ref_description="SGN-E732756 [LB03AB10]">
      <seq>gaacaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52708" stop="49549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52408" g_stop="52308" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="203" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="314" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="388" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="459" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="513" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="49848" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="834" r_length="321" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E732756" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52408" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAG</genome_strand>
        <mrna_strand>GAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E733868" ref_strand="+" ref_description="SGN-E733868 [LB11AF07]">
      <seq>gttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatatttgcctgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52642" stop="49549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52342" g_stop="52308" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="137" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="248" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="322" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="393" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="447" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="49848" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="768" r_length="321" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E733868" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E733868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52342" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAG</genome_strand>
        <mrna_strand>GTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298772" ref_strand="-" ref_description="SGN-E298772 [cLET-44-I5]">
      <seq>gagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacaccccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattgtgccataataaataatattggcctgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="50402" stop="49549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50102" g_stop="49848" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="255" r_length="255" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="256" polyA_stop="269"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E298772" ref_strand="-">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>255</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298772" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="50102" e_stop="49848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAG</genome_strand>
        <mrna_strand>GAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACCCCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTGTGCCATAATAAATAATATTGGCCTGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E714849" ref_strand="+" ref_description="SGN-E714849 [FB12CD12]">
      <seq>attgaacaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaaattagaaggagcaacttgcaaaatctcttgtacagtaatttatagcaggtgatgatgatattcgatgtgggagaatctgtattgcaagaaatatgtgtaaatattgttctcctaattctgctataataaataatattttgcctgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52711" stop="49549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52411" g_stop="52308" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="206" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="317" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="391" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="462" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="516" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="49857" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="828" r_length="312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="835" polyA_stop="844"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E714849" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>828</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52411" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49857"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTT</genome_strand>
        <mrna_strand>ATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719070" ref_strand="+" ref_description="SGN-E719070 [FC06CF09]">
      <seq>aatcggccgaattgatacacttgaaaaaaaccctcctgtcttcacccataaatatcaatctccctttcatttctcaccatcaaacaaaataattgaacaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcaaaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaaaagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52792" stop="49695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52488" g_stop="52308" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="195" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="297" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="408" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="482" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="553" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="607" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="49995" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="781" r_length="174" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E719070" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52488" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACACTTGAAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAA</genome_strand>
        <mrna_strand>ATACACTTGAAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAA...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAAAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291966" ref_strand="+" ref_description="SGN-E291966 [cLET-7-I20]">
      <seq>aacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattccctttcttcacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52704" stop="49699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52404" g_stop="52308" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="199" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="310" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="384" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="455" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="509" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="49999" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="679" r_length="170" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E291966" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52404" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="49999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATC</genome_strand>
        <mrna_strand>AACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368939" ref_strand="+" ref_description="SGN-E368939 [TUS-25-F9]">
      <seq>acaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtcaacatggcgaaatcaattcccttttttaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52706" stop="49703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52406" g_stop="52308" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="201" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="312" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="386" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="457" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="511" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50001" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="678" r_length="167" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E368939" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52406" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACA</genome_strand>
        <mrna_strand>ACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTT-TTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297690" ref_strand="+" ref_description="SGN-E297690 [cLET-28-G9]">
      <seq>tccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcacatataaaaagggtagatttttaaataagtacacaccagtagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52700" stop="49732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52400" g_stop="52308" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="195" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="306" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="380" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="451" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="505" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50032" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="642" r_length="137" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E297690" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52400" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTC</genome_strand>
        <mrna_strand>TCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245119" ref_strand="+" ref_description="SGN-E245119 [cLEF-13-H2]">
      <seq>ttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttgcgattgagtcttgaaggccttttatttactcacatataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52701" stop="49769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52401" g_stop="52308" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="196" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="307" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="381" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="452" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="506" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50069" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="606" r_length="100" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E245119" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52401" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAA</genome_strand>
        <mrna_strand>TTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTGCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247652" ref_strand="+" ref_description="SGN-E247652 [cLEF-42-A23]">
      <seq>tccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52700" stop="49774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52400" g_stop="52308" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52201" i_length="107">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52200" g_stop="52102" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="192" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="303" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="377" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="448" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="502" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50074" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="597" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E247652" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52400" e_stop="52308"/>
          <exon e_start="52200" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACA</genome_strand>
        <mrna_strand>TCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG...........................................................................................................GATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300461" ref_strand="+" ref_description="SGN-E300461 [cLET-45-H19]">
      <seq>taccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactgcggtgactgacattgctggtggatatgctgcgtggacagagagtggacttccgattgagtcttgaaggccttttatttactcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52628" stop="49774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52328" g_stop="52308" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="123" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="234" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="308" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="379" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="433" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50074" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="528" r_length="95" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E300461" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300461" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52328" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACA</genome_strand>
        <mrna_strand>TACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGCGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E294663" ref_strand="+" ref_description="SGN-E294663 [cLET-22-H11]">
      <seq>ttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52665" stop="49820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52365" g_stop="52308" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="160" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="271" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="345" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="416" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="470" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50120" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="519" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E294663" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52365" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAG</genome_strand>
        <mrna_strand>TTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248902" ref_strand="+" ref_description="SGN-E248902 [cLEF-49-D11]">
      <seq>acaacttccacaggaacaaacaatcatgagaactatttcccttgattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaagatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgacattgctggtggatatgctgcgtggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52706" stop="49822"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52406" g_stop="52308" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="201" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="312" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="386" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="457" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="511" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50122" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="558" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E248902" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248902" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52406" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGAC</genome_strand>
        <mrna_strand>ACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTGATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAAGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273823" ref_strand="+" ref_description="SGN-E273823 [cLEN-7-N22]">
      <seq>acaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgtagagttccatggtaccaagaatttggcacaaagcagcaagatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagttcaatgatgggcatgctgctggagccataaacattccttacatgcttacaattggctcatggatgataaagaaccccaatttcttggaggaagtgttggaacaattctggaaggatgatgagattatagttggatgccacttgggtaagagatcatttatggctgcaactgaacttcttgctgctggatttactggggtgactgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52706" stop="50026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52406" g_stop="52308" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52207" i_length="101">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.781" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52206" g_stop="52102" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="204" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="315" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="389" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="460" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="514" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177">
            <donor d_prob="0.927" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50168" g_stop="50148" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="535" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E273823" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52406" e_stop="52308"/>
          <exon e_start="52206" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
          <exon e_start="50168" e_stop="50148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAATCCCAAAGTAATTTCGGCCAAAAATTAAGAGTCTTAGAACGTGTAAAAGATTGAATTGTGATGTAATAAATCGACACATCTCATTAACTGCCTGCTATATATTGTGCAGGGATTTACTGGGGTGACTGAC</genome_strand>
        <mrna_strand>ACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTAGAGTTCCATGGTACCAAGAATTTGGCACAAAG.....................................................................................................CAGCAAGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTTCAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTACAATTGGCTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCTGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCACTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT.................................................................................................................................................................................GGATTTACTGGGGTGACTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E586977" ref_strand="+" ref_description="SGN-E586977 [75814]">
      <seq>taagatcaagtgtagtatctgttcttatcagtttaatatctgatatgtgggtcatcgattcacacgatattaacttaattttttaaggggaagagtccattaaggtagcttgctacctgggctcttgcgcgtcgcccatgcgttgcactactgcttgggcctggcgcaccccaccaaataaaaaaaaaaaaaaaagaaaaaaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="51170" stop="1568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50870" g_stop="50689" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50688" i_stop="50578" i_length="111">
            <donor d_prob="0.984" d_score="0.90"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50577" g_stop="50559" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="201" r_length="19" r_score="0.474"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50558" i_stop="50318" i_length="241">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.60"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50317" g_stop="50278" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="241" r_length="40" r_score="0.600"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E586977" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>241</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E586977" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50870" e_stop="50689"/>
          <exon e_start="50577" e_stop="50559"/>
          <exon e_start="50317" e_stop="50278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCTGTAAGTCCCTTGCATAATACAGCTTTAGAATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAA</genome_strand>
        <mrna_strand>TAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGTCATCGATTCACACGATATTAACTTAATTTTTTAAGGGGAAGAGTCCATTAAGGTAGCTTGCTACCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTACTGCTTGGGCCTGGCGCACCCCACCAAATAAA...............................................................................................................AAAAAAAAAAAAAGAAAAA.................................................................................................................................................................................................................................................AACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E346951" ref_strand="+" ref_description="SGN-E346951 [cTOF-25-C5]">
      <seq>aaaaaaaccctcctgtcttcacccataaatatcaatctccctttcatttctcaccatcaaacaaaataattgaacaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcattatggctgcaactgaacttcttgctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52779" stop="50045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52479" g_stop="52308" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="274" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="385" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="459" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="530" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50346" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="583" r_length="53" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E346951" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52479" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT</genome_strand>
        <mrna_strand>AAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCA-TTATGGCTGCAACTGAACTTCTTGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295587" ref_strand="+" ref_description="SGN-E295587 [cLET-23-H18]">
      <seq>aacaacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52707" stop="50054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52407" g_stop="52308" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="202" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="313" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="387" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="458" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50354" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="504" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E295587" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295587" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52407" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTC</genome_strand>
        <mrna_strand>AACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290277" ref_strand="+" ref_description="SGN-E290277 [cLET-5-B16]">
      <seq>aacttccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgagattatagttggatgccagttgggtaagagatcatttatggctgcaactgaacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52704" stop="50054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52404" g_stop="52308" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="199" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="310" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="384" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50507" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="455" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50399" g_stop="50354" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="501" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E290277" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52404" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50507"/>
          <exon e_start="50399" e_stop="50354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTTGTAAGTCAGCAAAACTAGTAGTATATGATTTTTATTTCAAGCTTCAATTTCATGAGGTAAGGAATTATCAATTTCCTTTCTGCCTTTTTGTTGACTTGGCATTACAGGGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTC</genome_strand>
        <mrna_strand>AACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT...........................................................................................................GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289952" ref_strand="+" ref_description="SGN-E289952 [cLET-9-N1]">
      <seq>aatttggcacaaagcagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttggaggaagtgttggaacaattcgggaaggatgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52508" stop="50216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52321" g_stop="52308" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="14" r_length="14" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52207" i_length="101">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.781" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52206" g_stop="52102" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="119" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="230" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="304" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50516" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="366" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E289952" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>366</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52321" e_stop="52308"/>
          <exon e_start="52206" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAG</genome_strand>
        <mrna_strand>AATTTGGCACAAAG.....................................................................................................CAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E401784" ref_strand="+" ref_description="SGN-E401784 [PPC-5-E16]">
      <seq>gatgagaactatttcccttcattcaacctcattttcacttcttgagttccatggtaccaagaatttggcacacagcaggatcaatggatcggtttcgttaattccaatggcaaggtctcaatttcagcctaaaaaaagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcagaactccactgttcctacttctgttcctgttcgagtcgcactggaattgcttcaagctggccatcgttatttaaatgtcagaactgctgaagagttcagtgatgggcatgctgctggggccataagcattccttacatgattagaattggctcagggatgataaagaaccccaatttcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52681" stop="50250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52382" g_stop="52308" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.429" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="177" r_length="102" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="288" r_length="111" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="362" r_length="74" r_score="0.905"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50550" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="390" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E401784" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52382" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50550"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTGGA</genome_strand>
        <mrna_strand>GATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTCTTGAGTTCCATGGTACCAAGAATTTGGCACACAG........................................................................................................CAGGATCAATGGATCGGTTTCGTTAATTCCAATGGCAAGGTCTCAATTTCAGCCTAAAAAAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCAGAACTCCACTGTTCCTACTTCTGTTCCTGTTCGAGTCGCACTGGAATTGCTTCAAGCTGGCCATCGTTATTTAAATGTCAG...........................................................................................................................................AACTGCTGAAGAGTTCAGTGATGGGCATGCTGCTGGGGCCATAAGCATTCCTTACATGATTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312477" ref_strand="+" ref_description="SGN-E312477 [cLEZ-20-D5]">
      <seq>tttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcacgatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcccaactccacggttcctacttctgttcctgttccagttgcacttgaattgcttcaagctggccatcgttatttagatgtcacaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52671" stop="50252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52371" g_stop="52308" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="166" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="277" r_length="111" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="351" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50552" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="377" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E312477" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52371" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTTG</genome_strand>
        <mrna_strand>TTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CACGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCCCAACTCCACGGTTCCTACTTCTGTTCCTGTTCCAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAC...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296919" ref_strand="+" ref_description="SGN-E296919 [cLET-26-G14]">
      <seq>tatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcacaactccacggttcctacttctgttcctgttcgagttgcacttgaattgcttcaagctggccatcgttatttagatgtcagaactactgaggagtacaatgatgggcatgctgctggagccataaacattccttacatgcttagaattggctcagggatgataaagaaccccaatttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52673" stop="50253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52373" g_stop="52308" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="168" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="279" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51765" g_stop="51692" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="353" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50577" g_stop="50553" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="378" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E296919" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296919" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52373" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51905"/>
          <exon e_start="51765" e_stop="51692"/>
          <exon e_start="50577" e_stop="50553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAGGTTTGATTATTAGTAATTTAATACTACTCCCTTTTTCTGAGTACTCGATGTTAACAATATTTAAGTTTTTCAAATATTTTTTTTACCAGTGTCCTCCTTATGATGCATGATAGATTTTTTTTTAAGTGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAATGTATTTTGTTCATCTTACTTCTCTTTCAATTTTCTTACTTGCTCATAAACGGAGGGTTATTTAATTTTATACACATGACTCTGTTACAATTCTCTGGTACCATTTTTATTTCTTTGAAAATATTTTGGCAACTTAGCAAACATAAATCATACAGAACTAGAGTTTTAGACCAACTTAAAGAACACTGTATTGTTTGGTGGTGTACATAAGAGTGATTTTTGGTTAGTCTTTGAAGATAAGTTTTTCAAGTATCTTTTTTCCTTCTTACGAAAATGATTATTTTTTTTTCGAGTGAATTGCATGTTTGAACACAATTTTAACTTTCAAATAACCCTTTTTTAACTTCAACTTTAGATACTATATTTTCTAGACCAGAATTTGCATGAAATGTGTTCAATTATGAACAAAGAGTACTCTCTGAAGTAGTACTCTGAAGTTTTATTGTTTTTCACGGTGATGTTTTATGCTACTGCATCAAGTTTCTGTTCTTCTTTGAGTGGTATATTAGTTTCCCACATCGGAACCCAAAGCAGGACTCGTACGCAAGTGTTGTGTAATAAAAGCCAAACACTTACTCAGTAATAGGCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGAACCCCAATTTCTT</genome_strand>
        <mrna_strand>TATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAGAACCCCAATTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E612686" ref_strand="+" ref_description="SGN-E612686 [62451]">
      <seq>ggctaagatcaagtgtagtatctgttcttattagtttaatatctgatatgtgggccattggtccacacgatattaactcaattttttaagggggagagtccattaaggtagcttgctacctgggctctcgagcgtcgcccatgcgttgcactactgcacgggcctggcgcaccccaccaaaaaaaacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="51173" stop="50394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50873" g_stop="50689" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50688" i_stop="50578" i_length="111">
            <donor d_prob="0.984" d_score="0.92"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50577" g_stop="50566" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="197" r_length="12" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E612686" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>197</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E612686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50873" e_stop="50689"/>
          <exon e_start="50577" e_stop="50566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAAGTTCAACTTTCTGATTGTGTTTTTCATAGTTTTTCTGTACTTTTTCTACCCTAGATGCATAATCCCAGCAGTAACAGTTTCAAGCGTTTTTGCTCTGTATATGTGGTGCAGGGATGATAAAGA</genome_strand>
        <mrna_strand>GGCTAAGATCAAGTGTAGTATCTGTTCTTATTAGTTTAATATCTGATATGTGGGCCATTGGTCCACACGATATTAACTCAATTTTTTAAGGGGGAGAGTCCATTAAGGTAGCTTGCTACCTGGGCTCTCGAGCGTCGCCCATGCGTTGCACTACTGCACGGGCCTGGCGCACCCCACCAAAAAAA...............................................................................................................ACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614415" ref_strand="+" ref_description="SGN-E614415 [64201]">
      <seq>ggagagaaagtgcagaactccactgttcctacttctgttcctgttcgagtcgcactggaattgcttcaagctggccatcgttatttagatgtcagaactgctgaagagttcagtgatgggcatgctgctggggccataagcattccttacatgattagaattggctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52299" stop="51393"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51999" g_stop="51905" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51765" g_stop="51693" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="168" r_length="73" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E614415" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>168</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51999" e_stop="51905"/>
          <exon e_start="51765" e_stop="51693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAGGTAATGCAATTTATGTAAACAAAAAATATGCCCTTTAAATATTTATACTATTTCTTGCAATATATGATCAGAACAATTTAATTTTTTATCAATCGTTTGTATGGAAGATTCAATATTTTAAACATTTTTTTTTGCGCAGAACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCA</genome_strand>
        <mrna_strand>GGAGAGAAAGTGCAGAACTCCACTGTTCCTACTTCTGTTCCTGTTCGAGTCGCACTGGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG...........................................................................................................................................AACTGCTGAAGAGTTCAGTGATGGGCATGCTGCTGGGGCCATAAGCATTCCTTACATGATTAGAATTGGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274193" ref_strand="+" ref_description="SGN-E274193 [cLEN-8-B22]">
      <seq>tccacaggaacaaacaatcatgagaactatttcccttcattcaacctcattttcacttgttgagttccatggtaccaagaatttggcacaaagcaggatcaatagatcggtttcgttgattccaatggcgaggtctcaatttcagcctaaaataagacgtgacattggtactagcaatagaaatccaagttttagctggatggcaacagttggagagaaagtgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="52700" stop="51685"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52400" g_stop="52308" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.429" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52203" g_stop="52102" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="195" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52015" g_stop="51985" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="226" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E274193" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>226</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274193" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52400" e_stop="52308"/>
          <exon e_start="52203" e_stop="52102"/>
          <exon e_start="52015" e_stop="51985"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAGGTATATTTATATGCATTGAAAATTTTCGATTGAGTTCATTTTTTCTTCTTCTTCCAATGGGTGTTTCTTTTAACTCTGTTTTGTGATTTGAATGCTACTAGCAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAGGTGGGTTTTTGAGTATATCCCCTGTTTTTGTGTTATTTCTCTGTTTTTGGCTTTAAAATGGGTGTTTGAACAAACAATTTTTGTAGCTGGATGGCAACAGTTGGAGAGAAAGTGCAC</genome_strand>
        <mrna_strand>TCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG........................................................................................................CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG......................................................................................CTGGATGGCAACAGTTGGAGAGAAAGTGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E612686" ref_strand="+" ref_description="SGN-E612686 [62451]">
      <seq>ggctaagatcaagtgtagtatctgttcttattagtttaatatctgatatgtgggccattggtccacacgatattaactcaattttttaagggggagagtccattaaggtagcttgctacctgggctctcgagcgtcgcccatgcgttgcactactgcacgggcctggcgcaccccaccaaaaaaaacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="56647" stop="55868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56347" g_stop="56163" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="186" polyA_stop="197"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E612686" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>185</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E612686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56347" e_stop="56163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGTCATTGGCTCACACGATATTAACTCAATTTTTTAAGGGGAAGGGTCTATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTTAA</genome_strand>
        <mrna_strand>GGCTAAGATCAAGTGTAGTATCTGTTCTTATTAGTTTAATATCTGATATGTGGGCCATTGGTCCACACGATATTAACTCAATTTTTTAAGGGGGAGAGTCCATTAAGGTAGCTTGCTACCTGGGCTCTCGAGCGTCGCCCATGCGTTGCACTACTGCACGGGCCTGGCGCACCCCACCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343425" ref_strand="+" ref_description="SGN-E343425 [cTOF-19-F1]">
      <seq>ttcaaaggcttactaaacagtttagcaaaggatgttttgtgtaaaataagccagagcccaaaatttgttccggtccaaatccccgtattcagtaacgagcaacattttctgcacttcaaccaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaactggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57774" stop="61004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58074" g_stop="58368" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="575" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60704" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="721" r_length="146" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E343425" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58074" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAAGGCTTACTAAACAGTTTAGCAAAGGATGTTTTGTGTAAAATAAGCCAGAGCCCAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCT</genome_strand>
        <mrna_strand>TTCAAAGGCTTACTAAACAGTTTAGCAAAGGATGTTTTGTGTAAAATAAGCCAGAGCCCAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412348" ref_strand="+" ref_description="SGN-E412348 [STM-16-K9]">
      <seq>ccaaaatttgttccggtccaaatctatattcagtagcgagcaacattttccgcacctcaattaacgaccaataaccaccgcagagctagtcaaaccaccactactcacggcgggtggtatccaattctgagctgatggccagtatcatcggcgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctcttattcaactcaagagagattcggttcggcgattgttgttgcttcgagtgagctgctcatcaagacaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatacttctgctgatacaggcatttcagcatacaattggtgtgcagcacttggagggattgggtttcttgagacttcttacttgacgttcctcaaactcactaactctgaagcattttgtcctgttggtgatggtgccagctgtggcaacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtggttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaattggtgaagctaatggggcgtttgttttacttggaacaactacttncatggcagctgccagtgcatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57831" stop="61017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58131" g_stop="58368" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="516" r_length="280" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60717" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="675" r_length="159" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E412348" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58131" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACT</genome_strand>
        <mrna_strand>CCAAAATTTGTTCCGGTCCAAAT--CTATATTCAGTAGCGAGCAACATTTTCCGCACCTCAATTAACGACCAATAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTTATTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGTTGCTTCGAGTGAGCTGCTCATCAAGACAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTTCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCACTTGGAGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAACTCACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCAACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTGGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAATTGGTGAAGCTAATGGGGCGTTTGTTTTACTTGGAACAACTACTTNCATGGCAGCTGCCAGTGCATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E470455" ref_strand="+" ref_description="SGN-E470455 [cSTB-18-G2]">
      <seq>ccaaaatttgttccggtccaaatctatattcagtagcgagcaacattttccgcacctcaattaacgaccaataaccaccgcagagctagtcaaaccaccactactcacggcgggtggtatccaattctgagctgatggccagtatcatcggcgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctcttattcaactcaagagagattcggttcggcgattgttgttgcttcgagtgagctgctcatcaagacaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatacttctgctgatacaggcatttcagcatacaattggtgtgcagcacttggagggattgggtttcttgagacttcttacttgacgttcctcaaactcactaactctgaagcattttgtcctgttggtgatggtgccagctgtggcaacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtggttgcaatacttgggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57831" stop="60916"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58131" g_stop="58368" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="516" r_length="280" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60616" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="574" r_length="58" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E470455" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E470455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58131" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60616"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGAT</genome_strand>
        <mrna_strand>CCAAAATTTGTTCCGGTCCAAAT--CTATATTCAGTAGCGAGCAACATTTTCCGCACCTCAATTAACGACCAATAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTTATTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGTTGCTTCGAGTGAGCTGCTCATCAAGACAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTTCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCACTTGGAGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAACTCACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCAACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTGGTTGCAATACTTGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692046" ref_strand="+" ref_description="SGN-E692046 [LH_Ea07L04]">
      <seq>taaaatttgtaccggtccaaatccccgtattcagtaacgagcaacattttctgcacttcaaccaacgaccaacaaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaagacaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagcacttggtgtgattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgaagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagttactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaattggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagctgccagtgcatacttcttgtacatcctaagcacaaagttcactggggaattttgtccgtactgtttagcttctgtcttattgtcatttagtttgttcatcagcagtatgaagggtttgggcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57833" stop="61118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58132" g_stop="58368" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="524" r_length="280" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60815" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="781" r_length="257" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60816" i_stop="60897" i_length="82">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60898" g_stop="60909" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="782" r_stop="793" r_length="12" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E692046" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E692046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58132" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60815"/>
          <exon e_start="60898" e_stop="60909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACG-------ACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAGGTTATCTCTACTACAGACTTGTTTGTTTAGCTTCTATTGCTATATGCAATGGTAGTGACAAAGATATTTCTTTTATATACAGGGTTTGGGCTTT</genome_strand>
        <mrna_strand>TAAAATTTGTACCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGACAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCACTTGGTGTGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGTTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAATTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAG..................................................................................GGTTTGGGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322722" ref_strand="+" ref_description="SGN-E322722 [cTOB-26-D22]">
      <seq>caaaatttgttccggtccaaatccccgtattcagtaacgagcaacattttctgcacttcaaccaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaacagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57832" stop="59026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58132" g_stop="58368" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58726" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="511" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E322722" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58132" e_stop="58368"/>
          <exon e_start="58453" e_stop="58726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTG</genome_strand>
        <mrna_strand>CAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAC....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E286909" ref_strand="+" ref_description="SGN-E286909 [cLES-14-P8]">
      <seq>atttgttccggtccaaatccccgtattcagtaacgagcaacattttctgcacttcaaccaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaactggtgaagctaatgggcgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57836" stop="60969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58136" g_stop="58368" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="513" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60669" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="624" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E286909" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58136" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTT</genome_strand>
        <mrna_strand>ATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E363881" ref_strand="+" ref_description="SGN-E363881 [cLPT-10-P18]">
      <seq>agtaacgagcaacattttctgcacttcataccaactaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacagacatttcagcatacaattggtgtgcagcacttggtgtgattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgaagcattttgtcctgttggtgatggtgccagctgtggagacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtagttgcattacttgggatacaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57864" stop="60922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58164" g_stop="58368" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="486" r_length="280" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60622" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="550" r_length="64" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E363881" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E363881" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58164" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAACGAGCAACATTTTCTGCACTTCA-ACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATT</genome_strand>
        <mrna_strand>AGTAACGAGCAACATTTTCTGCACTTCATACCAACTACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGACATTTCAGCATACAATTGGTGTGCAGCACTTGGTGTGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGAGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTAGTTGCATTACTTGGGATACAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332727" ref_strand="+" ref_description="SGN-E332727 [cTOD-18-C8]">
      <seq>taacgagcaacattttctgcacttcaaccaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtaatatcccgtgctatttttaggaaatctggactttaaaagaactttctgctttaggactatctttgtaaccttctataagtatatatctaaaatttttgtttaaaagaataatatgaagatattaacacatctgtacaagtaaaattggtgggaacctgaagaagtgattggatacaatttctattttagggttttgggcaagtctaaccaattcacgtctctcttttatgactagcctcnnntgttgatctctttatgaantatgtacgtaccagacataataatctttatcccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57866" stop="59331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58166" g_stop="58368" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="59031" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="782" r_length="579" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E332727" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58166" e_stop="58368"/>
          <exon e_start="58453" e_stop="59031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTA</genome_strand>
        <mrna_strand>TAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGGCAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCNNNTGTTGATCTCTTTATGAANTATGTACGTACCAGACATAATAATCTTTATCCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306910" ref_strand="+" ref_description="SGN-E306910 [cLEY-11-K17]">
      <seq>ctcgtgccgacgagcaacattttctgcacttcaaccaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57868" stop="59032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58170" g_stop="58368" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="210" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="490" r_length="280" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E306910" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58170" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG</genome_strand>
        <mrna_strand>GAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265404" ref_strand="+" ref_description="SGN-E265404 [cLEI-9-C14]">
      <seq>caacattttctgcacttcaaccaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgctgttgcttccagtgaactgctcatcaaggcaggtcggagatgcacagacagaatcagaatctaaggtggtattgccagatactcctgctgatacacgcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57873" stop="59025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58173" g_stop="58368" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58725" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="469" r_length="273" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E265404" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58173" e_stop="58368"/>
          <exon e_start="58453" e_stop="58725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCT</genome_strand>
        <mrna_strand>CAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGCTGTTGCTTCCAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCACAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACACGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326407" ref_strand="+" ref_description="SGN-E326407 [cTOC-14-A12]">
      <seq>aacattttctgcacttcaaccaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtaattgcaatacttgggatacaattggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57874" stop="60925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58174" g_stop="58368" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="195" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="475" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60625" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="542" r_length="67" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E326407" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58174" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGG</genome_strand>
        <mrna_strand>AACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAATTGCAATACTTGGGATACAATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E454811" ref_strand="+" ref_description="SGN-E454811 [cSTS-24-O18]">
      <seq>attttccgcacctcaattaacgaccaataaccaccgcagagctagtcaaaccaccactactcacggcgggtggtatccaattctgagctgatggccagtatcatcggcgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctcttattcaactcaagagagattcggttcggcgattgttgttgcttcgagtgagctgctcatcaagacaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatacttctgctgatacaggcatttcagcatacaattggtgtgcagcacttggagggattgggtttcttgagacttcttacttgacgttcctcaaactcactaactctgaagcattttgtcctgttggtgatggtgccagctgtggcaacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtggttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaattggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagctgccagtgcatacttcttgtacatcctaagcacaaaattcactggggaattttgtccatactgtttagcttctgtcctgttgtcatttagtttgttcgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57877" stop="61103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58177" g_stop="58368" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="472" r_length="280" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60803" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="717" r_length="245" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E454811" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E454811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58177" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60803"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATC</genome_strand>
        <mrna_strand>ATTTTCCGCACCTCAATTAACGACCAATAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTTATTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGTTGCTTCGAGTGAGCTGCTCATCAAGACAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTTCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCACTTGGAGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAACTCACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCAACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTGGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAATTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAATTCACTGGGGAATTTTGTCCATACTGTTTAGCTTCTGTCCTGTTGTCATTTAGTTTGTTCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413898" ref_strand="+" ref_description="SGN-E413898 [STM-18-J13]">
      <seq>attttccgcacctcaattaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggcgggtggtatccaattctgagctgatggccagtatcatcggtgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctctcattcaactcaagagagattcggttcggcgattgttgttgcttcgagtgaactgctcatcaagacaggtncggagatgcagagacagaatcagaatctaaagtggtattgccagataccttctgctgatacaggcatttcagcatacaattggtgtgcagcacttggagggattgggtttcttgagacttcttacttgancgtcctcaagttcactaactctgaagcattttgtcctgttggtgatggtgccagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57877" stop="58993"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58177" g_stop="58368" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58693" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="435" r_length="243" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E413898" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413898" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58177" e_stop="58368"/>
          <exon e_start="58453" e_stop="58693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGT-CGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATA-CTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCT</genome_strand>
        <mrna_strand>ATTTTCCGCACCTCAATTAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGTGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTCATTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGTTGCTTCGAGTGAACTGCTCATCAAGACAGGTNCGGAGATGCAGAGACAGAATCAGAATCTAAAGTGGTATTGCCAGATACCTTCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCACTTGGAGGGATTGGGTTTCTTGAGACTTCTTACTTGANCGTCCTCAAGTTCACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472889" ref_strand="+" ref_description="SGN-E472889 [cSTB-30-A10]">
      <seq>attttccgcacctcaattaacgaccaacaaccaccgcagagctagtcaaaccaccactactcacggcgggtggtatccaattctgagctgatggccagtatcatcggtgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctctcattcaacgcaagagagattcggttcggcgattgttgttgcttcgagtgaactgctcatcaagacaggtcggagatgcagagacagaatcagaatctaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57877" stop="58840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58177" g_stop="58368" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58540" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="280" r_length="88" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E472889" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>280</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E472889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58177" e_stop="58368"/>
          <exon e_start="58453" e_stop="58540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGG</genome_strand>
        <mrna_strand>ATTTTCCGCACCTCAATTAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGTGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTCATTCAACGCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGTTGCTTCGAGTGAACTGCTCATCAAGACAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370247" ref_strand="+" ref_description="SGN-E370247 [TUS-28-I22]">
      <seq>caacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaactggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagctgccagtgcatactttttgtacatcctaagcccaaagttaactgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57901" stop="61050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58201" g_stop="58368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="448" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60750" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="640" r_length="192" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E370247" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58201" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60750"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGG</genome_strand>
        <mrna_strand>CAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTTTTGTACATCCTAAGCCCAAAGTTAACTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273256" ref_strand="+" ref_description="SGN-E273256 [cLEM-24-F9]">
      <seq>caacaaccaccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaactggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagctgccagtgcatacttcttgtacatcctaagcacaaagttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57901" stop="61044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58201" g_stop="58368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="448" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60744" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="634" r_length="186" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E273256" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58201" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60744"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCA</genome_strand>
        <mrna_strand>CAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271800" ref_strand="+" ref_description="SGN-E271800 [cLEM-8-A12]">
      <seq>caacaaccaccgcagagctagtcaaaccaccactactcacgggcggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattctgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaactggtgaagctaatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57901" stop="60965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58201" g_stop="58368" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="448" r_length="280" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60665" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="555" r_length="107" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E271800" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58201" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGG</genome_strand>
        <mrna_strand>CAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGGCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTCTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E439644" ref_strand="+" ref_description="SGN-E439644 [cSTA-12-P18]">
      <seq>ccaccgcagagctagtcaaaccaccactactcacggcgggtggtatccaattctgagctgatggccagtatcatcggcgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctctcattcaactcaagagagattcggttcggcgattgttgttgcttcgagtgagctgctcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57907" stop="58800"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58207" g_stop="58368" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58500" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="210" r_length="48" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E439644" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>210</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E439644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58207" e_stop="58368"/>
          <exon e_start="58453" e_stop="58500"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCA</genome_strand>
        <mrna_strand>CCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTCATTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGTTGCTTCGAGTGAGCTGCTCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E366426" ref_strand="+" ref_description="SGN-E366426 [cLPT-1-D24]">
      <seq>caccgcagagctagtcaaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacagacatttcagcatacaattggtgtgcagcacttggtgtgattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgaagcattttgtcctgttggtgatggtgccagctgtggagacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtagttgcattacttgggatacaattgggccagaaaagcaagcctcttggaattggtgaagctaatgggcgtttggttttacttggaacaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57908" stop="60990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58208" g_stop="58368" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="441" r_length="280" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60690" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="573" r_length="132" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E366426" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58208" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTA</genome_strand>
        <mrna_strand>CACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGACATTTCAGCATACAATTGGTGTGCAGCACTTGGTGTGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGAGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTAGTTGCATTACTTGGGATACAATTGGGCCAGAAAAGCAAGCCTCTTGGAATTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E452743" ref_strand="+" ref_description="SGN-E452743 [cSTS-17-H4]">
      <seq>caccgcagagctagtcaaaccaccactactcacggcgggtggtatccaattctgagctgatggccagtatcatcggcgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctcttattcaactcaagagagattcggttcggcgattgttgttgcttcgagtgagctgctcatcaagacaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatacttctgctgatacaggcatttcagcatacaattggtgtgcagcacttggagggattgggtttcttgagacttcttacttgacgttcctcaaactcactaactctgaagcattttgtcctgttggtgatggtgccagctgtggcaacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57908" stop="60898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58208" g_stop="58368" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="441" r_length="280" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60598" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="481" r_length="40" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E452743" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E452743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58208" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGT</genome_strand>
        <mrna_strand>CACCGCAGAGCTAGTCAAACCACCACTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTTATTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGTTGCTTCGAGTGAGCTGCTCATCAAGACAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTTCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCACTTGGAGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAACTCACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCAACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E271756" ref_strand="+" ref_description="SGN-E271756 [cLEM-8-C5]">
      <seq>cgcagagctagtcaaaccaccactacttacggccggtggtatgcaattctgagctgatgggcggtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaactggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagctgccagtgcatacttcttgtacatcctaagcacaaagttcactggggaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57911" stop="61056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58211" g_stop="58368" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="438" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60756" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="636" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E271756" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58211" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTT</genome_strand>
        <mrna_strand>CGCAGAGCTAGTCAAACCACCACTACTTACGGCCGGTGGTATGCAATTCTGAGCTGATGGGCGGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206506" ref_strand="+" ref_description="SGN-E206506 [cLEC-23-L15]">
      <seq>caaaccaccactactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcttttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57923" stop="59025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58223" g_stop="58368" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58725" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="419" r_length="273" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E206506" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58223" e_stop="58368"/>
          <exon e_start="58453" e_stop="58725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCT</genome_strand>
        <mrna_strand>CAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCTTTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359318" ref_strand="+" ref_description="SGN-E359318 [cLHT-31-B17]">
      <seq>actactcacggccggtggtatccaattctgagctgatggccagtatcatcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaagacaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagctactcctgctgatacaggcatttcagcatacaattggtgtgcatcacttggtgtaattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgaagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaattggtgaagctaatgggcgtttggttttacttggaacaactacatccatggcaactgccagtgcatacttcttgtacatcctaagcacaaagttcactgggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57932" stop="61051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58232" g_stop="58368" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="417" r_length="280" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60751" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="610" r_length="193" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E359318" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58232" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGA</genome_strand>
        <mrna_strand>ACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGACAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGCTACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCATCACTTGGTGTAATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAATTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACATCCATGGCAACTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E623633" ref_strand="+" ref_description="SGN-E623633 [88727]">
      <seq>ctactcacggcgggtggtatccaattctgagctgatggccagtatcatcggcgtagcatcttctccttttcccacccagacctctcatctccttccatctcgctctaattccatatcttctctcattcaactcaagagagattcggttcggcgattgttggtgcttcgagtgagctgctcatcaagacagggtcggagatgcagagacagaatcagaatctaaagggtggtattgccagatacttctgctgatacaggcatttcagcatacaattggtgtgcagcacttggagggattgggtttcttgagacttcttacttgacgttcctcaagttcactaactctgaagcattttgtcctgttggtgatggtgccagctgtggcaacatcctcaacagcagctactcagctgtatttggtgttcctcttccattgattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaattggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagctgccagtgcatacttcttgtacatcctaagcacaaaattcactggggaattttgtccatactgtttagcttctgtcctgttgtcatttagtttgttcgtcagcagtataaagggttggggtttgaagaggtgcaaaagatgtgggtatacagttacttatagttctcttggtggttttctaacctaaacaatttcatacagtgactctcagnctacaaacaccaggttctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57933" stop="61312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58233" g_stop="58368" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="419" r_length="283" r_score="0.943"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60815" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="676" r_length="257" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60816" i_stop="60897" i_length="82">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.990" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60898" g_stop="61010" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="677" r_stop="789" r_length="113" r_score="0.894"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E623633" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E623633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58233" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60815"/>
          <exon e_start="60898" e_stop="61010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCA-GGTCGGAGATGCAGAGACAGAATCAGAATCT-AA-GGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAGGTTATCTCTACTACAGACTTGTTTGTTTAGCTTCTATTGCTATATGCAATGGTAGTGACAAAGATATTTCTTTTATATACAGGGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGG-TTTCTACCCTAAACAA-TTCATACAGTGACTCTCAGCCTACAAACACAGG</genome_strand>
        <mrna_strand>CTACTCACGGCGGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTAGCATCTTCTCCTTTTCCCACCCAGACCTCTCATCTCCTTCCATCTCGCTCTAATTCCATATCTTCTCTCATTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGATTGTTGGTGCTTCGAGTGAGCTGCTCATCAAGACAGGGTCGGAGATGCAGAGACAGAATCAGAATCTAAAGGGTGGTATTGCCAGATACTTCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCACTTGGAGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTCACTAACTCTGAAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCAACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTGATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAATTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAATTCACTGGGGAATTTTGTCCATACTGTTTAGCTTCTGTCCTGTTGTCATTTAGTTTGTTCGTCAGCAGTATAAAG..................................................................................GG-TTGGGGTTTGAAGAGGTGC-AAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTTCTAACCTAAACAATTTCATACAGTGACTCTCAGNCTACAAACACCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301229" ref_strand="+" ref_description="SGN-E301229 [cLEW-24-E21]">
      <seq>atcggcgtatcatcttctccttttccaacccagacctctcatcttcttccatctcgctctaattccatatcttctctcgttcaactcaagagagattcggttcggcgactgttgttgcttcgagtgaactgctcatcaaggcaggtcggagatgcagagacagaatcagaatctaaggtggtattgccagatactcctgctgatacaggcatttcagcatacaattggtgtgcagctcttggtgggattgggtttcttgagacttcttacttgacgttcctcaagttaactaactctgcagcattttgtcctgttggtgatggtgccagctgtggcgacatcctcaacagcagctactcagctgtatgtggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="57979" stop="60919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58279" g_stop="58368" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58453" g_stop="58732" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="370" r_length="280" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60559" g_stop="60619" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="431" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E301229" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58279" e_stop="58368"/>
          <exon e_start="58453" e_stop="58732"/>
          <exon e_start="60559" e_stop="60619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAGGTACAGTTACTCTTCATCTCTTCAAGATTCACTTTTTTTTTCTTCTTCTCTAATGTTGACATTTTTATTGCTTGATTCTTAAAGAGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACA</genome_strand>
        <mrna_strand>ATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG....................................................................................AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241064" ref_strand="+" ref_description="SGN-E241064 [cLED-26-K17]">
      <seq>tggtgccagctgtggcgacatcctcaacagcagctactcagctgtatttggtgttcctcttccattaattggtatggttgcttatggagtagttgcaatacttgggatacaattgggccagaaaagcaggcctcttggaactggtgaagctaatgggcgtttggttttacttggaacaactacttccatggcagctgccagtgcatacttcttgtacatcctaagcacaaagttcactggggaattttgtccgtactgtttagcttctgtcttattgtcatttagtttgttcatcagcagtatgaagggtttgggctttcaagaggtgcaaaaagatgtgggtatacagttacttatagttctcttggtggtttctaccctaaacaattcatacagtgactctcagcctacaaacacaggttctgctctggctgagatggaatactttacagcagagatcacatcagagtctacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="58383" stop="61757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58683" g_stop="58732" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60559" g_stop="60815" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="307" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60816" i_stop="60897" i_length="82">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60898" g_stop="61010" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="420" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61011" i_stop="61401" i_length="391">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61402" g_stop="61457" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="476" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E241064" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58683" e_stop="58732"/>
          <exon e_start="60559" e_stop="60815"/>
          <exon e_start="60898" e_stop="61010"/>
          <exon e_start="61402" e_stop="61457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTATTACCTCAATTTAGTGTCTTATTTTGACTAAGAAGTTGAAGAAGCCCTTTTTAAGATTTTAGTAAAGAACACATAATTCTACCTTCTTGAGGTAGGAGAAAGATCTGATGTACATGGTACGCCACCCTCCCCAGACCGCACTTGGGATTACATTAGGTAATGTTGTTGTATAGAAGACCATGTAATGCAATAGGATTGCTTTATTTGTTTGTAAGAAAATATTGTTTGGAAGAATAAATAGAGGAATACATCTATTTATGTAGTATAATATCTCTGAAAACATATCCTTTGTAATGAAACATACAAAGATGACAATGGTAAAGCTTCTAATTTTAAATGGTGATAGTAAATTTGTTGTATTGCAAGTAATTGTAGTAAATTAATTAGTTCTATATGGGTTGTCAAGCTAGCGTAACCTTCCTCCTTTATCCGGGCCTGCAATTAGCTATAGAGCAAGCTCGCACAATCAGAGTTTCCCCGGGGATAACCCCATCCCAGTACTACTCCAGCCAAAGCATGTTAACTTTGCAGTTCATATAGCTGACCCAACTAACTAGGAAAACATAGATGTTGTTATTGTTGTACATGGAGAGAGTAAGTTATGCTTGTTTAAAACATTAATTTAGGACATAATATGAAGTTGGTTTCAAGAAACCTTACTAAACACAAGATGTTATTAGCTGAAGAAATCTATTGTTAATTAGACCAGCATATGTTTGATAATAGCCTTTTTTTAAGTTACATGATCTTCGGTTGTCTTCAAATGAGACTCTGTAAGGTAGATAGTTTGAATTATCAATGAATGGGATGCCTAGAAATGCAATCGGACTGAGAAACCTGTGCTGTACCCAATTCGCCTCCATAAGGTCACCGTCATTTCCACCCACTCCAATTCCAGTACTCATTGATGAATCAAAGGACTTTTCCCTATCTCAGTGTTACAATAAGCCGGCACACATTGATTGCAGTGAGGTTACAAAACTCCAGTGTGGAGCCAGAATTAGAAAAACCAATATCAATTGGTCCAACATACTTGACAAGAAGATGTTGACAGTAAACATTGCTGTAAGTTGCACCCATTTTATCTCATAGTGGTGAGGCCTCAACATAAACCAATTCCTGGAAGTAGCAACACCTAATCCTCGTACTGATTGGGCTCTAATTGCTCGTAAATCTCTCATATACTTTATGTGCATAGTGTGCATAACACACAGGTGAATTGTTCGACCTTTATCGTGTCAAAAAAAAAAACACTGGGGTGATTTGTTCTTCTAACAAAATGTTATAACTCCTTTTGATGGTAATCATACATATCACAGAGGAGGTAGCACATTATAATATATAGTAGTGTATTTTGTTGTCAGACTTAATAACTAATGCAGTGCTAATTTTGTTACATTGTAAGCTGTATTGTTTGATCTGAAAGACACAGATTGGAAAATCATTAAATTGAAGGCAGTATGTCACTTAAATTGCAGGTAATATGTTTGGAAAAAGATTCAGTTTTCATCCTTTTTCATTTGCCAGGTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAGGTTATCTCTACTACAGACTTGTTTGTTTAGCTTCTATTGCTATATGCAATGGTAGTGACAAAGATATTTCTTTTATATACAGGGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGGGTAAACAATCCGTACACATTTACACATTGTAGGATGATATTAGGCAAAGTGTCTTTGGATTGAAAGGACAATAGGCAAGAGTTTCTTTTTTTGCATTAAGTAGTGAATGTTTGATTGGCATTGATTAAAGAGATAATCACATTAACTTGTATAAAAACTTTCCATGAATTATTTAAGCTAGAATCTTAAAGCAAGTAAGAGAAGCTTGTTTCAGTTTCTAGATTTAGCAGCAACAAGATATCTTGGTCATTTTAAGATAGAAAAGCTCTTGATGTGCAGTCATTTAGTCACAGGTAAAACTCTAGATCATCTGAAATGTATAGTTGGTGAAAAGATCATGCACGTTATTCAAGAGAACAATTACTCAAAATCCTTTTCCCATCTTTTGCAGTTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACAC</genome_strand>
        <mrna_strand>TGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAG..................................................................................GGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGG.......................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E695886" ref_strand="+" ref_description="SGN-E695886 [LH_Ea07L04](-)">
      <seq>gggaattttgtccgtactgtttagcttctgtcttattgtcatttagtttgttcatcagcagtatgaagggtttgggctttcaagaggtgcaaaaagatgtgggtatacagttacttatagttctcttggtggtttctaccctaaacaattcatacagtgactctcagcctacaaacacaggttttgctttggctgagatggaatactttacaacagagatcacatcagagtttaccccttttgctatatccctagcgaaacccctgcattcaattggggcaaaaatgtatggggctttctggtgttttcactgccaggaacaaaagcagatgtttggacgagaagcagccaagttactagactatgtagaatgctttccttatggacttaagaggggaatttttatgatcaatgcatgtcaagaagcaaaactcgaagggttccctacgtgggttatcaatggggaggtttttagcggagagaagaagctttcagagctggctgcactgtctggtttcgatatgaaagaagaacttacggaggctaaatgagctctgttgatcaccagtcacatattcttaggatatttaagtttatgaatttttataactgccctttggtatttacttagtttcataatgtaattcccttcttatgttagtgaaactgaataggtagtatgataaagtgaaggatccgagtggatcatctttagggtatatatatcaagcaaaccctattccccccaatttatggggaatgttttcttctaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="60448" stop="63107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60748" g_stop="60815" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60816" i_stop="60897" i_length="82">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60898" g_stop="61010" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="181" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61011" i_stop="61401" i_length="391">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61402" g_stop="61549" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="329" r_length="148" r_score="0.953"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.720" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="467" r_length="138" r_score="0.978"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.874" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62519" g_stop="62801" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="750" r_length="283" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="772" polyA_stop="792"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E695886" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E695886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60748" e_stop="60815"/>
          <exon e_start="60898" e_stop="61010"/>
          <exon e_start="61402" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62801"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAGGTTATCTCTACTACAGACTTGTTTGTTTAGCTTCTATTGCTATATGCAATGGTAGTGACAAAGATATTTCTTTTATATACAGGGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGGGTAAACAATCCGTACACATTTACACATTGTAGGATGATATTAGGCAAAGTGTCTTTGGATTGAAAGGACAATAGGCAAGAGTTTCTTTTTTTGCATTAAGTAGTGAATGTTTGATTGGCATTGATTAAAGAGATAATCACATTAACTTGTATAAAAACTTTCCATGAATTATTTAAGCTAGAATCTTAAAGCAAGTAAGAGAAGCTTGTTTCAGTTTCTAGATTTAGCAGCAACAAGATATCTTGGTCATTTTAAGATAGAAAAGCTCTTGATGTGCAGTCATTTAGTCACAGGTAAAACTCTAGATCATCTGAAATGTATAGTTGGTGAAAAGATCATGCACGTTATTCAAGAGAACAATTACTCAAAATCCTTTTCCCATCTTTTGCAGTTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCCACAAT</genome_strand>
        <mrna_strand>GGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAG..................................................................................GGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGG.......................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCTTTGGCTGAGATGGAATACTTTACAACAGAGATCACATCAGAGTTTACCCCTTTTGCTATATCCCTAGCGAAACCCCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTTTCACTGCCAGGAACAAAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCAGCCAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTTTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACGTGGGTTATCAATGGGGAG..................................................................................................................................GTTTTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACGGAGGCTAAATGAGCTCTGTTGATCACCAGTCACATATTCTTAGGATATTTAAGTTTATGAATTTTTATAACTGCCCTTTGGTATTTACTTAGTTTCATAATGTAATTCCCTTCTTATGTTAGTGAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTTAGGGTATATATATCAAGCAAACCCTATTCCCCCCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289753" ref_strand="+" ref_description="SGN-E289753 [cLET-4-H4]">
      <seq>ctgtcttattgtcatttagtttgttcatcagcagtatgaagggtttgggctttcaagaggtgcaaaaagatgtgggtatacagttacttatagttctcttggtggtttctaccctaaacaattcatacagtgactctcaggctacaaacacaggttctgctctggctgagatggaatactttacagcagagatcacatcagagtctacaccttttgctatatccctagcgaaacacctgcattcaattggggcaaaaatgtatggggctttctggtgttctcactgccaggaacaaaagcagatgtttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="60475" stop="61854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60775" g_stop="60815" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60816" i_stop="60897" i_length="82">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60898" g_stop="61010" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="154" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61011" i_stop="61401" i_length="391">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61402" g_stop="61545" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="298" r_length="144" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E289753" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>298</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60775" e_stop="60815"/>
          <exon e_start="60898" e_stop="61010"/>
          <exon e_start="61402" e_stop="61545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAGGTTATCTCTACTACAGACTTGTTTGTTTAGCTTCTATTGCTATATGCAATGGTAGTGACAAAGATATTTCTTTTATATACAGGGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGGGTAAACAATCCGTACACATTTACACATTGTAGGATGATATTAGGCAAAGTGTCTTTGGATTGAAAGGACAATAGGCAAGAGTTTCTTTTTTTGCATTAAGTAGTGAATGTTTGATTGGCATTGATTAAAGAGATAATCACATTAACTTGTATAAAAACTTTCCATGAATTATTTAAGCTAGAATCTTAAAGCAAGTAAGAGAAGCTTGTTTCAGTTTCTAGATTTAGCAGCAACAAGATATCTTGGTCATTTTAAGATAGAAAAGCTCTTGATGTGCAGTCATTTAGTCACAGGTAAAACTCTAGATCATCTGAAATGTATAGTTGGTGAAAAGATCATGCACGTTATTCAAGAGAACAATTACTCAAAATCCTTTTCCCATCTTTTGCAGTTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAA</genome_strand>
        <mrna_strand>CTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAG..................................................................................GGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGGCTACAAACACAGG.......................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339326" ref_strand="+" ref_description="SGN-E339326 [cTOF-4-J2]">
      <seq>tttcaagaggtgcaaaaagatgtgggtatacagttacttatagttctcttggtggtttctaccctaaacaattcatacagtgactctcagcctacaaacacaggttctgctctggctgagatggaatactttacagcagagatcacatcagagtctacaccttttgctatatccctagcgaaacacctgcattcaattggggcaaaaatgtatggggctttctggtgttctcactgccaggaacataagcagatgtttggacgagaagctgcggagttactagactatgtagaatgctttccttatggacttaagaggggaatatctgtgatcagtgcntgtcaagaagcacaactcggagggttccctacgtgggttatcaatggggaggttcttagcggagagaagaagctttcagagctggctgcactgtctggtttccgtttgcctgatcgacttactgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="60607" stop="62875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60907" g_stop="61010" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61011" i_stop="61401" i_length="391">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61402" g_stop="61549" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="252" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.720" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="390" r_length="138" r_score="0.928"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="0.94"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62519" g_stop="62593" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="465" r_length="75" r_score="0.880"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E339326" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60907" e_stop="61010"/>
          <exon e_start="61402" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGGGTAAACAATCCGTACACATTTACACATTGTAGGATGATATTAGGCAAAGTGTCTTTGGATTGAAAGGACAATAGGCAAGAGTTTCTTTTTTTGCATTAAGTAGTGAATGTTTGATTGGCATTGATTAAAGAGATAATCACATTAACTTGTATAAAAACTTTCCATGAATTATTTAAGCTAGAATCTTAAAGCAAGTAAGAGAAGCTTGTTTCAGTTTCTAGATTTAGCAGCAACAAGATATCTTGGTCATTTTAAGATAGAAAAGCTCTTGATGTGCAGTCATTTAGTCACAGGTAAAACTCTAGATCATCTGAAATGTATAGTTGGTGAAAAGATCATGCACGTTATTCAAGAGAACAATTACTCAAAATCCTTTTCCCATCTTTTGCAGTTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAG</genome_strand>
        <mrna_strand>TTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGG.......................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACATAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCTGCGGAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATATCTGTGATCAGTGCNTGTCAAGAAGCACAACTCGGAGGGTTCCCTACGTGGGTTATCAATGGGGAG..................................................................................................................................GTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCCGTTTGCCTGATCGACTTACTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370246" ref_strand="+" ref_description="SGN-E370246 [TUS-28-I22](-)">
      <seq>ccctaaacaattcatacagtgactctcagcctacaaacacaggttctgctctggctgagatggaatactttacagcagagatcacatcagagtctacaccttttgctatatccctagcgaaacacctgcattcaattggggcaaaaatgtatggggctttttggtgttctcactgccaggaacaaaagcagatgtttggacgagaagcagcaaagttactagactatgtagaatgctttccttatggacttaagaggggaatttctatgatcaatgcatgtcaagaagcaaaactcgaagggttccctacatgggttatcaatggggaggtttttagcggaaagaagaagctttcagagctggctgcactgtctggtttcgatatgaaagaagaacttactgaggctaaatgagctctgttgatcaacagtcacatactcttaggatatttaagtttatgaattcttataactgccctctggtatttacttagtttcataatgtaattaccttcttatgttagtaaaactgaataggtagtatgataaagtgaaggatccgagtggatcatcttttgagtaaatatatcaagcaaatcctattaccccaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="60668" stop="63100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60968" g_stop="61010" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61011" i_stop="61401" i_length="391">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61402" g_stop="61549" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="191" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="329" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62519" g_stop="62796" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="607" r_length="278" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="609" polyA_stop="634"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E370246" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60968" e_stop="61010"/>
          <exon e_start="61402" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGGGTAAACAATCCGTACACATTTACACATTGTAGGATGATATTAGGCAAAGTGTCTTTGGATTGAAAGGACAATAGGCAAGAGTTTCTTTTTTTGCATTAAGTAGTGAATGTTTGATTGGCATTGATTAAAGAGATAATCACATTAACTTGTATAAAAACTTTCCATGAATTATTTAAGCTAGAATCTTAAAGCAAGTAAGAGAAGCTTGTTTCAGTTTCTAGATTTAGCAGCAACAAGATATCTTGGTCATTTTAAGATAGAAAAGCTCTTGATGTGCAGTCATTTAGTCACAGGTAAAACTCTAGATCATCTGAAATGTATAGTTGGTGAAAAGATCATGCACGTTATTCAAGAGAACAATTACTCAAAATCCTTTTCCCATCTTTTGCAGTTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCC</genome_strand>
        <mrna_strand>CCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGG.......................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTTTGGTGTTCTCACTGCCAGGAACAAAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG..................................................................................................................................GTTTTTAGCGGAAAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATTTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTTTGAGTAAATATATCAAGCAAATCCTATTACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E293665" ref_strand="+" ref_description="SGN-E293665 [cLET-21-I3]">
      <seq>tctggctgagatggaatactttacagcagatatcacatcagagtctacaccttttgctatatccctagcgaaacacctgcattcaattggggcaaaaatgtatggggctttctggtgttctcactgccaggaacaaaagcagatgtttggacgagaagcagcaaagttactagactatgtagaatgctttccttatggacttaagaggggaatttctatgatcaatgcatgtcaagaagcaaaactcgaagggttccctacatgggttatcaatggggaggttcttagcggagagaagaagctttcagagctggctgcactgtctggtttcgatatgaaagaagaacttactgaggctaaatgagctctgttgatcaacagtcacatactcttaggatatctaagtttatgaattcttataactgccctctggtatttacttagtttcataatgtaattaccttcttatgttagtaaaactgaataggtagtatgataaagtgaaggatccgagtggatcatcttctgagtaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="61108" stop="63080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61408" g_stop="61549" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="280" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62519" g_stop="62767" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="529" r_length="249" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="532" polyA_stop="544"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E293665" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61408" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGA</genome_strand>
        <mrna_strand>TCTGGCTGAGATGGAATACTTTACAGCAGATATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG..................................................................................................................................GTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E412349" ref_strand="-" ref_description="SGN-E412349 [STM-16-K9]">
      <seq>ttttgctatatccctagcgaaacacctgcgttcaattggggcaaaaatgtatggggctttctggtgttctcactgccaggaacaaaagcagatgtttggacgagaagcagcaaagttactagactatgtagaatgctttccttatggacttaagaagggaacttacatgatcgatgcatgtcaagaagcaaaactcgaagggttccctacatgggtgatcaatggggaggttcttagcggagagaagaagctttcggagctggctgcactgtctggtttcgatatgaaagaagaacttactgaggctaaatgagcactgttgaccaacagtcacatattcctaggatatcgaagtttatgaatttttataactgccctctggtatttacttagtttcataatgtaattatcttcttatgttagtaaaactgaatagatagtatgataaagtgaaggatccgagtggatcgtcttctgagtatatatatcaagcaaatcctattacccacaattattgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="61159" stop="63107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61459" g_stop="61549" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="229" r_length="138" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.874" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62519" g_stop="62801" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="512" r_length="283" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="518" polyA_stop="527"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E412349" ref_strand="-">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412349" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="61459" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62801"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCCACAAT</genome_strand>
        <mrna_strand>TTTTGCTATATCCCTAGCGAAACACCTGCGTTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAAGGGAACTTACATGATCGATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTGATCAATGGGGAG..................................................................................................................................GTTCTTAGCGGAGAGAAGAAGCTTTCGGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCACTGTTGACCAACAGTCACATATTCCTAGGATATCGAAGTTTATGAATTTTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTATCTTCTTATGTTAGTAAAACTGAATAGATAGTATGATAAAGTGAAGGATCCGAGTGGATCGTCTTCTGAGTATATATATCAAGCAAATCCTATTACCCACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E292526" ref_strand="-" ref_description="SGN-E292526 [cLET-16-N6]">
      <seq>ttgctatatccctagcgaaacacctgcattcaattggggcaaaaatgtatggggctttctggtgttctcactgccaggaacaaaagcagatgtttggacgagaagcagcaaagttactagactatgtagaatgctttccttatggacttaagaggggaatttctatgatcaatgcatgtcaagaagcaaaactcgaagggttccctacatgggttatcaatggggaggttcttagcggagagaaaaagctttcagagctggctgcactgtctggtttcgatatgaaagaagaacttactgaggctaaatgagctttgttgatcaacagtcacatactcttaggatatctaagtttatgaattcttataactgccctctggtatttacttagtttcataatgtaattaccttcttatgttagtaaaactgaataggtagtatgataaagtgaaggatccgagtggatcatcttctgagtaaatatatcaagccaatcctattaccccaaaaaacaaaaaaaaaaaacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="61161" stop="88239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61461" g_stop="61549" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="227" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62519" g_stop="62799" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="508" r_length="281" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62800" i_stop="63761" i_length="962">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63762" g_stop="63782" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="529" r_length="21" r_score="0.810"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E292526" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292526" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="61461" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62799"/>
          <exon e_start="63762" e_stop="63782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCCACAATGTTTTGTTCTAAAGTTGTACATGTCCAATTTCCCCCTGAAAGTCTATTTCTCTTATTTTTATCCTATGCCAAACTTTGGCGATAACTTTTTCCCTAATCTGAACCCATTGTGAGGACAATCTAATGGCAAGTGTAATCTGAAGATGAAAAAGTATCTCATGATTATTCTTTTTGTATGTAAGAGTGATTGTATCCCATAATGTGAATGATCAACTCTTGAAATGAATTTCCCTGGTTAATTTCCTATTTACAAATGTTTTCTAAAGTGAAGACGACACAGATTGAAGGAGTAGAGATGTATGTCGAATGTGATATGAGTAAGCAAATCGTACCCAACAACCTTATGGGATAGAGATGTTGTTTTTGGTAGCTATTAGGACCTTGGATGGCATTTGTAGTTTTTTAAAATATGGGTAGCTGGTGACCGTTTTTTGAAACCTTGGATGAAATTTACTCTAGGAGTCAATTTCAAAGAGTACATGGTGACTTCTGAAAATATTCAACACTTCTTCATCTTAGTGTACAATGTATATTATTAGCTAAAATCTATTTTATATTAAGGAGGAACTGACTTGGAATTTTTTCTCTAAACTTATCAATACTAATATTCATTATTTTGTGATCAAGAACATCAATTGAAATACTTAACTTCTTTTAAAAAATACAAATCATTTCTTATTTTGAAATTTTAATAATCGTGTCAAAGCAAAAATAGAGCGCTTAATTGAATGGTGAGTTTAATATTGTAGTTAAATATTTAATAAAAGTTTACTTTTGAACATGAAAACCCCAAATTCAATACTAGATTGATTTAGTTCAAAATTAACTTTGCTTTATTTAAAAAAGGGTCCATGTTTGACTCTATTCAAGATCCAAACTCTGAATTTTTTATATTTAGTGAAATTTAATTCTTGAAATAATTGAAACAGAATTGTGGAAAGTCATAATGTTTTGTTTTTTAAAAGAAAAAATAAATAAAAA</genome_strand>
        <mrna_strand>TTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG..................................................................................................................................GTTCTTAGCGGAGAGAAAAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTTTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCCAATCCTATTACCCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAAAAAAAAAAAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298314" ref_strand="+" ref_description="SGN-E298314 [cLET-41-A14]">
      <seq>ctcactgccaggaacaaaagcagatgtttggacgagaagcagcaaagttactagactatgtagaatgctttccttatggacttaagaggggaatttctatgatcaatgcatgtcaagaagcaaaactcgaagggttccctacatgggttatcaatggggaggttcttagcggagagaagaagctttcagagctggctgcactgtctggtttcgatatgaaagaagaacttactgaggctaaatgagctctgttgatcaacagtcacatactcttaggatatctaagtttatgaattcttataactgccctctggtatttacttagtttcataatgtaattaccttcttatgttagtaaaactgaataggtagtatgataaagtgaaggatccgagtggatcatcttctgagtaaatatatcaagcaaatcctattacccaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="61227" stop="63099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61527" g_stop="61549" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62251" g_stop="62388" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="161" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62519" g_stop="62799" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="442" r_length="281" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E298314" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61527" e_stop="61549"/>
          <exon e_start="62251" e_stop="62388"/>
          <exon e_start="62519" e_stop="62799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCACTGCCAGGAACAAAAGCAGGTTCTCTTTCTTTTGCAAATGTGCTTTCTTAGTACTGCATTTTGATGGGTTTCTCAAAAAAAAAAAAAAAACTGCATATGAAAATGATGTTTTTTCTAAAATTATTTCCTTTTTGGTTGCCTCAATGGCATAGTGACATCATTTCATTAGGCAAAAAAAAAGATTCAGAGAAAGAAATACTTGCATACATAGAAAATGGGAAAGTAAAATCTTTCCCCATTATCAAATCTGACATGATGTAGGTAGGGTGAAGCGTGGATGTTGATTGGACTCCAGCCACGTTGTCTGATTGCTACATTCCTAAAGTAACATTCTATAAGGGAAAAGACAAAACATGATATGGGTAGGGAAGAATATGAATATGCATCAACTACTATTGGGTTGAATATTAACGTCTTCCGTAAAATAAGTAAGAGCATCATTAAAGGGAAAAAGAGAGACCCTTATATTTCCTTCTTTCGTATACTGGTGCTGGAATTTGGCTAAGAGCTTCTGTGGATTAATCTTTAAAGGTCAGAAGCAGATACTCAGAGTTCTGACCCCAACTGTTTGTCAATATTGCAACTAAACATTAAGAATATAAAAAATGGCCTTAAAGATCCCACTAGAAATTCTGATTTGCATTATGCACTTAGCAGTATAGGTAAGAGTTGGCTTGTATTCTGTACTAAATTGGTATATTCTTGTGTCACTGCAACAAGATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAGGTGAGCAAGAACCTTCTTCATGCTAGAAAAATATTTTGTAACCTATACAAAAGGCACCAGTCATTCACACGTTCGATAAGAAAATGAACATCTTGCTGTGAGGGACCTTATAACTATAATATTCTGGCAGGTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCCACA</genome_strand>
        <mrna_strand>CTCACTGCCAGGAACAAAAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG..................................................................................................................................GTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390518" ref_strand="+" ref_description="SGN-E390518 [TUS-40-D5]">
      <seq>gttgttttgggtattgagcgatcagttcctgaatgatggtgactgtaaatctgaagtcgctgctgatattctcagcctttcttagggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaattgtgagcccatcatctgtgccataatcctttggattattctatgtctaatgaatggtcgtttagtacaagctgcattttggtatgggcttgtcgtccacatgaggatctatccaataatttatgctcttccaatcattttagttcttgatcccttgttctttccatatggtaacaaacctgctcttgtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63494" stop="65997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63794" g_stop="64099" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="306" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64662" i_length="563">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.085" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64663" g_stop="64845" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="489" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64846" i_stop="65561" i_length="716">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65562" g_stop="65697" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="625" r_length="136" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E390518" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63794" e_stop="64099"/>
          <exon e_start="64663" e_stop="64845"/>
          <exon e_start="65562" e_stop="65697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTTTGGGTATTGAGCGATCAGTTCCTGAATGATGGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCAAAATGGTTCCTGTCTCCTTAATCTACCTTACAATATTATTGGGGGTAATGTAAATGACTGTAAAGAGGGGGGCAGATGGAAGGGGAAGTATTTAGGGGAATCATGATTTAAGTGATGAAACTGTAAAAAAGAAGGTATTCTCATTGAACACCGATCAAGATTGAGTCTTTCTCCCACTCCTCCACAGGGTTAGGTGTATAGGCCCAACACAAAATTATCGGACAGTGAATGAGGTTTTAGCAACCAATCAATGTAAGCTGAATATTCATCTTTTACTTGATTTCTCAATAAAGCATGAAACAAGATTTGCCCTGAATCTACCTCTGTTTCTTTTCATAGTTATTATGCAATTTGAAGTTATAGTGAACCTTTAGTTTAAAGGGAAAGTAGAAACCGAGAATGTTAACTCTGGAACTTTATAGGGTTAAACAATAAACTCTTTTTAATTGAGAATTTTTCCAAGAATCCTCCGATATTTTGGGTCAGATAACTGTATTTCCACTTGGGTTAATGGGAACTGTGGTTTCATTTTTTCTTTGGAAGTTATAAATCTTGACGCTCTATTGATTTTGGTGATGTTTCCCTGATCAGGTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCGTCCACATGAGGATCTATCCAATAATTTATGCTCTTCCAATCATTTTAGTTCTTGATCCCTTGTTCTTCCAGTATGGTACAAAACCTGCTCTTGTGAA</genome_strand>
        <mrna_strand>GTTGTTTTGGGTATTGAGCGATCAGTTCCTGAATGATGGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCGTCCACATGAGGATCTATCCAATAATTTATGCTCTTCCAATCATTTTAGTTCTTGATCCCTTGTTCTTTCCATATGGTAACAAACCTGCTCTTGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E396262" ref_strand="+" ref_description="SGN-E396262 [TUS-40-F7]">
      <seq>gttgttttgggtattgagcgatcagttcctgaatgatggtgactgtaaatctgaagtcgctgctgatattctcagcctttcttagggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatcttctcgtgggatttcttatcaacgccattctaaagctaataggggtgcctgagaaattatgcacctattcggtgatggtatggctttttgaatccatttacctttacccttggaactcgtgggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63494" stop="65089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63794" g_stop="64099" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="306" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64662" i_length="563">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.085" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64663" g_stop="64790" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="435" r_length="129" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E396262" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63794" e_stop="64099"/>
          <exon e_start="64663" e_stop="64790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGTTTTGGGTATTGAGCGATCAGTTCCTGAATGATGGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGC-TTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAAT</genome_strand>
        <mrna_strand>GTTGTTTTGGGTATTGAGCGATCAGTTCCTGAATGATGGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAATAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTTGAATCCATTTACCTTTACCCTTGGAACTCGTGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322466" ref_strand="+" ref_description="SGN-E322466 [cTOB-26-C2]">
      <seq>agcgatcagttcctgaatgatggtgactgtaaatctgaagtcgctgctgatattctcagcctttcttagggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaattgtgagcccatcatctgtgccataatcctttggattattctatgtctaatgaatggtcgtttagtacaagctgcattttggtatgggcttgtcgtccacatgaggatctatccnataattatgctcttccaatcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63510" stop="65945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63810" g_stop="64099" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64662" i_length="563">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.085" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64663" g_stop="64845" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="473" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64846" i_stop="65561" i_length="716">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65562" g_stop="65645" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="556" r_length="83" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E322466" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63810" e_stop="64099"/>
          <exon e_start="64663" e_stop="64845"/>
          <exon e_start="65562" e_stop="65645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGATCAGTTCCTGAATGATGGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCAAAATGGTTCCTGTCTCCTTAATCTACCTTACAATATTATTGGGGGTAATGTAAATGACTGTAAAGAGGGGGGCAGATGGAAGGGGAAGTATTTAGGGGAATCATGATTTAAGTGATGAAACTGTAAAAAAGAAGGTATTCTCATTGAACACCGATCAAGATTGAGTCTTTCTCCCACTCCTCCACAGGGTTAGGTGTATAGGCCCAACACAAAATTATCGGACAGTGAATGAGGTTTTAGCAACCAATCAATGTAAGCTGAATATTCATCTTTTACTTGATTTCTCAATAAAGCATGAAACAAGATTTGCCCTGAATCTACCTCTGTTTCTTTTCATAGTTATTATGCAATTTGAAGTTATAGTGAACCTTTAGTTTAAAGGGAAAGTAGAAACCGAGAATGTTAACTCTGGAACTTTATAGGGTTAAACAATAAACTCTTTTTAATTGAGAATTTTTCCAAGAATCCTCCGATATTTTGGGTCAGATAACTGTATTTCCACTTGGGTTAATGGGAACTGTGGTTTCATTTTTTCTTTGGAAGTTATAAATCTTGACGCTCTATTGATTTTGGTGATGTTTCCCTGATCAGGTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCGTCCACATGAGGATCTATCCAATAATTTATGCTCTTCCAATCATTT</genome_strand>
        <mrna_strand>AGCGATCAGTTCCTGAATGATGGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCGTCCACATGAGGATCTATCCNATAA-TTATGCTCTTCCAATCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705050" ref_strand="+" ref_description="SGN-E705050 [FA26AB02]">
      <seq>ggtgactgtaaatctgaagtcgctgctgatattctcagcctttcttagggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaattgtgagcccatcatctgtgccataatcctttggattattctatgtctaatgaatggtcgtttagtacaagctgcattttggtatgggcttgtcgtccacatgaggatctatccaataatttatgctcttccaatcattttagttcttgatcccttgttcttccagtatggtacaaaacctgctcttgtgaattggagttctagaaaaagtaagtcacagcagacttccagctgtaaaaagcttatggatccttgttgtatgtgcaactttttaacaagcctttttacctggaggaggataatgtttgggcttatttctggagctttgttctttctccttactgggattttcttctttttatatggctgcgatttcttgcatgaagcactgctctatcatctcacacgtacagaccctangcacaatttctcaatttatttctaccatatatatctgcactatgaacatgaggtatctatcttggaaaagctcgtctcgtttctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63531" stop="66311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63831" g_stop="64099" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64662" i_length="563">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.085" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64663" g_stop="64845" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="452" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64846" i_stop="65561" i_length="716">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65562" g_stop="66011" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="902" r_length="450" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E705050" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>902</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63831" e_stop="64099"/>
          <exon e_start="64663" e_stop="64845"/>
          <exon e_start="65562" e_stop="66011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCAAAATGGTTCCTGTCTCCTTAATCTACCTTACAATATTATTGGGGGTAATGTAAATGACTGTAAAGAGGGGGGCAGATGGAAGGGGAAGTATTTAGGGGAATCATGATTTAAGTGATGAAACTGTAAAAAAGAAGGTATTCTCATTGAACACCGATCAAGATTGAGTCTTTCTCCCACTCCTCCACAGGGTTAGGTGTATAGGCCCAACACAAAATTATCGGACAGTGAATGAGGTTTTAGCAACCAATCAATGTAAGCTGAATATTCATCTTTTACTTGATTTCTCAATAAAGCATGAAACAAGATTTGCCCTGAATCTACCTCTGTTTCTTTTCATAGTTATTATGCAATTTGAAGTTATAGTGAACCTTTAGTTTAAAGGGAAAGTAGAAACCGAGAATGTTAACTCTGGAACTTTATAGGGTTAAACAATAAACTCTTTTTAATTGAGAATTTTTCCAAGAATCCTCCGATATTTTGGGTCAGATAACTGTATTTCCACTTGGGTTAATGGGAACTGTGGTTTCATTTTTTCTTTGGAAGTTATAAATCTTGACGCTCTATTGATTTTGGTGATGTTTCCCTGATCAGGTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCGTCCACATGAGGATCTATCCAATAATTTATGCTCTTCCAATCATTTTAGTTCTTGATCCCTTGTTCTTCCAGTATGGTACAAAACCTGCTCTTGTGAATTGGAGTTCTAGAAAAAGTAAGTCACAGCAGACTTCCAGCTGTAAAAAGCTTATGGATCCTTGTTGTATGTGCAACTTTTTAACAAGCCTTTTTACCTGGAGGAGGATAATGTTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTAGGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGTTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGC</genome_strand>
        <mrna_strand>GGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCGTCCACATGAGGATCTATCCAATAATTTATGCTCTTCCAATCATTTTAGTTCTTGATCCCTTGTTCTTCCAGTATGGTACAAAACCTGCTCTTGTGAATTGGAGTTCTAGAAAAAGTAAGTCACAGCAGACTTCCAGCTGTAAAAAGCTTATGGATCCTTGTTGTATGTGCAACTTTTTAACAAGCCTTTTTACCTGGAGGAGGATAATGTTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTANGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGGTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544432" ref_strand="+" ref_description="SGN-E544432 [TUS-66-M5]">
      <seq>ggtgactgtaaatctgaagtcgctgctgatattctcagcctttcttagggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatatgcttaatgaaacttacattgagttcgtgcggcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaattgtgagcccatcatctgtgccataatcctttggattattctatgtctaatgaatggtaaaactttcagtaccttctaattacatttaatatagttatattgagaacttactcctaaatttttctttttcaatgtatagtttatttccctactgctattttctctgttattatctctttcaaaatggttcctgtctccttaatctaccttacaatattattgggggtaatgtaaatgactgtaaagaggggggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63531" stop="65343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63831" g_stop="64099" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64624" i_length="525">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64625" g_stop="65043" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="688" r_length="419" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E544432" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63831" e_stop="64099"/>
          <exon e_start="64625" e_stop="65043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCAAAATGGTTCCTGTCTCCTTAATCTACCTTACAATATTATTGGGGGTAATGTAAATGACTGTAAAGAGGGGGGC</genome_strand>
        <mrna_strand>GGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCAAAATGGTTCCTGTCTCCTTAATCTACCTTACAATATTATTGGGGGTAATGTAAATGACTGTAAAGAGGGGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308000" ref_strand="+" ref_description="SGN-E308000 [cLEY-14-M11]">
      <seq>gtgactgtaaatctgaagtcgctgctgatattctcagcctttcttagggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatatgcttaatgaaacttacattgagttcgtgcggcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaattgtgagcccatcatctgtgccataatcctttggattattctatgtctaatgaatggtaaaactttcagtaccttctaattacatttaatatagttatattgagaacttactcctaaatttttctttttcaatgtatagtttatttccctactgctattttctctgttattatctctttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63532" stop="65270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63832" g_stop="64099" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64624" i_length="525">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64625" g_stop="64970" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="614" r_length="346" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E308000" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308000" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63832" e_stop="64099"/>
          <exon e_start="64625" e_stop="64970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCA</genome_strand>
        <mrna_strand>GTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200948" ref_strand="+" ref_description="SGN-E200948 [cLEC-5-A11]">
      <seq>tgactgtaaatctgaagtcgctgctgatattctcagcctttcttagggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatatgcttaatgaaacttacattgagttcgtgcggcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63533" stop="65089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63833" g_stop="64099" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64624" i_length="525">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64625" g_stop="64789" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="432" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E200948" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63833" e_stop="64099"/>
          <exon e_start="64625" e_stop="64789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAA</genome_strand>
        <mrna_strand>TGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325051" ref_strand="+" ref_description="SGN-E325051 [cTOC-13-J13]">
      <seq>agcctttcttaaggtgtttttgataatctatggagaatggcaagatacccatatggaggttcgatacacagatgtggactatcttgttttctcagatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaattgtgagcccatcatctgtgccataatcctttggattattctatgtctaatgaatggtcgtttagtacaagctgcattttggtatgggcttgtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63567" stop="65900"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63867" g_stop="64099" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64662" i_length="563">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.085" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64663" g_stop="64845" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="416" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64846" i_stop="65561" i_length="716">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65562" g_stop="65600" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="455" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E325051" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63867" e_stop="64099"/>
          <exon e_start="64663" e_stop="64845"/>
          <exon e_start="65562" e_stop="65600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCAAAATGGTTCCTGTCTCCTTAATCTACCTTACAATATTATTGGGGGTAATGTAAATGACTGTAAAGAGGGGGGCAGATGGAAGGGGAAGTATTTAGGGGAATCATGATTTAAGTGATGAAACTGTAAAAAAGAAGGTATTCTCATTGAACACCGATCAAGATTGAGTCTTTCTCCCACTCCTCCACAGGGTTAGGTGTATAGGCCCAACACAAAATTATCGGACAGTGAATGAGGTTTTAGCAACCAATCAATGTAAGCTGAATATTCATCTTTTACTTGATTTCTCAATAAAGCATGAAACAAGATTTGCCCTGAATCTACCTCTGTTTCTTTTCATAGTTATTATGCAATTTGAAGTTATAGTGAACCTTTAGTTTAAAGGGAAAGTAGAAACCGAGAATGTTAACTCTGGAACTTTATAGGGTTAAACAATAAACTCTTTTTAATTGAGAATTTTTCCAAGAATCCTCCGATATTTTGGGTCAGATAACTGTATTTCCACTTGGGTTAATGGGAACTGTGGTTTCATTTTTTCTTTGGAAGTTATAAATCTTGACGCTCTATTGATTTTGGTGATGTTTCCCTGATCAGGTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCG</genome_strand>
        <mrna_strand>AGCCTTTCTTAAGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325131" ref_strand="+" ref_description="SGN-E325131 [cTOC-13-D21]">
      <seq>gatgcagctgctttagttgctgccggaaaatccccttatcaaagatctacatatcgttactctcccttgattgcttttcttcttgtgcccaattctttcgttcatccttcttggggaaagtttatcttctccgcttcagatcttctcgtgggatttcttatcaacgccattctaaagctaagaggggtgcctgagaaattatgcacctattcggtgatggtatggcttttgaatccatttacctttaccattggaactcgtgggaattgtgagcccatcatctgtgccataatcctttggattattctatgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="63661" stop="65137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63961" g_stop="64099" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64100" i_stop="64662" i_length="563">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.085" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64663" g_stop="64837" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="314" r_length="175" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E325131" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>314</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63961" e_stop="64099"/>
          <exon e_start="64663" e_stop="64837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAGGTGAGATTTTCCCTTTCTCTTCTCTTTTTCTTTTTTTCTTTCTTTGTCCCTTCAATTTTGTGGGTTCTTTTTATTCCCGTTGAATGATGAAGAAGTCTGAGCTTCACAATTTTCGTATGATTTGGGTTTATTATTTGTGAGAACAGACAGATACATGAAATCCTACTTTTGTATTAAGCTCTTGTTAGGTTCTAATTTCAAGACAACGCAAAGGTTCCATTTTTAATTGACTCATTTGGAATTCTTGTTTTTCCTCATACAAATGCTCCTTGTATATGGTTTCCAAGAGATTTTTGCATCTCTATCTGCTTAGGTTTCATTGGCAATCTTTGGGGTTGTTGTGGATGTATAACTAAAGACTGGATGAATTGTTGATTAGGGCATGAACTTGTAGATGATCAATCTAAGAGTAGACAAATAGCTTCTGAACTTGCACTCTTGTATGTGGGTTTATTGTCTCTTCTTATTGCAAAAAATGCATAATTGATATTCTTAGAAGACATCTTAATTATGTTTCCAAAACAGATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCT</genome_strand>
        <mrna_strand>GATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E254224" ref_strand="+" ref_description="SGN-E254224 [cLEG-27-G17]">
      <seq>tttgggcttatttctggagctttgttctttctccttactgggattttcttctttttatatggctgcgatttcttgcatgaagcactgctctatcatctcacacgtacagaccctaggcacaatttctcaatttatttctaccatatatatctgcactatgaacatgagttatctatcttggaaaagctcgtctcgtttctgcctcagattatggtgcagctagttcttgttttccgctttgcacaagattttccattttgcttctttgtgcagactgtggcatttgtcgcatttaacaaggttatgactgctcaatactttgtttggttcttctgtctcttgccactaatcctgccatggaccaacatgaagctcggaggaaaaggactggtctgcatcttgttgtggatggcagctcanggtcactggttattgtggggttatttgcttgaatttaaaggaaagaatgtctttcttcaactctgggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="65510" stop="66693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65810" g_stop="66109" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66110" i_stop="66204" i_length="95">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.414" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66205" g_stop="66393" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="489" r_length="189" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E254224" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254224" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65810" e_stop="66109"/>
          <exon e_start="66205" e_stop="66393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTAGGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGTTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGCCTCAGATTATGGTGCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAGGTTTGTTGGCAAGGCTTGATTATTTTTTATGTTGAGAATCAGTGAATATTAGCTTGATTTTCCTTTAGCAAGATAACGTTCTTTTCCTCTGACAGGTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTG</genome_strand>
        <mrna_strand>TTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTAGGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGTTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGCCTCAGATTATGGTGCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAG...............................................................................................GTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCANGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544431" ref_strand="+" ref_description="SGN-E544431 [TUS-66-M5](-)">
      <seq>gcagctagttcttgttttccgctttgcacaagattttccattttgcttctttgtgcagactgtggcatttgtcgcatttaacaaggtttgttggcaaggcttgattattttttatgttgagaatcagtgaatattagcttgattttcctttagcaagataacgttcttttcctctgacaggttatgactgctcaatactttgtttggttcttctgtctcttgccactaatcctgccatggaccaacatgaagctcggaggaaaaggactggtctgcatcttgttgtggatggcagctcagggtcactggttattgtggggttatttgcttgaatttaaaggaaagaatgtctttcttcaactctgggtggcaggtttgctgttcttggctgcaaatactttcgttcttatcaatattattcagcaacacacatatagtcccgtcttccaacagtcatctcgtgcctcttcaaagaaacaagtcaaacagagatgaggaatcagatcatatacctcctaattcactgggggaggaattttcgagctagtagtgtatttagccatattcggtacttgtagagcctttcatcatcaggcaaagcacttggcttattcatagctccatgcttaaaaataccttcactaaagatgtagcaagagatcgttattttgaagttttggtcgttttgcttttagagcatacggaatgatagcaatttacaatttgtttgttgcaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="65725" stop="67059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66025" g_stop="66758" g_length="734"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="734" r_length="734" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="735" polyA_stop="756"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E544431" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66025" e_stop="66758"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAGGTTTGTTGGCAAGGCTTGATTATTTTTTATGTTGAGAATCAGTGAATATTAGCTTGATTTTCCTTTAGCAAGATAACGTTCTTTTCCTCTGACAGGTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGC</genome_strand>
        <mrna_strand>GCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAGGTTTGTTGGCAAGGCTTGATTATTTTTTATGTTGAGAATCAGTGAATATTAGCTTGATTTTCCTTTAGCAAGATAACGTTCTTTTCCTCTGACAGGTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390517" ref_strand="+" ref_description="SGN-E390517 [TUS-40-D5](-)">
      <seq>gttatttgcttgaatttaaaggaatgaatgtctttcttcaactctgggtggcaggtttgctgtttttggctgcaaatactttcgttcttatcaatattattcagcaacacacatatagtcccgtcttccaacagtcatctcgtgcctcttcaaagaaacaagtcaaacagagatgaggaatcagatcatatacctcctaattcactgggggaggaattttcgagctagtagtgtatttagccatattcggtacttgtagagcctttcatcatcaggcaaagcacttggcttattcatagctccatgcttaaaaataccttcactaaagatgtagcaagagatcgttattttgaagttttggtcgttttgcttttagagcatacggaatgatagcaatttacaatttgtttgttgcatttggtataagtttaattcagttaacctctcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="66044" stop="67091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66344" g_stop="66790" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="448" polyA_stop="461"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E390517" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66344" e_stop="66790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGCATTTGGTATAAGTTTAATTCAGTTAACCTCTC</genome_strand>
        <mrna_strand>GTTATTTGCTTGAATTTAAAGGAATGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTTTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGCATTTGGTATAAGTTTAATTCAGTTAACCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E724295" ref_strand="+" ref_description="SGN-E724295 [FC23CG01]">
      <seq>ccatggggatccgatggcccatcttctcctttcctcattcactatataaatcctctccgcccttctttctcatatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72319" stop="74026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72626" g_stop="72857" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="247" r_length="232" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="512" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73726" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="882" r_length="370" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E724295" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724295" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72626" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCCATCTTCTCCTTTCCTCATTCACTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTT</genome_strand>
        <mrna_strand>GGCCCATCTTCTCCTTTCCTCATTCACTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720665" ref_strand="+" ref_description="SGN-E720665 [FC11BH05]">
      <seq>aatcggccgaattggcccatcttctcctttcctcattcactatataaatcctctccgcccttctttctcatatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72327" stop="74025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72626" g_stop="72857" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="245" r_length="232" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="510" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73725" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="879" r_length="369" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E720665" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72626" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCCATCTTCTCCTTTCCTCATTCACTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTT</genome_strand>
        <mrna_strand>GGCCCATCTTCTCCTTTCCTCATTCACTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343021" ref_strand="+" ref_description="SGN-E343021 [cTOF-11-K7]">
      <seq>ctatataaatcctctccgcccttctttctcatatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgangaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtncgatgatggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72352" stop="73786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72652" g_stop="72857" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="471" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73486" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="601" r_length="130" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E343021" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72652" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73486"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGAC</genome_strand>
        <mrna_strand>CTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGANGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTNCGATGATGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273675" ref_strand="+" ref_description="SGN-E273675 [cLEN-6-F2]">
      <seq>tcatatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72380" stop="73453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72680" g_stop="72857" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73153" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="380" r_length="202" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E273675" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72680" e_stop="72857"/>
          <exon e_start="72952" e_stop="73153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCT</genome_strand>
        <mrna_strand>TCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720236" ref_strand="+" ref_description="SGN-E720236 [FC10AH04]">
      <seq>gggcgattggcggccaatcggccgaattcccatggggatccgatgatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttttcttcttgttgttgttatatagtaatagtacaaaggtcatcaactttgaaagcaatgatgatttcctatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72378" stop="74096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72684" g_stop="72857" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="219" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="484" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73796" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="924" r_length="440" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E720236" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>879</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72684" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73796"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATC</genome_strand>
        <mrna_strand>ATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E720740" ref_strand="+" ref_description="SGN-E720740 [FC11CH03]">
      <seq>aatcggccgaattgatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttctttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttttcttcttgttgttgttatatagaaatagtacaaaggtcatcaactttgaaagcaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72384" stop="74084"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72684" g_stop="72857" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="188" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="453" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73784" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="882" r_length="429" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E720740" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72684" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTC-TTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGA</genome_strand>
        <mrna_strand>ATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGAAATAGTACAAAGGTCATCAACTTTGAAAGCAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723379" ref_strand="+" ref_description="SGN-E723379 [FC20BC05]">
      <seq>aatcggccgaattgatctcatcccacaacaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72384" stop="74031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72684" g_stop="72857" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="188" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="453" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73731" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="828" r_length="375" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E723379" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72684" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTC</genome_strand>
        <mrna_strand>ATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340269" ref_strand="+" ref_description="SGN-E340269 [cTOF-2-L18]">
      <seq>acaaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtctttttcgttcatagttaggatgtgtaggaacctcattggctttctttttttctttctccatctgatgcaattttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72397" stop="73977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72697" g_stop="72857" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="426" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73677" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="750" r_length="324" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E340269" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72697" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTA-GATGTGTAGGAACCTCA-TGGCTTTC-TTTTTTCTTCCTCCATCTGATGCAATTTTTTT</genome_strand>
        <mrna_strand>ACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTTCGTTCATAGTTAGGATGTGTAGGAACCTCATTGGCTTTCTTTTTTTCTTTCTCCATCTGATGCAATTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289588" ref_strand="+" ref_description="SGN-E289588 [cLET-4-G13]">
      <seq>aaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggcgcgtcgtcgtggtgtatgttcacaccgatggggagaaaagcgagaatttccccggaggatcagctttacgatcgttctacgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72399" stop="73407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72699" g_stop="72857" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73107" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="315" r_length="156" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E289588" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>315</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72699" e_stop="72857"/>
          <exon e_start="72952" e_stop="73107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATG</genome_strand>
        <mrna_strand>AAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCGCGTCGTCGTGGTGTATGTTCACACCGATGGGGAGAAAAGCGAGAATTTCCCCGGAGGATCAGCTTTACGATCGTTCTACGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289559" ref_strand="+" ref_description="SGN-E289559 [cLET-3-H12]">
      <seq>aaacgtagcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccggtcgccggggtgtatgttcacaccgatgtggagaaaagcgagaatttcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72399" stop="73376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72699" g_stop="72857" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73076" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="284" r_length="125" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E289559" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>284</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72699" e_stop="72857"/>
          <exon e_start="72952" e_stop="73076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCC</genome_strand>
        <mrna_strand>AAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGGTCGCCGGGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319257" ref_strand="+" ref_description="SGN-E319257 [cTOB-16-O17]">
      <seq>cgtagcgtttggcttttgcaacaatcgagattgagaaaaccatgtgtacagaagttgaacaacaacagcatatagagaaactggaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggataaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttacttgccacatttggtcgcttcatcttcagcggaaggttatatgggaaattgaagtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72402" stop="73763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72702" g_stop="72857" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="421" r_length="265" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73463" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="528" r_length="107" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E319257" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72702" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73463"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATC</genome_strand>
        <mrna_strand>CGTAGCGTTTGGCTTTTGCAACAATCGAGATTGAGAAAACCATGTGTACAGAAGTTGAACAACAACAGCATATAGAGAAACTGGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGATAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTACTTGCCACATTTGGTCGCTTCATCTTCAGCGGAAG............................................................................................................................................GTTATATGGGAAATTGAAGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319256" ref_strand="+" ref_description="SGN-E319256 [cTOB-16-O15]">
      <seq>cgtatcgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggaacatgtgaggaggaatgagattgggatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72402" stop="73733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72702" g_stop="72857" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="421" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73433" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="498" r_length="77" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E319256" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72702" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGC</genome_strand>
        <mrna_strand>CGTATCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAACATGTGAGGAGGAATGAGATTGGGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334616" ref_strand="+" ref_description="SGN-E334616 [cTOD-23-G4]">
      <seq>cgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccanggtctatggcgatgcgcctgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72407" stop="73834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72707" g_stop="72857" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="416" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73534" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="594" r_length="178" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E334616" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72707" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCC</genome_strand>
        <mrna_strand>CGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCANGGTCTATGGCGATGCGCCTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334435" ref_strand="+" ref_description="SGN-E334435 [cTOD-23-G3]">
      <seq>cgttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcctcaagccaggctcttccttgccacatttggtcccttcatcttcagcggagggttatatgggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72407" stop="73529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72707" g_stop="72857" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="416" r_length="265" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.894" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73369" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="429" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E334435" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72707" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73369"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAA</genome_strand>
        <mrna_strand>CGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCCTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCCCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E397680" ref_strand="+" ref_description="SGN-E397680 [TUS-46-K12]">
      <seq>ttttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccacattttgtgtacgatcatgatgaaaatcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72409" stop="73766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72709" g_stop="72857" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="414" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73466" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="524" r_length="110" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E397680" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72709" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTG</genome_strand>
        <mrna_strand>TTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCACATTTTGTGTACGATCATGATGAAAATCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210398" ref_strand="+" ref_description="SGN-E210398 [cLEC-35-N4]">
      <seq>tttgcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72410" stop="73756"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72710" g_stop="72857" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="413" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73456" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="513" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E210398" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210398" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72710" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGAT</genome_strand>
        <mrna_strand>TTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E210447" ref_strand="+" ref_description="SGN-E210447 [cLEC-35-A6]">
      <seq>gcttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72413" stop="73869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72713" g_stop="72857" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="410" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73569" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="623" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E210447" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72713" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATG</genome_strand>
        <mrna_strand>GCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E316223" ref_strand="+" ref_description="SGN-E316223 [cTOA-23-K12]">
      <seq>ttttgcaacaatcgagattcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72415" stop="73907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72715" g_stop="72857" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="408" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73607" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="659" r_length="251" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E316223" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72715" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTT</genome_strand>
        <mrna_strand>TTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E576577" ref_strand="+" ref_description="SGN-E576577 [59818]">
      <seq>taatcgaaattctaaaaaccatgtttacagaagttgaacaagaacagcttattgagaaactcgaaatcttcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagtagtgaacaagtatttagcggagaagatctttccagaacttgagaaaaggccgttcgctgtggtgtatgttcacaccgatgtggagaaaagcgagaattttcccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctgtttactttcttcaccctggccttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgattatctgtgggaacatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggtgatgcgcctgcagtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaaacttgtgggtttcttcttttttcttcctccatctgattgaatttttctgggctgtatatatgattagatggaggttagcaactagcaagcacttcttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72424" stop="74028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72723" g_stop="72857" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="400" r_length="265" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73728" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="776" r_length="376" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E576577" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E576577" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72723" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTT-TTTT--CTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTT-TTTTC</genome_strand>
        <mrna_strand>TAATCGAAATTCTAAAAACCATGTTTACAGAAGTTGAACAAGAACAGCTTATTGAGAAACTCGAAATCTTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTAGTGAACAAGTATTTAGCGGAGAAGATCTTTCCAGAACTTGAGAAAAGGCCGTTCGCTGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTTCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTGTTTACTTTCTTCACCCTGGCCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATTATCTGTGGGAACATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGTGATGCGCCTGCAGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAAACTTGTGGGTTTCTTCTTTTTTCTTCCTCCATCTGATTGAATTTTTCTGGGCTGTATATATGATTAGATGGAGGTTAGCAACTAGCAAGCACTTCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574814" ref_strand="+" ref_description="SGN-E574814 [34341]">
      <seq>caacaatctctaatcgaaattccaaaaaccatgtttacatgaagttgaacaagaacagcttattgagaaactcgaaatcttcaagatccaaggcagagataaacgtggccgcaaaactttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagtagtgaacaagtatttagcggagaagatctttccagaacttgagacaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaattttcccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggagggtgtttactttcttcaccctggccttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggaacatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctgggagagtgatcatgcccaggctctatgggtgatgcgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72424" stop="73826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72724" g_stop="72857" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="146" r_length="135" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="412" r_length="266" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73531" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="590" r_length="178" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E574814" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72724" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCGAGATTCAAAAAACCATGTTTACA-GAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGA-AAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCT-GGAGAGTGATCATG-CCAGGGTCTAT-GGCGATGCGCCT</genome_strand>
        <mrna_strand>AATCGAAATTCCAAAAACCATGTTTACATGAAGTTGAACAAGAACAGCTTATTGAGAAACTCGAAATCTTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAACTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTAGTGAACAAGTATTTAGCGGAGAAGATCTTTCCAGAACTTGAGACAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTTCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGGTGTTTACTTTCTTCACCCTGGCCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAACATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGGAGAGTGATCATGCCCAGGCTCTATGGGTGATGCGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575700" ref_strand="+" ref_description="SGN-E575700 [35365]">
      <seq>tttacttttgcaacaatctctaatcgaaattctaaaaaccatgtttacagcaagttgaacaagaacagcttattgagaaactcgaaatcttcaagatccaaggcagagataaacgtggccgcaaaactttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagtagtgaacaagtacttagcggagaagatctttccagaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaattttcccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggagggtgtttactttcttcaccctggccttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggaacatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccaagatctatggtgatgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72424" stop="73828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72724" g_stop="72857" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="156" r_length="135" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="421" r_length="265" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73529" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="594" r_length="173" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E575700" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E575700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72724" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73529"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCGAGATTCAAAAAACCATGTTTACAG-AAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGC</genome_strand>
        <mrna_strand>AATCGAAATTCTAAAAACCATGTTTACAGCAAGTTGAACAAGAACAGCTTATTGAGAAACTCGAAATCTTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAACTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTAGTGAACAAGTACTTAGCGGAGAAGATCTTTCCAGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTTCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGGTGTTTACTTTCTTCACCCTGGCCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAACATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAAGATCTATGGTGATGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E467314" ref_strand="+" ref_description="SGN-E467314 [cSTB-44-O21]">
      <seq>gttttacttttgcaacaatctctaatcgaaattctaaaaaccatgtttacagaagttgaacaagaacagcttattgagaaactcgaaatcttcaagatccaaggcagagataaacgtggccgcaaaactttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagtagtgaacaagtatttagcggagaagatctttccagaacttgagaaaaggccgttcgccgtggtgtgtgttcacaccgatgtggagaaaagcgagaattttgccggagtatcagctttacgatcgctctacgatgcgattccggtgaaagtccgagagaatctggagggtgtttactttcttcaccctggccttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72424" stop="73529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72724" g_stop="72857" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="157" r_length="134" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="422" r_length="265" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73369" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="435" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E467314" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72724" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73369"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAA</genome_strand>
        <mrna_strand>AATCGAAATTCTAAAAACCATGTTTACAGAAGTTGAACAAGAACAGCTTATTGAGAAACTCGAAATCTTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAACTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTAGTGAACAAGTATTTAGCGGAGAAGATCTTTCCAGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTGTGTTCACACCGATGTGGAGAAAAGCGAGAATTTTGCCGGAGTATCAGCTTTACGATCGCTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGGTGTTTACTTTCTTCACCCTGGCCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326717" ref_strand="+" ref_description="SGN-E326717 [cTOC-17-N10]">
      <seq>attcaaaaaaccatgtttacagaagttgaacaacaacagcatatagagaaactcgaaatattcaagatccaaggcagagataaacgtggccgcaaaattttgcgcatcatcggaaaattctttcctgctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacnatgtactccatgagatgcatctcataagataattggaagccttttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72431" stop="73899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72731" g_stop="72857" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="392" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73599" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="635" r_length="243" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E326717" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326717" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72731" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGC</genome_strand>
        <mrna_strand>ATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACNATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589047" ref_strand="-" ref_description="SGN-E589047 [42613]">
      <seq>tattgagaaactcgaaatcttcaagatccaaggcagagaataaacgtgcccgcaaaacctttgcgcatcatcggaaaattctttcctgctagaaatcttgagtgtttgaagtagtgaacaagtatttagcggagaagatctttccagaacttgagaaaaggccgttcgccgtggtgtatgttcacaccgatgtggagaaaagcgagaattttcccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggagggtgtttactttcttcaccctggccttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggaacatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggtgatgcgcctgcagtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttacagtcttttcggttcatagttagatgtgtaggaaccttgtggctttcttcttttttcttcctccatctgatgggaatttttttggtctgtatatacgattagatggaggttagcaactagcaagcacttctttttcttcttcttcttgttatatagtaatagtacaaaggttatcaactttgaaagcattgatggtttccaatctgaaaaatcctggaatgatgtttttttcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72472" stop="74129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72772" g_stop="72857" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.996" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72952" g_stop="73216" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="355" r_length="267" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73357" g_stop="73829" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="834" r_length="479" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E589047" ref_strand="-">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589047" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="72772" e_stop="72857"/>
          <exon e_start="72952" e_stop="73216"/>
          <exon e_start="73357" e_stop="73829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAG-ATAAACGTGGCCGCAAAA-TTTTGCGCATCATCGGAAAATTCTTTCCTGGTAACCTATTTTTTTTTTATGTATCGTTTTCTTGATTATTCTTGTTGAGATTTTGGTCTGAATTGTGGATTTGTTTTTGATTGTGGATAATCAGCTAGAAATC-TGAGTG-TTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGC--T-TTCTTTTTTCTTCCTCCATCTGAT-GCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCAC-T-TTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCT</genome_strand>
        <mrna_strand>TATTGAGAAACTCGAAATCTTCAAGATCCAAGGCAGAGAATAAACGTGCCCGCAAAACCTTTGCGCATCATCGGAAAATTCTTTCCTG..............................................................................................CTAGAAATCTTGAGTGTTTGAAGTAGTGAACAAGTATTTAGCGGAGAAGATCTTTCCAGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTTCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGGTGTTTACTTTCTTCACCCTGGCCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAACATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGTGATGCGCCTGCAGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTACAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTTGTGGCTTTCTTCTTTTTTCTTCCTCCATCTGATGGGAATTTTTTTGGTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTCTTTTTCTTCTTCTTCTTGTTATATAGTAATAGTACAAAGGTTATCAACTTTGAAAGCATTGATGGTTTCCAATCTGAAAAATCCTGGAATGATGTTTTTTTCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E341166" ref_strand="+" ref_description="SGN-E341166 [cTOE-22-H22]">
      <seq>gctagaaatctgagtgttgaagttgtgaacaagtatttagcggagaagatctttccggaacttgagaaaaggccgttcgccgcggtgtatgttcacaccgatgtggagaaaagcgagaatttccccggagtatcagctttacgatcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72651" stop="73461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72951" g_stop="73161" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E341166" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>211</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72951" e_stop="73161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTG</genome_strand>
        <mrna_strand>GCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGCGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E275764" ref_strand="+" ref_description="SGN-E275764 [cLEN-18-C8]">
      <seq>tcgtgccgaattcggcacgaggttcgttctacgatgcgattccggtgaaagtccgagagaatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72791" stop="74001"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73071" g_stop="73216" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73357" g_stop="73701" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="490" r_length="345" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E275764" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73071" e_stop="73216"/>
          <exon e_start="73357" e_stop="73701"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGA</genome_strand>
        <mrna_strand>TCGTGCCGAAT-TCGGCACGAGGTTCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351632" ref_strand="+" ref_description="SGN-E351632 [cTOS-8-A7]">
      <seq>aatctggaggctatttactttcttcaccctggtcttcaagccaggctcttccttgccacatttggtcgcttcatcttcagcggagggttatatgggaaattgaggtatgtgagcagggttgataatctgtgggagcatgtgaggaggaatgagattgggatgccagaatttgtgtacgatcatgatgaagatcttgagtaccgtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttttcttcttgttgntgttatatagtaatagtacaaaggtcatcaactttgaaagcaatgatgatttcctatctgaaaaatcctggaatgttgttatctttcttctggaagatgaatatatatacttttatgaggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="72831" stop="74159"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73131" g_stop="73216" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73357" g_stop="73859" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="589" r_length="503" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E351632" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351632" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73131" e_stop="73216"/>
          <exon e_start="73357" e_stop="73859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGGGTAAGAATGTCAATTCCTAAGACACATTACATTTTTTTTGGAAACCTGGATCCAATTTTCAAACAAATAGTATATCTTTCTATAATATATTATCTGTGTATTGACAAGGAAGAGATCTAACTGGGAGTTACTGTGCACAGGTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA</genome_strand>
        <mrna_strand>AATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG............................................................................................................................................GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGNTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227472" ref_strand="+" ref_description="SGN-E227472 [cLEL-30-H6](-)">
      <seq>gtccgatgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcaccgtgttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttttcttcttgttgttgttatatagtaatagtacaaaggtcatcaactttgaaagcaatgatgatttcctatctgaaaaatcctggaatgttgttatctttcttctggaagatgaatatatatacttttatgaggaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="73173" stop="120297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73473" g_stop="73859" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73860" i_stop="73960" i_length="101">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.635" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73961" g_stop="73977" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="405" r_length="17" r_score="0.471"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E227472" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E227472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73473" e_stop="73859"/>
          <exon e_start="73961" e_stop="73977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACC-TGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGAGTATTGTGTTGTGGTCTGATCAAGAAAATAAAATGAAGTAGAAGAATCGTAAGACTGGTTTTTAATTTCATCGAGTATATATAGTGCTTGTCCTCTATCAGTGAATAATGATTAGCAA</genome_strand>
        <mrna_strand>GTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCGTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA.....................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227400" ref_strand="+" ref_description="SGN-E227400 [cLEL-30-H6](-)">
      <seq>tgatggactatggcctggagagtgatcatgccagggtctatggcgatgcgcctgccgtagactcacctggttacaatgtactccatgagatgcatctcataagataattggaagccttttgcagtcttttcggttcatagttagatgtgtaggaacctcatggctttcttttttcttcctccatctgatgcaatttttttgctctgtatatacgattagatggaggttagcaactagcaagcacttttttcttcttggtggtgttatatagtaatagtacaaaggtcatcaactttgaaagcaatgatgatttcctatctgaaaaatcctggaatggtgttatctttcttctggaagatgaatatatatacttttatgaggaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="73179" stop="120297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73479" g_stop="73859" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73860" i_stop="73960" i_length="101">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.635" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73961" g_stop="73977" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="399" r_length="17" r_score="0.471"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E227400" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E227400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73479" e_stop="73859"/>
          <exon e_start="73961" e_stop="73977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCT-GTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGAGTATTGTGTTGTGGTCTGATCAAGAAAATAAAATGAAGTAGAAGAATCGTAAGACTGGTTTTTAATTTCATCGAGTATATATAGTGCTTGTCCTCTATCAGTGAATAATGATTAGCAA</genome_strand>
        <mrna_strand>TGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGGTGGTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGGTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA.....................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549902" ref_strand="+" ref_description="SGN-E549902 [TUS-6-B23]">
      <seq>atacaatcatcaccttgaactaggatataaggttgagaggcacttaaatgatggagattttgttctcttcaatcggcaacccagtctacataaaatgtctattatgggacataagattaagatcatgccatactcaactttctgcttgaatttatctttcatttctttcttacaatgctgattttgatggtgacgaaatgaacatgcatgttccacagtcatttgaaaccagagcataggtgctggagcttatgatggtccctaagtgtattgtttcaccccaggcaaactgtaattggtatcgtccaggatacccttttaggttgccgcgaagttattaaaagagatatctttatagaaaaggatgtctttatgaacatcttaatgtggtgggaggattttgatgggaaagtacccgctccagtgattcttaaaccaaggccacattggactggaaagcaagtgtttaacctcatcataccaaaacaaataaatcttttaagatattctgcatggcataatgattcagagaaaggatacataactcctggaaatactcaagttataatagagaaaggggagttgctatctggtactctttgcaaaagactcttgggacgtctgcttcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="78024" stop="76621"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77724" g_stop="77694" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77693" i_stop="77613" i_length="81">
            <donor d_prob="0.969" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77612" g_stop="77281" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="363" r_length="332" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77280" i_stop="77190" i_length="91">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77189" g_stop="76921" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="631" r_length="268" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E549902" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549902" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77724" e_stop="77694"/>
          <exon e_start="77612" e_stop="77281"/>
          <exon e_start="77189" e_stop="76921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACAATCATCACCTTGAACTAGGATATAAGGTTTGTTTCTTTCAGTTTCTCGTAATTGAGGGGCTTTTGATGTCTGCGGTAGCTCCCTAACCTCCAATGCTGCCAATGCAGGTTGAGAGGCACTTAAATGATGGAGATTTTGTTCTCTTCAATCGGCAACCCAGTCTACATAAAATGTCTATTATGGGACATAGGATTAAGATCATGCCATACTCAACTTTCTGCTTGAATTTATCTTTCATTTCTTTCTTACAATGCTGATTTTGATGGTGACGAAATGAACATGCATGTTCCACAGTCATTTGAAACCAGAGCAGAGGTGCTGGAGCTTATGATGGTCCCTAAGTGTATTGTTTCACCCCAGGCAAACTGTAATTGGTATCGTCCAGGATACCCTTTTAGGTTGCCGCGAAGTTATTAAAAGAGATATCTTTATAGAAAAGGTGAATCTGCATGTGCCATTTCATAATTTCTTTATCATATCTTTCATGATTTTGCATGATCCAGTAAAGAATGCTTACTTCCGGTTTGCAGGATGTCTTTATGAACATCTTAATGTGGTGGGAGGATTTTGATGGGAAAGTACCCGCTCCAGTGATTCTTAAACCAAGGCCACATTGGACTGGAAAGCAAGTGTTTAACCTCATCATACCAAAACAAATAAATCTTTTAAGATATTCTGCATGGCATAATGATTCAGAAAAAGGATACATAACTCCTGGAAATACTCAAGTTAGAATAGAGAAAGGGGAGTTGCTATCTGGTACTCTTTGCAAAAAGACTCTTGGGACGTCTGCTTCATG</genome_strand>
        <mrna_strand>ATACAATCATCACCTTGAACTAGGATATAAG.................................................................................GTTGAGAGGCACTTAAATGATGGAGATTTTGTTCTCTTCAATCGGCAACCCAGTCTACATAAAATGTCTATTATGGGACATAAGATTAAGATCATGCCATACTCAACTTTCTGCTTGAATTTATCTTTCATTTCTTTCTTACAATGCTGATTTTGATGGTGACGAAATGAACATGCATGTTCCACAGTCATTTGAAACCAGAGCATAGGTGCTGGAGCTTATGATGGTCCCTAAGTGTATTGTTTCACCCCAGGCAAACTGTAATTGGTATCGTCCAGGATACCCTTTTAGGTTGCCGCGAAGTTATTAAAAGAGATATCTTTATAGAAAAG...........................................................................................GATGTCTTTATGAACATCTTAATGTGGTGGGAGGATTTTGATGGGAAAGTACCCGCTCCAGTGATTCTTAAACCAAGGCCACATTGGACTGGAAAGCAAGTGTTTAACCTCATCATACCAAAACAAATAAATCTTTTAAGATATTCTGCATGGCATAATGATTCAGAGAAAGGATACATAACTCCTGGAAATACTCAAGTTATAATAGAGAAAGGGGAGTTGCTATCTGGTACTCTTTGC-AAAAGACTCTTGGGACGTCTGCTTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E242701" ref_strand="+" ref_description="SGN-E242701 [cLEF-14-B14]">
      <seq>ccaagtatataactagggacgacgaccaaaggcttgatcttcgatacaatcatcaccttgaactaggatataaggttgagaggcacttacatgatggagattttgctctcttcaatcggcaacccactctacataaaatgtctattatgggacataggattaagatcatgccatactcaactttctgcttgaatttatctttcatttctttcttacaatgctgattttgatggtgacgaaatgaacatgcatgttccacagtcatttgaaaccatagcacaggtgctggagcttactgatggtccctaaatgtattgttgcaccccagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="78067" stop="77059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77767" g_stop="77694" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77693" i_stop="77613" i_length="81">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77612" g_stop="77359" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="329" r_length="255" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E242701" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77767" e_stop="77694"/>
          <exon e_start="77612" e_stop="77359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGTATATAACTAGGGACGACGACCAAAGGCTTGATCTTCGATACAATCATCACCTTGAACTAGGATATAAGGTTTGTTTCTTTCAGTTTCTCGTAATTGAGGGGCTTTTGATGTCTGCGGTAGCTCCCTAACCTCCAATGCTGCCAATGCAGGTTGAGAGGCACTTAAATGATGGAGATTTTGTTCTCTTCAATCGGCAACCCAGTCTACATAAAATGTCTATTATGGGACATAGGATTAAGATCATGCCATACTCAACTTTCTGCTTGAATTTATCTTTCATTTCTTTCTTACAATGCTGATTTTGATGGTGACGAAATGAACATGCATGTTCCACAGTCATTTGAAACCAGAGCAGAGGTGCTGGAGCTTA-TGATGGTCCCTAAGTGTATTGTTTCACCCCAGG</genome_strand>
        <mrna_strand>CCAAGTATATAACTAGGGACGACGACCAAAGGCTTGATCTTCGATACAATCATCACCTTGAACTAGGATATAAG.................................................................................GTTGAGAGGCACTTACATGATGGAGATTTTGCTCTCTTCAATCGGCAACCCACTCTACATAAAATGTCTATTATGGGACATAGGATTAAGATCATGCCATACTCAACTTTCTGCTTGAATTTATCTTTCATTTCTTTCTTACAATGCTGATTTTGATGGTGACGAAATGAACATGCATGTTCCACAGTCATTTGAAACCATAGCACAGGTGCTGGAGCTTACTGATGGTCCCTAAATGTATTGTTGCACCCCAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340783" ref_strand="+" ref_description="SGN-E340783 [cTOF-5-I4]">
      <seq>ctgagaggagacgaaagaagcgaaaaccagatctgtactgaacaagtgaaattgactgaagaatggagtcttaaaatagaaacttacatatagattaatcaaaaccctctgttatctatcttgttcgaaaaaaaaacaaaataattattctactgtataaatttcttctgtagaggtgtaacctaggttgcgccaccatggatttgcgcttccccttctagccggcggaggttgccaaggtccggacggtccagttcggcattgtcagcgccgacgaaattagataaatgtctgtggtgcacattgagcatggtgagactacggagttgagcgatcctcgacttgggacgattgatcggaagatgaagtgtaagacgtgtatggcgaacatggctgatgtccggggcattttggtcaccttgagcttgcgaaacctatgtttcatataggttttatggaacctgttcttagtatccttcggtgtgtctgcttcaattgctccaaaattctggcggatgaggacaatcccaagttcaaacaagccatgagaatcangaatcctaaaaacaggcttagaaagatgttggatgcttgcaagaacaaaacanaatgtgaaggangggatgaagttgatgtaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="88903" stop="78683"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88603" g_stop="88323" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88322" i_stop="88242" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88241" g_stop="88003" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="520" r_length="239" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88002" i_stop="79102" i_length="8901">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79101" g_stop="78983" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="639" r_length="119" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E340783" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E340783" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88603" e_stop="88323"/>
          <exon e_start="88241" e_stop="88003"/>
          <exon e_start="79101" e_stop="78983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGAGGAGACGAAAGAAGCGAAAACCAGATCTGTACTGAACAAGTGAAATTGACTGAAGAATGGAGTCTTAAAATAGAAACTTACATATAGATTAATCAAAACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATTGTAATTTTCACTAATCTTGATTCATTTTGTTGAATTCTCTAGGGTTTAAATTTGATTTAGTTTTTGTTTCTTCGTTTCCAGAGATAAATGTCTGTGGTGCACATTGAGCATGGTGAGACTACGGAGTTGAGCGATCCTCGACTTGGGACGATTGATCGGAAGATGAAGTGTAAGACGTGTATGGCGAACATGGCTGATGTCCGGGGCATTTTGGTCACCTTGAGCTTGCGAAACCTATGTTTCATATAGGTTTTATGGAACCTGTTCTTAGTATCCTTCGGTGTGTCTGCTTCAATTGCTCCAAAATTCTGGCGGATGAGGTACTTTGATTGACTTGAATTGAATTGTTAGGTTAAAAGTTTGTGTATAGTGAAATTGTCTTCTTCTTTTTTTTTTTTTGTTTAAGAAGGATTGAATTACTGATCATATATTTTTCACTACCTGGTTTGATGTTTGTGATATCAATTAAATTATAAGTGGGTAAACCATTAACATTTGGAGGTTTCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCAATTAGCCCTCTCTCTCTCACGCTTCTAAACTCCCCCTCTCACGTTCTCTATCTTCCTCACATTATTTCTGCCAAAATATCAATAATTTTCATGCTTGAAGAACTCACAAAAAAATTTTTAAGCAAAAGAAAAAGTAATCAAAACGTCAAGGCTAAGAGAGGTTTGGTGAGTGAGGTGTACGTTGAAGTGAATTGGGAGTGGTTTGGAGGAGTTTTCCGGGCAGCAACATTTAAAGTTTGAACATCGATTAAGGTATGAGTTTTCTTCTCTCTTGGATCCTTTCCCAAGAGGTTCCTTACGATTCAAACTATTCATCTCAAAACTAAGGTTGTTCCCCCGTTGCATGTCCCTGTCACTAGCTCCCTATGATCTTAGGTTGGGTATTCTTGTTGATAGAATTTAGGGATACTTGTTTGTGGTGATAATCTCGTTTCGAATATGTGTTCATGATGATGTGATTATATTTTATGTTTTTCGGAAAATATGAATGTATTTGTGCAAGATTTTGATCATGACTTTGAGTTTTTCTTTAGCATGTTAATAGATTTGAGATTACTCGTGTTTTATGTGCAATTAGAGGCTCTTAAAATCGTAATATTCGTAATATTCACATGGTTGAAAGGCTGTAAATTCTAGTCACAATAAATGATCAAATCATCCCCCTAAATTTGTCTTAAGAACATTAATGAATGTATAAGAAAAATGCTAAATTAACCCGTAAAAAAGATGTGAAAAATTATGGAGTAGTGTCCCAGAATCTGGAAATAAGTTTTAGACACATTCTGGAAAATTTGAGCAAAAAATGAATTAAAAAAAAATAGGTGAGGTCTTCAGGGATCGAACCCGAGACCTCACCAACACATGCCTTGATAAAATAATTAAAAAGGAGTGTTGAAGACGGGGCTCGAAATGGGGGCTGGGACCAGCGAAATTCGCCAAGAAAAGAAATAAAAAGGGGGCTGGGGGGAATCGAACTCGCGACCCCCAGCCACGCGCGAAAAAAAAAAGGGGGGATTAAAGAGGGAATGCTGGGGGCGGGGATCGAACCCGCGACCCCCAGCTATGCGCGGAACGAATTAAAAGGGAGAAAAGGAACGCGAGGCGTGGGAATCGATCCCACGACCTCAGCGCTGAAGGGAGGGCGCAAATAATAGCGTGAGGCTGTGGGGATTCGATCCCATGACCTCACTGCCACTCCCCTATTAAATAAAAAAAAATAGAGGGGCTGTGGGGGTTCGAACCCACCACCTCACAGCCTTCTCTTCAGCGAAAATGAGAGGAAAAATAAGGGGGCTGTGGGGGTTCGAACCCACAACCTCCCTATTCAAGCGAATTTAATTAAAAATAATAATAATAGTAAATTAAAATTCTAATTAAAGTTGGAAAATTAATTCTCTTATGTAAACATTGAGATTTAATTTAGAATTTTAATTAAAAATAGAACATTAATTCTTTTATGTAAATATTGAGATTTAAATTGGAATTCTAATTAAATTAGAAAATTATTCTTTCATGTAAATGATTGAAATTTAATTTAGAATTCTAATTAAAATAGAAAATTTATTATTTCACGAAAATGTTGAGACTTAACTTAGAGTTCTAAATTTATGAATATTAGAACTAAAATCAATGAAAAATATAAATGATATCCAAATAATTCAAAATTTGGGTTCTCGTGTCCAAACCTCCGTATTGATACATAAGTCATACGTGAGTGAAATATTCAAGAATAATGTCATCTACTTAGATCAAAAATCAAAGATCTTGGCATATATACAAGATACATAAGTCTTGTAATACATAATCTTAGAAAAACAAGAATTCACTTAACGAACTATAAATGAAGTCTCATGGCTTGTATGTATAGATATATAAGTTTAACATACGTTCAAGAATAAGTGAACCTAAGATATACGTAATGAAATGAAGAATGTGGTGACAATCATGATGTGAGGTTAATGCATATGATGAGAGCAATCTTAAATGAGCTTAAGTAAATGTTACCGATACATACTCACCAATGAGAGTGTAAGATAATGAAGAGACCAGTCTCTATGAATACTCTAATAAAAATATTGAGTTTAAAACACTTAATACTAATGATGAGATGAGAAATCATTTATTGAGCTATGATGTCTTCATACTAGAAGCAAACTTCTATGATGTATGAGTTGCATGTAATGGAACTTTATACCGAGCACCGATAGGCTAGCTATGAGTGGTGATGCCTTCTTTCGGGAAGGGCGGAGGTTCACGTAATTCTCATGAGATGAGACTGTCCGGCTTGCCGGGTATGGGTCTCCATACATCTCCTAGTCTTTGAACCTATATTGCCACTATAGGGATCTGGCGGGGTTAAATTCCCATATACGCTAGCATGTTATTGAATCGCTTTGGCCGGTGATTCCACCTCTTTTCGGTGTGGGGAAGACACTGGATTTCATGATGCTCACATGATCTATGTCGGTTAAAGTTAAAGTTCCCAATGAATGAATGAGGCCAGCCTCAAATGAATCATATAAAGAAATGAATGATACCGAAGGTGTTAGGATAGGATAATCAAGAGGTGAGCTAGATTCAGGTAATGACATTAGGTCATTCCTGATCATTGCACAGCAAACCCGATGAGAGTCTTAAACTACATCCTAGGTATAGCTGGTGTTCGCACTGGCCTATGAATGAATTGAAATGAAATACGAATGAATGAGTGAAGCAGACTCTGTGTTTGCTAAAGAAGGCTCCCTAGTTGAGGTCCCATATGTTGAGCCCTCATTTTGGAAAGTCTTAAAGTTAAGTCTATGATAATAAGGTCTCATGATATACGAATGAATAATATGAACGAAAGTATGTGTTATATGTTATGTGTTATATGAATATGTTATGTTTTGTGTGCTATACGATAATTATAATGATGCATGTCACTCTCATGGCATAACTTTCCCAATCTTAATTTGGCAAGTCCACTGACTTGACTTCCAAAAATCATGTTGTTAGGAAAGAGCTATTCTTCCTCATGCATGTCCCTGGTGTGTACTTGCATATACTCATACTTAGTACAAGTGTGTACTAATTCCATACGAACATCTACTTTTAGGTGCAGGCACAGGTGGACGCTAGAGCTACATGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTTGATGATGAACGATTACGAAATGTTAAGAATGTTCAGCAAGTATGATTAAAGAATCAAAAATTTCAAATTTTCCGCTAAAATTAATCTATGTAAAGTAAGAATGACGTAAGCAGGCTTGTCTGCGACCTCTGAGAGGTCAACGACGCCGGTCTCGTCTGGGGTCTAGATTCCGGTCGTGACATAATTTTAGCGAAAAATTTGAAACTTTTTGTTTCTTAACATGCTTACTAGACATTTTTTAGTATTTCGTAATCGTTCATCATAAACCATCTAACATTTAATTTTTTTTACTGAAAGAAATAATTCATTAAATATTAATTGTATATCGGCCAAAATAGCACCAATACAAAGTTTGAACCAAAACAGGAAGGAAACGCTAGTGGAACATGCTCCACTAGCTCAACTCTAAAACTACGCTAGAATGTAAAACAGTAACATCCTCGAAAGCATGAGGACCTACCAAACTCTGGATGAATGTTGACATCCGGATAGCTACAACAACGAACCTGTAGCTCTACCGTCCACCTGTGCCTGCACCTAAAAGTAGATGTTTGTATGGAATTAGTACACACTTGTACTAAGTATGGGTATATGCAAGCACACACCAGGGACACGCATGAGAAAGAATAGCTCTTTCCTAATGACATGATTTTTGGAAGTCAAGTTAGTGGACTTGCCAAATTGAGATTGGGAAAGTTATGCCACGAGAGTGAAATGGATCATTATAATTATCATATGGCACACAACACATAATATCTTCATATAACACATAACTTCTTTCATATTATTCATTCATATGTCATGAGACCTTGTTATCATGGACTTGACCTTAAGACTTTCCAAAATGAGGGCTCAACATATGGGACCTCAACTAGGGAGTCTTCTTTAGCAAACATAGAGTCTGCTTCATACATTCATACGTACCTCATTTCAGTTCATTCATAGGCCAGTGTGAACACCAGCTATACCTAAGATGTAGTTTAAGACTTTCATCGGGTTTGTTGTGTAATGATCAGGAATAACCTAATGTCATTACCTGAATCTAGCTCACCTCTTGATTATCCTATCCTAGCACCTTCGGTATCATTCATTTCTTTATATGACTCATTTAAGGTTGACCTCAATAATTCATTGGAAACTTTAACTTTAACCGACATAGATCATGTGAGCATCATAAAATTCAGTGTCTCCCCCACACCGAAAAGAGGTGGAATCACCGGCCAAAGTGACTCAATAACATGCTAGCGTATATGGGAATTTAACCTCGCCAGATCCCTATAGTGGCAGTATAGGTTCAAAGACTAGGAGATATATGGAGACCCATACTCGGCAAGTCGGATAGTCTTATCTCATGAGAGTTACGTAAACCTCCGCCCTTCCCGAAAGAAGGCATCACCGCTCATAGCTAGCCTATCGGTGCTCAGTATAAAGTTCCATTACATTCAACTCATACATCATGGAAGTTGACTTCTAGTATGAGGACATCATAGCTCATTAGATGATTTCTCATCTCATCAGTAGTATTAAGTGTTTTAAACTCAATATTTTCATTAGAGTGTTCATAGAGACTGGTCTCTTCATAATCTTACACTCTTATTGGTGAGTACGTATTGGTAACATTTACTTAGACCTATTTGAGATTTCTTTCATCATATACATTAGCCTCACATCATGATTGTTACCACATTCTTCATTGTTAGCACCTTTGTTTTTCATAGTTACTCACCTCTTATTACGTGAATGTTTATTTCTTCATTTCATAGTTCATTTTATCATATGCCAATGCACTTGGCCATTTAGTGTATCTTACAATCGTACTTAACCCTCCTAAGATTCATCATTTCATTACGTACATCTTAGGTTCACTTATTTTTGAACGTATGTTAGACTTATGTGTCTATACATACAAGTCATGGGGCTTCATTCATAGTTCGCTAAGTGATTCTTACTTTCCTAAGATTATGTATTACAAGACTTATGTATCTTGTATATATGTCAAGATCTTGATTTTTGATCTAAGTAGATGACATTATTTTTGAATATTTTACTCACGTATGACTTATGTATCAATATGGAGTTTTGGGCACGGGAACTCAAATCTTGAATCACTTGGATATCATTATATTTTTCATTGATTTTATTTCTAATATTCATAACATTAGAACTCTAAATTAAAGCTCATCATTTTCATGAAATAATTAATTTTCTATTTTAATTAGAATTCTAAATTAAATCTCAACATTTACATGAAGGAATTAATTTTCTATTTTAATTAGAATTCTAAATTAAATCCCAACATTTACATGAAAGAATTAATTTTCTATTTTAATTGGAATTCTAAATTAAATCTCAATATTTACATGAAAGAATGAATTTTCAATTTTAATTAGAATTCTAATTTAAATCTAAATATCTACATGAAGGGATACATTTCTGTTTTAATTTTACTATTAGCTAACCAAAAGGTTGGGGGTCGAGCCCCAACAACCCCTTTTGAGTTTTTAGAATTAAATTTGCTACAATAGGGAGGTTGTGGGTTCGAACCTCGTAGCCCCCCTTATTTTCTTTAAATTTTCGCTGAAGAGGATGAGGCTGTGAGGTGGTGGTTTCGAACCCCCACAACCTCACTTTATTTCCTTAATATTTTTGCCCCCCCCCCCTTCAGTGCTGAGGTCGTGGGTTCGATCCCCACGCCTCGCATCTTTTTTCTTTTCTTTTTGCGAACTGTGGGGTCGTGGGTTCTATCCCTGCCCCCAGCCCCCCCTTTTTTTCTTTTTTCCTTTTTTGCGAACTAGGGTGTCGTGGGTTCGATCCCCGCCCCCAGCCCCTTCCTTTTTTCTTTTTCGTGAACTGGGGGTCGTGGGTTCAATCCCCGCCTCCAACCCCTTTTTTTTTTCCTTTTTCGCGAACTGGGGGGTTGTGGGTTTGATCCCCGCCCCCAGCCCCTTCCTTTTTGTCTTTTTCGCGATCTGGGGGTCGCGGGTTCGATCCCCTCCCCCCCCCCCCCCCCCTTTTTTTTTTCCTTTTTCCCGAACTGGGGGGTCGTGGGTTCGATCCCCGCCCCCCAGCCCATTTTTTCAGTTTTTTTCACAGGTGAGGTCTTGGGTTCGATTCCCATTGACCTTAATTTATTTTGTTTTAAAAACTCAGAATTTGACACTTTTGAAGGGTACGAAAATCTGGAATTTTTTGTCCTTATCCAACCATCTTTAGGTGCTTTTTTTTCATAAGTTTAAGTAGCTATAAGATAGTTATTCAATTCACTATACTTAATCATAATGAACATCACATTGTACACCCATTACACATAAAATACACAACTTATACACCCCAAAACAGTGACTAAAACACTGCTTTTCCGGTCATATTTTGATGATCATTATCGTGATTTCCCGCACATAAACACATTCGTATTTAATTTAAATACATCATTCATGCAAAAATCTAGCAGCACAACATACCCATCCTACAAATCTGTTAGGGAGCTAAGGACAAGGACATACGATTAGGAACAACCTTAGTTTCAAGAGTATAAGAAACGTTCGAAAGAAAGTACTCTTGGAGAAAGAATTCCATGAGAGAAACCCATACCTTTATTGATGTTCAAACAAAGAATTTGCTGCCCAAAACTCTCTCCAAAAATCAGTTCAAGTTACCTCAACGTCCACACCACTCAATGAACAACTTCTCTTCGCCTTAATGTTTTTGGTTGCTTTGTTTTTCTTAAAATTTCATGTGAGTTCTTCAAGTGTGAAGAACTCTTGATGTTTTCTCTGGTTTTTGTTGTGCTTGGCAGAATAACGTGAGAGACATGGAGAACGTGAGAGAGAGAGTTAAGAAGCGTGAGAGAGAGAGAGCGCTATTAGGATTAGGAGACTAAATTCAAGATTTAGTCAAAATAGGATTTAACTAACTTAATAAAAATCTGATTTATTTTAAATTAATACGTGAAAGGACCATTATGCCCTTAAAATTTCAGATTTTCAATTAATAACTAAATCACCTTAAGTACCTATTTATTCGACTTTTTTTGAATCGTTACAGTTGCAAATGTCGTCATGCATTTTTATTTATCCCCTGTTAGAAGGGAGAGAGATGGGATGTTTTTATCTAAAGAGTAGTCAAACTCACTCCCTTTTGATTGTTTATTGAACAGTGAAAATCGGATTATAATTCATGTATAGAGTTGATTCTAAAATTAGACAGCACTTAATGGTCTTACTACAATTCCTTATGGTCTCACTGATGAATCAAGAGGGAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTGTCTCTATGCATTATTTCTGATACTCAATGCAGCTTTGGGTTGTATAATTGGATCTTTGGGTCTTTCGATTTTGTGCAGGACAATCCCAAGTTCAAACAAGCCATGAGAATCAGGAATCCTAAAAACAGGCTTAGAAAGATGTTGGATGCTTGCAAGAACAAAACAAAATGTGAAGGAGGGGATGAAGTTGATGTACA</genome_strand>
        <mrna_strand>CTGAGAGGAGACGAAAGAAGCGAAAACCAGATCTGTACTGAACAAGTGAAATTGACTGAAGAATGGAGTCTTAAAATAGAAACTTACATATAGATTAATCAAAACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATT.................................................................................AGATAAATGTCTGTGGTGCACATTGAGCATGGTGAGACTACGGAGTTGAGCGATCCTCGACTTGGGACGATTGATCGGAAGATGAAGTGTAAGACGTGTATGGCGAACATGGCTGATGTCCGGGGCATTTTGGTCACCTTGAGCTTGCGAAACCTATGTTTCATATAGGTTTTATGGAACCTGTTCTTAGTATCCTTCGGTGTGTCTGCTTCAATTGCTCCAAAATTCTGGCGGATGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCCAAGTTCAAACAAGCCATGAGAATCANGAATCCTAAAAACAGGCTTAGAAAGATGTTGGATGCTTGCAAGAACAAAACANAATGTGAAGGANGGGATGAAGTTGATGTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E223449" ref_strand="+" ref_description="SGN-E223449 [cLEL-14-I9](-)">
      <seq>tcaagggaagataggtgcaagcacaggtggacgctaaagctacaggttcgttgttgcagctatccggacatcagtattcatccggagtttggtaggtcctcatgctttcgaggatgctaccgttttacattctagcgtagttttagagttgagctagcggagcatgttccactagcgtttctttcctgttttggttcaaactttgtattggcgctattttggccgatatacaagtaatacttaatgaattatttctttcagttgcttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="84064" stop="1568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83761" g_stop="83487" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="289" r_length="275" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E223449" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83761" e_stop="83487"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAGGCACAGGTGGACGCTAGAGCTACATGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</genome_strand>
        <mrna_strand>GTGCAAGCACAGGTGGACGCTAAAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACCGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGCGCTATTTTGGCCGATATACAAGTAATACTTAATGAATTATTTCTTTCAGTTGCTTAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727667" ref_strand="+" ref_description="SGN-E727667 [LA15BE07]">
      <seq>ataccctctgttatctatcttgttcgaaaaaaaaacaaaataattattctactgtataaatttcttctgtagaggtgtaacctaggttgcgccaccatggatttgcgcttccccttctagccggcggaggttgccaaggtccggacggtccagttcggcattgtcagcgccgacgaaattagataaatgtctgtggtgcacattgagcatggtgagactacggagttgagcgatcctcgacttgggacgattgatcggaagatgaagtgtaagacgtgtatggcgaacatggctgatgtccggggcattttggtcaccttgagcttgcgaaacctatgtttcatataggttttatggaacctgttcttagtatccttcggtgtgtctgcttcaattgctccaaaattctggcggatgaggtgcaggcacaggtggacgctagagctacatgttcgttgttgcagctatccggacatcagtattcatccggagtttggtaggtcctcatgctttcgaggatgctactgttttacattctagcgtagttttagagttgagctagcggagcatgttccactagcgtttctttcctgttttggttcaaactttgtattggtgctattttggccgatatacaattaatacttaatgaattatttctttcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="88802" stop="83216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88502" g_stop="88323" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88322" i_stop="88242" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88241" g_stop="88003" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="419" r_length="239" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88002" i_stop="83762" i_length="4241">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83761" g_stop="83516" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="665" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="666" polyA_stop="676"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E727667" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88502" e_stop="88323"/>
          <exon e_start="88241" e_stop="88003"/>
          <exon e_start="83761" e_stop="83516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATTGTAATTTTCACTAATCTTGATTCATTTTGTTGAATTCTCTAGGGTTTAAATTTGATTTAGTTTTTGTTTCTTCGTTTCCAGAGATAAATGTCTGTGGTGCACATTGAGCATGGTGAGACTACGGAGTTGAGCGATCCTCGACTTGGGACGATTGATCGGAAGATGAAGTGTAAGACGTGTATGGCGAACATGGCTGATGTCCGGGGCATTTTGGTCACCTTGAGCTTGCGAAACCTATGTTTCATATAGGTTTTATGGAACCTGTTCTTAGTATCCTTCGGTGTGTCTGCTTCAATTGCTCCAAAATTCTGGCGGATGAGGTACTTTGATTGACTTGAATTGAATTGTTAGGTTAAAAGTTTGTGTATAGTGAAATTGTCTTCTTCTTTTTTTTTTTTTGTTTAAGAAGGATTGAATTACTGATCATATATTTTTCACTACCTGGTTTGATGTTTGTGATATCAATTAAATTATAAGTGGGTAAACCATTAACATTTGGAGGTTTCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCAATTAGCCCTCTCTCTCTCACGCTTCTAAACTCCCCCTCTCACGTTCTCTATCTTCCTCACATTATTTCTGCCAAAATATCAATAATTTTCATGCTTGAAGAACTCACAAAAAAATTTTTAAGCAAAAGAAAAAGTAATCAAAACGTCAAGGCTAAGAGAGGTTTGGTGAGTGAGGTGTACGTTGAAGTGAATTGGGAGTGGTTTGGAGGAGTTTTCCGGGCAGCAACATTTAAAGTTTGAACATCGATTAAGGTATGAGTTTTCTTCTCTCTTGGATCCTTTCCCAAGAGGTTCCTTACGATTCAAACTATTCATCTCAAAACTAAGGTTGTTCCCCCGTTGCATGTCCCTGTCACTAGCTCCCTATGATCTTAGGTTGGGTATTCTTGTTGATAGAATTTAGGGATACTTGTTTGTGGTGATAATCTCGTTTCGAATATGTGTTCATGATGATGTGATTATATTTTATGTTTTTCGGAAAATATGAATGTATTTGTGCAAGATTTTGATCATGACTTTGAGTTTTTCTTTAGCATGTTAATAGATTTGAGATTACTCGTGTTTTATGTGCAATTAGAGGCTCTTAAAATCGTAATATTCGTAATATTCACATGGTTGAAAGGCTGTAAATTCTAGTCACAATAAATGATCAAATCATCCCCCTAAATTTGTCTTAAGAACATTAATGAATGTATAAGAAAAATGCTAAATTAACCCGTAAAAAAGATGTGAAAAATTATGGAGTAGTGTCCCAGAATCTGGAAATAAGTTTTAGACACATTCTGGAAAATTTGAGCAAAAAATGAATTAAAAAAAAATAGGTGAGGTCTTCAGGGATCGAACCCGAGACCTCACCAACACATGCCTTGATAAAATAATTAAAAAGGAGTGTTGAAGACGGGGCTCGAAATGGGGGCTGGGACCAGCGAAATTCGCCAAGAAAAGAAATAAAAAGGGGGCTGGGGGGAATCGAACTCGCGACCCCCAGCCACGCGCGAAAAAAAAAAGGGGGGATTAAAGAGGGAATGCTGGGGGCGGGGATCGAACCCGCGACCCCCAGCTATGCGCGGAACGAATTAAAAGGGAGAAAAGGAACGCGAGGCGTGGGAATCGATCCCACGACCTCAGCGCTGAAGGGAGGGCGCAAATAATAGCGTGAGGCTGTGGGGATTCGATCCCATGACCTCACTGCCACTCCCCTATTAAATAAAAAAAAATAGAGGGGCTGTGGGGGTTCGAACCCACCACCTCACAGCCTTCTCTTCAGCGAAAATGAGAGGAAAAATAAGGGGGCTGTGGGGGTTCGAACCCACAACCTCCCTATTCAAGCGAATTTAATTAAAAATAATAATAATAGTAAATTAAAATTCTAATTAAAGTTGGAAAATTAATTCTCTTATGTAAACATTGAGATTTAATTTAGAATTTTAATTAAAAATAGAACATTAATTCTTTTATGTAAATATTGAGATTTAAATTGGAATTCTAATTAAATTAGAAAATTATTCTTTCATGTAAATGATTGAAATTTAATTTAGAATTCTAATTAAAATAGAAAATTTATTATTTCACGAAAATGTTGAGACTTAACTTAGAGTTCTAAATTTATGAATATTAGAACTAAAATCAATGAAAAATATAAATGATATCCAAATAATTCAAAATTTGGGTTCTCGTGTCCAAACCTCCGTATTGATACATAAGTCATACGTGAGTGAAATATTCAAGAATAATGTCATCTACTTAGATCAAAAATCAAAGATCTTGGCATATATACAAGATACATAAGTCTTGTAATACATAATCTTAGAAAAACAAGAATTCACTTAACGAACTATAAATGAAGTCTCATGGCTTGTATGTATAGATATATAAGTTTAACATACGTTCAAGAATAAGTGAACCTAAGATATACGTAATGAAATGAAGAATGTGGTGACAATCATGATGTGAGGTTAATGCATATGATGAGAGCAATCTTAAATGAGCTTAAGTAAATGTTACCGATACATACTCACCAATGAGAGTGTAAGATAATGAAGAGACCAGTCTCTATGAATACTCTAATAAAAATATTGAGTTTAAAACACTTAATACTAATGATGAGATGAGAAATCATTTATTGAGCTATGATGTCTTCATACTAGAAGCAAACTTCTATGATGTATGAGTTGCATGTAATGGAACTTTATACCGAGCACCGATAGGCTAGCTATGAGTGGTGATGCCTTCTTTCGGGAAGGGCGGAGGTTCACGTAATTCTCATGAGATGAGACTGTCCGGCTTGCCGGGTATGGGTCTCCATACATCTCCTAGTCTTTGAACCTATATTGCCACTATAGGGATCTGGCGGGGTTAAATTCCCATATACGCTAGCATGTTATTGAATCGCTTTGGCCGGTGATTCCACCTCTTTTCGGTGTGGGGAAGACACTGGATTTCATGATGCTCACATGATCTATGTCGGTTAAAGTTAAAGTTCCCAATGAATGAATGAGGCCAGCCTCAAATGAATCATATAAAGAAATGAATGATACCGAAGGTGTTAGGATAGGATAATCAAGAGGTGAGCTAGATTCAGGTAATGACATTAGGTCATTCCTGATCATTGCACAGCAAACCCGATGAGAGTCTTAAACTACATCCTAGGTATAGCTGGTGTTCGCACTGGCCTATGAATGAATTGAAATGAAATACGAATGAATGAGTGAAGCAGACTCTGTGTTTGCTAAAGAAGGCTCCCTAGTTGAGGTCCCATATGTTGAGCCCTCATTTTGGAAAGTCTTAAAGTTAAGTCTATGATAATAAGGTCTCATGATATACGAATGAATAATATGAACGAAAGTATGTGTTATATGTTATGTGTTATATGAATATGTTATGTTTTGTGTGCTATACGATAATTATAATGATGCATGTCACTCTCATGGCATAACTTTCCCAATCTTAATTTGGCAAGTCCACTGACTTGACTTCCAAAAATCATGTTGTTAGGAAAGAGCTATTCTTCCTCATGCATGTCCCTGGTGTGTACTTGCATATACTCATACTTAGTACAAGTGTGTACTAATTCCATACGAACATCTACTTTTAGGTGCAGGCACAGGTGGACGCTAGAGCTACATGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCA</genome_strand>
        <mrna_strand>ATACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATT.................................................................................AGATAAATGTCTGTGGTGCACATTGAGCATGGTGAGACTACGGAGTTGAGCGATCCTCGACTTGGGACGATTGATCGGAAGATGAAGTGTAAGACGTGTATGGCGAACATGGCTGATGTCCGGGGCATTTTGGTCACCTTGAGCTTGCGAAACCTATGTTTCATATAGGTTTTATGGAACCTGTTCTTAGTATCCTTCGGTGTGTCTGCTTCAATTGCTCCAAAATTCTGGCGGATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGCACAGGTGGACGCTAGAGCTACATGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227035" ref_strand="+" ref_description="SGN-E227035 [cLED-1-J20](-)">
      <seq>aaaaggagtaaggtaagtgaaaagctcaggattagaagataaatgttctgaagctcccgagtctaatatccattcactagacttgattgaaataaagagtagtcaaactcactccattttgattgtttattcaacggtgagaatcggattataatttatgtatagaggtgattctaaaattagacaacacttaatggtcttgctacatttccttacggtttcacggtttcactgatgaatgaaggggaaaaaaaacttggtctaatcttgacgtctcataaggaaggaagtggtcgtttctctatgcattatttctgatcctggaattcagaccccatatgagaccggcgtcgttgacctctcagaagtcgcaaacaagcctacttacgtcattcttactttacataggttaatttgtaacgattcaaaaaaaaagaagagaattatgtaaataagaataaataggtatttaagggcataattgtcctttcacgttttaaatgaataaataaataaataaataaaacagatttgtatttatttattttaatgttatttgactaattcttgaattagtctcctaatccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="87743" stop="86555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87443" g_stop="86856" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="589" polyA_stop="598"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E227035" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87443" e_stop="86856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCA</genome_strand>
        <mrna_strand>AAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E378094" ref_strand="+" ref_description="SGN-E378094 [TUS-21-D14](-)">
      <seq>agctccccgagtctaatatccattcactagacttgattgaaataaagagtagtcaaactcactccattttgattgtttattcaacggtgagaatcggattataatttatgtatagaggtgattctaaaattagacaacacttaatggtcttgctacatttccttacggtttcacggtttcactgatgaatgaaggggaaaaaaaacttggtctaatcttgacgtctcataaggaaggaagtggtcgtttctctatgcattatttctgatcctggaattcagaccccatatgagaccggcgtcgttgacctctcagaagtcgcaaacaagcctacttacgtcattcttactttacataggttaatttgtaacgattcaaaaaaaaagaagagaattatgtaaataagaataaataggtatttaagggcataattgtcctttcacgttttaaatgaataaataaataaataaataaaacagatttgtatttatttattttaatgttatttgactaattcttgaattagtctcctaatccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="87692" stop="86555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87392" g_stop="86856" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="539" polyA_stop="548"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E378094" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E378094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87392" e_stop="86856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCT-CCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCA</genome_strand>
        <mrna_strand>AGCTCCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392260" ref_strand="+" ref_description="SGN-E392260 [TUS-36-O2](-)">
      <seq>aatatccattcactagacttgatggaaataaagagtagtcaaactcactccattttgattgtttactcaccggtgagaatcggattataatttatgtatagaggtgattctaaaattagacaacacttaatggtcttgctacatttccttacggtttcacggtttcactgatgaatgaaggggaaaaaaaacttggtctaatctggacgtctcataaggaaggaagtggtcgtttctctatgcattatttctgatcctggaattcagaccccatatgagaccggcgtcgttgacctatcagaagtcgcaaacaagcctacttacgtcattcttactttacataggttaattagtaacgattcaaaaaaaaagaagagaattatgtaaataagaataaataggtatttaagggccacattgtcctttcacgtttacaatgaataattaaataaatcaataaaacagattagtataaatagtttttaaggttatctggctaattctggggctagtctactaatccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="87679" stop="86603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87379" g_stop="86856" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="525" polyA_stop="535"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E392260" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87379" e_stop="86856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCA</genome_strand>
        <mrna_strand>AATATCCATTCACTAGACTTGATGGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTACTCACCGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTGGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTATCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTAGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCCACATTGTCCTTTCACGTTTACAATGAATAATTAAATAAATCAATAAAACAGATTAGTATAAATAGTTTTTAAGGTTATCTGGCTAATTCTGGGGCTAGTCTACTAATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236454" ref_strand="+" ref_description="SGN-E236454 [cLED-13-N1]">
      <seq>tcaggtttgccagtggaggtctagaaacaagttttgaacaagtacaggctgaggaagttttgatagagcagtatttctctattacatcaacatgaccctttttaggagatagcttctatttacttactagttaatcaggatttggtagttcagtgaattgtatttttctggaatgttgcaaatttcgtcatgcctttttatttttcttcctgttagaagggagaaatgataaaatactctaattgcataccagtgtgaatagatggaagattcattttaaaagaaggaacataaagaactctatgaatgatcaaattagggaaaagagtagcaacacttcctatatgagtagcttttaccttcgaagaatcatgaaaaaggagtaaggtaagtgaaaagctcaggattagaagataaatgttctgaagctcccgagtctaatatccattcactagacttgattgaaataaagagtagtcaaactcactccattttgattgtttattcaacggtgagaatcggattataatttatgtatagaggtgattctaaaattagacaacacttaatggtcttgctacatttccttacggtttcacggtttcactgatgaatgaaagggaaaaaaaacttggtctaatcttgacgtctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="88118" stop="86865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87818" g_stop="87165" g_length="654"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="654" r_length="654" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E236454" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87818" e_stop="87165"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCAT</genome_strand>
        <mrna_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAAGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E378095" ref_strand="+" ref_description="SGN-E378095 [TUS-21-D14]">
      <seq>tcaggtttgccagtggaggtctagaaacaagttttgaacaagtacaggctgaggaagttttgatagagcagtatttctctattacatcaacatgaccctttttaggagatagcttctatttacttactagttaatcaggatttggtagttcagtgaattgtatttttctggaatgttgcaaatttcgtcatgcctttttatttttcttcctgttagaagggagaaatgataaaatactctaattgcataccagtgtgaatagatggaagattcattttaaaagaaggaacataaagaactctatgaatgatcaaattagggaaaagagtagcaacacttcctatatgagtagcttttaccttcgaagaatcatgaaaaaggagtaaggtaagtgaaaagctcaggattagaagataaatgttctgaagctcccgagtctaatatccattcactagacttgattgaaataaagagtagtcaaactcactccattttgattgtttattcaacggtgagaatcggattataatttatgtatagaggtgattctaaaattagacaacacttaatggtcttgctacattttcttatcgtttcacggttttactgttgaatgaaggggaaaaaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="88118" stop="86887"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87818" g_stop="87187" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E378095" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E378095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87818" e_stop="87187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACT</genome_strand>
        <mrna_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTTCTTATCGTTTCACGGTTTTACTGTTGAATGAAGGGGAAAAAAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E233379" ref_strand="+" ref_description="SGN-E233379 [cLED-9-K12]">
      <seq>tcaggtttgccagtggaggtctagaaacaagttttgaacaagtacaggctgaggaagttttgatagagcagtatttctctattacatcaacatgaccctttttaggagatagcttctatttacttactagttaatcaggatttggtagttcagtgaattgtatttttctggaatgttgcaaatttcgtcatgcctttttatttttcttcctgttagaagggagaaatgataaaatactctaattgcataccagtgtgaatagatggaagattcattttaaaagaaggaacataaagaactctatgaatgatcaaattagggaaaagagtagcaacacttcctatatgagtagcttttaccttcgaagaatcatgaaaaaggagtaaggtaagtgaaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="88118" stop="87118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87818" g_stop="87418" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E233379" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87818" e_stop="87418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCT</genome_strand>
        <mrna_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E227034" ref_strand="+" ref_description="SGN-E227034 [cLED-1-J20]">
      <seq>tcaggtttgccagtggaggtctagaaacaagttttgaacaagtacaggctgaggaagttttgatagagcagtatttctctattacatcaacatgaccctttttaggagatagcttctatttacttactagttaatcaggatttggtagttcagtgaattgtatttttctggaatgttgcaaatttcgtcatgcctttttatttttcttcctgttagaagggagaaatgataaaatactctaattgcataccagtgtgaatagatggaagattcattttaaaagaaggaacataaagaactctatgaatgatcaaattagggaaaagagtagcaacacttcctatatgagtagcttttaccttcgaagaatcatgaaaaaggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="88118" stop="87135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87818" g_stop="87435" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E227034" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87818" e_stop="87435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGT</genome_strand>
        <mrna_strand>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354129" ref_strand="+" ref_description="SGN-E354129 [cTOS-16-D12]">
      <seq>aattttggagcaattgaagcagacacaccgaaggatactaagaacaggttccataaaacctatatgaaacataggtttcgcaagctcaaggtgaccaaaatgccccggacatcagccatgttcgccatacacgtcttacacttcatcttccgatcaatcgtcccaagtcgaggatcgctcaactccgtagtctcaccatgctcaatgtgcaccacagacatttatctctggaaacgaagaaacaaaaactaaatcaaatttaaaccctagagaattcaacaaaatgaatcaagattagtgaaaattacaatttcgtcggcgctgacaatgccgaactggaccgtccggaccttggcaacctccgccggctagaaggggaagcgcaaatccatggtggcgcaacctaagttacacctctacagaagaaatttatacagtagaataattattttgttttttttttcgacaagatagataacagagggttttgattaatctatatgtaaggttctattttaagactcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="87715" stop="88840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88015" g_stop="88548" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E354129" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88015" e_stop="88548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGGAGCAATTGAAGCAGACACACCGAAGGATACTAAGAACAGGTTCCATAAAACCTATATGAAACATAGGTTTCGCAAGCTCAAGGTGACCAAAATGCCCCGGACATCAGCCATGTTCGCCATACACGTCTTACACTTCATCTTCCGATCAATCGTCCCAAGTCGAGGATCGCTCAACTCCGTAGTCTCACCATGCTCAATGTGCACCACAGACATTTATCTCTGGAAACGAAGAAACAAAAACTAAATCAAATTTAAACCCTAGAGAATTCAACAAAATGAATCAAGATTAGTGAAAATTACAATTTCGTCGGCGCTGACAATGCCGAACTGGACCGTCCGGACCTTGGCAACCTCCGCCGGCTAGAAGGGGAAGCGCAAATCCATGGTGGCGCAACCTAGGTTACACCTCTACAGAAGAAATTTATACAGTAGAATAATTATTTTGTTTTTTTTTCGAACAAGATAGATAACAGAGGGTTTTGATTAATCTATATGTAAGTTTCTATTTTAAGACTCCATTCTTCAG</genome_strand>
        <mrna_strand>AATTTTGGAGCAATTGAAGCAGACACACCGAAGGATACTAAGAACAGGTTCCATAAAACCTATATGAAACATAGGTTTCGCAAGCTCAAGGTGACCAAAATGCCCCGGACATCAGCCATGTTCGCCATACACGTCTTACACTTCATCTTCCGATCAATCGTCCCAAGTCGAGGATCGCTCAACTCCGTAGTCTCACCATGCTCAATGTGCACCACAGACATTTATCTCTGGAAACGAAGAAACAAAAACTAAATCAAATTTAAACCCTAGAGAATTCAACAAAATGAATCAAGATTAGTGAAAATTACAATTTCGTCGGCGCTGACAATGCCGAACTGGACCGTCCGGACCTTGGCAACCTCCGCCGGCTAGAAGGGGAAGCGCAAATCCATGGTGGCGCAACCTAAGTTACACCTCTACAGAAGAAATTTATACAGTAGAATAATTATTTTGTTTTTTTTTTCGACAAGATAGATAACAGAGGGTTTTGATTAATCTATATGTAAGGTTCTATTTTAAGACTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349170" ref_strand="+" ref_description="SGN-E349170 [cTOS-2-A4]">
      <seq>aattttggagcaattgaagcagacacaccgaaggatactaagaacaggttccataaaacctatatgaaacataggtttcgcaagctcaaggtgaccaaaatgccccggacatcagccatgttcgccatacacgtcttacacttcatcttccgatcaatcgtcccaagtcgaggatcgctcaactccgtagtctcaccatgctcaatgtgcaccacagacatttatctctggaaacgaagaaacaaaaactaaatcaaatttaaaccctagagaattcaacaaaatgaatcaagattagtgaaaattacaatttcgtcggcgctgacaatgccgaactggaccgtccggaccttggcaacctccgccggctagaaggggaagcgcaaatccatggtggcgcaacctaggttacacctctacagaagaaatttatacagtagaataattattttgtttttttttcgaacaagatagataacagagggttttgattaatctatatgtaagtttctattttaagactcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="87715" stop="88840"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88015" g_stop="88548" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E349170" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88015" e_stop="88548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGGAGCAATTGAAGCAGACACACCGAAGGATACTAAGAACAGGTTCCATAAAACCTATATGAAACATAGGTTTCGCAAGCTCAAGGTGACCAAAATGCCCCGGACATCAGCCATGTTCGCCATACACGTCTTACACTTCATCTTCCGATCAATCGTCCCAAGTCGAGGATCGCTCAACTCCGTAGTCTCACCATGCTCAATGTGCACCACAGACATTTATCTCTGGAAACGAAGAAACAAAAACTAAATCAAATTTAAACCCTAGAGAATTCAACAAAATGAATCAAGATTAGTGAAAATTACAATTTCGTCGGCGCTGACAATGCCGAACTGGACCGTCCGGACCTTGGCAACCTCCGCCGGCTAGAAGGGGAAGCGCAAATCCATGGTGGCGCAACCTAGGTTACACCTCTACAGAAGAAATTTATACAGTAGAATAATTATTTTGTTTTTTTTTCGAACAAGATAGATAACAGAGGGTTTTGATTAATCTATATGTAAGTTTCTATTTTAAGACTCCATTCTTCAG</genome_strand>
        <mrna_strand>AATTTTGGAGCAATTGAAGCAGACACACCGAAGGATACTAAGAACAGGTTCCATAAAACCTATATGAAACATAGGTTTCGCAAGCTCAAGGTGACCAAAATGCCCCGGACATCAGCCATGTTCGCCATACACGTCTTACACTTCATCTTCCGATCAATCGTCCCAAGTCGAGGATCGCTCAACTCCGTAGTCTCACCATGCTCAATGTGCACCACAGACATTTATCTCTGGAAACGAAGAAACAAAAACTAAATCAAATTTAAACCCTAGAGAATTCAACAAAATGAATCAAGATTAGTGAAAATTACAATTTCGTCGGCGCTGACAATGCCGAACTGGACCGTCCGGACCTTGGCAACCTCCGCCGGCTAGAAGGGGAAGCGCAAATCCATGGTGGCGCAACCTAGGTTACACCTCTACAGAAGAAATTTATACAGTAGAATAATTATTTTGTTTTTTTTTCGAACAAGATAGATAACAGAGGGTTTTGATTAATCTATATGTAAGTTTCTATTTTAAGACTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352610" ref_strand="+" ref_description="SGN-E352610 [cTOS-9-N8]">
      <seq>aattttggagcaattgaagcagacacaccgaaggatactaagaacaggttccataaaacctatatgaaacataggtttcgcaagctcaaggtgaccaaaatgccccggacatcagccatgttcgccatacacgtcttacacttcatcttccgatcaatcgtcccaagtcgaggatcgctcaactccgtagtctcaccatgctcaatgtgcaccacagacatttatctctggaaacgaagaaacaaaaactaaatcaaatttaaaccctagagaattcaacaaaatgaatcaagattagtgaaaattacaatttcgtcggcgctgacaatgccgaactggaccgtccggaccttggcaacctccgccggctagaaggggaagcgcaaatccatggtggcgcaacctaggttacacctctacagaagaaatttatacagtagaataattattttgtttttttttcgaacaagatagataacagagggttttgattaatctatatgtaagtttctattttaagact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="87715" stop="88837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88015" g_stop="88537" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="523" r_length="523" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E352610" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88015" e_stop="88537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGGAGCAATTGAAGCAGACACACCGAAGGATACTAAGAACAGGTTCCATAAAACCTATATGAAACATAGGTTTCGCAAGCTCAAGGTGACCAAAATGCCCCGGACATCAGCCATGTTCGCCATACACGTCTTACACTTCATCTTCCGATCAATCGTCCCAAGTCGAGGATCGCTCAACTCCGTAGTCTCACCATGCTCAATGTGCACCACAGACATTTATCTCTGGAAACGAAGAAACAAAAACTAAATCAAATTTAAACCCTAGAGAATTCAACAAAATGAATCAAGATTAGTGAAAATTACAATTTCGTCGGCGCTGACAATGCCGAACTGGACCGTCCGGACCTTGGCAACCTCCGCCGGCTAGAAGGGGAAGCGCAAATCCATGGTGGCGCAACCTAGGTTACACCTCTACAGAAGAAATTTATACAGTAGAATAATTATTTTGTTTTTTTTTCGAACAAGATAGATAACAGAGGGTTTTGATTAATCTATATGTAAGTTTCTATTTTAAGACT</genome_strand>
        <mrna_strand>AATTTTGGAGCAATTGAAGCAGACACACCGAAGGATACTAAGAACAGGTTCCATAAAACCTATATGAAACATAGGTTTCGCAAGCTCAAGGTGACCAAAATGCCCCGGACATCAGCCATGTTCGCCATACACGTCTTACACTTCATCTTCCGATCAATCGTCCCAAGTCGAGGATCGCTCAACTCCGTAGTCTCACCATGCTCAATGTGCACCACAGACATTTATCTCTGGAAACGAAGAAACAAAAACTAAATCAAATTTAAACCCTAGAGAATTCAACAAAATGAATCAAGATTAGTGAAAATTACAATTTCGTCGGCGCTGACAATGCCGAACTGGACCGTCCGGACCTTGGCAACCTCCGCCGGCTAGAAGGGGAAGCGCAAATCCATGGTGGCGCAACCTAGGTTACACCTCTACAGAAGAAATTTATACAGTAGAATAATTATTTTGTTTTTTTTTCGAACAAGATAGATAACAGAGGGTTTTGATTAATCTATATGTAAGTTTCTATTTTAAGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323903" ref_strand="+" ref_description="SGN-E323903 [cTOC-3-G15]">
      <seq>acgaaagaagcgaaaaccagatctgtactgaacaagtgaaattgactgaagaatggagtcttaaaatagaaacttacatatagattaatcaaaaccctctgttatctatcttgttcgaaaaaaaaacaaaataattattctactgtataaatttcttctgtagaggtgtaacctaggttgcgccaccatggatttgcgcttccccttctagccggcggaggttgccaaggtccggacggtccagttcggcattgtcagcgccgacgaaattagataaatgtctgtggtgcacattgagcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="88893" stop="87912"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88593" g_stop="88323" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88322" i_stop="88242" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88241" g_stop="88212" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="301" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E323903" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323903" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88593" e_stop="88323"/>
          <exon e_start="88241" e_stop="88212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAAAGAAGCGAAAACCAGATCTGTACTGAACAAGTGAAATTGACTGAAGAATGGAGTCTTAAAATAGAAACTTACATATAGATTAATCAAAACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATTGTAATTTTCACTAATCTTGATTCATTTTGTTGAATTCTCTAGGGTTTAAATTTGATTTAGTTTTTGTTTCTTCGTTTCCAGAGATAAATGTCTGTGGTGCACATTGAGCAT</genome_strand>
        <mrna_strand>ACGAAAGAAGCGAAAACCAGATCTGTACTGAACAAGTGAAATTGACTGAAGAATGGAGTCTTAAAATAGAAACTTACATATAGATTAATCAAAACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATT.................................................................................AGATAAATGTCTGTGGTGCACATTGAGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E225402" ref_strand="+" ref_description="SGN-E225402 [cLEL-17-G23](-)">
      <seq>agattcagagtgtataaatatgaggaagaggagcattattggaagcaagtcacaaacttgaatgaccaagtcatatttgttggagatgatgcatcgtattggtcctactgtgtgtctgctaaagattttccagggtgcagaggaaatttagtttacttcatagatcaattcaggaaagctggggatggagatctcccatgatttttgggatgcgctaaaacatgaaaatggctattcacttgggggatttgacatggagaacgcgtttattgggccaatggcatgtttccccggttacactgattttttctggccacctcctagctggctcaactgagattttctctccaatgacatttactcctatgatccattttatgtgttagtcaaaatattatgtgaaaagtattgtatgtcactgctttttcagtaaattctagacaaaagtcattttcgtttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="98479" stop="97419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98179" g_stop="97719" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="462" polyA_stop="476"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E225402" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E225402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98179" e_stop="97719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTCAGAGTGTATAAATTTGAGGAAGAGGAGCATTATTGGAAGGAAGTTACAAACTTGAATGACCAAGTCATATTTGTTGGAGATGATGCATCGTATTGGTCCTACTGTGTGTCTGCTAAAGATTTTCCAGGGTGCAGAGGAAATTTAGTTTACTTCATAGATCAATTCAGGAAAGCTGGGGATGGAGATCT-CCATGATTTTTGGGATGCGCTAAAACATGAAAATGACTATTCACTTGGGGGATTTGACATGGAGAACGCGTTTATTGGGCCAATGGCATGTTTCCCCGGTTACACTGATTTTTTCTGGCCACCTCCTAGCTGGCTCAACTGAGATTTTCTCTCCAATGACATTTACTCCTATGATCCATTTTATGTGTTAGTCAAAAATATTATGTGAAAAGTATTGTATGTCACTGCTTTTTCAGTAAATTCTAGACAAAAGTCATTTTCGTTTAA</genome_strand>
        <mrna_strand>AGATTCAGAGTGTATAAATATGAGGAAGAGGAGCATTATTGGAAGCAAGTCACAAACTTGAATGACCAAGTCATATTTGTTGGAGATGATGCATCGTATTGGTCCTACTGTGTGTCTGCTAAAGATTTTCCAGGGTGCAGAGGAAATTTAGTTTACTTCATAGATCAATTCAGGAAAGCTGGGGATGGAGATCTCCCATGATTTTTGGGATGCGCTAAAACATGAAAATGGCTATTCACTTGGGGGATTTGACATGGAGAACGCGTTTATTGGGCCAATGGCATGTTTCCCCGGTTACACTGATTTTTTCTGGCCACCTCCTAGCTGGCTCAACTGAGATTTTCTCTCCAATGACATTTACTCCTATGATCCATTTTATGTGTTAGTC-AAAATATTATGTGAAAAGTATTGTATGTCACTGCTTTTTCAGTAAATTCTAGACAAAAGTCATTTTCGTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E222116" ref_strand="+" ref_description="SGN-E222116 [cLEL-36-G2](-)">
      <seq>gtcatatttgttggagatgatgcatcgtattggtccacctgtgtgtctgctaaagattttccagggtgcagaggaaatttagtttacttcatagatcaattcaggaaagctggggatggagatctccatgatttttgggatgcgctaaaacatgaaaatgactattcacttgggggatttgacatggagaacgcgtttattgggccaatggcatgtttccccggttacactgattttttctggccacctcctagctggctcaactgagattttctctccaatgacatttactcctatgatccattttatgtgttagtcaaaatattatgtgaaaagtattgtatgtcactgctttttcagtaaattctagacaaaagtcattttcgtttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="98410" stop="97419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98110" g_stop="97719" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="391" r_length="391" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="392" polyA_stop="405"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E222116" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98110" e_stop="97719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATATTTGTTGGAGATGATGCATCGTATTGGTCCTACTGTGTGTCTGCTAAAGATTTTCCAGGGTGCAGAGGAAATTTAGTTTACTTCATAGATCAATTCAGGAAAGCTGGGGATGGAGATCTCCATGATTTTTGGGATGCGCTAAAACATGAAAATGACTATTCACTTGGGGGATTTGACATGGAGAACGCGTTTATTGGGCCAATGGCATGTTTCCCCGGTTACACTGATTTTTTCTGGCCACCTCCTAGCTGGCTCAACTGAGATTTTCTCTCCAATGACATTTACTCCTATGATCCATTTTATGTGTTAGTCAAAAATATTATGTGAAAAGTATTGTATGTCACTGCTTTTTCAGTAAATTCTAGACAAAAGTCATTTTCGTTTAA</genome_strand>
        <mrna_strand>GTCATATTTGTTGGAGATGATGCATCGTATTGGTCCACCTGTGTGTCTGCTAAAGATTTTCCAGGGTGCAGAGGAAATTTAGTTTACTTCATAGATCAATTCAGGAAAGCTGGGGATGGAGATCTCCATGATTTTTGGGATGCGCTAAAACATGAAAATGACTATTCACTTGGGGGATTTGACATGGAGAACGCGTTTATTGGGCCAATGGCATGTTTCCCCGGTTACACTGATTTTTTCTGGCCACCTCCTAGCTGGCTCAACTGAGATTTTCTCTCCAATGACATTTACTCCTATGATCCATTTTATGTGTTAGTC-AAAATATTATGTGAAAAGTATTGTATGTCACTGCTTTTTCAGTAAATTCTAGACAAAAGTCATTTTCGTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E225263" ref_strand="+" ref_description="SGN-E225263 [cLEL-17-G23](-)">
      <seq>gttggagatgatgcatcgtattggtcctactgtgtgtctgctaaaaattttccagggtgcagaggaaatttagtttacttcatagatcaattcaggaaagctggggatggagatctccatgatttttgggatgcgctaaaacatgaaaatgactattcacttgggggatttgacatggagaacgcgtttattgggccaaaggcatgtttccccggttacactgattttttctggccacctcctagctggctcaactgagattttctctccaatgacatttactcctatgatccattttatgtgttagtcaaaatattatgtgaaaagtattgtatgtcactgctttttcagtaaattctagacaaaagtcattttcgtttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="98401" stop="97419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98101" g_stop="97719" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="383" polyA_stop="397"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E225263" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E225263" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98101" e_stop="97719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGAGATGATGCATCGTATTGGTCCTACTGTGTGTCTGCTAAAGATTTTCCAGGGTGCAGAGGAAATTTAGTTTACTTCATAGATCAATTCAGGAAAGCTGGGGATGGAGATCTCCATGATTTTTGGGATGCGCTAAAACATGAAAATGACTATTCACTTGGGGGATTTGACATGGAGAACGCGTTTATTGGGCCAATGGCATGTTTCCCCGGTTACACTGATTTTTTCTGGCCACCTCCTAGCTGGCTCAACTGAGATTTTCTCTCCAATGACATTTACTCCTATGATCCATTTTATGTGTTAGTCAAAAATATTATGTGAAAAGTATTGTATGTCACTGCTTTTTCAGTAAATTCTAGACAAAAGTCATTTTCGTTTAA</genome_strand>
        <mrna_strand>GTTGGAGATGATGCATCGTATTGGTCCTACTGTGTGTCTGCTAAAAATTTTCCAGGGTGCAGAGGAAATTTAGTTTACTTCATAGATCAATTCAGGAAAGCTGGGGATGGAGATCTCCATGATTTTTGGGATGCGCTAAAACATGAAAATGACTATTCACTTGGGGGATTTGACATGGAGAACGCGTTTATTGGGCCAAAGGCATGTTTCCCCGGTTACACTGATTTTTTCTGGCCACCTCCTAGCTGGCTCAACTGAGATTTTCTCTCCAATGACATTTACTCCTATGATCCATTTTATGTGTTAGTC-AAAATATTATGTGAAAAGTATTGTATGTCACTGCTTTTTCAGTAAATTCTAGACAAAAGTCATTTTCGTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320275" ref_strand="+" ref_description="SGN-E320275 [cTOB-21-L1]">
      <seq>ttacgactaaactgcagttttggtgaagatgaaagagaagaagatgaagaagctgtattcttggcccatatgggctgatcttcctgaagaactacttgttaagatcagtaagtgcctcaaatattcatttcaagttggtcattttcgtgctgtttgtacctcttggagatccgcagttccattatttccccttcataaaagactctccattgtccctaaatacattggcagtaaaaagcctcaaagtaaatgcatgaataggttcgttttccggcttgatcttcaacaacttccatcaccatcaccgtcacccaccagttatttgatagctgtggcggaacaattcgacggagacggccaaagccaactccacctattgaaccctgtcactggaagtcctattcctatctcctcatcaccatcaaacttgttgtttccaagagagattaatttgaacaaatttcgcgtctctatactgcataaatcttccttgatgtttcatccacacacaaatcgctatcttattggtaaagttgtttatctttccactctccgacaatcctctgacggacgtattccgaaagcagctgctgttcttggaagtggaaangtgtctttgtttacaattaatacgagagagagagttatcttaaattatgtgatggatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="99476" stop="98208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99176" g_stop="98508" g_length="669"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="669" r_length="669" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E320275" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99176" e_stop="98508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACGACTAAACTGCAGTTTTGGTGAAGATGAAAGAGAAGAAGATGAAGAAGCTGTATTCTTGGCCCATATGGGCTGATCTTCCTGAAGAACTACTTGTTAAGATCAGTAAGTGCCTCAAATATTCATTTCAAGTTGGTCATTTTCGTGCTGTTTGTACCTCTTGGAGATCCGCAGTTCCATTATTTCCCCTTCATAAAAGACTCTCCATTGTCCCTAAATACATTGGCAGTAAAAAGCCTCAAAGTAAATGCATGAATAGGTTCGTTTTCCGGCTTGATCTTCAACAACTTCCATCACCATCACCGTCACCCACCAGTTATTTGATAGCTGTGGCGGAACAATTCAACGGAGACGGCCAAAGCCAACTCCACCTATTGAACCCTGTCACTGGAAGTCCTATTCCTATCTCCTCATCACCATCAAACTTGTTGTTTCCAAGAGAGATTAATTTGAACAAATTTCGCGTCTCTATACTGCATAAATCTTCCTTGATGTTTCATCCACACACAAATCGCTATCTTATTGGTAAAGTTGTTTATCTTTCCACTCTCCGACAATCCTCTGACGGACGTATTCCGAAAGCAGCTGCTGTTCTTGGAAGTGGAAAGGTGTCTTTGTTTACAATTAATACAAGAGAGAGAGTTATCTTAAATTATTTGATGGATGG</genome_strand>
        <mrna_strand>TTACGACTAAACTGCAGTTTTGGTGAAGATGAAAGAGAAGAAGATGAAGAAGCTGTATTCTTGGCCCATATGGGCTGATCTTCCTGAAGAACTACTTGTTAAGATCAGTAAGTGCCTCAAATATTCATTTCAAGTTGGTCATTTTCGTGCTGTTTGTACCTCTTGGAGATCCGCAGTTCCATTATTTCCCCTTCATAAAAGACTCTCCATTGTCCCTAAATACATTGGCAGTAAAAAGCCTCAAAGTAAATGCATGAATAGGTTCGTTTTCCGGCTTGATCTTCAACAACTTCCATCACCATCACCGTCACCCACCAGTTATTTGATAGCTGTGGCGGAACAATTCGACGGAGACGGCCAAAGCCAACTCCACCTATTGAACCCTGTCACTGGAAGTCCTATTCCTATCTCCTCATCACCATCAAACTTGTTGTTTCCAAGAGAGATTAATTTGAACAAATTTCGCGTCTCTATACTGCATAAATCTTCCTTGATGTTTCATCCACACACAAATCGCTATCTTATTGGTAAAGTTGTTTATCTTTCCACTCTCCGACAATCCTCTGACGGACGTATTCCGAAAGCAGCTGCTGTTCTTGGAAGTGGAAANGTGTCTTTGTTTACAATTAATACGAGAGAGAGAGTTATCTTAAATTATGTGATGGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E320053" ref_strand="+" ref_description="SGN-E320053 [cTOB-21-M1]">
      <seq>ttacgactaaactgcagttttggtgaagatgaaagagaatatttgaccaagctgtattcttggcccatatgggctgatcttcctgaagaactacttgttaagatcagtaagtgcctcaaatattcatttcaagttggtcattttcgtgctgtttgtacctcttggagatccgcagttccattatttccccttcataaaagactctccattgtccctaaatacattggcagtaaaaagcctcaaagtaaatgcatgaataggttcgttttccggcttgatcttcaacaacttccatcaccatcaccgtcacccaccagttatttgatagctgtggcggaacaattcaacggagacggccaaagccaactccacctattgaaccctgtcactggaagtcctattcctatctcctcatcaccatcaaacttgttgtttccaagagagattaatttgaacaaatttcgcgtctctatactgcataaatcttccttgatgtttcatcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="99476" stop="98372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99176" g_stop="98672" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="504" r_length="504" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E320053" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E320053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99176" e_stop="98672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACGACTAAACTGCAGTTTTGGTGAAGATGAAAGAGAAGAAGATGAAGAAGCTGTATTCTTGGCCCATATGGGCTGATCTTCCTGAAGAACTACTTGTTAAGATCAGTAAGTGCCTCAAATATTCATTTCAAGTTGGTCATTTTCGTGCTGTTTGTACCTCTTGGAGATCCGCAGTTCCATTATTTCCCCTTCATAAAAGACTCTCCATTGTCCCTAAATACATTGGCAGTAAAAAGCCTCAAAGTAAATGCATGAATAGGTTCGTTTTCCGGCTTGATCTTCAACAACTTCCATCACCATCACCGTCACCCACCAGTTATTTGATAGCTGTGGCGGAACAATTCAACGGAGACGGCCAAAGCCAACTCCACCTATTGAACCCTGTCACTGGAAGTCCTATTCCTATCTCCTCATCACCATCAAACTTGTTGTTTCCAAGAGAGATTAATTTGAACAAATTTCGCGTCTCTATACTGCATAAATCTTCCTTGATGTTTCATCCA</genome_strand>
        <mrna_strand>TTACGACTAAACTGCAGTTTTGGTGAAGATGAAAGAGAA-TATTTGACCAAGCTGTATTCTTGGCCCATATGGGCTGATCTTCCTGAAGAACTACTTGTTAAGATCAGTAAGTGCCTCAAATATTCATTTCAAGTTGGTCATTTTCGTGCTGTTTGTACCTCTTGGAGATCCGCAGTTCCATTATTTCCCCTTCATAAAAGACTCTCCATTGTCCCTAAATACATTGGCAGTAAAAAGCCTCAAAGTAAATGCATGAATAGGTTCGTTTTCCGGCTTGATCTTCAACAACTTCCATCACCATCACCGTCACCCACCAGTTATTTGATAGCTGTGGCGGAACAATTCAACGGAGACGGCCAAAGCCAACTCCACCTATTGAACCCTGTCACTGGAAGTCCTATTCCTATCTCCTCATCACCATCAAACTTGTTGTTTCCAAGAGAGATTAATTTGAACAAATTTCGCGTCTCTATACTGCATAAATCTTCCTTGATGTTTCATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E285370" ref_strand="+" ref_description="SGN-E285370 [cLER-20-L15]">
      <seq>aagtgccctaatcagttaatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101909" stop="103447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102209" g_stop="102310" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="197" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="374" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103147" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="521" r_length="147" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E285370" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102209" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTGCCCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAA</genome_strand>
        <mrna_strand>AAGTGCCCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710944" ref_strand="+" ref_description="SGN-E710944 [FA57BH12]">
      <seq>ccctaatcagttaatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101914" stop="104043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102214" g_stop="102310" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="192" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="369" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="565" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103552" g_stop="103743" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="757" r_length="192" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E710944" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102214" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103743"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGC</genome_strand>
        <mrna_strand>CCCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E620835" ref_strand="+" ref_description="SGN-E620835 [71541]">
      <seq>cctaattggcaaatctgaacagaaccccaattccaaatctctcatcttcatctgctcactgtcactgttgcctcactgccggcggtggagtctccggtaaaaaaaattccgatctcattctcatcttctctgctcctatttattccgttcatgaataatttctacgttcgtttttgatgctcgtatttttctttagcagaaaaatttagtgaattctttacagattaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtattgacaagtctggttcctttaactatgataatagatttagaggagctactgctaagcctgctcctctacttaagcaagacagggagcttgcaaaggatggtttctctgttaattgtgctcgtgtattagtcggttcaggccgtgagacttttgagaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctccaattcaaagtgggacaaagttctgtgtttgcgtgaaggagttcttcccgtggcttatgatgcctctgcaggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101915" stop="103414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102215" g_stop="102508" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.982" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="471" r_length="177" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103001" g_stop="103115" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="586" r_length="115" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E620835" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E620835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102215" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTT</genome_strand>
        <mrna_strand>CCTAATTGGCAAATCTGAACAGAACCCCAATTCCAAATCTCTCATCTTCATCTGCTCACTGTCACTGTTGCCTCACTGCCGGCGGTGGAGTCTCCGGTAAAAAAAATTCCGATCTCATTCTCATCTTCTCTGCTCCTATTTATTCCGTTCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGATTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATTGACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAATAGATTTAGAGGAGCTACTGCTAAGCCTGCTCCTCTACTTAAGCAAGACAGGGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGTGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAGAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCCAATTCAAAGTGGGACAAAGTTCTGTGTTTGCGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTGCAGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325274" ref_strand="+" ref_description="SGN-E325274 [cTOC-1-O24]">
      <seq>ttaatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagctagcaaaggatggtttctctgttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101924" stop="103153"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102224" g_stop="102310" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102437" i_length="127">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102438" g_stop="102622" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="272" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102623" i_stop="102748" i_length="126">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102853" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="377" r_length="105" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E325274" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102224" e_stop="102310"/>
          <exon e_start="102438" e_stop="102622"/>
          <exon e_start="102749" e_stop="102853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAA</genome_strand>
        <mrna_strand>TTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG...............................................................................................................................GTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTAC..............................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTAGCAAAGGATGGTTTCTCTGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E257548" ref_strand="+" ref_description="SGN-E257548 [cLEG-45-E10]">
      <seq>taatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggtaaagatttttccgatctcatactcctcttctctgctcctatttattccaatcatgaataatttctacgttcgtttttgatgctcgtatttttctttagcagaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtatgtttattttaagattaaactctgtgtcaactcaacaaattgaaatagaatgagtaatttatttatttccctttctattggtttaattgtgggaatcattattgagggtttcgtctgtaacaggtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101925" stop="103226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102225" g_stop="102925" g_length="701"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="701" r_length="701" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103001" g_stop="103006" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="702" r_stop="707" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E257548" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102225" e_stop="102925"/>
          <exon e_start="103001" e_stop="103006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTT</genome_strand>
        <mrna_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375540" ref_strand="+" ref_description="SGN-E375540 [TUS-34-F6]">
      <seq>taatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggtaaagatttttccgatctcatactcctcttctctgctcctatttattccaatcatgaataatttctacgttcgtttttgatgctcgtatttttctttagcagaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtatgtttattttaagattaaactctgtgtcaactcaacaaattgaaatagaatgagtaatttatttatttccctttctattggtttaattgtgggaatcattattgagggtttcgtctgtaacaggtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101925" stop="103208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102225" g_stop="102908" g_length="684"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="684" r_length="684" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E375540" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102225" e_stop="102908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCT</genome_strand>
        <mrna_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E254389" ref_strand="+" ref_description="SGN-E254389 [cLEG-27-C10]">
      <seq>taatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggtaaagatttttccgatctcatactcctcttctctgctcctatttattccaatcatgaataatttctacgttcgtttttgatgctcgtatttttctttagcagaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtatgtttattttaagattaaactctgtgtcaactcaacaaattgaaatagaatgagtaatttatttatttccctttctattggtttaattgtgggaatcattattgagggtttcgtctgtaacaggtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgctaattgtgctcgagtattagtcggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101925" stop="103175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102225" g_stop="102875" g_length="651"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="651" r_length="651" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E254389" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102225" e_stop="102875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGT</genome_strand>
        <mrna_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGCTAATTGTGCTCGAGTATTAGTCGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276515" ref_strand="+" ref_description="SGN-E276515 [cLEN-17-I23]">
      <seq>taatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtatgtttattttaagattaaactctgtgtcaactcaacaaattgaaatagaatgagtaatttatttatttccctttctattggtttaattgtgggaatcattattgagggtttcgtctgtaacaggtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101925" stop="103148"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102225" g_stop="102310" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102848" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="521" r_length="435" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E276515" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276515" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102225" e_stop="102310"/>
          <exon e_start="102414" e_stop="102848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCT</genome_strand>
        <mrna_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E256202" ref_strand="+" ref_description="SGN-E256202 [cLEG-37-K4]">
      <seq>taatcagtacagaaccccaattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggtaaagatttttccgatctcatactcctcttctctgctcctatttattccaatcatgaataatttctacgttcgtttttgatgctcgtatttttctttagcagaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtatgtttattttaagattaaactctgtgtcaactcaacaaattgaaatagaatgagtaatttatttatttccctttctattggtttaattgtgggaatcattattgagggtttcgtctgtaacaagtctggttcctttaactatgataaaagatttagaggaactact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101925" stop="103091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102225" g_stop="102791" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E256202" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256202" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102225" e_stop="102791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACT</genome_strand>
        <mrna_strand>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAAGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E439049" ref_strand="+" ref_description="SGN-E439049 [cSTA-10-P21]">
      <seq>cagaacccaattccaaatctctcatcttcatctgctcactgtcactgttgcctcactgccggcggtggagtctccgaaaaatttagtgaattctttaccagattaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagccatgtatcaacaagtctggttcctttaacctatgataatagatttagaggagctactgataaacctgctcctctacttaagcaagaacagggagcttgcaaaggatggtttctctgttaattgtgctcgtgtattagtcggttcaggccgtgagacttttgagaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctccaattcaaagtgggacaaagttctgtgtttgcgtgaaggagttcttcccgtggcttatgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101934" stop="103404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102234" g_stop="102310" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="173" r_length="97" r_score="0.947"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.982" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="352" r_length="179" r_score="0.944"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103104" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="456" r_length="104" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E439049" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E439049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102234" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTA-CAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAG-CATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAA-CTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAG-ACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGC</genome_strand>
        <mrna_strand>CAGAA-CCCAATTCCAAATCTCTCATCTTCATCTGCTCACTGTCACTGTTGCCTCACTGCCGGCGGTGGAGTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACCAGATTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACCTATGATAATAGATTTAGAGGAGCTACTGATAAACCTGCTCCTCTACTTAAGCAAGAACAGGGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGTGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAGAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCCAATTCAAAGTGGGACAAAGTTCTGTGTTTGCGTGAAGGAGTTCTTCCCGTGGCTTATGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369872" ref_strand="+" ref_description="SGN-E369872 [TUS-26-F21]">
      <seq>caattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101942" stop="104035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102242" g_stop="102310" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="164" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="341" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="537" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103552" g_stop="103735" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="720" r_length="183" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E369872" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102242" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACA</genome_strand>
        <mrna_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTT-AAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E298929" ref_strand="+" ref_description="SGN-E298929 [cLET-42-M15]">
      <seq>caattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactgtccttctcgaagcctgcacatttgctgtcactctttggatacccttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101942" stop="103962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102242" g_stop="102310" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102437" i_length="127">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102438" g_stop="102508" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="140" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="317" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="513" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103552" g_stop="103662" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="624" r_length="111" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E298929" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102242" e_stop="102310"/>
          <exon e_start="102438" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTAT</genome_strand>
        <mrna_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG...............................................................................................................................GTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTGTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E258857" ref_strand="+" ref_description="SGN-E258857 [cLEG-41-K19]">
      <seq>caattccaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101942" stop="103100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102242" g_stop="102310" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="164" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102800" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="216" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E258857" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>216</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258857" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102242" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCT</genome_strand>
        <mrna_strand>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245955" ref_strand="+" ref_description="SGN-E245955 [cLEF-51-E10]">
      <seq>gcaaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaagccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101948" stop="103356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102247" g_stop="102310" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102437" i_length="127">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102438" g_stop="102508" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="135" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="312" r_length="177" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103056" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="368" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E245955" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102247" e_stop="102310"/>
          <exon e_start="102438" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103056"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGA</genome_strand>
        <mrna_strand>GCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG...............................................................................................................................GTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAAGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544611" ref_strand="+" ref_description="SGN-E544611 [TUS-67-A13]">
      <seq>caaatctctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatngtcttctaaagcaaaagtactttgctcatcaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101948" stop="103997"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102248" g_stop="102310" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102437" i_length="127">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102438" g_stop="102622" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="248" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102623" i_stop="102748" i_length="126">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="425" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="621" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103552" g_stop="103697" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="767" r_length="146" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E544611" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102248" e_stop="102310"/>
          <exon e_start="102438" e_stop="102622"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATC</genome_strand>
        <mrna_strand>CAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG...............................................................................................................................GTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTAC..............................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATNGTCTTCTAAAGCAAAAGTACTTTGCTCATCAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305871" ref_strand="+" ref_description="SGN-E305871 [cLEY-17-A12]">
      <seq>aaatctctcatcttcatcggttcactgccactgttacctcagtgccggcggtggactctccggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101949" stop="103424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102249" g_stop="102310" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102437" i_length="127">
            <donor d_prob="0.941" d_score="0.98"/>
            <acceptor a_prob="0.909" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102438" g_stop="102622" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="247" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102623" i_stop="102748" i_length="126">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="424" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103124" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="548" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E305871" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102249" e_stop="102310"/>
          <exon e_start="102438" e_stop="102622"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTT</genome_strand>
        <mrna_strand>AAATCTCTCATCTTCATCGGTTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG...............................................................................................................................GTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTAC..............................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337232" ref_strand="+" ref_description="SGN-E337232 [cTOE-7-A18]">
      <seq>tctcatcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101954" stop="103376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102254" g_stop="102310" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="152" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="329" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103076" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="405" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E337232" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102254" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTG</genome_strand>
        <mrna_strand>TCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E244973" ref_strand="+" ref_description="SGN-E244973 [cLEF-2-D15]">
      <seq>tcgtgccgaattcggcacgagtcttcatcggctcactgccactgttacctcagtgccggcggtggactctccgaaaaatttagtgaattctttacaggttaagtacttgatggtatttcttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgagctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaaagtgggacaaagttctgtgtttgtgtgaaaggagtacttcccgtggcttatgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="101955" stop="103404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102259" g_stop="102310" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="73" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102414" g_stop="102508" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="168" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="345" r_length="177" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103001" g_stop="103104" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="451" r_length="106" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E244973" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102259" e_stop="102310"/>
          <exon e_start="102414" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTC-AAAGTGGGACAAAGTTCTGTGTTTGTGTG-AAGGAGTTCTTCCCGTGGCTTATGATGC</genome_strand>
        <mrna_strand>TCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG.......................................................................................................AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGAGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAAGGAGTACTTCCCGTGGCTTATGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E416610" ref_strand="+" ref_description="SGN-E416610 [STM-23-E18]">
      <seq>atttcttagctggaacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtctggttcctttaacctatgataatagatttagaggagctacctgataaacctgctcctctacttaagcaagacagggagcttgcaaaggatggtttctctgttaattgtgctcgtgtattagtcggttcaggccgtgagacttttgagaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctccaattcaaagtgggacaaagttctgtgtttgcgtgaaggagttcttcccgtggcttatgatgcctctgcaggtggtttatgtcaccgagaacaagaactcgaaaagggtgcttcatttagttttggcggtggaactctccaaggacatttgctggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102155" stop="103501"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102455" g_stop="102508" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="0.96"/>
            <acceptor a_prob="0.982" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="234" r_length="179" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="429" r_length="195" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E416610" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102455" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTAGCTGG-ACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAA-CTATGATAAAAGATTTAGAGGAACTA-CTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG</genome_strand>
        <mrna_strand>ATTTCTTAGCTGGAACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACCTATGATAATAGATTTAGAGGAGCTACCTGATAAACCTGCTCCTCTACTTAAGCAAGACAGGGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGTGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAGAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCCAATTCAAAGTGGGACAAAGTTCTGTGTTTGCGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTGCAGGTGGTTTATGTCACCGAGAACAAGAACTCG-AAAAGGGTGCTTCATTTAGTTTTGGCGGTGGAACTCTCCAAGGACATTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E248777" ref_strand="+" ref_description="SGN-E248777 [cLEG-5-A1]">
      <seq>ttagctggacgcgtccatctcctgaagagcagaaagcatgtatcaacaagtaaagaatgcccagaacttgttactggcttcgttccaatttatttgtcttatcttgctttttaatccgtttaccagagattctagaccgctacatcgttttgggacactctacgtatgtttattttaagattaaactctgtgtcaactcaacaaattgaaatagaatgagtaatttatttatttccctttctattggtttaattgtgggaatcattattgagggtttcgtctgtaacaggtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102160" stop="103344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102460" g_stop="102925" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103001" g_stop="103044" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="510" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E248777" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102460" e_stop="102925"/>
          <exon e_start="103001" e_stop="103044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAA</genome_strand>
        <mrna_strand>TTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E353610" ref_strand="+" ref_description="SGN-E353610 [cTOS-15-P14]">
      <seq>aagtctggttcctttaactatgataaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaagcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggctataactgtgtgtgaacaggaactctttgntgtaaaaattcccatccatagttatgttggggcttcatttcatgtatatttctttgcatatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102447" stop="104138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102507" g_stop="102508" g_length="2"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2" r_length="2" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240">
            <donor d_prob="0.931" d_score="0.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102749" g_stop="102925" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="3" r_stop="179" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="375" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103552" g_stop="103838" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="660" r_length="285" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E353610" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102507" e_stop="102508"/>
          <exon e_start="102749" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATAT</genome_strand>
        <mrna_strand>AA................................................................................................................................................................................................................................................GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAAGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGNTGTAAAA-ATTCCCATCCATAGTTATGTTGGGGCTTCATTTCATGTATATTTCTTTGCA-TATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377928" ref_strand="+" ref_description="SGN-E377928 [TUS-20-L24]">
      <seq>taaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggctataactgtgtgtgaacaggaactctttgttgtaaaagattcccatccatagttatgttgggtcttcatttcatgtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102470" stop="125911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102770" g_stop="102925" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="352" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103552" g_stop="103819" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="620" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103820" i_stop="104390" i_length="571">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.264" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104391" g_stop="104419" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="649" r_length="29" r_score="0.690"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E377928" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102770" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103819"/>
          <exon e_start="104391" e_stop="104419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAATGTATATCTCTCTACTTCTCCATCTTCCTTTGAATAGCTGTTATTCTTGTTCTGGTGGACCTACAGAAGTGCGAATCTGAGTTCCTTATTCACGGGATGGTTAATTACAGTCGTTTCCTAGGCCTCTCCCTCTCCTCCCCTCCCAGAAGAAGAATTAAAACAAAACGATCATGTTCATCTGCTTTCTTCTTCATGACTCAAAAGAGAACTTAATAAACTGTATAATCAGTTAAAGTAGAAATATACAAACGCAAATCGATTTAGTCGTTAAAACTATAGCTATGTAAATGTGCAAACTCTAGCCATTAACTAACACAAAAGAAGCAAAACTAATACCAAACGAAGTTCCTAAAATGTTCTGTTCATTAGTCATTAACTAAGACAAAAAAGAAGCAAAAGCAATACCAAAA</genome_strand>
        <mrna_strand>TAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E232054" ref_strand="+" ref_description="SGN-E232054 [cLED-7-D9]">
      <seq>taaaagatttagaggaactactgagaaacctgctcctctacttaagcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggctataactgtgtgtgaacagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102470" stop="104064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102770" g_stop="102925" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="352" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103552" g_stop="103764" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="565" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E232054" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102770" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGA</genome_strand>
        <mrna_strand>TAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544610" ref_strand="+" ref_description="SGN-E544610 [TUS-67-A13](-)">
      <seq>agcaagacagtgagcttgcaaaggatggtttctctgttaattgtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggctataactgtgtgtgaacaggaactctttgttgtaaaagattcccatccatagttatgttgggtcttcatttcatgtatatttctttgcattatatgcacgacctagttactaataatgcaattctagtccttgttaaagaaaaatgtaattgtagtccaatagctggataatcagtgtgatttaattaagtgaatgcatagaagaaaaactatgcataagaacccaatagcgagaatcatttcaagaaagggtcattccattctaaaaaaaaaaaaaaaaggaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102514" stop="104309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102814" g_stop="102925" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="308" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103552" g_stop="104010" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="767" r_length="459" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="768" polyA_stop="781"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E544610" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102814" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="104010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</genome_strand>
        <mrna_strand>AGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E369871" ref_strand="+" ref_description="SGN-E369871 [TUS-26-F21](-)">
      <seq>gtgctcgagtattagtcggttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttataaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggctataactgtgtgtgaacaggaactctttgttgtaaaagattcccatccatagttatgttgggtcttcatttcatgtatatttctttgcattatatgcacgacctagttactaataatgcaattctagtccttgttaaagaaaaatgtaattgtagtccaatagctggataatcagtgtgatttaattaagtgaatgcatagaagaaaaactatgcataagaacccaatagcgagaatcatttcaagaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102556" stop="104292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102856" g_stop="102925" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103001" g_stop="103196" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="266" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103552" g_stop="103994" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="709" r_length="443" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E369871" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102856" e_stop="102925"/>
          <exon e_start="103001" e_stop="103196"/>
          <exon e_start="103552" e_stop="103994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGG</genome_strand>
        <mrna_strand>GTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG...........................................................................GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTATAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302125" ref_strand="+" ref_description="SGN-E302125 [cLEW-19-D13]">
      <seq>gagaactagtctgttcaggccgtgagacttttgaaaagggaaaagctgcccttcaaaattggaggtttggtatatcagttattcttgtagaaatatcatgcgatcaatggtctgattatgtaccaaactaactttgcaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggtcagtttgctctccttgttgcaattgtttgtcttacactatacctttcaactgttcaggttttctggttatgatatcattaggttcatttcaatctagctatataaaataaacattaaggatttaagattatgtttcctttacaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102562" stop="103645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102862" g_stop="103345" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E302125" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102862" e_stop="103345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCT</genome_strand>
        <mrna_strand>GAGAACTAGTCTGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267614" ref_strand="+" ref_description="SGN-E267614 [cLEI-8-P3]">
      <seq>gaaaagggaaaagctgcccttcaaaattggaggtttggtatatcagttattcttgtagaaatatcatgcgatcaatggtctgattatgtaccaaactaactttgcaggcattttggattgaattgggcgtttgttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactctaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctactttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggggaagaaacatttatctgcttaaaacatgtgagggtataactgtgtgtgaacaggaactcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102594" stop="104071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102894" g_stop="103196" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103552" g_stop="103771" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="523" r_length="220" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E267614" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102894" e_stop="103196"/>
          <exon e_start="103552" e_stop="103771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTT</genome_strand>
        <mrna_strand>GAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCTAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTACTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGGGAAGAAACATTTATCTGCTTAAAACATGTGAGGGTATAACTGTGTGTGAACAGGAACTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272997" ref_strand="+" ref_description="SGN-E272997 [cLEM-25-B15]">
      <seq>gttgatccaaaagctcaaattcaaagtgggacaaagttctgtgtttgtgtgaaggagttcttcccgtggcttatgatgcctctacaggttgtttatgttagcgagaacaagaactcgaaaaagggggcttcgtttagttttggcagtggaactctgcaaggacatttgctggctggtgaagaacgtttttcaatagcattggacgaaaatgatctagtttggtacgagatactttccttctcgaagcctgcacatttgctgtcactctttggatacccttatgttcttctaaggcaaaagtactttgctcatcaatcaggtagtgcggtgaagaaacatttatctgcttaaaacatgtgaggctataactgtgtgtgaacaggaactctttgttgtaaaagattcccatccatagttatgttgggtcttcatttcatgtatatttctttgcattatatgcacgacctagttactaataatgcaattctagtccttgttaaagaaaaatgtaattgtagtccaatagctggataatcagtgtgatttaattaagtgaatgcatagaagaaaaactatgcataagaacccaatagcgagaatcatttcaagaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="102726" stop="104292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103026" g_stop="103196" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103552" g_stop="103994" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="614" r_length="443" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E272997" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103026" e_stop="103196"/>
          <exon e_start="103552" e_stop="103994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCTGCTAACCCAGCCATTGCAAAAGGTTAATATTAGTAGTGGTAGTGTCTAAGTCCAACACAATGCTTACTAGAATGGTAATGTTTTGTCCTATTTTCCATGTTTGAAGTTTTAAGCTTACCATACATCTTAGACCTATCATTCTCCTTTATATTGCTGCATGTAAAACTTGACAATATATGAGTTTGTGATACCAAGTGTTTGAGCAGGCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGG</genome_strand>
        <mrna_strand>GTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG...................................................................................................................................................................................................................................................................................................................................................................GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="109426" stop="110321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109726" g_stop="110047" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109726" e_stop="110047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTATATTTCACTGTAATTGTATAATTCACAATTGTATAATTCTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAATAGAAATTATACACTTCTGTGTATAAAGCGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="109426" stop="110321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109726" g_stop="110030" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>305</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109726" e_stop="110030"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTATATTTCACTGTAATTGTATAATTCACAATTGTATAATTCTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAATAGAAATTATACACTTCTG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAGGTTTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="111804" stop="110908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111504" g_stop="111182" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>323</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111504" e_stop="111182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAACTAGAAAAAATTGTATTTCACTGCAATGGTATAATTCACAATTGTATAATTTTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAGCAGAAATTATACACTTCTGTGTATAAAGCGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="111804" stop="110908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111504" g_stop="111199" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111504" e_stop="111199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATG-TTTT-TCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAACTAGAAAAAATTGTATTTCACTGCAATGGTATAATTCACAATTGTATAATTTTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAGCAGAAATTATACACTTCTG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAGGTTTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E272965" ref_strand="+" ref_description="SGN-E272965 [cLEM-25-K3]">
      <seq>gaggaaattctggaccgaacccaaagtctttctctctctacattatctctctagatttgttgttttcaagtttcaacctctgcggttagttcagactaaactgaagaacaccttgtatacctcggagacggcgaggaatgtgtattgagaaacaagtgttttctagtgaatgaatttttcgaagaaggtgaaatgggagcattatgccgcctggccactctcgggacaccttggatcgtttctccgaccgttgtctccacgttttcccatgtctctccgatcccgctcggagatccacttgttgcttgagaatagcgttggtgatgctgcacttgatctatctgggcgttctatttgtctttgacaaagatttgattcataaaactaaagaagagccatggtacacaactgtctatttgatcctgtttgctgctacactggctcaatacttcatcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="119783" stop="121527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120082" g_stop="120361" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120362" i_stop="120456" i_length="95">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120457" g_stop="120571" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="400" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120572" i_stop="121170" i_length="599">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.641" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121171" g_stop="121228" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="458" r_length="58" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E272965" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120082" e_stop="120361"/>
          <exon e_start="120457" e_stop="120571"/>
          <exon e_start="121171" e_stop="121228"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCAAATTCTGGACCGAACCCAAAGTCTTTCTCTCTCTACATTATCTCTCTAGATTTGTTGTTTTCAAGTTTCAAC-TCTGCGGTTAGTTCAGACTAAACTGAAGAACA-CTTGTATA-CTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATG-CG-CTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCGGTATCAATTTTTTCATCTATTCTAACCTCGTAGTTTAATTTGAATGTTTTAAACCTTACTCTTTTTTTTTGGTTGTTGGTTTGATTGATTTTTAGCTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATGGTATTTACTCTTACTTTACTTATTGGGGAAAAAGTTATCTTTATTTTTCTTCAGAATTAGCAAGAGACCAAGTGTTTCCCTATGAGAGAATCGATGATGTGAGAGCAAAACCAATAATTCAGTGCAAAAAATGAGTCTTTGTTCGCCTAATAACTTGCTCTGGCTTTACTTTATTGTTTGGTTCGCCTAATTTCATTAGTAATTAGTGGTCATGTTATATTTTAGCTAGAAATATAGTGCATTAAATAAAAAAGATAGAATCTTAAGTGTTATGCAGCAGTCTTTCAGCTTGGTTGTTCAGTGCCTGTATTATGGTTCTTGCTAAAATGCACCCTCTTCTGTTTTATGTGATATTATTTACTCATTAGTCTATCTAAAAATAATGAAGGCCTTTTTATATTTGGATAATCTGACCAAAAAGAAAAACAGTACTCCAATTGGATATAATCCTATTCAAAGTAGTCCCCAATTCAAAAGGAAAATGATGGAGTTTGAATAAAGTGGTCCCCTTTCGATCATTTTTAATGCTTTTGTAGAGATTTTACTTTTACTTGGGTCTTTATGGTATAACTGCTGATACTCTCTTCCTTGCCTTCAAGGTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACT</genome_strand>
        <mrna_strand>GAGGAAATTCTGGACCGAACCCAAAGTCTTTCTCTCTCTACATTATCTCTCTAGATTTGTTGTTTTCAAGTTTCAACCTCTGCGGTTAGTTCAGACTAAACTGAAGAACACCTTGTATACCTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCCGCCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCG...............................................................................................CTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E730745" ref_strand="+" ref_description="SGN-E730745 [LA25AC07]">
      <seq>cattgtctttctctctctacattatctctctagatttgttgttttcaagtttcaactctgcggttagttcagactaaactgaagaacacttgtatactcggagacggcgaggaatgtgtattgagaaacaagtgttttctagtgaatgaatttttcgaagaaggtgaaatgggagcattatgcgctggccactctcgggacaccttggatcgtttctccgaccgttgtctccacgttttcccatgtctctccgatcccgctcggagatccacttgttgcttgagaatagcgttggtgatgctgcacttgatctatctgggcgttctatttgtctttgacaaagatttgattcataaaactaaagaagagccatggtacacaactgtctatttgatcctgtttgctgctacactggctcaatacttcatcacttcaggttcttctcctggctatgttgttgatgcaatgagggctgtcaatgaggcagatgcatcatgtaatagggcatcaattacctcaaaacagcctgcttcaagcaaaaacggcgatgtagttattgcaatcgaccggaaccagttgggaagctatcttcaaggccgtggtatgatagcatggacaaagctagtgatggatatgtatcccagtggaacatctcttagaggtgtgacttgcagttactgtaatgttgtgcagcctccacgcgctaaacattgtcatgattgtgacaaatgtgttcttcaatttgatcatcattgtgtttggcttggcacatgcatacgacagggtaatcattgcgctttttggtggtacatttgtggagaaacagcccttatccctttggacgggcccgtttatatattcaattttttgagtctgatatatattccaagccttggggggttatatgcaaattatgatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="119803" stop="124718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120103" g_stop="120361" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120362" i_stop="120456" i_length="95">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120457" g_stop="120571" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="374" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120572" i_stop="121170" i_length="599">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.641" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121171" g_stop="121245" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="449" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121246" i_stop="121362" i_length="117">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121363" g_stop="121434" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="521" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="121435" i_stop="121595" i_length="161">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121596" g_stop="121733" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="659" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="121734" i_stop="122906" i_length="1173">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.324" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="122907" g_stop="122940" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="693" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="122941" i_stop="123460" i_length="520">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="123461" g_stop="123570" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="803" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="123571" i_stop="124327" i_length="757">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.810" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="124328" g_stop="124417" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="804" r_stop="895" r_length="92" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E730745" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120103" e_stop="120361"/>
          <exon e_start="120457" e_stop="120571"/>
          <exon e_start="121171" e_stop="121245"/>
          <exon e_start="121363" e_stop="121434"/>
          <exon e_start="121596" e_stop="121733"/>
          <exon e_start="122907" e_stop="122940"/>
          <exon e_start="123461" e_stop="123570"/>
          <exon e_start="124328" e_stop="124417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTCTTTCTCTCTCTACATTATCTCTCTAGATTTGTTGTTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCGGTATCAATTTTTTCATCTATTCTAACCTCGTAGTTTAATTTGAATGTTTTAAACCTTACTCTTTTTTTTTGGTTGTTGGTTTGATTGATTTTTAGCTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATGGTATTTACTCTTACTTTACTTATTGGGGAAAAAGTTATCTTTATTTTTCTTCAGAATTAGCAAGAGACCAAGTGTTTCCCTATGAGAGAATCGATGATGTGAGAGCAAAACCAATAATTCAGTGCAAAAAATGAGTCTTTGTTCGCCTAATAACTTGCTCTGGCTTTACTTTATTGTTTGGTTCGCCTAATTTCATTAGTAATTAGTGGTCATGTTATATTTTAGCTAGAAATATAGTGCATTAAATAAAAAAGATAGAATCTTAAGTGTTATGCAGCAGTCTTTCAGCTTGGTTGTTCAGTGCCTGTATTATGGTTCTTGCTAAAATGCACCCTCTTCTGTTTTATGTGATATTATTTACTCATTAGTCTATCTAAAAATAATGAAGGCCTTTTTATATTTGGATAATCTGACCAAAAAGAAAAACAGTACTCCAATTGGATATAATCCTATTCAAAGTAGTCCCCAATTCAAAAGGAAAATGATGGAGTTTGAATAAAGTGGTCCCCTTTCGATCATTTTTAATGCTTTTGTAGAGATTTTACTTTTACTTGGGTCTTTATGGTATAACTGCTGATACTCTCTTCCTTGCCTTCAAGGTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCTCCTGGGTAATTTCATGCACACTCTTTACTTTCTAATTTACAGGCCATTGTTATACTTTATGCGCTTCAGTGCCAGTAAAGTTGCATTGTGTGATCAGTATAATCTTTTATTTGAACATGTAGCTATGTTGTTGATGCAATGAGGGCTGTCAATGAGGCAGATGCATCATGTAATAGGGCATCAATTACCTCAAAGTAAGAGAATTTCCTTTGTGGGTTATTTACATGGAAAGTAAATTACTGGATTCTCCTGCCATATCTGTGAAATATCAAACTATAAATATGTGGAGTGTTCTGCAGAATTATCTAATTGCTACTATTTTCTGCCTATTGTGATGTAAAATGATCAAGCAAAGACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACCGGAACCAGTTGGGAAGTTATCTTCAAGGCCGTGGTATGATAGCATGGACAAAGCTAGTGATGGATATGTATCCCAGTGGAACATCTCTTAGGTAGGAATGACTTATATAATACCTTGTTTATGCTTTTCCTTTTGTCTATAAAGCAGCTGGCATTGTTTTCAGCCTATTTTGCAGCCTCTACTGTAGTGCTATTTGGTTCATTTAGTTTCATCTTACATATTGACTCAGTTTGACTTAAATTGTTTATGGAACAAGAAAAGATTTCATTCATAATCATTCAAAATCTGCTGTTTTGGATTGTCTTTCTTGTTGGACCGGGAGGATATAGGCATATACCTCCCCCCTCCCCACTTAAAGATTTGGATATTGGGAGCACCTTATGGTGATGGCAAAGTTGTCTCCACTCATTATCGATTTCACAAGTGATGCTTATATAATAACTATGAGATTCAGATGAAAAGTTGTCAATAGTCTTAGATACAGAAAGCATCTCAGCATCAGAAGGTACCCCCAACTGGCTAACTGAGATATTGTGAGGATTTGGCTAACTGCAGCATGCTGTAGATTTTATATGGAGGGGAAAAGCTGTAACAACCCTGTATGATTTCCTGTGAATGTTCAGAAATTTGTAATTTTTCATTCGATAACAAAGGAAGTTGAAATATAATGAAAATTTCTGCGGAGATGTGTTATTATTGAATCATTTCATGGAATAGCTAATAGCCATGTAATACAAGTGCCTCCAGCATGATCTGTGGGTTAGTCCCTCGTTACAAGTTCAATCATGCCTCAGGAAAAATCCTGGTATCTAAATGGAGAACAGGGTGGACCCATTATCCACCGAGGAACCTTGTGCCATTGGTCACTGAAGATTTGGGTTTCTTACGGTTTCTTAGGGCTATGGGTTTAGGCCCTTAGGGATAAGGGAGTTCATGGATGAATAATGTTCTTTCCTAATCCCTTAAGACCTTATTAATGGCGTGAGTTGGTCCCGAGGGGAAAACGTCCACATTTTCAAGTTCAAACAAGGCCCAGAGCGGGCATGACCAAATTTTTACTGTTTTACGTTGGCTATAGTCCATGGATTTTAGAAAAAAAAAATGACCATGTTAATTTAGATTTACTTTTATCTTTCCCATTTCCTTTCCCCTTACACCACTTTTGTATAGAAGTATGACTGTCGATTCTGTAGTTATAAATTGCATGATTCAATTTGCAAAAGCATCAGTTCCCTTGCTAACTCATTTTTGTTCTCTTCTCCAGAGGTGTGACTTGCAGTTACTGTAATGTTGTGCAGGTAAAAATTTCTTCTTTCTGTCTTCCATTTGTTTGCAGAACAAACATTTCGGTACTTCTGATGATACTTAGTGATTATAGGAGCATTTTAATATTAGCCAAACTAGTGACATGATTTCAAAGCCAAATACTGACTACACCTAGATTTGGAAGGAAATGAGGCAAACTTGTGACAGCAATTTGGTGCTAATATTTTCTTGTGTTGTGCCTCACTTAACCCTTCACATTGAAATGAGGTTGAGGACAGATATATATTCAATTGTTTCAAATGGTTTATGACCTTCTGATTTCTGATTTATACTATTGTGCTTATCCTAATATTTGCACACTTATTTATCCAATAAGTTTATGGTTGCCATTTGCCAAAGTTAAAAGTTTACTTGTGTCAGAAGAACCAATTTCTATAATGGACCTTATACAGTGACTTCTGTCTTGTGAAGTGCCTAGAGCTTATACTTCCACTAGACTACATTTGTCAGTTATGTCAACAACGTTTGATTTTTACTCTGCTTGATTTGCAGCCTCCACGCGCTAAACATTGTCATGATTGTGACAAATGTGTTCTTCAATTTGATCATCATTGTGTTTGGCTTGGCACATGCATAGGACAGGGTAATCATTGCGCTTTTTGGTGAGCATCCATGCTACTAAGTTGATGCACCATTAATGTGTTTATCTTGTTCGCAGTTCAGTGAAATTTTTCTTGCGATTTGATTGAAATGTTTATTTGTACCTTCAGAAGAACTAAATGAAAGAAGTCTTGCTGTGTATTATAAAGATTTATTTCTATGATGGTTTCCACATGTTATTTTGGAGCTAAGTGGAAAGTTGGTGTGGATTTAATATGATTAGAACATGTCAATTGGAGATTTAGGTCCTAGATGTAGATGTTATTTCAGATAATGATACTAATATAGTTATCTCGCTAATTAATGAATATAAAGTCTCATTCAAAATTCTTGCTTTCATGAAGAGGCTTCAATTTTAGCTTGAACCTTTTGAAACGTATCCGTGTCAGCATAGTTTATCAGTTCGAGAAACCTATAAGAGGATGTTGGTCATTTTAAAGATCATTGTGAGAACATATTGAACTAGTTATCTGGGCTTGGGATATATGTGTACTTCGATGTGTCTAATTCAATGTTATAAGTCTTGTGTAAGTGACATGATCACTTTTCTACTCTTAAGACCACAATGAAGACACTATTTAGTAGGGGACTTGTCATAATGTACTTTCCTGTAATTTGATGTATTTTTCTTCATCTATAAACATGAATGAAGCATGTCAGGGTGCTTGATTTTCCTGAACTTTTAACTGGTCATAGATTCTTTTTAGGGTTTCAAGTAATTGGTCTTGGTTCGGTTATTTATTTTCCCAAGTATGACAGGTGGTACATTTGTGGAGAAACAG-CCTTATCCCTTTGGACGGGCACG-TTATATATTCAATTTTTGAAGTCTGATATATATTCAAAGCCTTG</genome_strand>
        <mrna_strand>CATTGTCTTTCTCTCTCTACATTATCTCTCTAGATTTGTTGTTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCG...............................................................................................CTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCTCCTGG.....................................................................................................................CTATGTTGTTGATGCAATGAGGGCTGTCAATGAGGCAGATGCATCATGTAATAGGGCATCAATTACCTCAAA.................................................................................................................................................................ACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACCGGAACCAGTTGGGAAGCTATCTTCAAGGCCGTGGTATGATAGCATGGACAAAGCTAGTGATGGATATGTATCCCAGTGGAACATCTCTTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGTGACTTGCAGTTACTGTAATGTTGTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCACGCGCTAAACATTGTCATGATTGTGACAAATGTGTTCTTCAATTTGATCATCATTGTGTTTGGCTTGGCACATGCATACGACAGGGTAATCATTGCGCTTTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTACATTTGTGGAGAAACAGCCCTTATCCCTTTGGACGGGCCCGTTTATATATTCAATTTTTTGAGTCTGATATATATTCCAAGCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314823" ref_strand="+" ref_description="SGN-E314823 [cTOA-20-B12]">
      <seq>tttctctctctacattatctctctagatttgttgttttcaagtttcaactctgcggttagttcagactaaactgaagaacacttgtatactcggagacggcgaggaatgtgtattgagaaacaagtgttttctagtgaatgaatttttcgaagaaggtgaaatgggagcattatgcgctggccactctcgggacaccttggatcgtttctccgaccgttgtctccacgttttcccatgtctctccgatcccgctcggagatccacttgttgcttgagaatagcgttggtgatgctgcacttgatctatctgggcgttctatttgtctttgacaaagatttgattcataaaactaaagaagagccatggtacacaactgtctatttgatcctgtttgctgctacactggctcaatacttcatcacttcaggttcttctcctggctatgttgttgatgcaatgagggctgtcaatgaggcagatgcatcatgtaatagggcatcaattacctcaaaacagcctgcttcaagcaaaaacggcgatgtagttattgcaatcgaccggaaccagttgggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="119810" stop="121957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120110" g_stop="120361" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120362" i_stop="120456" i_length="95">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120457" g_stop="120571" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="367" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120572" i_stop="121170" i_length="599">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.641" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121171" g_stop="121245" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="442" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121246" i_stop="121362" i_length="117">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121363" g_stop="121434" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="514" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="121435" i_stop="121595" i_length="161">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121596" g_stop="121657" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="576" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E314823" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120110" e_stop="120361"/>
          <exon e_start="120457" e_stop="120571"/>
          <exon e_start="121171" e_stop="121245"/>
          <exon e_start="121363" e_stop="121434"/>
          <exon e_start="121596" e_stop="121657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCTCTCTACATTATCTCTCTAGATTTGTTGTTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCGGTATCAATTTTTTCATCTATTCTAACCTCGTAGTTTAATTTGAATGTTTTAAACCTTACTCTTTTTTTTTGGTTGTTGGTTTGATTGATTTTTAGCTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATGGTATTTACTCTTACTTTACTTATTGGGGAAAAAGTTATCTTTATTTTTCTTCAGAATTAGCAAGAGACCAAGTGTTTCCCTATGAGAGAATCGATGATGTGAGAGCAAAACCAATAATTCAGTGCAAAAAATGAGTCTTTGTTCGCCTAATAACTTGCTCTGGCTTTACTTTATTGTTTGGTTCGCCTAATTTCATTAGTAATTAGTGGTCATGTTATATTTTAGCTAGAAATATAGTGCATTAAATAAAAAAGATAGAATCTTAAGTGTTATGCAGCAGTCTTTCAGCTTGGTTGTTCAGTGCCTGTATTATGGTTCTTGCTAAAATGCACCCTCTTCTGTTTTATGTGATATTATTTACTCATTAGTCTATCTAAAAATAATGAAGGCCTTTTTATATTTGGATAATCTGACCAAAAAGAAAAACAGTACTCCAATTGGATATAATCCTATTCAAAGTAGTCCCCAATTCAAAAGGAAAATGATGGAGTTTGAATAAAGTGGTCCCCTTTCGATCATTTTTAATGCTTTTGTAGAGATTTTACTTTTACTTGGGTCTTTATGGTATAACTGCTGATACTCTCTTCCTTGCCTTCAAGGTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCTCCTGGGTAATTTCATGCACACTCTTTACTTTCTAATTTACAGGCCATTGTTATACTTTATGCGCTTCAGTGCCAGTAAAGTTGCATTGTGTGATCAGTATAATCTTTTATTTGAACATGTAGCTATGTTGTTGATGCAATGAGGGCTGTCAATGAGGCAGATGCATCATGTAATAGGGCATCAATTACCTCAAAGTAAGAGAATTTCCTTTGTGGGTTATTTACATGGAAAGTAAATTACTGGATTCTCCTGCCATATCTGTGAAATATCAAACTATAAATATGTGGAGTGTTCTGCAGAATTATCTAATTGCTACTATTTTCTGCCTATTGTGATGTAAAATGATCAAGCAAAGACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACCGGAACCAGTTGGGAA</genome_strand>
        <mrna_strand>TTTCTCTCTCTACATTATCTCTCTAGATTTGTTGTTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCG...............................................................................................CTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCTCCTGG.....................................................................................................................CTATGTTGTTGATGCAATGAGGGCTGTCAATGAGGCAGATGCATCATGTAATAGGGCATCAATTACCTCAAA.................................................................................................................................................................ACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACCGGAACCAGTTGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319518" ref_strand="+" ref_description="SGN-E319518 [cTOB-15-A14]">
      <seq>ttttcaagtttcaactctgcggttagttcagactaaactgaagaacacttgtatactcggagacggcgaggaatgtgtattgagaaacaagtgttttctagtgaatgaatttttcgaagaaggtgaaatgggagcattatgcgctggccactctcgggacaccttggatcgtttctccgaccgttgtctccacgttttcccatgtctctccgatcccgctcggagatccacttgttgcttgagaatagcgttggtgatgctgcacttgatctatctgggcgttctatttgtctttgacaaagatttgattcataaaactaaagaagagccatggtacacaactgtctatttgatcctgtttgctgctacactggctcaatacttcatcacttcaggttcttctcctggctatgttgttgatgcaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="119844" stop="121682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120144" g_stop="120361" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120362" i_stop="120456" i_length="95">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120457" g_stop="120571" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="333" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120572" i_stop="121170" i_length="599">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.641" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121171" g_stop="121245" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="408" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121246" i_stop="121362" i_length="117">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121363" g_stop="121382" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="428" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E319518" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120144" e_stop="120361"/>
          <exon e_start="120457" e_stop="120571"/>
          <exon e_start="121171" e_stop="121245"/>
          <exon e_start="121363" e_stop="121382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCGGTATCAATTTTTTCATCTATTCTAACCTCGTAGTTTAATTTGAATGTTTTAAACCTTACTCTTTTTTTTTGGTTGTTGGTTTGATTGATTTTTAGCTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATGGTATTTACTCTTACTTTACTTATTGGGGAAAAAGTTATCTTTATTTTTCTTCAGAATTAGCAAGAGACCAAGTGTTTCCCTATGAGAGAATCGATGATGTGAGAGCAAAACCAATAATTCAGTGCAAAAAATGAGTCTTTGTTCGCCTAATAACTTGCTCTGGCTTTACTTTATTGTTTGGTTCGCCTAATTTCATTAGTAATTAGTGGTCATGTTATATTTTAGCTAGAAATATAGTGCATTAAATAAAAAAGATAGAATCTTAAGTGTTATGCAGCAGTCTTTCAGCTTGGTTGTTCAGTGCCTGTATTATGGTTCTTGCTAAAATGCACCCTCTTCTGTTTTATGTGATATTATTTACTCATTAGTCTATCTAAAAATAATGAAGGCCTTTTTATATTTGGATAATCTGACCAAAAAGAAAAACAGTACTCCAATTGGATATAATCCTATTCAAAGTAGTCCCCAATTCAAAAGGAAAATGATGGAGTTTGAATAAAGTGGTCCCCTTTCGATCATTTTTAATGCTTTTGTAGAGATTTTACTTTTACTTGGGTCTTTATGGTATAACTGCTGATACTCTCTTCCTTGCCTTCAAGGTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCTCCTGGGTAATTTCATGCACACTCTTTACTTTCTAATTTACAGGCCATTGTTATACTTTATGCGCTTCAGTGCCAGTAAAGTTGCATTGTGTGATCAGTATAATCTTTTATTTGAACATGTAGCTATGTTGTTGATGCAATGA</genome_strand>
        <mrna_strand>TTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCG...............................................................................................CTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCTCCTGG.....................................................................................................................CTATGTTGTTGATGCAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319328" ref_strand="+" ref_description="SGN-E319328 [cTOB-15-A15]">
      <seq>ttttcagggggcaactctgcgggtaggtcacactaaactgaagaacacttgtatactcggagacggcgaggaatgtgtattgagaaacaagtgttttctagtgaatgaatttttcgaagaaggtgaaatgggagcattatgcgctggccactctcgggacaccttggatcgtttctccgaccgttgtcttcacgttttcccatgtctctccgatcccgctcggagatccacttgttgcttgagaatagcgttggtgatgctgcacttgatctatttgggcgttctatttgtctttgacaaagatttgattcataaaactaaagaagagccatggtacacaactgtctatttgatcctgtttgctgttacactggcttaatactttatcacttcaggttcttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="119855" stop="121540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120144" g_stop="120361" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120362" i_stop="120456" i_length="95">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120457" g_stop="120571" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="333" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120572" i_stop="121170" i_length="599">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.641" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121171" g_stop="121240" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="403" r_length="70" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E319328" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120144" e_stop="120361"/>
          <exon e_start="120457" e_stop="120571"/>
          <exon e_start="121171" e_stop="121240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCGGTATCAATTTTTTCATCTATTCTAACCTCGTAGTTTAATTTGAATGTTTTAAACCTTACTCTTTTTTTTTGGTTGTTGGTTTGATTGATTTTTAGCTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATGGTATTTACTCTTACTTTACTTATTGGGGAAAAAGTTATCTTTATTTTTCTTCAGAATTAGCAAGAGACCAAGTGTTTCCCTATGAGAGAATCGATGATGTGAGAGCAAAACCAATAATTCAGTGCAAAAAATGAGTCTTTGTTCGCCTAATAACTTGCTCTGGCTTTACTTTATTGTTTGGTTCGCCTAATTTCATTAGTAATTAGTGGTCATGTTATATTTTAGCTAGAAATATAGTGCATTAAATAAAAAAGATAGAATCTTAAGTGTTATGCAGCAGTCTTTCAGCTTGGTTGTTCAGTGCCTGTATTATGGTTCTTGCTAAAATGCACCCTCTTCTGTTTTATGTGATATTATTTACTCATTAGTCTATCTAAAAATAATGAAGGCCTTTTTATATTTGGATAATCTGACCAAAAAGAAAAACAGTACTCCAATTGGATATAATCCTATTCAAAGTAGTCCCCAATTCAAAAGGAAAATGATGGAGTTTGAATAAAGTGGTCCCCTTTCGATCATTTTTAATGCTTTTGTAGAGATTTTACTTTTACTTGGGTCTTTATGGTATAACTGCTGATACTCTCTTCCTTGCCTTCAAGGTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCT</genome_strand>
        <mrna_strand>TTTTCAGGGGGCAACTCTGCGGGTAGGTCACACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTTCACGTTTTCCCATGTCTCTCCGATCCCG...............................................................................................CTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATTTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACACAACTGTCTATTTGATCCTGTTTGCTGTTACACTGGCTTAATACTTTATCACTTCAGGTTCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560278" ref_strand="+" ref_description="SGN-E560278 [19907]">
      <seq>gtgatgtanaatgatcaagcaaagacagcctgcttcaagcaaaaacggcgatgtagttattgcaatcgacaggaaccagttgggaagtaatcttcaaggccgtggtacgatagcgtggacaaagctagtgatggatatgtatcccagtggaatgtctcttagaggtgtgacttgcagttactgtaatgttgtgcagcctccacgcgctaaacattgtcatgattgtgacaaatgtgttcttcaatttgatcatcattgtgtttggcttggaacatgcataggacagggtaatcattgcgctttttggtggtacatttgtggagaaacagccttatccctttggacgggcacgttatatattcaattcttgaagtctgatatatcaaagccttggtggttatatgcaattatgatcttgctgcttgctactctgtttttctgcctcatcttccttctcctcctcctactttttcatagctacctaattttgacaaatcagaccacttatgagcttgtgagacgacggcgcatccaatatttgaggaacattcctgaaagagtgtatccatttagtagaggagcatgcagaaatttgtatgagttttgctgtgcccagcgtagcacatataggatggaaccactgncaacaggacaagaacttgaagataagttgagaccctacacatgctcagatgttttatcctgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="121272" stop="126564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121572" g_stop="121733" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121734" i_stop="122906" i_length="1173">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.324" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="122907" g_stop="122940" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="196" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="122941" i_stop="123460" i_length="520">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123461" g_stop="123570" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="306" r_length="110" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123571" i_stop="124327" i_length="757">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.810" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="124328" g_stop="124417" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="393" r_length="87" r_score="0.956"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="124418" i_stop="125317" i_length="900">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="125318" g_stop="125401" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="477" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="125402" i_stop="125793" i_length="392">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="125794" g_stop="125859" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="543" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="125860" i_stop="126100" i_length="241">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="126101" g_stop="126264" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="707" r_length="164" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E560278" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E560278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121572" e_stop="121733"/>
          <exon e_start="122907" e_stop="122940"/>
          <exon e_start="123461" e_stop="123570"/>
          <exon e_start="124328" e_stop="124417"/>
          <exon e_start="125318" e_stop="125401"/>
          <exon e_start="125794" e_stop="125859"/>
          <exon e_start="126101" e_stop="126264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATGTAAAATGATCAAGCAAAGACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACCGGAACCAGTTGGGAAGTTATCTTCAAGGCCGTGGTATGATAGCATGGACAAAGCTAGTGATGGATATGTATCCCAGTGGAACATCTCTTAGGTAGGAATGACTTATATAATACCTTGTTTATGCTTTTCCTTTTGTCTATAAAGCAGCTGGCATTGTTTTCAGCCTATTTTGCAGCCTCTACTGTAGTGCTATTTGGTTCATTTAGTTTCATCTTACATATTGACTCAGTTTGACTTAAATTGTTTATGGAACAAGAAAAGATTTCATTCATAATCATTCAAAATCTGCTGTTTTGGATTGTCTTTCTTGTTGGACCGGGAGGATATAGGCATATACCTCCCCCCTCCCCACTTAAAGATTTGGATATTGGGAGCACCTTATGGTGATGGCAAAGTTGTCTCCACTCATTATCGATTTCACAAGTGATGCTTATATAATAACTATGAGATTCAGATGAAAAGTTGTCAATAGTCTTAGATACAGAAAGCATCTCAGCATCAGAAGGTACCCCCAACTGGCTAACTGAGATATTGTGAGGATTTGGCTAACTGCAGCATGCTGTAGATTTTATATGGAGGGGAAAAGCTGTAACAACCCTGTATGATTTCCTGTGAATGTTCAGAAATTTGTAATTTTTCATTCGATAACAAAGGAAGTTGAAATATAATGAAAATTTCTGCGGAGATGTGTTATTATTGAATCATTTCATGGAATAGCTAATAGCCATGTAATACAAGTGCCTCCAGCATGATCTGTGGGTTAGTCCCTCGTTACAAGTTCAATCATGCCTCAGGAAAAATCCTGGTATCTAAATGGAGAACAGGGTGGACCCATTATCCACCGAGGAACCTTGTGCCATTGGTCACTGAAGATTTGGGTTTCTTACGGTTTCTTAGGGCTATGGGTTTAGGCCCTTAGGGATAAGGGAGTTCATGGATGAATAATGTTCTTTCCTAATCCCTTAAGACCTTATTAATGGCGTGAGTTGGTCCCGAGGGGAAAACGTCCACATTTTCAAGTTCAAACAAGGCCCAGAGCGGGCATGACCAAATTTTTACTGTTTTACGTTGGCTATAGTCCATGGATTTTAGAAAAAAAAAATGACCATGTTAATTTAGATTTACTTTTATCTTTCCCATTTCCTTTCCCCTTACACCACTTTTGTATAGAAGTATGACTGTCGATTCTGTAGTTATAAATTGCATGATTCAATTTGCAAAAGCATCAGTTCCCTTGCTAACTCATTTTTGTTCTCTTCTCCAGAGGTGTGACTTGCAGTTACTGTAATGTTGTGCAGGTAAAAATTTCTTCTTTCTGTCTTCCATTTGTTTGCAGAACAAACATTTCGGTACTTCTGATGATACTTAGTGATTATAGGAGCATTTTAATATTAGCCAAACTAGTGACATGATTTCAAAGCCAAATACTGACTACACCTAGATTTGGAAGGAAATGAGGCAAACTTGTGACAGCAATTTGGTGCTAATATTTTCTTGTGTTGTGCCTCACTTAACCCTTCACATTGAAATGAGGTTGAGGACAGATATATATTCAATTGTTTCAAATGGTTTATGACCTTCTGATTTCTGATTTATACTATTGTGCTTATCCTAATATTTGCACACTTATTTATCCAATAAGTTTATGGTTGCCATTTGCCAAAGTTAAAAGTTTACTTGTGTCAGAAGAACCAATTTCTATAATGGACCTTATACAGTGACTTCTGTCTTGTGAAGTGCCTAGAGCTTATACTTCCACTAGACTACATTTGTCAGTTATGTCAACAACGTTTGATTTTTACTCTGCTTGATTTGCAGCCTCCACGCGCTAAACATTGTCATGATTGTGACAAATGTGTTCTTCAATTTGATCATCATTGTGTTTGGCTTGGCACATGCATAGGACAGGGTAATCATTGCGCTTTTTGGTGAGCATCCATGCTACTAAGTTGATGCACCATTAATGTGTTTATCTTGTTCGCAGTTCAGTGAAATTTTTCTTGCGATTTGATTGAAATGTTTATTTGTACCTTCAGAAGAACTAAATGAAAGAAGTCTTGCTGTGTATTATAAAGATTTATTTCTATGATGGTTTCCACATGTTATTTTGGAGCTAAGTGGAAAGTTGGTGTGGATTTAATATGATTAGAACATGTCAATTGGAGATTTAGGTCCTAGATGTAGATGTTATTTCAGATAATGATACTAATATAGTTATCTCGCTAATTAATGAATATAAAGTCTCATTCAAAATTCTTGCTTTCATGAAGAGGCTTCAATTTTAGCTTGAACCTTTTGAAACGTATCCGTGTCAGCATAGTTTATCAGTTCGAGAAACCTATAAGAGGATGTTGGTCATTTTAAAGATCATTGTGAGAACATATTGAACTAGTTATCTGGGCTTGGGATATATGTGTACTTCGATGTGTCTAATTCAATGTTATAAGTCTTGTGTAAGTGACATGATCACTTTTCTACTCTTAAGACCACAATGAAGACACTATTTAGTAGGGGACTTGTCATAATGTACTTTCCTGTAATTTGATGTATTTTTCTTCATCTATAAACATGAATGAAGCATGTCAGGGTGCTTGATTTTCCTGAACTTTTAACTGGTCATAGATTCTTTTTAGGGTTTCAAGTAATTGGTCTTGGTTCGGTTATTTATTTTCCCAAGTATGACAGGTGGTACATTTGTGGAGAAACAGCCTTATCCCTTTGGACGGGCACGTTATATATTCAATTTTTGAAGTCTGATATATATTCAAAGCCTTGGTATGTATATTTTATGATGCTTTATCATTTAAGAGCTTCTCTGCTTAGCCTCCCTTATTATGTTTCTCCTCTGCTCCTTACTGATCTTCCTTCCGAGAAGAAAATAAAGATGGAGGTTCTGGGGGGAGAATTGGAGAAGAACAATATGCACCCCAAAAGAAAAAACTAAAAAAACTAAAGGGAGATTAAACTGCTCAGTTTTCATACCCAAACTTATAATAAGATGTTATTCATTTACTTTAGTTGGCAAAAGGTAAGCTTGCACATATTGGAATATTTTACTTGCTGTTTGAAATATCATATCGTCTTCTGAGAAATAAGAAGCTTGAAGAGAGTCAATGCCACTACCCTTATTGGATCTTATACAACCATGAAATGTAAGCTATTGTGATTATCTTAAGATAGCAATTGAAGACTTATCCCAAAAAAATTAGATGATTATCTTATATTGGCTGTCAGCATACCGTAACCCATGTTCTATTATCTAGAATCTAGATAGGACCATCCATACAAAGCTCATAGGTGGAATATGCACTACCTTGATTTTTAAAAATTGCTAACAAGTACAGCAGTTAGTGTGAAAGCAGCAAGGGAGCTTCATCTGGTTCTGACTTCTGATTGGGCTCCCTTAAAATATCCGACTATGAGCTCTAATTTAGTTGTATAGGTTGCAAAAACCAAATTTCAAGAGATAAAAATAACAGTGGAAAACAGTAGTTAAAGAAAGGGCCTGCATCTCATGACAAGATGGTACTGACATGACTGATATTCTTGCTTCTGTTTTCATGTTTTTGTTGAATCGCACATATCCTTCTGTAAAAGAACAAAACTTGTGAAATTCATCCAATTTGAATCTTTACATGAATCTGAAGAGAAATGCTATAATGGCTTTTTTGGCAGGTGGTTATATGCAATTATGATCTTGCTGCTAGCTACTCTGTTTTTCTGCCTCATCTTCCTTCTCCTCCTCCTACTTTTTCATAGGTAAGATTTCTCTTTGCTGAAGACGGACTTCATTTAGCATTGCCTAGCACATTAATTTTGAATTTGTTGGAAGTTTGTTAGATTTATGTTCTTAAAATTATTGTTGGTCCTTCTAAAAATAAGGTTATATGAGATTCTGGAACATCTGTTTGGTCAGCAGAGTTGCTGATTCTTAAGATAATAAACATCTCATGTAAAAAAAAAAAAAGATTTCAGTGTAGGATGCTTAGTTACCTCCTTTCAGTCTTGTGAAGGAGGGAGACACATATTAGAGCTAAGCTATGCAAACTTCATAAGTTGCGAGTGAAACCCTGTTATTTGTGCCTATATTATTCCCCATACTTTTCTTGCTCCTGTAGCTAAAGTGTGTGAACTCATGTTTGTTGAATCAGCTATCTAATTTTGACAAATCAGACCACATATGAGCTTGTGAGACGACGGCGCATCCAGTATTTGAGGTTGGTTATATCCTTCCAATTCTTGTGTGATATTATTTACTGGGTAGTTGCATAGAGATGTCTATGTTGTCTCTTCGAGCCACTACTCTGGATGATATGGTCAAAAACATTGGACTTAGTTGCAGTTATGGTCAACATCTTTGAGTGATTAATTGATATCTCAAAAGCAAATGGAACATGTATTCTCATCAGGAAATTGTCTCGTCTTTAAGCTCAAGTTTAAACTTGCTTTAATTTGCAGGAACATTCCTGAAAGAGTGTATCCATTTAGTAACGGAGCATGCAGAAACTTGTATGAGTTTTGCTGTGCCCAGCGTAGCAAATATAGGATGGAACCGCTGCCAACAGGACAAGAACTTGAAGATAAGTTGAGACCCTACACATGCTCAGATGTTTTATCCTGTC</genome_strand>
        <mrna_strand>GTGATGTANAATGATCAAGCAAAGACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACAGGAACCAGTTGGGAAGTAATCTTCAAGGCCGTGGTACGATAGCGTGGACAAAGCTAGTGATGGATATGTATCCCAGTGGAATGTCTCTTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGTGACTTGCAGTTACTGTAATGTTGTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCACGCGCTAAACATTGTCATGATTGTGACAAATGTGTTCTTCAATTTGATCATCATTGTGTTTGGCTTGGAACATGCATAGGACAGGGTAATCATTGCGCTTTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTACATTTGTGGAGAAACAGCCTTATCCCTTTGGACGGGCACGTTATATATTCAATTCTTGAAGTCTG--ATATA-TCAAAGCCTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTATATGCAATTATGATCTTGCTGCTTGCTACTCTGTTTTTCTGCCTCATCTTCCTTCTCCTCCTCCTACTTTTTCATAG........................................................................................................................................................................................................................................................................................................................................................................................................CTACCTAATTTTGACAAATCAGACCACTTATGAGCTTGTGAGACGACGGCGCATCCAATATTTGAG.................................................................................................................................................................................................................................................GAACATTCCTGAAAGAGTGTATCCATTTAGTAGAGGAGCATGCAGAAATTTGTATGAGTTTTGCTGTGCCCAGCGTAGCACATATAGGATGGAACCACTGNCAACAGGACAAGAACTTGAAGATAAGTTGAGACCCTACACATGCTCAGATGTTTTATCCTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E372765" ref_strand="+" ref_description="SGN-E372765 [TUS-32-J22](-)">
      <seq>gctgttgagagagatcgatctacagttaaggtgtctgaattgtccagacatgggcttatggagattaccaggaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgccatggtacggggagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttgccggttgctatccacaacggatatgaaggcagaccctgaaaaccccaagtcttggcccagatttattctcagggtagatcagtacatgtctaactatttaacttcaggaaagaggacaaggctagcaatcttgagtagttctctcaaagtttggcttcttgtaaaggttgttaaaggttttaccaaagggacctttgagctaaaacctttaacaggcgacaaggagtacaagggtgatgaacgtgaaacatctatttcagtgttgcgaccaacagagggtggatttcacccccctcggaaaaaagtcaccatcttccccatcaaaaagtggagtagtggaaagtgatgttacctccattaagaatcatctgtacaggtctcaaaaaacaatgcaaatccacatatggttagcataaatttattagccaattctttcttccctcttgagtttttctcgtcggcttgtaagaaatagctagttttatgaggaaatcaattttgcatagcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="129245" stop="1576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128945" g_stop="128868" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="128776" g_stop="128657" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="198" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239">
            <donor d_prob="0.550" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128417" g_stop="128262" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="354" r_length="156" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128261" i_stop="128176" i_length="86">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128175" g_stop="127833" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="697" r_length="343" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="127832" i_stop="127141" i_length="692">
            <donor d_prob="0.698" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="127140" g_stop="127130" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="708" r_length="11" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E372765" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128945" e_stop="128868"/>
          <exon e_start="128776" e_stop="128657"/>
          <exon e_start="128417" e_stop="128262"/>
          <exon e_start="128175" e_stop="127833"/>
          <exon e_start="127140" e_stop="127130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTAGTAAGTAAACTAACGGCATCTTGAGATGCCTTTGCAAGGTTATCTTCTTGGATTCCTTACTATCTGTTAAGCTGCAAAAAGGTTGATCCAAAATCTTGTCTTTGGCAAGCTAATCCATTCTTACCACTTGGTCTCCATTTTTCCTCCTCTTCTTTTGGATCTTTCTGAATATAGTTCAACATGATTTGACATAATGACCGCTTTCCCCAAAACTGATTGTTGTTTCTTGTGTTGATCAGTCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAGGTATGCTTAGTCATTTTATCCATTCTCATAACAAAATATCACTTTTATTTCTGTATTTGCTGATTTTGTAAGCTGTGATTAACCAGGTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCATGTACGCATTGATAATACATATTTTCCATTTCTTATCTGCCCTTGCCTTTGTAAACCATAACATAAGATTCATTTATCTCATAATCATGAGCTTTTGCCACACTAATTGTAATTTAGCATGATGCTGAAAATAGTTTTGTGTCTCGTCTTTCATTTCCACTCTTCCTTTCCAAACATAAAGGTCCATAGAGATGGAAAATGAAAAAGCAAAAGTGAACCTCTTCATTCAAGTTCAAAGACGATCCTTTACTTCCGAGCCTCAACCTCACTTGGTAGACTGTCTTAGGAAAAATAATGCATACATTAGCTTTATGTATTATTAGTTTGAGCTTTTAAAAATTGAAAATAATAATTAAATTTCATAAGTTAAAATACGGAAAAGAGTCAAAATTGCCCTTGAACTATGTGAAATAGATTACTTGTACCCTCCGTTACATTTTGGGATCAAAAATACCCCCGCTGTTATCCTAAGAGACCACAAATACCCTCAAAGAGTTTAACACCTCAATTTTTTTAGTGATGTGGCATGCCACATAGGACTTATCCTTCACCTAAGCGTTGTCAACTAGGATTCATTACAAAAGAACTAGACCTTTAGGGCGACAATAGTCGCCACAAAATCCCAAAAAATCGTTACTAAAAGTTTTTAACATCAAATTTTAATTTTGTGTTTTTTTCTTCATTATTTTTTAAAAAAACAAAAA</genome_strand>
        <mrna_strand>GCTGTTGAGAGAGATCGATCTACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA...............................................................................................................................................................................................................................................TCCACAACGGATATGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTGTAAAG......................................................................................GTTGTTAAAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E372927" ref_strand="+" ref_description="SGN-E372927 [TUS-32-J23](-)">
      <seq>attgtccagacatgggcttatggagataccaagaaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgccatggtacggggagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttgccggttgctatccacaacggatctgaaggcagaccctgaaaaccccaagtcttggcccagatttattctcagggtagatcagtacatgtctaactatttaacttcaggaaagaggacaaggctagcaatcttgagtagttctctcaaagtttggcttcttctaaaggttgctagaggttttaccaaagggacctttgagctaaaacctttaacaggcgacaaggagtacaagggtgatgaacgtgaaacatctatttcagtgttgcgaccaacagagggtggatttcacccccctcggaaaaaagtcaccatcttccccatcaaaaagtggagtagtggaaagtgatgttacctccattaagaatcatctgtacaggtctcaaaaaacaatgcaaatccacatatggttagcataaatttattagccaattctttcttccctcttgagtttttctcgtcggcttgtaagaaatagctagttttatgaggaaatcaattttgcatagcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="129207" stop="1576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128907" g_stop="128868" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="0.90"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="128776" g_stop="128657" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="160" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239">
            <donor d_prob="0.550" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128417" g_stop="128262" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="316" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128261" i_stop="128176" i_length="86">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128175" g_stop="127833" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="659" r_length="343" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="127832" i_stop="127141" i_length="692">
            <donor d_prob="0.698" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="127140" g_stop="127130" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="670" r_length="11" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E372927" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372927" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128907" e_stop="128868"/>
          <exon e_start="128776" e_stop="128657"/>
          <exon e_start="128417" e_stop="128262"/>
          <exon e_start="128175" e_stop="127833"/>
          <exon e_start="127140" e_stop="127130"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTAGTAAGTAAACTAACGGCATCTTGAGATGCCTTTGCAAGGTTATCTTCTTGGATTCCTTACTATCTGTTAAGCTGCAAAAAGGTTGATCCAAAATCTTGTCTTTGGCAAGCTAATCCATTCTTACCACTTGGTCTCCATTTTTCCTCCTCTTCTTTTGGATCTTTCTGAATATAGTTCAACATGATTTGACATAATGACCGCTTTCCCCAAAACTGATTGTTGTTTCTTGTGTTGATCAGTCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAGGTATGCTTAGTCATTTTATCCATTCTCATAACAAAATATCACTTTTATTTCTGTATTTGCTGATTTTGTAAGCTGTGATTAACCAGGTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCATGTACGCATTGATAATACATATTTTCCATTTCTTATCTGCCCTTGCCTTTGTAAACCATAACATAAGATTCATTTATCTCATAATCATGAGCTTTTGCCACACTAATTGTAATTTAGCATGATGCTGAAAATAGTTTTGTGTCTCGTCTTTCATTTCCACTCTTCCTTTCCAAACATAAAGGTCCATAGAGATGGAAAATGAAAAAGCAAAAGTGAACCTCTTCATTCAAGTTCAAAGACGATCCTTTACTTCCGAGCCTCAACCTCACTTGGTAGACTGTCTTAGGAAAAATAATGCATACATTAGCTTTATGTATTATTAGTTTGAGCTTTTAAAAATTGAAAATAATAATTAAATTTCATAAGTTAAAATACGGAAAAGAGTCAAAATTGCCCTTGAACTATGTGAAATAGATTACTTGTACCCTCCGTTACATTTTGGGATCAAAAATACCCCCGCTGTTATCCTAAGAGACCACAAATACCCTCAAAGAGTTTAACACCTCAATTTTTTTAGTGATGTGGCATGCCACATAGGACTTATCCTTCACCTAAGCGTTGTCAACTAGGATTCATTACAAAAGAACTAGACCTTTAGGGCGACAATAGTCGCCACAAAATCCCAAAAAATCGTTACTAAAAGTTTTTAACATCAAATTTTAATTTTGTGTTTTTTTCTTCATTATTTTTTAAAAAAACAAAAA</genome_strand>
        <mrna_strand>ATTGTCCAGACATGGGCTTATGGAGATACCAAGAAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA...............................................................................................................................................................................................................................................TCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAG......................................................................................GTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413330" ref_strand="-" ref_description="SGN-E413330 [STM-17-P23]">
      <seq>ggaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgtcatggtacggggagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttgccggttgctatccacaacggatctgaaggcagaccctgaaaaccccaagtcttggcccagatttattctcagggttgatcagtacatgtctaactatttaacttcaggaaagaggacaaggctagctatcttgagtagttctctcaaagtttggcttcttctaaaggttgctagaggttttaccaaagggacctttgagctaaaacctttaacagttgacaaggagtataaggatgatgaacgtgaaacatctatttcagtgttgcgacccacagagggtggatttcacccccctcggagaaaagtcaccatcttccccatcaaaaagtggaagagtagtggaaagtgatcatcttacctcctttaagaatcatctgtacagctctcaattcacaatgcacatccagatacggttagcataattttattagccaattctttcttccctctttgagtttttctcgtcggcttgtaagaaataactagttttgaggaaatcaattttgcatagcagtcaggcctcgcctttgtaagccaaatttagtattn</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="129080" stop="127523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128875" g_stop="128868" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="0.00"/>
            <acceptor a_prob="0.905" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="128776" g_stop="128657" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="128" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239">
            <donor d_prob="0.550" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128417" g_stop="128262" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="284" r_length="156" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="128261" i_stop="128176" i_length="86">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128175" g_stop="127833" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="632" r_length="348" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E413330" ref_strand="-">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413330" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="128875" e_stop="128868"/>
          <exon e_start="128776" e_stop="128657"/>
          <exon e_start="128417" e_stop="128262"/>
          <exon e_start="128175" e_stop="127833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTAGTAAGTAAACTAACGGCATCTTGAGATGCCTTTGCAAGGTTATCTTCTTGGATTCCTTACTATCTGTTAAGCTGCAAAAAGGTTGATCCAAAATCTTGTCTTTGGCAAGCTAATCCATTCTTACCACTTGGTCTCCATTTTTCCTCCTCTTCTTTTGGATCTTTCTGAATATAGTTCAACATGATTTGACATAATGACCGCTTTCCCCAAAACTGATTGTTGTTTCTTGTGTTGATCAGTCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAGGTATGCTTAGTCATTTTATCCATTCTCATAACAAAATATCACTTTTATTTCTGTATTTGCTGATTTTGTAAGCTGTGATTAACCAGGTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGT-G--GAGTAGTGGAAAGTG---ATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTC-TTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCAT</genome_strand>
        <mrna_strand>GGAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGTCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA...............................................................................................................................................................................................................................................TCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTTGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCTATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAG......................................................................................GTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGTTGACAAGGAGTATAAGGATGATGAACGTGAAACATCTATTTCAGTGTTGCGACCCACAGAGGGTGGATTTCACCCCCCTCGGAGAAAAGTCACCATCTTCCCCATCAAAAAGTGGAAGAGTAGTGGAAAGTGATCATCTTACCTCCTTTAAGAATCATCTGTACAGCTCTCAATTCACAATGCACATCCAGATACGGTTAGCATAATTTTATTAGCCAATTCTTTCTTCCCTCTTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAACTAG-TTT-TGAGGAAATCAATTTTGCATAGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E378400" ref_strand="+" ref_description="SGN-E378400 [TUS-32-J23]">
      <seq>catatcatgaggttacaaactatcttctcgaaatggcacctaatctttgtgaaagagttgagttgcatggtacaagaactcccctgtttgatgaatacaacattgaggaagaaataaacaacattctcagcaaaagggttccccttgataatggaggttatttagtgatcgaacagacagaggctttagtctccatcgatgtaaatggtggacattgtgtgcttggtcaagggacttcacaagagatggctattctcaatgttaaccttgcagctgctagacagattgctagggaaataaggctgagagacattggtggcattattgtggtggatttcatagatatgttggatgattcaaataagagattggtctatgaggaggtcaagaaggctgttgagagagatcgatctacagttaaggtgtctgaattgtccagacatgggcttatggagattaccaggaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgccatggtacggggagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttgccggttgctatccacnaacgatctgaaggcagacccctgaaaccccaagtcttggcccagatttattctcagggtagatcagtacatgtctaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="131273" stop="128034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130964" g_stop="130840" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="136" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130839" i_stop="130710" i_length="130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130709" g_stop="130562" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="284" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130561" i_stop="129573" i_length="989">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="129572" g_stop="129500" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="357" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="129499" i_stop="128981" i_length="519">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="128980" g_stop="128868" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="470" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128776" g_stop="128657" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="590" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239">
            <donor d_prob="0.550" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="128417" g_stop="128334" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="674" r_length="84" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E378400" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E378400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130964" e_stop="130840"/>
          <exon e_start="130709" e_stop="130562"/>
          <exon e_start="129572" e_stop="129500"/>
          <exon e_start="128980" e_stop="128868"/>
          <exon e_start="128776" e_stop="128657"/>
          <exon e_start="128417" e_stop="128334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAGGTGGAGATCACTTTGTTTCTTTCTTTTAGCTTTATGTCTTTTATGACATGTATTTTAACTTCTCGTGAGTCAAAACGTTTCATGTTTCATTGATATTCCTCCTTAATCCTTTGATTTATAAAATTTGCAGGGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAGGTATGTAGACCTGCATCTATTTTGATTACACATTGTATTCCAAGAGCATAGTCTTTCTACACCTGGGAAAGTTGGTTATCAGAAAACAAACTAGGATATGCTTAGAAGATCCTTTTTAATGAATTAGAAGATGCTTAGCGTTTGATGGAAATACTTCAATCCAACACTAAAATATGTCTCTTGACAAGCTACACTGCTTCTCTTTTTTCCTGTGGTAGACAAGGCCTCATTTGTAGCCTAGTAGTATCTTGTCAGATCCCAGAACAGAAGAATATTCTGTTGATGCACCTTCTATGGAGAATTAATTCTTTAAAAAAAAGAAACTACACAGGGTATCATGTCCATGTTGCCGTTTTAATCTGCTATTGGTTTGGACATAGCATGTCTGAATTACGTGCTAAACCTCTATTTTTTTTTCTTGGAGGGGATAACCAAGACATCCCTGAGCGTATGTGGATAATGTGCCCGCTCTCTACCTTTCTTCAGTTAAATACCACGCTTTTGTCATAGGAAGGTTCGATCTCTTCACGTGTCTAACCCACACATCACACATTGTGCTCTTACCACTAGACAAAACCAACGGGGATAATCTGTGGTTGCTTTTATGCACCTCTATTTAAGTCGCGTTAATTTGATCCAATTTAGCAGTCAGCCTGGGCTGCAGAATTACACACATTTTTAAAGAAGGAAGGAAGCAGAAACCAATCCAAATAAGCAAGTATCCATCATTCGAATTCAAAGAAATACTGCACTTCTAGTTTCATTGGGTGTTTCTGGTTAGATTTGAACCTTTTATCTGAGAAACCGAGCTAGTTACTGAAATGTACGACAACACAGGATTACATTGGATCTTTTTTGTTGATAAAGACAACATAGTATTGCATTGGTTTTCTTTCTATATGTTAAGTTTATTATTTGCGACAGATTCCCATTTTTTATTTTATCTGATAATTGTTGTCATTTATGTATATACTGAAAATTATTCTCAGATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATTGTAAGTAAACAACCCTCTCTCCGCCCTTTCCCCTCCTCTCTATGTGTGTGTATGTGTCACAGGCGGATCCAAGACTAAATTTGATGAGTTCAACCTTTAAATTCTTAGCACAGAACTGAATGTTCTTCTAAAATTATGATGTGTGTGGTCTTTATGTGGTATTGATGCACAATATTTTGTTTAAATGGGATTACTACTGAAAATAAGAAAGAAAAAAGAAGAGACATAAATTTATATTATGGTCTTCTATGTAAATCTAAAATTGAAGTTAACCTTGTCGAATGCTTGGTAACTAAACGACATTATTTGTAGTACATAACACCTACTGTTCATCATCTAAAACCGGCATGTAATCAGACTGAAAGTTTCGTAATCAGTGCCATCCTACTATGCCTCTCTCTAAACTATATTAGACACTAAGCTCATGCCATATGATTTATAAGATGATAACTTGAAATCGTCAATACATTTTGAAGATGTAGTCCTCTTCTAAGTTTTTTCTTTTATTTTGTTTTCCAGCAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTAGTAAGTAAACTAACGGCATCTTGAGATGCCTTTGCAAGGTTATCTTCTTGGATTCCTTACTATCTGTTAAGCTGCAAAAAGGTTGATCCAAAATCTTGTCTTTGGCAAGCTAATCCATTCTTACCACTTGGTCTCCATTTTTCCTCCTCTTCTTTTGGATCTTTCTGAATATAGTTCAACATGATTTGACATAATGACCGCTTTCCCCAAAACTGATTGTTGTTTCTTGTGTTGATCAGTCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAAC</genome_strand>
        <mrna_strand>GTTACAAACTATCTTCTCGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAG..................................................................................................................................GGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCTACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA...............................................................................................................................................................................................................................................TCCACNAACGATCTGAAGGCAGACCCCTGAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E372766" ref_strand="+" ref_description="SGN-E372766 [TUS-32-J22]">
      <seq>tccaaggacatatcatgaggttacaaactatcttcaagaaatggcacctaatctttgtgaaagagttgagttgcatggtacaagaactcccctgtttgatgaatacaacattgaggaagaaataaacaacattctcagcaaaagggttccccttgataatggaggttatttagtgatcgaacagacagaggctttagtctccatcgatgtaaatggtggacattgtgtgcttggtcaagggacttcacaagagatggctattctcaatgttaaccttgcagctgctagacagattgctagggaaataaggctgagagacattggtggcattattgtggtggatttcatagatatgttggatgattcaaataagagattggtctatgaggaggtcaagaaggctgttgagagagatcgatctacagttaaggtgtctgaattgtccagacatgggcttatggagattaccaggaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgccatggtacggggagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttgccggttgctatccacaacggatctgaaggcagaccctgaaaaccccaagtcttggcccagatttattctcagggtagatcagtacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="131915" stop="128039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131615" g_stop="131597" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131596" i_stop="130965" i_length="632">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130964" g_stop="130840" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="144" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130839" i_stop="130710" i_length="130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130709" g_stop="130562" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="292" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130561" i_stop="129573" i_length="989">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="129572" g_stop="129500" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="365" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="129499" i_stop="128981" i_length="519">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128980" g_stop="128868" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="478" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="128776" g_stop="128657" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="598" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239">
            <donor d_prob="0.550" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="128417" g_stop="128339" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="677" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E372766" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131615" e_stop="131597"/>
          <exon e_start="130964" e_stop="130840"/>
          <exon e_start="130709" e_stop="130562"/>
          <exon e_start="129572" e_stop="129500"/>
          <exon e_start="128980" e_stop="128868"/>
          <exon e_start="128776" e_stop="128657"/>
          <exon e_start="128417" e_stop="128339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGGACATATCATGAGGTATGGACTTAGCCAGTTATCAGTCAATGGAATGAAAAGATTTTTGACCTACAAGCATGATTGCATGTCTTTCTCTTGCTTTAATGTTCCTCTAGGTTGATTTTTCACATGGAAGCGGTTTTACAATAGTGAGTGGTTTTTGGTATGAAGATTTGCATATACTGGCTATGAATGAGATTATCTTGGATTAAATTAAACCCAAGTTAATGAAACATTTAAGAAGTAAAATTAGCTTGTTTAAGAATAGCGCCCAGTGTGTGCAATGATGAGTAGCACTGCAATTAGTATCTCAGTACATTACGTTCTTATGAATAGAACTGATGACATTGATTTTCGTCTTTAAACTATAAGGGCATTTGTGCTTTAAGTTACAAATATTTTCCTTTTTGACTTTAAGTGTCCTGATTCCTTTCGCTTCACACAGTTCAGCATATAGTCGCGGCATAGTGTTCCACAACTTTTGTCGTCTTGTTGTGTCCTCTTTTATTCCAACTCTGCAAAAGTTATTTTGGAGATCTGTCATACACCAAATAGTCGCGGTTTGTGTTCCACTACCTGTGGGCTAAAATTGGTTGAGGAATTTTTTTAAAATTATGGTGTACCTTAATATAGATATATTGGACTCTGTTCAGGTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAGGTGGAGATCACTTTGTTTCTTTCTTTTAGCTTTATGTCTTTTATGACATGTATTTTAACTTCTCGTGAGTCAAAACGTTTCATGTTTCATTGATATTCCTCCTTAATCCTTTGATTTATAAAATTTGCAGGGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAGGTATGTAGACCTGCATCTATTTTGATTACACATTGTATTCCAAGAGCATAGTCTTTCTACACCTGGGAAAGTTGGTTATCAGAAAACAAACTAGGATATGCTTAGAAGATCCTTTTTAATGAATTAGAAGATGCTTAGCGTTTGATGGAAATACTTCAATCCAACACTAAAATATGTCTCTTGACAAGCTACACTGCTTCTCTTTTTTCCTGTGGTAGACAAGGCCTCATTTGTAGCCTAGTAGTATCTTGTCAGATCCCAGAACAGAAGAATATTCTGTTGATGCACCTTCTATGGAGAATTAATTCTTTAAAAAAAAGAAACTACACAGGGTATCATGTCCATGTTGCCGTTTTAATCTGCTATTGGTTTGGACATAGCATGTCTGAATTACGTGCTAAACCTCTATTTTTTTTTCTTGGAGGGGATAACCAAGACATCCCTGAGCGTATGTGGATAATGTGCCCGCTCTCTACCTTTCTTCAGTTAAATACCACGCTTTTGTCATAGGAAGGTTCGATCTCTTCACGTGTCTAACCCACACATCACACATTGTGCTCTTACCACTAGACAAAACCAACGGGGATAATCTGTGGTTGCTTTTATGCACCTCTATTTAAGTCGCGTTAATTTGATCCAATTTAGCAGTCAGCCTGGGCTGCAGAATTACACACATTTTTAAAGAAGGAAGGAAGCAGAAACCAATCCAAATAAGCAAGTATCCATCATTCGAATTCAAAGAAATACTGCACTTCTAGTTTCATTGGGTGTTTCTGGTTAGATTTGAACCTTTTATCTGAGAAACCGAGCTAGTTACTGAAATGTACGACAACACAGGATTACATTGGATCTTTTTTGTTGATAAAGACAACATAGTATTGCATTGGTTTTCTTTCTATATGTTAAGTTTATTATTTGCGACAGATTCCCATTTTTTATTTTATCTGATAATTGTTGTCATTTATGTATATACTGAAAATTATTCTCAGATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATTGTAAGTAAACAACCCTCTCTCCGCCCTTTCCCCTCCTCTCTATGTGTGTGTATGTGTCACAGGCGGATCCAAGACTAAATTTGATGAGTTCAACCTTTAAATTCTTAGCACAGAACTGAATGTTCTTCTAAAATTATGATGTGTGTGGTCTTTATGTGGTATTGATGCACAATATTTTGTTTAAATGGGATTACTACTGAAAATAAGAAAGAAAAAAGAAGAGACATAAATTTATATTATGGTCTTCTATGTAAATCTAAAATTGAAGTTAACCTTGTCGAATGCTTGGTAACTAAACGACATTATTTGTAGTACATAACACCTACTGTTCATCATCTAAAACCGGCATGTAATCAGACTGAAAGTTTCGTAATCAGTGCCATCCTACTATGCCTCTCTCTAAACTATATTAGACACTAAGCTCATGCCATATGATTTATAAGATGATAACTTGAAATCGTCAATACATTTTGAAGATGTAGTCCTCTTCTAAGTTTTTTCTTTTATTTTGTTTTCCAGCAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTAGTAAGTAAACTAACGGCATCTTGAGATGCCTTTGCAAGGTTATCTTCTTGGATTCCTTACTATCTGTTAAGCTGCAAAAAGGTTGATCCAAAATCTTGTCTTTGGCAAGCTAATCCATTCTTACCACTTGGTCTCCATTTTTCCTCCTCTTCTTTTGGATCTTTCTGAATATAGTTCAACATGATTTGACATAATGACCGCTTTCCCCAAAACTGATTGTTGTTTCTTGTGTTGATCAGTCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGT</genome_strand>
        <mrna_strand>TCCAAGGACATATCATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAG..................................................................................................................................GGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCTACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA...............................................................................................................................................................................................................................................TCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E372928" ref_strand="+" ref_description="SGN-E372928 [TUS-32-J23]">
      <seq>tccaaggacatatcatgaggttacaaactatcttcaagaaatggcacctaatctttgtgaaagagttgagttgcatggtacaagaactcccctgtttgatgaatacaacattgaggaagaaataaacaacattctcagcaaaagggttccccttgataatggaggttatttagtgatcgaacagacagaggctttagtctccatcgatgtaaatggtggacattgtgtgcttggtcaagggacttcacaagagatggctattctcaatgttaaccttgcagctgctagacagattgctagggaaataaggctgagagacattggtggcattattgtggtggatttcatagatatgttggatgattcaaataagagattggtctatgaggaggtcaagaaggctgttgagagagatcgatctacagttaaggtgtctgaattgtccagacatgggcttatggagattaccaggaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgccatggtacggngagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttgccggttgctatccacaacggatctgaaagcagaccctgaaaccccaagtcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="131915" stop="128074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131615" g_stop="131597" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131596" i_stop="130965" i_length="632">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130964" g_stop="130840" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="144" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130839" i_stop="130710" i_length="130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130709" g_stop="130562" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="292" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130561" i_stop="129573" i_length="989">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="129572" g_stop="129500" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="365" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="129499" i_stop="128981" i_length="519">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128980" g_stop="128868" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="478" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="128776" g_stop="128657" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="598" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239">
            <donor d_prob="0.550" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="128417" g_stop="128374" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="641" r_length="43" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E372928" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131615" e_stop="131597"/>
          <exon e_start="130964" e_stop="130840"/>
          <exon e_start="130709" e_stop="130562"/>
          <exon e_start="129572" e_stop="129500"/>
          <exon e_start="128980" e_stop="128868"/>
          <exon e_start="128776" e_stop="128657"/>
          <exon e_start="128417" e_stop="128374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGGACATATCATGAGGTATGGACTTAGCCAGTTATCAGTCAATGGAATGAAAAGATTTTTGACCTACAAGCATGATTGCATGTCTTTCTCTTGCTTTAATGTTCCTCTAGGTTGATTTTTCACATGGAAGCGGTTTTACAATAGTGAGTGGTTTTTGGTATGAAGATTTGCATATACTGGCTATGAATGAGATTATCTTGGATTAAATTAAACCCAAGTTAATGAAACATTTAAGAAGTAAAATTAGCTTGTTTAAGAATAGCGCCCAGTGTGTGCAATGATGAGTAGCACTGCAATTAGTATCTCAGTACATTACGTTCTTATGAATAGAACTGATGACATTGATTTTCGTCTTTAAACTATAAGGGCATTTGTGCTTTAAGTTACAAATATTTTCCTTTTTGACTTTAAGTGTCCTGATTCCTTTCGCTTCACACAGTTCAGCATATAGTCGCGGCATAGTGTTCCACAACTTTTGTCGTCTTGTTGTGTCCTCTTTTATTCCAACTCTGCAAAAGTTATTTTGGAGATCTGTCATACACCAAATAGTCGCGGTTTGTGTTCCACTACCTGTGGGCTAAAATTGGTTGAGGAATTTTTTTAAAATTATGGTGTACCTTAATATAGATATATTGGACTCTGTTCAGGTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAGGTGGAGATCACTTTGTTTCTTTCTTTTAGCTTTATGTCTTTTATGACATGTATTTTAACTTCTCGTGAGTCAAAACGTTTCATGTTTCATTGATATTCCTCCTTAATCCTTTGATTTATAAAATTTGCAGGGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAGGTATGTAGACCTGCATCTATTTTGATTACACATTGTATTCCAAGAGCATAGTCTTTCTACACCTGGGAAAGTTGGTTATCAGAAAACAAACTAGGATATGCTTAGAAGATCCTTTTTAATGAATTAGAAGATGCTTAGCGTTTGATGGAAATACTTCAATCCAACACTAAAATATGTCTCTTGACAAGCTACACTGCTTCTCTTTTTTCCTGTGGTAGACAAGGCCTCATTTGTAGCCTAGTAGTATCTTGTCAGATCCCAGAACAGAAGAATATTCTGTTGATGCACCTTCTATGGAGAATTAATTCTTTAAAAAAAAGAAACTACACAGGGTATCATGTCCATGTTGCCGTTTTAATCTGCTATTGGTTTGGACATAGCATGTCTGAATTACGTGCTAAACCTCTATTTTTTTTTCTTGGAGGGGATAACCAAGACATCCCTGAGCGTATGTGGATAATGTGCCCGCTCTCTACCTTTCTTCAGTTAAATACCACGCTTTTGTCATAGGAAGGTTCGATCTCTTCACGTGTCTAACCCACACATCACACATTGTGCTCTTACCACTAGACAAAACCAACGGGGATAATCTGTGGTTGCTTTTATGCACCTCTATTTAAGTCGCGTTAATTTGATCCAATTTAGCAGTCAGCCTGGGCTGCAGAATTACACACATTTTTAAAGAAGGAAGGAAGCAGAAACCAATCCAAATAAGCAAGTATCCATCATTCGAATTCAAAGAAATACTGCACTTCTAGTTTCATTGGGTGTTTCTGGTTAGATTTGAACCTTTTATCTGAGAAACCGAGCTAGTTACTGAAATGTACGACAACACAGGATTACATTGGATCTTTTTTGTTGATAAAGACAACATAGTATTGCATTGGTTTTCTTTCTATATGTTAAGTTTATTATTTGCGACAGATTCCCATTTTTTATTTTATCTGATAATTGTTGTCATTTATGTATATACTGAAAATTATTCTCAGATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATTGTAAGTAAACAACCCTCTCTCCGCCCTTTCCCCTCCTCTCTATGTGTGTGTATGTGTCACAGGCGGATCCAAGACTAAATTTGATGAGTTCAACCTTTAAATTCTTAGCACAGAACTGAATGTTCTTCTAAAATTATGATGTGTGTGGTCTTTATGTGGTATTGATGCACAATATTTTGTTTAAATGGGATTACTACTGAAAATAAGAAAGAAAAAAGAAGAGACATAAATTTATATTATGGTCTTCTATGTAAATCTAAAATTGAAGTTAACCTTGTCGAATGCTTGGTAACTAAACGACATTATTTGTAGTACATAACACCTACTGTTCATCATCTAAAACCGGCATGTAATCAGACTGAAAGTTTCGTAATCAGTGCCATCCTACTATGCCTCTCTCTAAACTATATTAGACACTAAGCTCATGCCATATGATTTATAAGATGATAACTTGAAATCGTCAATACATTTTGAAGATGTAGTCCTCTTCTAAGTTTTTTCTTTTATTTTGTTTTCCAGCAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTAGTAAGTAAACTAACGGCATCTTGAGATGCCTTTGCAAGGTTATCTTCTTGGATTCCTTACTATCTGTTAAGCTGCAAAAAGGTTGATCCAAAATCTTGTCTTTGGCAAGCTAATCCATTCTTACCACTTGGTCTCCATTTTTCCTCCTCTTCTTTTGGATCTTTCTGAATATAGTTCAACATGATTTGACATAATGACCGCTTTCCCCAAAACTGATTGTTGTTTCTTGTGTTGATCAGTCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTG</genome_strand>
        <mrna_strand>TCCAAGGACATATCATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAG..................................................................................................................................GGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCTACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGNGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA...............................................................................................................................................................................................................................................TCCACAACGGATCTGAAAGCAGACCCTG-AAACCCCAAGTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E293957" ref_strand="+" ref_description="SGN-E293957 [cLET-13-D7]">
      <seq>tccaaggacatatcatgaggttacaaactatcttcaagaaatggcacctaatctttgtgaaagagttgagttgcatggtacaagaactcccctgtttgatgaatacaacattgaggaagaaataaacaacattctcagcaaaagggttccccttgataatggaggttatttagtgatcgaacagacagaggctttagtctccatcgatgtaaatggtggacattgtgtgcttggtcaagggacttcacaagagatggctattctcaatgttaaccttgcagctgctagacagattgctagggaaataaggctgagagacattggtggcattattgtggtggatttcatagatatgttggatgattcaaataagagattggtctatgaggaggtcaagaaggctgttgagagagatcgatctacagttaaggtgtctgaattgtccagacatgggcttatggagattaccaggaaaagagttcgacctagtgtgacattcatgatcagtgaaccatgtatgtgctgccatggtacggggagagtggaagctttagcgactgcatactctaagattgaacgtgaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="131915" stop="128367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131615" g_stop="131597" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131596" i_stop="130965" i_length="632">
            <donor d_prob="0.862" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130964" g_stop="130840" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="144" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130839" i_stop="130710" i_length="130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130709" g_stop="130562" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="292" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130561" i_stop="129573" i_length="989">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="129572" g_stop="129500" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="365" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="129499" i_stop="128981" i_length="519">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="128980" g_stop="128868" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="478" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="128776" g_stop="128667" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="588" r_length="110" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E293957" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131615" e_stop="131597"/>
          <exon e_start="130964" e_stop="130840"/>
          <exon e_start="130709" e_stop="130562"/>
          <exon e_start="129572" e_stop="129500"/>
          <exon e_start="128980" e_stop="128868"/>
          <exon e_start="128776" e_stop="128667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGGACATATCATGAGGTATGGACTTAGCCAGTTATCAGTCAATGGAATGAAAAGATTTTTGACCTACAAGCATGATTGCATGTCTTTCTCTTGCTTTAATGTTCCTCTAGGTTGATTTTTCACATGGAAGCGGTTTTACAATAGTGAGTGGTTTTTGGTATGAAGATTTGCATATACTGGCTATGAATGAGATTATCTTGGATTAAATTAAACCCAAGTTAATGAAACATTTAAGAAGTAAAATTAGCTTGTTTAAGAATAGCGCCCAGTGTGTGCAATGATGAGTAGCACTGCAATTAGTATCTCAGTACATTACGTTCTTATGAATAGAACTGATGACATTGATTTTCGTCTTTAAACTATAAGGGCATTTGTGCTTTAAGTTACAAATATTTTCCTTTTTGACTTTAAGTGTCCTGATTCCTTTCGCTTCACACAGTTCAGCATATAGTCGCGGCATAGTGTTCCACAACTTTTGTCGTCTTGTTGTGTCCTCTTTTATTCCAACTCTGCAAAAGTTATTTTGGAGATCTGTCATACACCAAATAGTCGCGGTTTGTGTTCCACTACCTGTGGGCTAAAATTGGTTGAGGAATTTTTTTAAAATTATGGTGTACCTTAATATAGATATATTGGACTCTGTTCAGGTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAGGTGGAGATCACTTTGTTTCTTTCTTTTAGCTTTATGTCTTTTATGACATGTATTTTAACTTCTCGTGAGTCAAAACGTTTCATGTTTCATTGATATTCCTCCTTAATCCTTTGATTTATAAAATTTGCAGGGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAGGTATGTAGACCTGCATCTATTTTGATTACACATTGTATTCCAAGAGCATAGTCTTTCTACACCTGGGAAAGTTGGTTATCAGAAAACAAACTAGGATATGCTTAGAAGATCCTTTTTAATGAATTAGAAGATGCTTAGCGTTTGATGGAAATACTTCAATCCAACACTAAAATATGTCTCTTGACAAGCTACACTGCTTCTCTTTTTTCCTGTGGTAGACAAGGCCTCATTTGTAGCCTAGTAGTATCTTGTCAGATCCCAGAACAGAAGAATATTCTGTTGATGCACCTTCTATGGAGAATTAATTCTTTAAAAAAAAGAAACTACACAGGGTATCATGTCCATGTTGCCGTTTTAATCTGCTATTGGTTTGGACATAGCATGTCTGAATTACGTGCTAAACCTCTATTTTTTTTTCTTGGAGGGGATAACCAAGACATCCCTGAGCGTATGTGGATAATGTGCCCGCTCTCTACCTTTCTTCAGTTAAATACCACGCTTTTGTCATAGGAAGGTTCGATCTCTTCACGTGTCTAACCCACACATCACACATTGTGCTCTTACCACTAGACAAAACCAACGGGGATAATCTGTGGTTGCTTTTATGCACCTCTATTTAAGTCGCGTTAATTTGATCCAATTTAGCAGTCAGCCTGGGCTGCAGAATTACACACATTTTTAAAGAAGGAAGGAAGCAGAAACCAATCCAAATAAGCAAGTATCCATCATTCGAATTCAAAGAAATACTGCACTTCTAGTTTCATTGGGTGTTTCTGGTTAGATTTGAACCTTTTATCTGAGAAACCGAGCTAGTTACTGAAATGTACGACAACACAGGATTACATTGGATCTTTTTTGTTGATAAAGACAACATAGTATTGCATTGGTTTTCTTTCTATATGTTAAGTTTATTATTTGCGACAGATTCCCATTTTTTATTTTATCTGATAATTGTTGTCATTTATGTATATACTGAAAATTATTCTCAGATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATTGTAAGTAAACAACCCTCTCTCCGCCCTTTCCCCTCCTCTCTATGTGTGTGTATGTGTCACAGGCGGATCCAAGACTAAATTTGATGAGTTCAACCTTTAAATTCTTAGCACAGAACTGAATGTTCTTCTAAAATTATGATGTGTGTGGTCTTTATGTGGTATTGATGCACAATATTTTGTTTAAATGGGATTACTACTGAAAATAAGAAAGAAAAAAGAAGAGACATAAATTTATATTATGGTCTTCTATGTAAATCTAAAATTGAAGTTAACCTTGTCGAATGCTTGGTAACTAAACGACATTATTTGTAGTACATAACACCTACTGTTCATCATCTAAAACCGGCATGTAATCAGACTGAAAGTTTCGTAATCAGTGCCATCCTACTATGCCTCTCTCTAAACTATATTAGACACTAAGCTCATGCCATATGATTTATAAGATGATAACTTGAAATCGTCAATACATTTTGAAGATGTAGTCCTCTTCTAAGTTTTTTCTTTTATTTTGTTTTCCAGCAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGAGTATGTTATTTGGTGCTGAATTTCTGTCATAACTACACTAGTGGAAATATCTAATTAATCATGGTTGGTCGTTTCATCTTATACCTGACAGGTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTG</genome_strand>
        <mrna_strand>TCCAAGGACATATCATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAG..................................................................................................................................GGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCTACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA...........................................................................................GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208045" ref_strand="+" ref_description="SGN-E208045 [cLEC-34-I12]">
      <seq>tcattcagagaaatatccagaagaatccagtggaattgggtaccgagggcagaatccaactattgagcgtgctatgaatggtaagagaatttcacaaagagatgaaagcaagtgggtccaggtccgaaaaggcactaaaataattgtgcaagttgttaaagaaggattgggtacgaagggcccaacactgactgcttatccgaaattaaggagcagattctgggttttagttcctcgcggcaacacgataggtatttcaaagaagattgctggtgttgagcgcacacgtttaagggtcattgcaaaaactttacagcctcaaggatatggtcttacagtaaggacagttgcagctggtcattcactaaatgaattgcagaaggacttggaagggttgctttcaacttggaaaagtataattgagcatgcaaagtctgcagctcttgccgcagatgaaggtgttgatggagcagttcctgtcattcttcaccaggcaatgggccaaacactttctgttgttcaagattattttagcgataaggtgaatagtttggtggttgattctccaaggacatatcatgaggttacaaactatcttcaagaaatggcacctaatctttgtgaaagagttgagttgcatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="132702" stop="130605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132402" g_stop="132180" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132179" i_stop="132089" i_length="91">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132088" g_stop="131771" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="541" r_length="318" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131770" i_stop="131639" i_length="132">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131638" g_stop="131597" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="583" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131596" i_stop="130965" i_length="632">
            <donor d_prob="0.862" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130964" g_stop="130905" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="643" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E208045" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132402" e_stop="132180"/>
          <exon e_start="132088" e_stop="131771"/>
          <exon e_start="131638" e_stop="131597"/>
          <exon e_start="130964" e_stop="130905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGGGTATTACATGTTTCATGATCATGTATTCTGTGTCTTACAGCTGAAAGTCCATTATTAGAAAACCCAATCTAATTGGTTCTCCTCTTCCCAGGTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATGCTTCACCAGGCAATGGGCCAAACACTTTCTGTTGTTCAAGATTATTTTAGCGATAAGGTCTGCTCATTCTCGGGTCATTACTTCATAATTTGTTCAGTTCTTTATTTTTTAGGCAACTTCTGTTCATGGGCTTTCTCAAATTAGCATGAAAACACAATTTTACTTTCTTACTCTAGCACTGATTTTCAGGTGAATAGTTTGGTGGTTGATTCTCCAAGGACATATCATGAGGTATGGACTTAGCCAGTTATCAGTCAATGGAATGAAAAGATTTTTGACCTACAAGCATGATTGCATGTCTTTCTCTTGCTTTAATGTTCCTCTAGGTTGATTTTTCACATGGAAGCGGTTTTACAATAGTGAGTGGTTTTTGGTATGAAGATTTGCATATACTGGCTATGAATGAGATTATCTTGGATTAAATTAAACCCAAGTTAATGAAACATTTAAGAAGTAAAATTAGCTTGTTTAAGAATAGCGCCCAGTGTGTGCAATGATGAGTAGCACTGCAATTAGTATCTCAGTACATTACGTTCTTATGAATAGAACTGATGACATTGATTTTCGTCTTTAAACTATAAGGGCATTTGTGCTTTAAGTTACAAATATTTTCCTTTTTGACTTTAAGTGTCCTGATTCCTTTCGCTTCACACAGTTCAGCATATAGTCGCGGCATAGTGTTCCACAACTTTTGTCGTCTTGTTGTGTCCTCTTTTATTCCAACTCTGCAAAAGTTATTTTGGAGATCTGTCATACACCAAATAGTCGCGGTTTGTGTTCCACTACCTGTGGGCTAAAATTGGTTGAGGAATTTTTTTAAAATTATGGTGTACCTTAATATAGATATATTGGACTCTGTTCAGGTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGT</genome_strand>
        <mrna_strand>TCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGG...........................................................................................GTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATTCTTCACCAGGCAATGGGCCAAACACTTTCTGTTGTTCAAGATTATTTTAGCGATAAG....................................................................................................................................GTGAATAGTTTGGTGGTTGATTCTCCAAGGACATATCATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334220" ref_strand="+" ref_description="SGN-E334220 [cTOD-21-F2]">
      <seq>gaaagtggtgatgcttgtgatattttagaagtccttgcagaaaattgtaatggtagtgtaactgagcatgggcttgaaactcattcagagaaatatccagaagaatccagtggaattgggtaccgagggcagaatccaactattgagcgtgctatgaatggtaagagaatttcacaaagagatgaaagcaagtgggtccaggtccgaaaaggcactaaaataattgtgcaagttgttaaagaaggattgggtacgaagggcccaacactgactgcttatccgaaattaaggagcagattctgggttttagttcctcgcggcaacacgataggtatttcaaagaagattgctggtgttgagcgcacacgtttaagggtcattgcaaaaactttacagcctcaaggatatggtcttacagtaaggacagttgcagctggtcattcactaaatgaattgcagaaggacttggaagggttgctttcaacttggaaaagtataattgagcatgcaaagtctgcagctcttgccgcagatgaaggtgttgatggagcagttcctgtcatgcttcaccaggcaatgggcccaacactttctgttgttcaagattattttagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="132782" stop="131476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132482" g_stop="132180" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132179" i_stop="132089" i_length="91">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132088" g_stop="131776" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="616" r_length="313" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E334220" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132482" e_stop="132180"/>
          <exon e_start="132088" e_stop="131776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGTGGTGATGCTTGTGATATTTTAGAAGTCCTTGCAGAAAATTGTAATGGTAGTGTAACTGAGCATGGGCTTGAAACTCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGGGTATTACATGTTTCATGATCATGTATTCTGTGTCTTACAGCTGAAAGTCCATTATTAGAAAACCCAATCTAATTGGTTCTCCTCTTCCCAGGTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATGCTTCACCAGGCAATGGGCCAAACACTTTCTGTTGTTCAAGATTATTTTAGCG</genome_strand>
        <mrna_strand>GAAAGTGGTGATGCTTGTGATATTTTAGAAGTCCTTGCAGAAAATTGTAATGGTAGTGTAACTGAGCATGGGCTTGAAACTCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGG...........................................................................................GTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATGCTTCACCAGGCAATGGGCCCAACACTTTCTGTTGTTCAAGATTATTTTAGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738632" ref_strand="+" ref_description="SGN-E738632 [LC14BF06]">
      <seq>aagagaaattgaaaacccccgtagaaaataggaaggagtggctccttatctttcaagaaccagagttagccgttctctttgctgtccgagaaacagttcgcacgcttggtagttaagttttatgatggctgcttgatgcagcacattatgatttctcaagcactttgtttgttgaattggaagtatcatttgaggtgccttgagttggagaagttgattcagtggatggtcaatttctggagatggttattctcttgtcttgtactgaaatctctagcctatgggagacgtcaaagatactgcattcaagacatttgagctgcaactcttctgtgaagggagatatgtggacttcatctgttgctttatgcaaagctaggcatgatgtctccgtgtcagtaccttctaaacaaagaggaaaacttttcccaaggaacttatggattaaatctcatacaaggatgcctttgggcagcatgtttggatcctggcttgtagaaaggtctatacctatccatctattcgtttcagatcgctctagagatgggaatgttactgtgaaatgcttgaacagcaattcttccatcctaaagcaggtctttagtgattttatagatgaggatagttttttctcagatgagattgatacaacttcagactgtggcaaaagtatttcaactgaacctttgaccattgaagagccatggctatgcgattcttccttgcttcttcatcatttggcagagtctgatgcttctggtgatgtcatttgtgacaacaagattgttgagggtctttgactgtgaaatttagaatcaggattcgtaaatcagtccacacttagtgagactttatgggtcaagtatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="135514" stop="132889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135214" g_stop="135125" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="135124" i_stop="134499" i_length="626">
            <donor d_prob="0.905" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134498" g_stop="134293" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="296" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134292" i_stop="133863" i_length="430">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.705" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133862" g_stop="133616" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="543" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="133615" i_stop="133514" i_length="102">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="133513" g_stop="133189" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="868" r_length="325" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E738632" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738632" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135214" e_stop="135125"/>
          <exon e_start="134498" e_stop="134293"/>
          <exon e_start="133862" e_stop="133616"/>
          <exon e_start="133513" e_stop="133189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGAAATTGAAAACCCCCGTAGAAAATAGGAAGGAGTGGCTCCTTATCTTTCAAGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAGGTAGTACTAGATAACACTGGGAATTTACATATGTTTCTCTTCTTCTTCGTTATTGTTCAATAGCTCTATCAGGTTGTTTTCTTTATCTTCTCTCTTTCTATTTGCAACTTCCCGTTCATTCCGTAATCTTAACTTCTCCTCTATCAGTTGTAAGGCTTTAGTTTTCGGGCGAATTAACTTGCTGCTTGGTTTCCTTCGAGTCTTGTGTTTTAATTTTTCTGAGTTTATGCTATTGAATGCTTATATTGTCTTTCCCTTCATTCTTTTTCTCTGGGGTTCTTCAATTTTCTTGAGGGCTGGCCGCCTGTTGTAGGTGGCGGTAGAAATTCAAGAAAAGATTGTTTGGGGATTCTTTCTTGAATGCAATTGTGATTGGATACTTTATTTGAAGCTATTGGCATATTACATTCGTTGGTTTAGAAGAATTCCCTCCACTTCTGTCATTTAAAAATTAAGTTCTTTGACGACAAAATCAAGAAGGATATGAATTAGTGTATTCATGGGTCACGTATGTCTTTTGTTAAGGGCAAGATGAAGTATATTTCTGTTTTTTGGGTAATTTAACTGTGCTGAGTTAGCATCCTCTGTTCTTATTGGAGTTCTTTTCTTTTTCCTTGTGTTTGCAGAAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAGGTAACCATCTCAATCTAGTGTATACCATTTAAATAGTCATAGGTAAAGAAAATTTCAAAAATTTCCTTTTAGCTATGTCTATTCTTGTTGAAAAGGAAAAGAATAGAATAATATCTAACTAATCTAATCTATTTAATAGAGTTTGATATCAAATCTACAATTCTTAGTTTAGCTGATATTGGATCCCCATATTATATTGCACACACTCAAGATGCCCAGTCCTGGGCATGCGAGGGGAGGGAGGGGGTGTTAGATTTTCCCCATCGGATTTGGATGAGGTACTTGATCTCCTTATATGGTTTTAGACAAGGATCACCTCAAGAGCTAGCTATGTTAAGCTCAAGGTTTATATCTTCTGTAAATGATTTGAGAAATTACTAGATACTTTGTTCATTATCTAGTGCGCCTGAGCTCATGTTGGTCTTAGCAGATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAGGTATTACTTTTATGATAATATTTCTCTGGACAGTTATACTCGGTTGTAGTTTTCTAATTTATGAATTATTTTTGGATATTAAATGCTTCCAGTGAAATGCAGATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCGATTCTTCCTTGCTTCTTCATCATTTGGCAGAGTCTGATGCTTCTGGTGATGTCATTTGTGACAACAAGATTGTTGAGGGTC-TTGACTGTGAAAATTTAGAATCAGGATTCGTAAATCAGTCCACACTTAGTGAGACTTTATGGTCCAAGTATGA</genome_strand>
        <mrna_strand>AAGAGAAATTGAAAACCCCCGTAGAAAATAGGAAGGAGTGGCTCCTTATCTTTCAAGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAG......................................................................................................ATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCGATTCTTCCTTGCTTCTTCATCATTTGGCAGAGTCTGATGCTTCTGGTGATGTCATTTGTGACAACAAGATTGTTGAGGGTCTTTGACTGTG-AAATTTAGAATCAGGATTCGTAAATCAGTCCACACTTAGTGAGACTTTATGGGTCAAGTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736227" ref_strand="+" ref_description="SGN-E736227 [LC04DD07]">
      <seq>cctataaaagaaccagagttagccgttctctttgctgtccgaccttaagacgcacgcttggtagttaagttttatgatggctgcttgatgcagcacattatgatttctcaagcaccctgtatgttgaattggaagtatcatttgaggtgccttgagttggagaagttgattcagtggatggtcaatttctggagatggttattctcttgtcttgtactgaaatctctagcctatgggagacgtcaaagatactgcattcaagacatttgagctgcaactcttctgtgaagggagatatgtggacttcatctgttgctttatgcaaagctaggcatgatgtctccgtgtcagtaccttctaaacaaagaggaaaacttttcccaaggaacttatggattaaatctcatacaaggatgcctttgggcagcatgtttggatcctggcttgtagaaaggtctatacctatccatctattcgtttcagatcgctctagagatgggaatgttactgtgaaatgcttgaacagcaattcttccatcctaaagcaggtctttagtgattttatagatgaggatagttttttctcagatgagattgatacaacttcagactgtggcaaaagtatttcaactgaacctttgaccattgaagagccatggctatgcgattcttccttgcttcttcatcatttggcagagtctgatgcttctggtgatgtcatttgtgacaacaagattgttgagggtcttgactgtgaaaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="135465" stop="132946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135166" g_stop="135125" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.857"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="135124" i_stop="134499" i_length="626">
            <donor d_prob="0.905" d_score="0.86"/>
            <acceptor a_prob="0.992" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134498" g_stop="134293" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="248" r_length="205" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134292" i_stop="133863" i_length="430">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.705" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133862" g_stop="133616" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="495" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="133615" i_stop="133514" i_length="102">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="133513" g_stop="133246" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="763" r_length="268" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E736227" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135166" e_stop="135125"/>
          <exon e_start="134498" e_stop="134293"/>
          <exon e_start="133862" e_stop="133616"/>
          <exon e_start="133513" e_stop="133246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCA-AGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAGGTAGTACTAGATAACACTGGGAATTTACATATGTTTCTCTTCTTCTTCGTTATTGTTCAATAGCTCTATCAGGTTGTTTTCTTTATCTTCTCTCTTTCTATTTGCAACTTCCCGTTCATTCCGTAATCTTAACTTCTCCTCTATCAGTTGTAAGGCTTTAGTTTTCGGGCGAATTAACTTGCTGCTTGGTTTCCTTCGAGTCTTGTGTTTTAATTTTTCTGAGTTTATGCTATTGAATGCTTATATTGTCTTTCCCTTCATTCTTTTTCTCTGGGGTTCTTCAATTTTCTTGAGGGCTGGCCGCCTGTTGTAGGTGGCGGTAGAAATTCAAGAAAAGATTGTTTGGGGATTCTTTCTTGAATGCAATTGTGATTGGATACTTTATTTGAAGCTATTGGCATATTACATTCGTTGGTTTAGAAGAATTCCCTCCACTTCTGTCATTTAAAAATTAAGTTCTTTGACGACAAAATCAAGAAGGATATGAATTAGTGTATTCATGGGTCACGTATGTCTTTTGTTAAGGGCAAGATGAAGTATATTTCTGTTTTTTGGGTAATTTAACTGTGCTGAGTTAGCATCCTCTGTTCTTATTGGAGTTCTTTTCTTTTTCCTTGTGTTTGCAGAAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAGGTAACCATCTCAATCTAGTGTATACCATTTAAATAGTCATAGGTAAAGAAAATTTCAAAAATTTCCTTTTAGCTATGTCTATTCTTGTTGAAAAGGAAAAGAATAGAATAATATCTAACTAATCTAATCTATTTAATAGAGTTTGATATCAAATCTACAATTCTTAGTTTAGCTGATATTGGATCCCCATATTATATTGCACACACTCAAGATGCCCAGTCCTGGGCATGCGAGGGGAGGGAGGGGGTGTTAGATTTTCCCCATCGGATTTGGATGAGGTACTTGATCTCCTTATATGGTTTTAGACAAGGATCACCTCAAGAGCTAGCTATGTTAAGCTCAAGGTTTATATCTTCTGTAAATGATTTGAGAAATTACTAGATACTTTGTTCATTATCTAGTGCGCCTGAGCTCATGTTGGTCTTAGCAGATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAGGTATTACTTTTATGATAATATTTCTCTGGACAGTTATACTCGGTTGTAGTTTTCTAATTTATGAATTATTTTTGGATATTAAATGCTTCCAGTGAAATGCAGATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCGATTCTTCCTTGCTTCTTCATCATTTGGCAGAGTCTGATGCTTCTGGTGATGTCATTTGTGACAACAAGATTGTTGAGGGTCTTGACTGTGAAAATTT</genome_strand>
        <mrna_strand>CCTATAAAAGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAG-ACGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACCCTGTATGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAG......................................................................................................ATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCGATTCTTCCTTGCTTCTTCATCATTTGGCAGAGTCTGATGCTTCTGGTGATGTCATTTGTGACAACAAGATTGTTGAGGGTCTTGACTGTGAAAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E738280" ref_strand="+" ref_description="SGN-E738280 [LC13AC12]">
      <seq>cccttaaggaaggaaaataaaagagaaattgaaaacccccgtagaaaataggaaggagtggctccttatctttcaagaaccagagttagccgttctctttgctgtccgagaaacagttcgcacgcttggtagttaagttttatgatggctgcttgatgcagcacattatgatttctcaagcactttgtttgttgaattggaagtatcatttgaggtgccttgagttggagaagttgattcagtggatggtcaatttctggagatggttattctcttgtcttgtactgaaatctctagcctatgggagacgtcaaagatactgcattcaagacatttgagctgcaactcttctgtgaagggagatatgtggacttcatctgttgctttatgcaaagctaggcatgatgtctccgtgtcagtaccttctaaacaaagaggaaaacttttcccaaggaacttatggattaaatctcatacaaggatgcctttgggcagcatgtttggatcctggcttgtagaaaggtctatacctatccatctattcgtttcagatcgctctagagtgaaatgcagatgggaatgttactgtgaaatgcttgaacagcaattcttccatcctaaagcaggtctttagtgattttatagatgaggatagttttttctcagatgagattgatacaacttcagactgtggcaaaagtatttcaactgaacctttgaccattgaagagccatggctatgcgaattcttccttgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="135529" stop="133028"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135234" g_stop="135125" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="135124" i_stop="134499" i_length="626">
            <donor d_prob="0.905" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134498" g_stop="134293" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="316" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134292" i_stop="133863" i_length="430">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.705" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133862" g_stop="133616" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="563" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="133615" i_stop="133524" i_length="92">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="133523" g_stop="133328" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="760" r_length="197" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E738280" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135234" e_stop="135125"/>
          <exon e_start="134498" e_stop="134293"/>
          <exon e_start="133862" e_stop="133616"/>
          <exon e_start="133523" e_stop="133328"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAAAGGAAGGAAAATAAAAGAGAAATTGAAAACCCCCGTAGAAAATAGGAAGGAGTGGCTCCTTATCTTTCAAGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAGGTAGTACTAGATAACACTGGGAATTTACATATGTTTCTCTTCTTCTTCGTTATTGTTCAATAGCTCTATCAGGTTGTTTTCTTTATCTTCTCTCTTTCTATTTGCAACTTCCCGTTCATTCCGTAATCTTAACTTCTCCTCTATCAGTTGTAAGGCTTTAGTTTTCGGGCGAATTAACTTGCTGCTTGGTTTCCTTCGAGTCTTGTGTTTTAATTTTTCTGAGTTTATGCTATTGAATGCTTATATTGTCTTTCCCTTCATTCTTTTTCTCTGGGGTTCTTCAATTTTCTTGAGGGCTGGCCGCCTGTTGTAGGTGGCGGTAGAAATTCAAGAAAAGATTGTTTGGGGATTCTTTCTTGAATGCAATTGTGATTGGATACTTTATTTGAAGCTATTGGCATATTACATTCGTTGGTTTAGAAGAATTCCCTCCACTTCTGTCATTTAAAAATTAAGTTCTTTGACGACAAAATCAAGAAGGATATGAATTAGTGTATTCATGGGTCACGTATGTCTTTTGTTAAGGGCAAGATGAAGTATATTTCTGTTTTTTGGGTAATTTAACTGTGCTGAGTTAGCATCCTCTGTTCTTATTGGAGTTCTTTTCTTTTTCCTTGTGTTTGCAGAAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAGGTAACCATCTCAATCTAGTGTATACCATTTAAATAGTCATAGGTAAAGAAAATTTCAAAAATTTCCTTTTAGCTATGTCTATTCTTGTTGAAAAGGAAAAGAATAGAATAATATCTAACTAATCTAATCTATTTAATAGAGTTTGATATCAAATCTACAATTCTTAGTTTAGCTGATATTGGATCCCCATATTATATTGCACACACTCAAGATGCCCAGTCCTGGGCATGCGAGGGGAGGGAGGGGGTGTTAGATTTTCCCCATCGGATTTGGATGAGGTACTTGATCTCCTTATATGGTTTTAGACAAGGATCACCTCAAGAGCTAGCTATGTTAAGCTCAAGGTTTATATCTTCTGTAAATGATTTGAGAAATTACTAGATACTTTGTTCATTATCTAGTGCGCCTGAGCTCATGTTGGTCTTAGCAGATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAGGTATTACTTTTATGATAATATTTCTCTGGACAGTTATACTCGGTTGTAGTTTTCTAATTTATGAATTATTTTTGGATATTAAATGCTTCCAGTGAAATGCAGATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCG-ATTCTTCCTTGCTTC</genome_strand>
        <mrna_strand>CCCTTAAGGAAGGAAAATAAAAGAGAAATTGAAAACCCCCGTAGAAAATAGGAAGGAGTGGCTCCTTATCTTTCAAGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAG............................................................................................TGAAATGCAGATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCGAATTCTTCCTTGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E487904" ref_strand="+" ref_description="SGN-E487904 [cSTE-26-N12]">
      <seq>cagaatcggttcagacgcttggtagttaagttttattatggctgcttgatgcagcgcattatgatttctcaagcatttcgtttgttgaattggaagtatcatttgaggtgcgttgagttggagaagttgattcagtggatggtccatttctggagatggttattctcttgtcttgtactgaactctctagcctatgggagacgtcaaagcagatactgcattcaggacatttgagctgcaacttttctgtgaagggagatatgttgacttcatctgttgctttatgcaaagctaggcatgatgtccctgtgttagtaccttctaaacaaagaggaaaacttttcccaaggaacttatggattaaatctcatacaaggatgcctttgggtagcatgtttggatcctggctagtagaaaggtttatacctatgcgtctattcattccagctcgcactagagatgggaatgttactgtgaagtgcttgaacagcaattcttccatcctaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="134801" stop="133164"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134501" g_stop="134293" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134292" i_stop="133866" i_length="427">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="133865" g_stop="133616" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="459" r_length="250" r_score="0.940"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="133615" i_stop="133514" i_length="102">
            <donor d_prob="0.978" d_score="0.84"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133513" g_stop="133464" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="509" r_length="50" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E487904" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E487904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134501" e_stop="134293"/>
          <exon e_start="133865" e_stop="133616"/>
          <exon e_start="133513" e_stop="133464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAGGTAACCATCTCAATCTAGTGTATACCATTTAAATAGTCATAGGTAAAGAAAATTTCAAAAATTTCCTTTTAGCTATGTCTATTCTTGTTGAAAAGGAAAAGAATAGAATAATATCTAACTAATCTAATCTATTTAATAGAGTTTGATATCAAATCTACAATTCTTAGTTTAGCTGATATTGGATCCCCATATTATATTGCACACACTCAAGATGCCCAGTCCTGGGCATGCGAGGGGAGGGAGGGGGTGTTAGATTTTCCCCATCGGATTTGGATGAGGTACTTGATCTCCTTATATGGTTTTAGACAAGGATCACCTCAAGAGCTAGCTATGTTAAGCTCAAGGTTTATATCTTCTGTAAATGATTTGAGAAATTACTAGATACTTTGTTCATTATCTAGTGCGCCTGAGCTCATGTTGGTCTTAGCAGATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAGGTATTACTTTTATGATAATATTTCTCTGGACAGTTATACTCGGTTGTAGTTTTCTAATTTATGAATTATTTTTGGATATTAAATGCTTCCAGTGAAATGCAGATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAG</genome_strand>
        <mrna_strand>CAGAATCGGTTCAGACGCTTGGTAGTTAAGTTTTATTATGGCTGCTTGATGCAGCGCATTATGATTTCTCAAGCATTTCGTTTGTTGAATTGGAAGTATCATTTGAGGTGCGTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCCATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAACTCTCTAGCCTATGGGAGACGTCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATACTGCATTCAGGACATTTGAGCTGCAACTTTTCTGTGAAGGGAGATATGTTGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCCCTGTGTTAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGTAGCATGTTTGGATCCTGGCTAGTAGAAAGGTTTATACCTATGCGTCTATTCATTCCAGCTCGCACTAGAG......................................................................................................ATGGGAATGTTACTGTGAAGTGCTTGAACAGCAATTCTTCCATCCTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472034" ref_strand="+" ref_description="SGN-E472034 [cSTB-27-A10]">
      <seq>ataacacagaatcggttcagaggcttggtagttaagttttattatggctgcttgatgcagcgcattatgatttctcaagcatttcgtttgttgaattggaagtatcatttgaggtgcgttgagttggagaagttgattcagtggatggtccatttctggagatggttattctcttgtcttgtactgaactctctagcctatgggagacgtcaaagatactgcattcaggacatttgagctgcaactcttctgtgaagggagatatgttgacttcatctgttgctttatgcaaagctaggcatgatgtccctgtgttagtaccttctaaacaaagaggaaaacttttcccaaggaacttatggattaaatctcatacaaggatgcctttgggtagcatgtttggatcctggctagtagaaaggtctataccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="134801" stop="133346"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134498" g_stop="134293" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="215" r_length="206" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134292" i_stop="133863" i_length="430">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.705" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="133862" g_stop="133646" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="432" r_length="217" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E472034" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134498" e_stop="134293"/>
          <exon e_start="133862" e_stop="133646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAGGTAACCATCTCAATCTAGTGTATACCATTTAAATAGTCATAGGTAAAGAAAATTTCAAAAATTTCCTTTTAGCTATGTCTATTCTTGTTGAAAAGGAAAAGAATAGAATAATATCTAACTAATCTAATCTATTTAATAGAGTTTGATATCAAATCTACAATTCTTAGTTTAGCTGATATTGGATCCCCATATTATATTGCACACACTCAAGATGCCCAGTCCTGGGCATGCGAGGGGAGGGAGGGGGTGTTAGATTTTCCCCATCGGATTTGGATGAGGTACTTGATCTCCTTATATGGTTTTAGACAAGGATCACCTCAAGAGCTAGCTATGTTAAGCTCAAGGTTTATATCTTCTGTAAATGATTTGAGAAATTACTAGATACTTTGTTCATTATCTAGTGCGCCTGAGCTCATGTTGGTCTTAGCAGATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTA</genome_strand>
        <mrna_strand>AATCGGTTCAGAGGCTTGGTAGTTAAGTTTTATTATGGCTGCTTGATGCAGCGCATTATGATTTCTCAAGCATTTCGTTTGTTGAATTGGAAGTATCATTTGAGGTGCGTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCCATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAACTCTCTAGCCTATGGGAGACGTCAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGCATTCAGGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTTGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCCCTGTGTTAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGTAGCATGTTTGGATCCTGGCTAGTAGAAAGGTCTATACCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349103" ref_strand="+" ref_description="SGN-E349103 [cTOS-2-H11]">
      <seq>tacattcaggtatcaagtttgatgaatcagatggtgaagaagagatgggaactcacgaattcagtagaggaaccaatcgagcccctaaccgtcctgcacctcatgtgcctcgggttcatcccaatttacctgactacgacaaacttactgctcgcttcgagtctctcaagtcccagaaatctcgtcgcacctagattatccaaggttcatgaagtcagatacattttgtgccagtccaatattattgtatacagtacagaaaccaaatgatatgttaaaaatggttcatttatagtaggtcatttcgtggagttcacttattgcctttgtgttgactttacaaatttgggtgtaataaatcttggatattccttttacaaggttggtcagtggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="136935" stop="135940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136635" g_stop="136240" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="396" r_length="396" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E349103" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>396</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136635" e_stop="136240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAACCAAATGATATGTTAAAAATGGTTCATTTATAGTAGGTCATTTCGTGGAGTTCACTTATTGCCTTTGTGTTGACTTTACAAATTTGGGTGTAATAAATCTTGGATATTCCTTTTACAAGGTTGTTCAGTGGATC</genome_strand>
        <mrna_strand>TACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAACCAAATGATATGTTAAAAATGGTTCATTTATAGTAGGTCATTTCGTGGAGTTCACTTATTGCCTTTGTGTTGACTTTACAAATTTGGGTGTAATAAATCTTGGATATTCCTTTTACAAGGTTGGTCAGTGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E349516" ref_strand="+" ref_description="SGN-E349516 [cTOS-1-A12]">
      <seq>acagctacaatgttccatcagtacattcaggtatcaagtttgatgaatcagatggtgaagaagagatgggaactcacgaattcagtagaggaaccaatcgagcccctaaccgtcctgcacctcatgtgcctcgggttcatcccaatttacctgactacgacaaacttactgctcgcttcgagtctctcaagtcccagaaatctcgtcgcacctagattatccaaggttcatgaagtcagatacattttgtgccagtccaatattattgtatacagtacagaaaccaaatgatatgttaaaaatggttcatttatagtaggtcatttcgtggagttcacttattgcctttgtgttgactttacaaatttgggtgtaataaatcttggatattccttttacaaggttgttcagtggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="136956" stop="135942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136656" g_stop="136243" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="415" polyA_stop="424"/>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E349516" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349516" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136656" e_stop="136243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGCTACAATGTTCCATCAGTACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAACCAAATGATATGTTAAAAATGGTTCATTTATAGTAGGTCATTTCGTGGAGTTCACTTATTGCCTTTGTGTTGACTTTACAAATTTGGGTGTAATAAATCTTGGATATTCCTTTTACAAGGTTGTTCAGTGG</genome_strand>
        <mrna_strand>ACAGCTACAATGTTCCATCAGTACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAACCAAATGATATGTTAAAAATGGTTCATTTATAGTAGGTCATTTCGTGGAGTTCACTTATTGCCTTTGTGTTGACTTTACAAATTTGGGTGTAATAAATCTTGGATATTCCTTTTACAAGGTTGTTCAGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E436564" ref_strand="+" ref_description="SGN-E436564 [STM-63-M21]">
      <seq>ttttttttttattacaccaatatttataaactcgacacaaagggaagaagtgatctccacgaaatgatgctacaccatttttaacatatcatttggtttctgtactgtatacaataatattagactggcacaaaatgtatctgactccatgaaccctggatatctaggtacgacgagatttctgggacttgagagactcaaagcgagcagtaagcttgtcatagtcaggtaaattgggatgaacccgaggcacatgaggtgcaggacggttaggggctcgattggttcctctagtgaattcttgagtttccatctcttcttcaccatctgattcatcaaacttgatacctgaatgtgctgatggaacattgtagctgtgccttctgtagaacttcccaccatcagtatcagttggtgggctgggtttatatgtcccacttgggggatcttccatctcgatttcctcatcgcaatctgaatcatcatactgaacattatgatttgaggatggaacattatagctatgtctcctatcaaacttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="136051" stop="137121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136270" g_stop="136821" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E436564" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.017" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E436564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136270" e_stop="136821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGATTTATTACACCCAAATTTGTAAAGTCAACACAAAGGCAATAAGTGAACTCCACGAAATGACCTACTATAAATGAACCATTTTTAACATATCATTTGGTTTCTGTACTGTATACAATAATATTGGACTGGCACAAAATGTATCTGACTTCATGAACCTTGGATAATCTAGGTGCGACGAGATTTCTGGGACTTGAGAGACTCGAAGCGAGCAGTAAGTTTGTCGTAGTCAGGTAAATTGGGATGAACCCGAGGCACATGAGGTGCAGGACGGTTAGGGGCTCGATTGGTTCCTCTACTGAATTCGTGAGTTCCCATCTCTTCTTCACCATCTGATTCATCAAACTTGATACCTGAATGTACTGATGGAACATTGTAGCTGTGCCTTCTGTAGAACTTCCCACCATCAATATCAGTTGGTGGGCTGGGTTTATATGTCCCACTCGGCGGATCTTCCATCTCGATTTCCTCATCACAGTCTGAATCATCATACTGAACATTACGATTTGAGGATGGAACATTATAGCTATGTCTCCTGTCGAACTTCT</genome_strand>
        <mrna_strand>TTTTTTTTTTATTACACCAATATTTATAAACTCGACACAAAGGGAAGAAGTGATCTCCACGAAATGA--TGC--TA-C---ACCATTTTTAACATATCATTTGGTTTCTGTACTGTATACAATAATATTAGACTGGCACAAAATGTATCTGACTCCATGAACCCTGGAT-ATCTAGGTACGACGAGATTTCTGGGACTTGAGAGACTCAAAGCGAGCAGTAAGCTTGTCATAGTCAGGTAAATTGGGATGAACCCGAGGCACATGAGGTGCAGGACGGTTAGGGGCTCGATTGGTTCCTCTAGTGAATTCTTGAGTTTCCATCTCTTCTTCACCATCTGATTCATCAAACTTGATACCTGAATGTGCTGATGGAACATTGTAGCTGTGCCTTCTGTAGAACTTCCCACCATCAGTATCAGTTGGTGGGCTGGGTTTATATGTCCCACTTGGGGGATCTTCCATCTCGATTTCCTCATCGCAATCTGAATCATCATACTGAACATTATGATTTGAGGATGGAACATTATAGCTATGTCTCCTATCAAACTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347211" ref_strand="+" ref_description="SGN-E347211 [cTOF-25-D1]">
      <seq>tcaaatcgtaatgttcagtatgatgattcagactgtgatgaggaaatcgagatggaagatccgccgagtgggacatataaacccagcccaccaactgatattgatggtgggaagttctacagaaggcacagctacaatgttccatcagtacattcaggtatcaagtttgatgaatcagatggtgaagaagagatgggaactcacgaattcagtagaggaaccaatcgagcccctaaccgtcctgcacctcatgtgcctcgggttcatcccaatttacctgactacgacaaacttactgctcgcttcgagtctctcaagtcccagaaatctcgtcgcacctagattatccaaggttcatgaagtcagatacattttgtgccagtccaatattattgtatacagtacagaaaccaaatgatatgttaaaaatggttcatttatagtaggtcatttcgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="137083" stop="136025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136783" g_stop="136325" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="459" r_length="459" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E347211" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347211" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136783" e_stop="136325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATCGTAATGTTCAGTATGATGATTCAGACTGTGATGAGGAAATCGAGATGGAAGATCCGCCGAGTGGGACATATAAACCCAGCCCACCAACTGATATTGATGGTGGGAAGTTCTACAGAAGGCACAGCTACAATGTTCCATCAGTACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAACCAAATGATATGTTAAAAATGGTTCATTTATAGTAGGTCATTTCGTGGA</genome_strand>
        <mrna_strand>TCAAATCGTAATGTTCAGTATGATGATTCAGACTGTGATGAGGAAATCGAGATGGAAGATCCGCCGAGTGGGACATATAAACCCAGCCCACCAACTGATATTGATGGTGGGAAGTTCTACAGAAGGCACAGCTACAATGTTCCATCAGTACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAACCAAATGATATGTTAAAAATGGTTCATTTATAGTAGGTCATTTCGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E436563" ref_strand="+" ref_description="SGN-E436563 [STM-63-M21]">
      <seq>ggagaattgaaagttgccaaatttgatgacccagcttcagctgctaaagcagctgctgaatctgccaagcaagcaattgctgcagctgaagcagctgcatatctggccagtaaagatgcaaaagcatcttctgctggttgtcacaactctaggaacaatgcaactgttgacaatatccctttcatttctggtgctcaggctcccaagttctcgcaaactgaagtggcaccaccttctcagtccatagttgatctgtatgatatgcactggagtagtaagaacatcaggaattctgaaaattcgcatagttctgctggtgaagagatgccattagatatgaaaagatcacagaagtttgataggagacatagctataatgttccatcctcaaatcataatgttcagtatgatgattcagattgcgatgaggaaatcgagatggaagatcccccaagtgggacatataaacccagcccaccaactgatactgatggtgggaagttctacagaaggcacagctacaatgttccatcagcacattcaggtatcaagtttgatgaatcagatggtgaagaagagatggaaactcaagaattcactagaggaaccaatcgagcccctaaccgtcctgcacctcatgtgcctcgggttcatcccaatttacctgactatgacaagcttactgctcgctttgagtctctcaagtcccagaaatctcgtcgtacctagatatccagggttcatggagtcagatacattttgtggcagtctaatattattgtatacagtacagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="137470" stop="136074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137170" g_stop="136374" g_length="797"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="796" r_length="796" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E436563" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137170" e_stop="136374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCGGAAGTTGCCAAATTTGATGACCCAGCTTCAGCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCAGCTGCTGAAGCAGCTGCATATCTAGCCAGTAAAGACGCAAAAGCATCTTCTGCTGGTTGTCACTACTCTCCGAAGAATGCAACTGCTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGTTCTCGCAAATTGAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTTTATGATATGCACTGGAGTAGTAAGAACATCAGGAATTCCGAAAATTCTCATAGTTCTGCTGGTGAAGAGATGCCATTAGATATGAAAAGATCACAGAAGTTCGACAGGAGACATAGCTATAATGTTCCATCCTCAAATCGTAATGTTCAGTATGATGATTCAGACTGTGATGAGGAAATCGAGATGGAAGATCCGCCGAGTGGGACATATAAACCCAGCCCACCAACTGATATTGATGGTGGGAAGTTCTACAGAAGGCACAGCTACAATGTTCCATCAGTACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAA</genome_strand>
        <mrna_strand>GGAGAATTGAAAGTTGCCAAATTTGATGACCCAGCTTCAGCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCTGCAGCTGAAGCAGCTGCATATCTGGCCAGTAAAGATGCAAAAGCATCTTCTGCTGGTTGTCACAACTCTAGGAACAATGCAACTGTTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGTTCTCGCAAACTGAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTGTATGATATGCACTGGAGTAGTAAGAACATCAGGAATTCTGAAAATTCGCATAGTTCTGCTGGTGAAGAGATGCCATTAGATATGAAAAGATCACAGAAGTTTGATAGGAGACATAGCTATAATGTTCCATCCTCAAATCATAATGTTCAGTATGATGATTCAGATTGCGATGAGGAAATCGAGATGGAAGATCCCCCAAGTGGGACATATAAACCCAGCCCACCAACTGATACTGATGGTGGGAAGTTCTACAGAAGGCACAGCTACAATGTTCCATCAGCACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGAAACTCAAGAATTCACTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTATGACAAGCTTACTGCTCGCTTTGAGTCTCTCAAGTCCCAGAAATCTCGTCGTACCTAGA-TATCCAGGGTTCATGGAGTCAGATACATTTTGTGGCAGTCTAATATTATTGTATACAGTACAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E461068" ref_strand="+" ref_description="SGN-E461068 [cPRO-34-O7]">
      <seq>ggagaattgaaagttgccaaatttgatgacccagcttcagctgctaaagcagctgctgaatctgccaagcaagcaattgctgcagctgaagcagctgcatatctggccagtaaagatgcaaaagcatcttctgctggttgtcacaactctaggaacaatgcaactgttgacaatatccctttcatttctggtgctcaggctcccaagttctcgcaaactgaagtggcaccaccttctcagtccatagttgatctgtatgatatgcactggagtagtaagaacatcaggaattctgaaaattcgcatagttctgctggtgaagagatgccattagatatgaaaagatcacagaagtttgataggagacatagctataatgttccatcctcaaatcataatgttcagtatgatgattcagattgcgatgaggaaatcgagatggaagatcccccaagtgggacatataaacccagcccaccaactgatactgatggtgggaagttctacagaaggcacagctacaatgttccatcagcacattcaggtatcaagtttgatgaatcagatggtgaagaagagatggaaactcaagaattcactagaggaaccaatcgagcccctaaccgtcctgcacctcatgtgcctcgggttcatcccaatttacctgactatgacaagcttactgctcgctttgagtctctcaagtcccagaaatctcgtcgtacctagatatccagggttcatggagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="137470" stop="136120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137170" g_stop="136420" g_length="751"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="750" r_length="750" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E461068" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E461068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137170" e_stop="136420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGAATCGGAAGTTGCCAAATTTGATGACCCAGCTTCAGCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCAGCTGCTGAAGCAGCTGCATATCTAGCCAGTAAAGACGCAAAAGCATCTTCTGCTGGTTGTCACTACTCTCCGAAGAATGCAACTGCTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGTTCTCGCAAATTGAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTTTATGATATGCACTGGAGTAGTAAGAACATCAGGAATTCCGAAAATTCTCATAGTTCTGCTGGTGAAGAGATGCCATTAGATATGAAAAGATCACAGAAGTTCGACAGGAGACATAGCTATAATGTTCCATCCTCAAATCGTAATGTTCAGTATGATGATTCAGACTGTGATGAGGAAATCGAGATGGAAGATCCGCCGAGTGGGACATATAAACCCAGCCCACCAACTGATATTGATGGTGGGAAGTTCTACAGAAGGCACAGCTACAATGTTCCATCAGTACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTC</genome_strand>
        <mrna_strand>GGAGAATTGAAAGTTGCCAAATTTGATGACCCAGCTTCAGCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCTGCAGCTGAAGCAGCTGCATATCTGGCCAGTAAAGATGCAAAAGCATCTTCTGCTGGTTGTCACAACTCTAGGAACAATGCAACTGTTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGTTCTCGCAAACTGAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTGTATGATATGCACTGGAGTAGTAAGAACATCAGGAATTCTGAAAATTCGCATAGTTCTGCTGGTGAAGAGATGCCATTAGATATGAAAAGATCACAGAAGTTTGATAGGAGACATAGCTATAATGTTCCATCCTCAAATCATAATGTTCAGTATGATGATTCAGATTGCGATGAGGAAATCGAGATGGAAGATCCCCCAAGTGGGACATATAAACCCAGCCCACCAACTGATACTGATGGTGGGAAGTTCTACAGAAGGCACAGCTACAATGTTCCATCAGCACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGAAACTCAAGAATTCACTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTATGACAAGCTTACTGCTCGCTTTGAGTCTCTCAAGTCCCAGAAATCTCGTCGTACCTAGA-TATCCAGGGTTCATGGAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E619517" ref_strand="+" ref_description="SGN-E619517 [70208]">
      <seq>caacgttgttctcttcttcactaccattctcacacacactcttctcattgcttcactctctctttctcttttaagaagaaaatgacagtagcaaacgctgccaccaagcactgcaagaaggccatgaagatgggtctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggcaaagatgacggtggcgagaataaaattgctgagaaacaagagggaggtggttgtgaggcaaatgaggagagacattgctatgcttcttgaatcccgtcaggatgccactgctcgtattcgggtcgaacatgtaataagggaacaaaatatattgcaagcaaatgagatcctcgagctcttctgtgaactaattgtggctagactaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgatttttgctgccccaaggtgctcagatattccagaattgatgggaattaaagacgtttttgagaagaaatatggaaaagattttgtttcagcagcgactgacctgcgacccaacgctggtgtaaaccggacgctcattgaaaagctctctgtgaaaactccaagtggtgaagtcaaactaaaaatcatgaaagaaatagccaaggaataccaggttgaatgggacaccgcagattcagagatggagcttctcaagccaccagaagagcgtatagaaggaccaaatggctttgtaagtgccactagcttacccctgaagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139831" stop="137034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139531" g_stop="139359" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="306" r_length="133" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="137983" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="410" r_length="104" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137894" g_stop="137723" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="582" r_length="172" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="137722" i_stop="137612" i_length="111">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.535" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137611" g_stop="137471" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="723" r_length="141" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="137470" i_stop="137381" i_length="90">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="137380" g_stop="137334" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="770" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E619517" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E619517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139531" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="137983"/>
          <exon e_start="137894" e_stop="137723"/>
          <exon e_start="137611" e_stop="137471"/>
          <exon e_start="137380" e_stop="137334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTCTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACGGTAATCATATTTCTTCTCTTGAAACTTGTGGTTCTCTTTATCATAATAAATATATCTATATTTATGTGCTTGGGAGAGGGGTCTAAGAGAAGTGGGTAATTGTTGCTACAGCTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAAGTCAAACTAAAAATCATGAAAGAAATAGCCAAAGAATACCAGGTTGAATGGGACACCGCAGATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATAGTGTGTCTCTATCTCAAATCCATCTATATCTGAATATGATGCCTAACGTGTTAGATGACCATCTAACTAGCAACTATTCTCTTTGATCAGGAAGGACCAAATGGCTTTGTAAGTGCCACTAGCTTACCCCTGAAGCC</genome_strand>
        <mrna_strand>CAACGTTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATTGCTTCACTCTCTCTTTCTCTTTTAAGAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCAAAGATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGAGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTCGTATTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGGGAACAAAATATATTGCAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTAATTGTGGCTAGACTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTTGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATTAAAGACGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAACGCTGGTGTAAACCGGACG...............................................................................................................CTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAAGTCAAACTAAAAATCATGAAAGAAATAGCCAAGGAATACCAGGTTGAATGGGACACCGCAGATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATA..........................................................................................GAAGGACCAAATGGCTTTGTAAGTGCCACTAGCTTACCCCTGAAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E717419" ref_strand="+" ref_description="SGN-E717419 [FC01AF12]">
      <seq>cgattggcggccaatcggccgaattggaaacgaccgttacacatacaactctgttctcttcttcactaccattctcacacacactcttctcatcgcttcactctctctctctcttttaacaagaaaatgacagtagcaaacgctgccaccaagcactgcaagaaggccatgaagatgggtctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggcaaaaatgacggtggcgagaataaaattgctgagaaacaagagggaggtggttgtgcggcaaatgaggagagacattgctatgcttcttgaatcccatcaggatgccactgctcgtattagggtcgaacatgtaataagagaacaaaatatattacaagcaaatgagatcctcgagctcttctgtgaacttattgtggctaggttaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgattttcgctgccccaaggtgctcagatattccagaattgatgggaatcaaagatgtttttgagaagaaatatggaaaagattttgtttcagcagcgactgacctgcgacccaatgctggtgtaaaccggacgctcattgaaaagctctctgtgaaaactccaagtggtgaagtcaaactaaaaatcatgaaagaaatagccaaagaataccaggttgaatgggacaccgcagattcagagatggagcttctcaagccaccagaagagcgtatagaaggaccaaatggctttgtaagtgccact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139850" stop="137051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139550" g_stop="139359" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="218" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="351" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="137983" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="455" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137894" g_stop="137723" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="627" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="137722" i_stop="137612" i_length="111">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.535" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137611" g_stop="137471" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="768" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="137470" i_stop="137381" i_length="90">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="137380" g_stop="137351" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="769" r_stop="798" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E717419" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139550" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="137983"/>
          <exon e_start="137894" e_stop="137723"/>
          <exon e_start="137611" e_stop="137471"/>
          <exon e_start="137380" e_stop="137351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACGACCGTTACACATACAACTCTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACGGTAATCATATTTCTTCTCTTGAAACTTGTGGTTCTCTTTATCATAATAAATATATCTATATTTATGTGCTTGGGAGAGGGGTCTAAGAGAAGTGGGTAATTGTTGCTACAGCTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAAGTCAAACTAAAAATCATGAAAGAAATAGCCAAAGAATACCAGGTTGAATGGGACACCGCAGATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATAGTGTGTCTCTATCTCAAATCCATCTATATCTGAATATGATGCCTAACGTGTTAGATGACCATCTAACTAGCAACTATTCTCTTTGATCAGGAAGGACCAAATGGCTTTGTAAGTGCCACT</genome_strand>
        <mrna_strand>GAAACGACCGTTACACATACAACTCTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACG...............................................................................................................CTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAAGTCAAACTAAAAATCATGAAAGAAATAGCCAAAGAATACCAGGTTGAATGGGACACCGCAGATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATA..........................................................................................GAAGGACCAAATGGCTTTGTAAGTGCCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313784" ref_strand="+" ref_description="SGN-E313784 [cTOA-17-F22]">
      <seq>tcttcttcactaccattctcacacacactctggtcatcggttcactctctctctctcttttaacaagaaaatgacagtagcaaacgctgccaccaagcactgcaagaaggccatgaagatgggtctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggcaaaaatgacggtggcgagaataaaattgctgagaaacaagagggaggtggttgtgcggcaaatgaggagagacattgctatgcttcttgaatcccatcaggatgccactgctcgtattagggtcgaacatgtaataagagaacaaaatatattacaagcaaatgagatcctcgagctcttctgtgaacttattgtggctaggttaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgattttcgctgccccaaggtgctcagatattccagaattgatgggaatcaaagatgtttttgagaagaaatatggaaaagattttgtttcagcagcgactgacctgcgacccaatgctggtgtaaaccggacgctcattgaaaagctctctgtgaaaactccaagtggtgaagtcaaactaaaaatcatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139820" stop="137253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139520" g_stop="139359" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="295" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="137983" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="399" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137894" g_stop="137723" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="571" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="137722" i_stop="137612" i_length="111">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.535" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137611" g_stop="137553" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="630" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E313784" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139520" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="137983"/>
          <exon e_start="137894" e_stop="137723"/>
          <exon e_start="137611" e_stop="137553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACGGTAATCATATTTCTTCTCTTGAAACTTGTGGTTCTCTTTATCATAATAAATATATCTATATTTATGTGCTTGGGAGAGGGGTCTAAGAGAAGTGGGTAATTGTTGCTACAGCTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAAGTCAAACTAAAAATCATGAA</genome_strand>
        <mrna_strand>TCTTCTTCACTACCATTCTCACACACACTCTGGTCATCGGTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACG...............................................................................................................CTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAAGTCAAACTAAAAATCATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E304335" ref_strand="+" ref_description="SGN-E304335 [cLEX-12-O14]">
      <seq>cgaggtacacatacaactctgttctcttcttcactaccattctcacacacactcttctcatcgcttcactctctctctctcttttaacaagaaaatgacagtagcaaacgctgccaccaagcactgcaagaaggccatgaagatgggtctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggcaaaaatgacggtggcgagaataaaattgctgagaaacaagagggaggtggttgtgcggcaaatgaggagagacattgctatgcttcttgaatcccatcaggatgccactgctcgtattagggtcgaacatgtaataagagaacaaaatatattacaagcaaatgagatcctcgagctcttctgtgaacttattgtggctaggttaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgattttcgctgccccaaggtgctcagatattccagaattgatgggaatcaaagatgtttttgagaagaaatatggaaaagattttgtttcagcagcgactgacctgcgacccaatgctggtgtaaaccggacgctcattgaaaagctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139841" stop="137294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139546" g_stop="139359" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="319" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="137983" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="423" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137894" g_stop="137723" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="595" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="137722" i_stop="137612" i_length="111">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.535" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137611" g_stop="137594" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="613" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E304335" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E304335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139546" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="137983"/>
          <exon e_start="137894" e_stop="137723"/>
          <exon e_start="137611" e_stop="137594"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACCGTTACACATACAACTCTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACGGTAATCATATTTCTTCTCTTGAAACTTGTGGTTCTCTTTATCATAATAAATATATCTATATTTATGTGCTTGGGAGAGGGGTCTAAGAGAAGTGGGTAATTGTTGCTACAGCTCATTGAAAAGCTCTCT</genome_strand>
        <mrna_strand>CGA--GGTACACATACAACTCTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACG...............................................................................................................CTCATTGAAAAGCTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482026" ref_strand="+" ref_description="SGN-E482026 [cSTD-20-F23]">
      <seq>tctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggcaaagatgacggtggcgagactaaaattgctgagaaacaagagggaggtggttgtgaggcaaatgaggagagacattgctatgcttcttgaatcccgtcaggatgccactgctcgtattcgggtcgaacatgtaataagggaacaaaatatattgcaagcaaatgagatcctcgagctcttctgtgaactaattgtggctagactaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgatttttgctgccccaaggtgctcagatattccagaattgatgggaattaaagacgtttttgagaagaaatatggaaaagattttgtttcagcagcgactgacctgcgacccaacgctggtgtaaaccggacgctcattgaaaagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139697" stop="137418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139397" g_stop="139359" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="172" r_length="133" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="137983" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="276" r_length="104" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137894" g_stop="137723" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="448" r_length="172" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="137722" i_stop="137612" i_length="111">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.535" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="137611" g_stop="137597" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="463" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E482026" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139397" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="137983"/>
          <exon e_start="137894" e_stop="137723"/>
          <exon e_start="137611" e_stop="137597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACGGTAATCATATTTCTTCTCTTGAAACTTGTGGTTCTCTTTATCATAATAAATATATCTATATTTATGTGCTTGGGAGAGGGGTCTAAGAGAAGTGGGTAATTGTTGCTACAGCTCATTGAAAAGCTC</genome_strand>
        <mrna_strand>TCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCAAAGATGACGGTGGCGAGACTAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGAGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTCGTATTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGGGAACAAAATATATTGCAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTAATTGTGGCTAGACTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTTGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATTAAAGACGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAACGCTGGTGTAAACCGGACG...............................................................................................................CTCATTGAAAAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E581654" ref_strand="+" ref_description="SGN-E581654 [7281]">
      <seq>cttcactctctctttctcttttaagaagaaaatgacagtagcaaacgctgccaccgaagcactgcaagaaggccatgaagatgggtctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggcaaagatgacggtggcgagaataaaattgctgagtaaacaagagggaggtggttgtgaggcaaatgaggagagacattgctatgcttcttgaatcccgtcaggatgccactgcttgtattcgggtcgaacatgtaataagggaacaaaatatattgcaagcaaatgagatcctcgagctcttctgtgaactaattgtggctagactaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgattttttgctggcccaaggtgctcagatattccagaattgattgggaattaaagacgtttttgagaagaaatatggaaaagattttgtttcagcagcgatggactgtgagccaacgctggtgtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139781" stop="137431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139481" g_stop="139359" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="258" r_length="134" r_score="0.947"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="137983" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="362" r_length="104" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137894" g_stop="137731" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="527" r_length="165" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E581654" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139481" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="137983"/>
          <exon e_start="137894" e_stop="137731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACC-AAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAG-AAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGA-TTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGA-TGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAA</genome_strand>
        <mrna_strand>CTTCACTCTCTCTTTCTCTTTTAAGAAGAAAATGACAGTAGCAAACGCTGCCACCGAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCAAAGATGACGGTGGCGAGAATAAAATTGCTGAGTAAACAAGAGGGAGGTGGTTGTGAGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTTGTATTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGGGAACAAAATATATTGCAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTAATTGTGGCTAGACTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTTTGCTGGCCCAAGGTGCTCAGATATTCCAGAATTGATTGGGAATTAAAGACGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGA-TGGACTGTGAGCCAACGCTGGTGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E590705" ref_strand="+" ref_description="SGN-E590705 [44307]">
      <seq>tgtgagatctcgagctcttctgtgaactaattgtggctagactaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgatttttgctgccccaaggtgctcagatattccagaattgatgggaattaaagacgtttttgagaagaaatatggaaaagattttgtttcagcagcgactgacctgcgacccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="138345" stop="137442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138047" g_stop="137983" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137894" g_stop="137742" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="217" r_length="153" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E590705" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>218</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E590705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138047" e_stop="137983"/>
          <exon e_start="137894" e_stop="137742"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAA</genome_strand>
        <mrna_strand>TGTGAGAT-CTCGAGCTCTTCTGTGAACTAATTGTGGCTAGACTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTTGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATTAAAGACGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482346" ref_strand="+" ref_description="SGN-E482346 [cSTD-21-L24]">
      <seq>ctctctttctcttttaagaagaaatgacagtagcaaacgctgccaccaagcactgcaagaaggccatgaagatgggtctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggcaaagatgacggtggcgagaataaaattgctgagaaacaagagggaggtggttgtgaggcaaatgaggagagacattgctatgcttcttgaatcccgtcaggatgccactgctcgtattcgggtcgaacatgtaataagggaacaaaatatattgcaagcaaatgagatcctcgagctcttctgtgaactaattgtggctagactaacaattattgcaaagcaaaagcaatgtccagctgatttgaaagaggggatatcaagtttgatttttgctgccccaaggtgctcagatattccagaattgatgggaattaaagatgtttttgagaagaaatatggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139774" stop="137478"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139474" g_stop="139359" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="248" r_length="133" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="137983" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="352" r_length="104" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88">
            <donor d_prob="0.646" d_score="0.94"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137894" g_stop="137778" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="469" r_length="117" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E482346" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139474" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="137983"/>
          <exon e_start="137894" e_stop="137778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAAGTAAGATGTCTCAAGCTATTAATTTTTTTTAAGGTTAGAAGACAAAGCTCACAAATAACCTTGATTTCTATTTATCTGCCTGTTGCAGGCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAA</genome_strand>
        <mrna_strand>CTCTCTTTCTCTTTTAAGAAG-AAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCAAAGATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGAGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTCGTATTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGGGAACAAAATATATTGCAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTAATTGTGGCTAGACTAACAATTATTGCAAAGCAAAA........................................................................................GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTTGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATTAAAGATGTTTTTGAGAAGAAATATGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E581745" ref_strand="+" ref_description="SGN-E581745 [7374]">
      <seq>cggttgttctcttcttcactaccattctcacacacactcttctcattgcttcactctctctttctcttttaagaagaaaatgacagtagcaaacgctgccaccaagcactgcaagaaggccatgaagatgggtctttctctcttctgcagaaccttcaattcttctaaatgcaagacaatggccaagatgacggtggcgagaataaaattgctgagaaacaagagggaggtggttgtgaggcaaatgaggagagacattgctatgcttcttgaatcccgtcaggatgccactgctcgtattcgggtcgaacatgtaataagggaacaaaatatattgcaagcaaatgagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="139825" stop="137739"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139529" g_stop="139359" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139280" g_stop="139148" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="304" r_length="133" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138086" g_stop="138039" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="352" r_length="48" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E581745" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139529" e_stop="139359"/>
          <exon e_start="139280" e_stop="139148"/>
          <exon e_start="138086" e_stop="138039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATGGTGAATTTCAATATTATTTCTTTTTTGAATAAAATCAATCCTTTTTTTTTTTACATTTTTTTTTGTGTGTGTATGCAGCAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGGGTACTTTTTTTCCATTTTCGTATTTAACCTCTGATTTAGGGTTGGGGCTTGTTTGTTTGATTGATTGATGGATGGATTAATGGAATAATTTTTATGTAATCTCGAAATCAAATCGTAGGAATGGGGAATTTGGTATATCATGCTTGGGGTGTCAGTCCGAGTCATGGTGGCTAGCTCTCTCCTGTTGCTGTTTAGAATTAGTATTGAAACCCTTGTGAATCATTTAGCTTGAAACATACAATTTTTGCTTTGCTTCAAGATTATAGGGTTTCTACATGGGGATAGAGCTGACTTCTTTTTAGGATCTTTTGGGGCTATTCACCAAAACCTGGAGGCTGTGATTAACTTAATCTCGTTGAAGTATCTTGATTGTAGTTATGATTTTTCTCATTCTGAAACACTTTGCTTACTTTAAAATTATGTGCTTTTGCTAAAACCCTCTTTGCTTCTTAATTTATACCATGGGATTTAGTTACTGAATTTCCCTCCTCCTCTAAGCTTTAACAGCTATGCTGGATGTCTACCTTAATTTTGAGCCAAGATACCTCTGCCATACCTCTTTCTGGTTGTGCCTAAAGATTAGACTAATCAATGTGATATGAAATAACTCTTCTATTTAATGCAAAGTCGAGGGTATATTGGAAACAACTACTTTACTCAACAAATGTATGGGTACGATCTCATACATCCTACCCTCCCCCAGACCTCACAGACCTCACTTGTAGGATTACACTGGGCATGACATTGTGGGTGATCTTGAAGTTGCTTAAAAAGACCCATAATATTATGCACTATGAGGGGGCAGAAATACATTGTGTGTTTATCTTTTGGGCAAGAGATTTTGTTGAAAGTTATCTTTCACGTCTATAATGGTGGATATCAATAAACCTCTTCTATTTTGATACACCAACATGTGATTTTAGAATGACATATTTTTCAAGTTAAAGTGGAATCTTCTTACTTCTATTGCTCATGATCCTTCTTAAGAAGTTACTTTTCTTAGGGTTGTCTCTTTCTACTAATCGTTTGGAAAGAACACTCACATGCTTCATTTTTTATAGGTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATC</genome_strand>
        <mrna_strand>CGGTTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATTGCTTCACTCTCTCTTTCTCTTTTAAGAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG..............................................................................CAAGACAATGGCCAAGATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGAGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCGTCAGGATGCCACTGCTCGTATTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAACATGTAATAAGGGAACAAAATATATTGCAAGCAAATGAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745278" ref_strand="+" ref_description="SGN-E745278 [GI|47105800]">
      <seq>gatgaacataacctgttttgtaaaaggaaaaaaaaaatgaacctttcaacaattcgaacaatggctgctccttccccaaggtctcattctcataactcttaccgtacccgttgtgttagttttcctgctagatcacaccccagcacaatcaagattgagcaagttttgaacaaaatcaaaacttgggaatcatcttctcctttatctccaaaagcagaagaaaaaacccaaaatgccctgtcaagcggccttgtagaattgtacgagtgtatagaggaactccttgcgttgccaatgactcagagggcgcttctccagcatcaagatgacaattttgtgaaggaattgctggaaagatcagtgagattcatagatatctgtagcaatacaagggataccgttatgtgtttgaaagaaagcgtgagagaactacaatccgcgcttcgaagaagcaaagctggagatgatttattgactattgagggtagtgttagtgcttatatttcttcaagaaaaaacgctcaaaaggaaattgaaaaatcccttactatactgaaacagatacataacaccccatcagccacaatgaaagactctcagctctctgctataataagagttcttgaagatgccagtttcacaactatttctactttccagtcattgctgatgtttctttatgtgccagcctcgaaaccaaagtccaataaatggtcattggtttcgaagctagtacataaaggggttgtaggcagtgaagggcaaagggaaaagctaactgagttggagaaagttgacactgcactcaacagcttgctggatcatgtttctggacatgaagaggaagtggaaagttttgaatttgcgcaaaagaatctggagaatttggagagtagcattgaggatcttgaaaatggattggaaatgttgttcaagcttttgatccggacaagggtgtctctactcaacatactttctctcagtagataaattgaggtatcatgcataacagctcaattatttttttgcatgattgaagctgtgatgtatagatattgaatttctagtcattgagtactgtagatgaacatattgtgtatagtattagcagctaagggtgaagaggattaagaaacatggacaaagttttccaatttcctaatctttttctctgtttgtcttttgtgttattccagttttacagattagtgccaaaattttgcagaggtgctaattctggccaagattagttattatttggacttgaggcccaaagaagtccaagagtgtgtgcaagtaacatgtagctgtcaatgggctgatatgatatgagtaggcccattcagtatttcagtccattaagggattttagccctttcttgtgtatgttcattctgtactatataatccattaattaatggatctaattgctcattgtgtatgaaatttgtgaatttttttttgaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="143647" stop="1569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143348" g_stop="141882" g_length="1467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1466" r_length="1466" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="141881" i_stop="141092" i_length="790">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141091" g_stop="141073" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1467" r_stop="1485" r_length="19" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E745278" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1486</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143348" e_stop="141882"/>
          <exon e_start="141091" e_stop="141073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGAACATAACCTGTTTTGTAAAAGGAAAAAAAAAATGAACCTTTCAACAATTCGAACAATGGCTGCTCTTTCCCCAAGGTCTCATTCTCATAACTCTTACCGTACCCGTTGTGTTAGTTTTCCTGCTAGATCACACCCCAGCACAATCAAGATTGAGCAAGTTTTGAACAAAATCAAAACTTGGGAATCATCTTCTCCTTTATCTCCAAAAGCAGAAGAAAAAACCCAAAATGCCCTGTCAAGCGGCCTTGTAGAATTGTACGAGTGTATAGAGGAACTCCTTGCGTTGCCAATGACTCAGAGGGCGCTTCTCCAGCATCAAGATGACAATTTTGTGAAGGAATTGCTGGAAAGATCAGTGAGATTCATAGATATCTGTAGCAATACAAGGGATACCGTTATGTGTTTGAAAGAAAGCGTGAGAGAACTACAATCCGCGCTTCGAAGAAGCAAAGCTGGAGATGATTTATTGACTATTGAGGGTAGTGTTAGTGCTTATATTTCTTCAAGAAAAAACGCTCAAAAGGAAATTGAAAAATCCCTTACTATACTGAAACAGATACATAACACCCCATCAGCCACAATGAAAGACTCTCAGCTCTCTGCTATAATAAGAGTTCTTGAAGATGCCAGTTTCACAACTATTTCTACTTTCCAGTCATTGCTGATGTTTCTTTATGTGCCAGCCTCGAAACCAAAGTCCAATAAATGGTCATTGGTTTCGAAGCTAGTACATAAAGGGGTTGTAGGCAGTGAAGGGCAAAGGGAAAAGCTAACTGAGTTGGAGAAAGTTGACACTGCACTCAACAGCTTGCTGGATCATGTTTCTGGACATGAAGAGGAAGTGGAAAGTTTTGAATTTGCACAAAAGAATCTGGAGAATTTGGAGAGTAGCATTGAGGATCTTGAAAATGGATTGGAAATGTTGTTCAAGCTTTTGATCCGGACAAGGGTGTCTCTACTCAACATACTTTCTCTCAGTAGATAAATTGAGGTATCATGCATAACAGCTCAAGTATTTTTTTGCATGATTGAAGCTGTGATGTATAGATATTGAATTTCTAGTCATTGAGTACTGTAGATGAACATATTGTGTATAGTATTAGCAGCTAAGGGTGAAGAGGATTAAGAAACATGGACAAAGTTTTCCAATTTCCTAATCTTTTTCTCTGTTTGTCTTTTGTGTTATTCCAGTTTTACAGATTAGTGCCAAAATTTTGCAGAGGTGCTAATTCTGGCCAAGATTAGTTATTATTTGGACTTGAGGCCCAAAGAAGTCCAAGAGTGTGTGCAAGTAACATGTAGCTGTCAATGGGCTGATATGATATGAGTAGGCCCATTCAGTATTTCAGTCCATTAAGGGATTTTAGCCCTTTCTTGTGTATGTTCATTCTGTACTATATAATCCATTAATTAATGGATCTAATTGCTCATTGTGTATGAAATTTGTGAATTTTTTTTTTGGATGCTTCTTAAATTGATCTGTTGCAGGTGTAGTAACTAAATGGGTGAAAATCCCTTCCTTTTTATTTAGTTATAATAATGTGTTCAAATTAATATTATAACAATGATGCTAAGATATCTGTAGAACAAGAATGATAGTGAATCTTTTTAACAACTCGAATGGGATGTTTATTAACAAAGACTTAAGTCATAGACAACCCTTTAAAGTTTTTCACACATTTCATTTAAATATCTCAATTTAGCTTTGTACTTATCCAGCACTTAAATCTTAACAAATTTGTACCTATTTATCGCAAAATTACAATAAATTGATAATAAATATGAGTGTGTTTCGAACTCCTCGACATAACAAACATACCAATAAAAGAATGACATATGTCATGGATCTAAATTTTTTAAAAACTCTATTTAAATAATTTAAAATGAATATTAAAAAAATAAAATTTTATCATTTTGAATTACCCTCTCCACCTGTCTTCTCTTCTTCTTCAGAACCTATTTCCATGGCCTTCCAATTTCCATTGACGCTGACGCTGACGCCGATGCCAGCAGCCTAGAAAATCATCATCCGACCTCTATCTTCCCCCTCCCCCCCTTGAATCGACCATTCTCTTCCATTTTGATATCATCAAAATCATTCATTATCTTTATCATTTTTCGATTAAAAATTATTAATTACAATTACAATTACAAGAGATAATAATAAACTTTTGCCCGAAAAAGTCAATTCATATTTTTTCATCGGATTGAATGGAGCTTCACCAAAATTTTGACAGAGTGAATCTACATTTAAAAAAAAAAGAAAAAGAA</genome_strand>
        <mrna_strand>GATGAACATAACCTGTTTTGTAAAAGGAAAAAAAAAATGAACCTTTCAACAATTCGAACAATGGCTGCTCCTTCCCCAAGGTCTCATTCTCATAACTCTTACCGTACCCGTTGTGTTAGTTTTCCTGCTAGATCACACCCCAGCACAATCAAGATTGAGCAAGTTTTGAACAAAATCAAAACTTGGGAATCATCTTCTCCTTTATCTCCAAAAGCAGAAGAAAAAACCCAAAATGCCCTGTCAAGCGGCCTTGTAGAATTGTACGAGTGTATAGAGGAACTCCTTGCGTTGCCAATGACTCAGAGGGCGCTTCTCCAGCATCAAGATGACAATTTTGTGAAGGAATTGCTGGAAAGATCAGTGAGATTCATAGATATCTGTAGCAATACAAGGGATACCGTTATGTGTTTGAAAGAAAGCGTGAGAGAACTACAATCCGCGCTTCGAAGAAGCAAAGCTGGAGATGATTTATTGACTATTGAGGGTAGTGTTAGTGCTTATATTTCTTCAAGAAAAAACGCTCAAAAGGAAATTGAAAAATCCCTTACTATACTGAAACAGATACATAACACCCCATCAGCCACAATGAAAGACTCTCAGCTCTCTGCTATAATAAGAGTTCTTGAAGATGCCAGTTTCACAACTATTTCTACTTTCCAGTCATTGCTGATGTTTCTTTATGTGCCAGCCTCGAAACCAAAGTCCAATAAATGGTCATTGGTTTCGAAGCTAGTACATAAAGGGGTTGTAGGCAGTGAAGGGCAAAGGGAAAAGCTAACTGAGTTGGAGAAAGTTGACACTGCACTCAACAGCTTGCTGGATCATGTTTCTGGACATGAAGAGGAAGTGGAAAGTTTTGAATTTGCGCAAAAGAATCTGGAGAATTTGGAGAGTAGCATTGAGGATCTTGAAAATGGATTGGAAATGTTGTTCAAGCTTTTGATCCGGACAAGGGTGTCTCTACTCAACATACTTTCTCTCAGTAGATAAATTGAGGTATCATGCATAACAGCTCAATTATTTTTTTGCATGATTGAAGCTGTGATGTATAGATATTGAATTTCTAGTCATTGAGTACTGTAGATGAACATATTGTGTATAGTATTAGCAGCTAAGGGTGAAGAGGATTAAGAAACATGGACAAAGTTTTCCAATTTCCTAATCTTTTTCTCTGTTTGTCTTTTGTGTTATTCCAGTTTTACAGATTAGTGCCAAAATTTTGCAGAGGTGCTAATTCTGGCCAAGATTAGTTATTATTTGGACTTGAGGCCCAAAGAAGTCCAAGAGTGTGTGCAAGTAACATGTAGCTGTCAATGGGCTGATATGATATGAGTAGGCCCATTCAGTATTTCAGTCCATTAAGGGATTTTAGCCCTTTCTTGTGTATGTTCATTCTGTACTATATAATCCATTAATTAATGGATCTAATTGCTCATTGTGTATGAAATTTGTGAA-TTTTTTTTTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E322073" ref_strand="+" ref_description="SGN-E322073 [cTOB-29-O12]">
      <seq>gaactccttgcgttgccaatgactcagagggcgcttctccagcatcaagatgacaattttgtgaaggaattgctggaaagatcagtgagattcatagatatctgtagcaatacaagggataccgttatgtgtttgaaagaaagcgtgagagaactacaatccgcgcttcgaagaagcaaagctggagatgatttattgactattgagggtagtgttagtgcttatatttcttcaagaaaaaacgctcaaaaggaaattgaaaaatcccttactatactgaaacagatacataacaccccatcagccacaatgaaagactctcagctctctgctataataagagttcttgaagatgccagtttcacaactatttctactttccagtcattgctgatgtttctttatgtgccagcctcgaaaccaaagtccaataaatggtcattggtttcgaagctagtacataaaggggttgtaggcagtgaagggcaaagggaaaagctaactgagttggagaaagttgacactgcactcaacagcttgctggatcatgtttctggacatgaagaggaagtggaaagttttgaatttgcacaaaagaatctggagaatttggagagtagcattgaggatcttgaaaatggattggaaatgttgttncagcttttgatccggacaagggtgtctctactcaacatactttctctcagtagataaattgaggtatcatgcataacagctcaagtatttttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="143372" stop="142021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143072" g_stop="142321" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="752" r_length="752" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E322073" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322073" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143072" e_stop="142321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTCCTTGCGTTGCCAATGACTCAGAGGGCGCTTCTCCAGCATCAAGATGACAATTTTGTGAAGGAATTGCTGGAAAGATCAGTGAGATTCATAGATATCTGTAGCAATACAAGGGATACCGTTATGTGTTTGAAAGAAAGCGTGAGAGAACTACAATCCGCGCTTCGAAGAAGCAAAGCTGGAGATGATTTATTGACTATTGAGGGTAGTGTTAGTGCTTATATTTCTTCAAGAAAAAACGCTCAAAAGGAAATTGAAAAATCCCTTACTATACTGAAACAGATACATAACACCCCATCAGCCACAATGAAAGACTCTCAGCTCTCTGCTATAATAAGAGTTCTTGAAGATGCCAGTTTCACAACTATTTCTACTTTCCAGTCATTGCTGATGTTTCTTTATGTGCCAGCCTCGAAACCAAAGTCCAATAAATGGTCATTGGTTTCGAAGCTAGTACATAAAGGGGTTGTAGGCAGTGAAGGGCAAAGGGAAAAGCTAACTGAGTTGGAGAAAGTTGACACTGCACTCAACAGCTTGCTGGATCATGTTTCTGGACATGAAGAGGAAGTGGAAAGTTTTGAATTTGCACAAAAGAATCTGGAGAATTTGGAGAGTAGCATTGAGGATCTTGAAAATGGATTGGAAATGTTGTTCAAGCTTTTGATCCGGACAAGGGTGTCTCTACTCAACATACTTTCTCTCAGTAGATAAATTGAGGTATCATGCATAACAGCTCAAGTATTTTTTTG</genome_strand>
        <mrna_strand>GAACTCCTTGCGTTGCCAATGACTCAGAGGGCGCTTCTCCAGCATCAAGATGACAATTTTGTGAAGGAATTGCTGGAAAGATCAGTGAGATTCATAGATATCTGTAGCAATACAAGGGATACCGTTATGTGTTTGAAAGAAAGCGTGAGAGAACTACAATCCGCGCTTCGAAGAAGCAAAGCTGGAGATGATTTATTGACTATTGAGGGTAGTGTTAGTGCTTATATTTCTTCAAGAAAAAACGCTCAAAAGGAAATTGAAAAATCCCTTACTATACTGAAACAGATACATAACACCCCATCAGCCACAATGAAAGACTCTCAGCTCTCTGCTATAATAAGAGTTCTTGAAGATGCCAGTTTCACAACTATTTCTACTTTCCAGTCATTGCTGATGTTTCTTTATGTGCCAGCCTCGAAACCAAAGTCCAATAAATGGTCATTGGTTTCGAAGCTAGTACATAAAGGGGTTGTAGGCAGTGAAGGGCAAAGGGAAAAGCTAACTGAGTTGGAGAAAGTTGACACTGCACTCAACAGCTTGCTGGATCATGTTTCTGGACATGAAGAGGAAGTGGAAAGTTTTGAATTTGCACAAAAGAATCTGGAGAATTTGGAGAGTAGCATTGAGGATCTTGAAAATGGATTGGAAATGTTGTTNCAGCTTTTGATCCGGACAAGGGTGTCTCTACTCAACATACTTTCTCTCAGTAGATAAATTGAGGTATCATGCATAACAGCTCAAGTATTTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707944" ref_strand="+" ref_description="SGN-E707944 [FA34BF05]">
      <seq>caattaaaaatgaacctttcaacaattcgaacaatggctgctctttccccaaggtctcattctcataactcttaccgtacccgttgtgttagttttcctgctagatcacaccccagcacaatcaagattgagcaagttttgaacaaaatcaaaacttgggaatcatcttctcctttatctccaaaagcagaagaaaaaacccaaaatgccctgtcaagcggccttgtagaattgtacgagtgtatagaggaactccttgcgttgccaatgactcaaagggcgcttctccagcatcaagatgacaattttgtgaaggaattgctggaaagatcagtgagattcatagatatctgtagcaatacaagggataccgttatgtgtttgaaagaaagcgtgagagaactacaatccgcgcttcgaagaagcaaagctggagatgatttattgactattgagggtagtgttagtgcttatatttcttcaagaaaaaacgctcaaaaggaaattgaaaaatcccttactatactgaaacagatacataacaccccatcagccacaatgaaagactctcagctctctgctataataagagttcttgaagatgccagtttcacaactatttctactttccagtcattgctgatgtttctttatgtgccagcctcgaaaccaaagtccaataaatggtcattggtttcgaagctagtacataaaggggttgtaggcagtgaagggcaaagggaaaagctaactgagttggagaaagttgacactgcactcaacagcttgctggatcatgtttctggacatgaagaggaagtggaaagttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="-" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="143620" stop="142190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143321" g_stop="142490" g_length="832"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="832" r_length="832" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="-" ref_id="SGN-E707944" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143321" e_stop="142490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAAATGAACCTTTCAACAATTCGAACAATGGCTGCTCTTTCCCCAAGGTCTCATTCTCATAACTCTTACCGTACCCGTTGTGTTAGTTTTCCTGCTAGATCACACCCCAGCACAATCAAGATTGAGCAAGTTTTGAACAAAATCAAAACTTGGGAATCATCTTCTCCTTTATCTCCAAAAGCAGAAGAAAAAACCCAAAATGCCCTGTCAAGCGGCCTTGTAGAATTGTACGAGTGTATAGAGGAACTCCTTGCGTTGCCAATGACTCAGAGGGCGCTTCTCCAGCATCAAGATGACAATTTTGTGAAGGAATTGCTGGAAAGATCAGTGAGATTCATAGATATCTGTAGCAATACAAGGGATACCGTTATGTGTTTGAAAGAAAGCGTGAGAGAACTACAATCCGCGCTTCGAAGAAGCAAAGCTGGAGATGATTTATTGACTATTGAGGGTAGTGTTAGTGCTTATATTTCTTCAAGAAAAAACGCTCAAAAGGAAATTGAAAAATCCCTTACTATACTGAAACAGATACATAACACCCCATCAGCCACAATGAAAGACTCTCAGCTCTCTGCTATAATAAGAGTTCTTGAAGATGCCAGTTTCACAACTATTTCTACTTTCCAGTCATTGCTGATGTTTCTTTATGTGCCAGCCTCGAAACCAAAGTCCAATAAATGGTCATTGGTTTCGAAGCTAGTACATAAAGGGGTTGTAGGCAGTGAAGGGCAAAGGGAAAAGCTAACTGAGTTGGAGAAAGTTGACACTGCACTCAACAGCTTGCTGGATCATGTTTCTGGACATGAAGAGGAAGTGGAAAGTTTTG</genome_strand>
        <mrna_strand>CAATTAAAAATGAACCTTTCAACAATTCGAACAATGGCTGCTCTTTCCCCAAGGTCTCATTCTCATAACTCTTACCGTACCCGTTGTGTTAGTTTTCCTGCTAGATCACACCCCAGCACAATCAAGATTGAGCAAGTTTTGAACAAAATCAAAACTTGGGAATCATCTTCTCCTTTATCTCCAAAAGCAGAAGAAAAAACCCAAAATGCCCTGTCAAGCGGCCTTGTAGAATTGTACGAGTGTATAGAGGAACTCCTTGCGTTGCCAATGACTCAAAGGGCGCTTCTCCAGCATCAAGATGACAATTTTGTGAAGGAATTGCTGGAAAGATCAGTGAGATTCATAGATATCTGTAGCAATACAAGGGATACCGTTATGTGTTTGAAAGAAAGCGTGAGAGAACTACAATCCGCGCTTCGAAGAAGCAAAGCTGGAGATGATTTATTGACTATTGAGGGTAGTGTTAGTGCTTATATTTCTTCAAGAAAAAACGCTCAAAAGGAAATTGAAAAATCCCTTACTATACTGAAACAGATACATAACACCCCATCAGCCACAATGAAAGACTCTCAGCTCTCTGCTATAATAAGAGTTCTTGAAGATGCCAGTTTCACAACTATTTCTACTTTCCAGTCATTGCTGATGTTTCTTTATGTGCCAGCCTCGAAACCAAAGTCCAATAAATGGTCATTGGTTTCGAAGCTAGTACATAAAGGGGTTGTAGGCAGTGAAGGGCAAAGGGAAAAGCTAACTGAGTTGGAGAAAGTTGACACTGCACTCAACAGCTTGCTGGATCATGTTTCTGGACATGAAGAGGAAGTGGAAAGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E215029" ref_strand="+" ref_description="SGN-E215029 [cLEC-78-M5]">
      <seq>tcccaaaattgctgctactgtgttagacaatggccaacaaggtttccaatttctcggatctgatccaacgtgtcactgcttcttgcttgctccacccactttcctccaacggccacatctctggtgctcgtgacgccgacgaatctgaagatgacaagtacactaccgaagaagaagaagaagaacactcaccttatgtggaaactctggaaaaattccagaatttcgaggtaaaaaatgaggagataagaactgagaaagtaaatgaaatggaaatgcttttaggggaagtgtttgatgcagtgtcggcaatgaagaaggcttacgttagtctacaggaggcgcattgtccttgggatcaggataaaatgcgcgtggctgacgtggctgtgatatctgaactgcgaaggcttggagtgttgagggaaagattccggcggaatgtcggcggtggaagtgaaagaggggactggagagtcggggtggcgacgctgagagaagtggtggcgccgtatgagtcagccgtggaagaactgaagcaagaggtgaaggcaaaggatattgagatcgatgatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="148730" stop="149907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="149030" g_stop="149607" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E215029" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E215029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="149030" e_stop="149607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAAAATTGCTGCTACTGTGTTAGACAATGGCCAACAAGGTTTCCAATTTCTCGGATCTGATCCAACGTGTCACTGCTTCTTGCTTGCTCCACCCACTTTCCTCCAACGGCCACATCTCTGGTGCTCGTGACGCCGACGAATCTGAAGATGACAAGTACACTACCGAAGAAGAAGAAGAAGAACACTCACCTTATGTGGAAACTCTGGAAAAATTCCAGAATTTCGAGGTAAAAAATGAGGAGATAAGAACTGAGAAAGTAAATGAAATGGAAATGCTTTTAGGGGAAGTGTTTGATGCAGTGTCGGCAATGAAGAAGGCTTACGTTAGTCTACAGGAGGCGCATTGTCCTTGGGATCAGGATAAAATGCGCGTGGCTGACGTGGCTGTGATATCTGAACTGCGAAGGCTTGGAGTGTTGAGGGAAAGATTCCGGCGGAATGTCGGCGGTGGAAGTGAAAGAGGGGACTGGAGAGTCGGGGTGGCGACGCTGAGAGAAGTGGTGGCGCCGTATGAGTCAGCCGTGGAAGAACTGAAGCAAGAGGTGAAGGCAAAGGATATTGAGATCGATGATTTG</genome_strand>
        <mrna_strand>TCCCAAAATTGCTGCTACTGTGTTAGACAATGGCCAACAAGGTTTCCAATTTCTCGGATCTGATCCAACGTGTCACTGCTTCTTGCTTGCTCCACCCACTTTCCTCCAACGGCCACATCTCTGGTGCTCGTGACGCCGACGAATCTGAAGATGACAAGTACACTACCGAAGAAGAAGAAGAAGAACACTCACCTTATGTGGAAACTCTGGAAAAATTCCAGAATTTCGAGGTAAAAAATGAGGAGATAAGAACTGAGAAAGTAAATGAAATGGAAATGCTTTTAGGGGAAGTGTTTGATGCAGTGTCGGCAATGAAGAAGGCTTACGTTAGTCTACAGGAGGCGCATTGTCCTTGGGATCAGGATAAAATGCGCGTGGCTGACGTGGCTGTGATATCTGAACTGCGAAGGCTTGGAGTGTTGAGGGAAAGATTCCGGCGGAATGTCGGCGGTGGAAGTGAAAGAGGGGACTGGAGAGTCGGGGTGGCGACGCTGAGAGAAGTGGTGGCGCCGTATGAGTCAGCCGTGGAAGAACTGAAGCAAGAGGTGAAGGCAAAGGATATTGAGATCGATGATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E710268" ref_strand="+" ref_description="SGN-E710268 [FA54DF07]">
      <seq>tggccaacaaggtttccaatttctcggatctgatccaacgtgtcactgcttcttgcttgctccacccactttcctccaacggccacatctctggtgctcgtgacgccgacgaatctgaagatgacaagtacactaccgaagaagaagaagaagaacactcaccttatgtggaaactctggaaaaattccagaatttcgaggtaaaaaatgaggagataagaactgagaaagtaaatgaaatggaaatgcttttaggggaagtgtttgatgcagtgtcggcaatgaagaaggcttacgttagtctacaggaggcgcattgtccttgggatcaggataaaatgcgcgtggctgacgtggctgtgatatctgaactgcgaaggcttggagtgttgagggaaagattccggcggaatgtcggcggtggaagtgaaagaggggactggagagtcggggtggcgacgctgagagaagtggtggcgccgtatgagtcagccgtggaagaactgaagcaagaggtgaaggccaaggatattgagatcgatgatttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="148760" stop="149908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="149060" g_stop="149608" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E710268" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710268" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="149060" e_stop="149608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCCAACAAGGTTTCCAATTTCTCGGATCTGATCCAACGTGTCACTGCTTCTTGCTTGCTCCACCCACTTTCCTCCAACGGCCACATCTCTGGTGCTCGTGACGCCGACGAATCTGAAGATGACAAGTACACTACCGAAGAAGAAGAAGAAGAACACTCACCTTATGTGGAAACTCTGGAAAAATTCCAGAATTTCGAGGTAAAAAATGAGGAGATAAGAACTGAGAAAGTAAATGAAATGGAAATGCTTTTAGGGGAAGTGTTTGATGCAGTGTCGGCAATGAAGAAGGCTTACGTTAGTCTACAGGAGGCGCATTGTCCTTGGGATCAGGATAAAATGCGCGTGGCTGACGTGGCTGTGATATCTGAACTGCGAAGGCTTGGAGTGTTGAGGGAAAGATTCCGGCGGAATGTCGGCGGTGGAAGTGAAAGAGGGGACTGGAGAGTCGGGGTGGCGACGCTGAGAGAAGTGGTGGCGCCGTATGAGTCAGCCGTGGAAGAACTGAAGCAAGAGGTGAAGGCAAAGGATATTGAGATCGATGATTTGA</genome_strand>
        <mrna_strand>TGGCCAACAAGGTTTCCAATTTCTCGGATCTGATCCAACGTGTCACTGCTTCTTGCTTGCTCCACCCACTTTCCTCCAACGGCCACATCTCTGGTGCTCGTGACGCCGACGAATCTGAAGATGACAAGTACACTACCGAAGAAGAAGAAGAAGAACACTCACCTTATGTGGAAACTCTGGAAAAATTCCAGAATTTCGAGGTAAAAAATGAGGAGATAAGAACTGAGAAAGTAAATGAAATGGAAATGCTTTTAGGGGAAGTGTTTGATGCAGTGTCGGCAATGAAGAAGGCTTACGTTAGTCTACAGGAGGCGCATTGTCCTTGGGATCAGGATAAAATGCGCGTGGCTGACGTGGCTGTGATATCTGAACTGCGAAGGCTTGGAGTGTTGAGGGAAAGATTCCGGCGGAATGTCGGCGGTGGAAGTGAAAGAGGGGACTGGAGAGTCGGGGTGGCGACGCTGAGAGAAGTGGTGGCGCCGTATGAGTCAGCCGTGGAAGAACTGAAGCAAGAGGTGAAGGCCAAGGATATTGAGATCGATGATTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404564" ref_strand="+" ref_description="SGN-E404564 [PPC-14-O12]">
      <seq>gcaaaatacgcactggaatcttatgtgaaccgcaaaatgttccaaggattcgatcacgagacattctacatggacggaagcttgtcatcactcctccacccagaccagcaccgccgggagtgttatacacagtacagggacatgaaagccatggacccaatggaacttctgggaattctcccaacttgcagttttgggaacttctgtttcaagaagtatttggccattgtacaccccaaaatggaggagtctctgtttggtgatttggagcagaagcgtcaggtactggctgggaaccatccgaggagtcagttttacggggagtttcttggactagcaaagaccgtttggctgctgcatttgctggcgttttctttggatcctccgccaagtcattttgaagcaagcaatggatccgagtttcacccgaagtacatggatagtgtggtgaagtattccatttccatgggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0060J03-rFSNs/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0060J03.2" temp_strand="+" temp_description="C02HBa0060J03.2  AC215372.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0060J03 sequenced_by:kribb upload_account_name:korea">
        <position start="149599" stop="150426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="149899" g_stop="150370" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0060J03.2" gen_strand="+" ref_id="SGN-E404564" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0060J03.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="149899" e_stop="150370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAATACGCACTGGAATCTTATGTGAACCGCAAAATGTTCCAAGGATTCGATCACGAGACGTTCTACATGGACGGAAGCTTGTCATCACTCCTCCACCCAGACCAGCACCGCCGGGAGTGTTATACACAGTACAGGGACATGAAAGCCATGGACCCAATGGAACTTCTGGGAATTCTCCCAACTTGTAGTTTTGGGAACTTCTGTTTCAAGAAGTATTTGGCCATCGTGCATCCTAAAATGGAGGAGTCTTTGTTTGGTGATTTGGAGCAGAGGCGTCAGGTACTGGCTGGGAACCATCCGAGGAGTCAGTTTTACGGAGAGTTTCTTGGGCTAGCAAAGGCCGTTTGGCTGCTGCATTTGCTGGCCTTTTCTTTGGATCCTCCGCCAAGTCACTTTGAGACAAGCAATGGATCGGAGTTTCACCCCAAGTACATGGAAAGTGTGGTGAAGTATTCCATTTCCATGGGGA</genome_strand>
        <mrna_strand>GCAAAATACGCACTGGAATCTTATGTGAACCGCAAAATGTTCCAAGGATTCGATCACGAGACATTCTACATGGACGGAAGCTTGTCATCACTCCTCCACCCAGACCAGCACCGCCGGGAGTGTTATACACAGTACAGGGACATGAAAGCCATGGACCCAATGGAACTTCTGGGAATTCTCCCAACTTGCAGTTTTGGGAACTTCTGTTTCAAGAAGTATTTGGCCATTGTACACCCCAAAATGGAGGAGTCTCTGTTTGGTGATTTGGAGCAGAAGCGTCAGGTACTGGCTGGGAACCATCCGAGGAGTCAGTTTTACGGGGAGTTTCTTGGACTAGCAAAGACCGTTTGGCTGCTGCATTTGCTGGCGTTTTCTTTGGATCCTCCGCCAAGTCATTTTGAAGCAAGCAATGGATCCGAGTTTCACCCGAAGTACATGGATAGTGTGGTGAAGTATTCCATTTCCATGGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>282</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="198" PGL_stop="804"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="198" e_stop="241"/>
            <exon e_start="337" e_stop="804"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.831" acc_prob="0.970" e_score="0.909"/>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="198" e_stop="241" e_length="44"/>
          </exon>
          <intron i_serial="1" don_prob="0.831" acc_prob="0.970">
            <gDNA_intron_boundary i_start="242" i_stop="336" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="0.904">
            <gDNA_exon_boundary e_start="337" e_stop="804" e_length="468"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="198" stop="241"/>
              <exon start="337" stop="804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612272" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCATTATGCATGGACAGAAAAGCAAAGGCGTCCACGGGGACAG : ATCTATGGATACAGAATGTCCCTATGGGCAGAACACCTTGGGAGGATAGAAGAATGTTTCAAGGAACCAGAGGCGCTAACATGCGTGAGGAAGGTGAATGAGGTTGCTGAAGGAAACTGGAAGAGTTACACAGCTGAAAAGTTCACTCAACTACATGGACATCTTCTCAAGTATCCAATACATGTAGGCGCGGACGGGAAAGTAGGTCCATTAGCTGAATATGAAAATTTCCCAGATGTAGGAGGTAGAATTCTGGGAAATCATGCCCCTACTATCCCAGATGTTTTGACTACATAGTCAGTCCTCAATAATTAACACGATTGTGAGTGTTTGGACACTCTGAAAATATGTAGCTGCAAGATCCTTATTAGTCAATTTTGTACATTTGTTCTATGTTGTACAATAGAGGGTGAAAAAAAGGATAGAAATGATATGATTGTGGGCTTGTATTTGTGCTGAATATTGTGG</gDNA_template>
            <first_frame> L  I  M  H  G  Q  K  S  K  G  V  H  G  D  R :   S  M  D  T  E  C  P  Y  G  Q  N  T  L  G  G  *  K  N  V  S  R  N  Q  R  R  *  H  A  *  G  R  *  M  R  L  L  K  E  T  G  R  V  T  Q  L  K  S  S  L  N  Y  M  D  I  F  S  S  I  Q  Y  M  *  A  R  T  G  K  *  V  H  *  L  N  M  K  I  S  Q  M  *  E  V  E  F  W  E  I  M  P  L  L  S  Q  M  F  *  L  H  S  Q  S  S  I  I  N  T  I  V  S  V  W  T  L  *  K  Y  V  A  A  R  S  L  L  V  N  F  V  H  L  F  Y  V  V  Q  *  R  V  K  K  R  I  E  M  I  *  L  W  A  C  I  C  A  E  Y  C   </first_frame>
            <second_frame>  S  L  C  M  D  R  K  A  K  A  S  T  G  T   : D  L  W  I  Q  N  V  P  M  G  R  T  P  W  E  D  R  R  M  F  Q  G  T  R  G  A  N  M  R  E  E  G  E  *  G  C  *  R  K  L  E  E  L  H  S  *  K  V  H  S  T  T  W  T  S  S  Q  V  S  N  T  C  R  R  G  R  E  S  R  S  I  S  *  I  *  K  F  P  R  C  R  R  *  N  S  G  K  S  C  P  Y  Y  P  R  C  F  D  Y  I  V  S  P  Q  *  L  T  R  L  *  V  F  G  H  S  E  N  M  *  L  Q  D  P  Y  *  S  I  L  Y  I  C  S  M  L  Y  N  R  G  *  K  K  G  *  K  *  Y  D  C  G  L  V  F  V  L  N  I  V  </second_frame>
            <third_frame>   H  Y  A  W  T  E  K  Q  R  R  P  R  G  Q  :  I  Y  G  Y  R  M  S  L  W  A  E  H  L  G  R  I  E  E  C  F  K  E  P  E  A  L  T  C  V  R  K  V  N  E  V  A  E  G  N  W  K  S  Y  T  A  E  K  F  T  Q  L  H  G  H  L  L  K  Y  P  I  H  V  G  A  D  G  K  V  G  P  L  A  E  Y  E  N  F  P  D  V  G  G  R  I  L  G  N  H  A  P  T  I  P  D  V  L  T  T  *  S  V  L  N  N  *  H  D  C  E  C  L  D  T  L  K  I  C  S  C  K  I  L  I  S  Q  F  C  T  F  V  L  C  C  T  I  E  G  E  K  K  D  R  N  D  M  I  V  G  L  Y  L  C  *  I  L  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="200" stop="241"/>
                    <exon start="337" stop="633"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HYAWTEKQRRPRGQIYGYRMSLWAEHLGRIEECFKEPEALTCVRKVNEVAEGNWKSYTAEKFTQLHGHLLKYPIHVGADGKVGPLAEYENFPDVGGRILGNHAPTIPDVLTT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="7423" PGL_stop="11800"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7423" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10716"/>
            <exon e_start="11528" e_stop="11550"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.610" e_score="0.998"/>
          <exon-only e_score="0.565"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7423" e_stop="7513" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="0.998">
            <gDNA_exon_boundary e_start="10310" e_stop="10716" e_length="407"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.610">
            <gDNA_intron_boundary i_start="10717" i_stop="11527" i_length="811"/>
          </intron>
          <exon e_serial="8" e_score="0.565">
            <gDNA_exon_boundary e_start="11528" e_stop="11550" e_length="23"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7423" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7439" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10716"/>
              <exon start="11528" stop="11550"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7465" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7466" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7482" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8616" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290120" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTT : GTGAACAGAAGGGTTAGGAAAAA</gDNA_template>
            <first_frame> L  K  L  Q  L  L  H  H  S  S  R  V  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  W  V  P  K  I  S  K  T  F  S  I  *  R  W  A  R  L  F  S  Q  T  L  S  I  *  R  W  A  R  L  F  S  *  T  L  T  L  C  W  K  V  E  T  C  A  I  P  V  I  F  S  L  *  K  E  L  P  S  W  L  *  I  S  G  F  R  P  Q  L  W  K  L  L  L  *  G  S  I  S  L  M  W  T  S  L  D  V  K  E  Y  W  L  M  N  V  C  L  G  Y  T  L  N  V  D  Y  L  *  S  F  *  N  F  M  M  Y  V  F  S  F  V  A   : C  E  Q  K  G  *  E  K </first_frame>
            <second_frame>  *  S  F  N  S  C  I  I  L  V  E  S  I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y  G  Y  R  R  S  P  R  R  S  P  Y  R  G  G  R  D  Y  S  P  R  H  S  P  Y  R  G  G  R  D  Y  S  P  R  R  S  P  Y  A  G  R  S  R  R  A  R  S  R  S  Y  S  P  Y  E  R  N  Y  P  R  G  Y  R  *  V  G  F  V  L  S  Y  G  N  C  F  C  K  D  L  *  V  *  C  G  L  V  L  M  L  K  S  T  G  *  *  M  Y  V  W  V  T  P  *  M  W  I  I  C  N  L  S  E  T  L  *  C  M  Y  S  L  S  L  L  :  V  N  R  R  V  R  K   </second_frame>
            <third_frame>   K  A  S  T  L  A  S  F  *  S  S  Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  S :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T  M  G  T  E  D  L  Q  D  V  L  H  I  E  V  G  E  I  I  L  P  D  T  L  H  I  E  V  G  E  I  I  L  L  D  A  H  L  M  L  E  G  R  D  V  R  D  P  G  H  I  L  L  M  K  G  T  T  L  V  V  I  D  K  W  V  S  S  S  A  M  E  T  A  F  V  R  I  Y  K  F  D  V  D  *  S  *  C  *  R  V  L  V  N  E  C  M  S  G  L  H  L  E  C  G  L  S  V  I  F  L  K  L  Y  D  V  C  I  L  F  R  C  L :   *  T  E  G  L  G  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7466" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="10157" stop="10229"/>
                    <exon start="10310" stop="10539"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLRIGNLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDYGYRRSPRRSPYRGGRDYSPRHSPYRGGRDYSPRRSPYAGRSRRARSRSYSPYERNYPRGYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="7423" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10719"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7423" e_stop="7513" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="0.997">
            <gDNA_exon_boundary e_start="10310" e_stop="10719" e_length="410"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7423" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7465" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7466" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7482" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8616" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10405" stop="10719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229063" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTC</gDNA_template>
            <first_frame> L  K  L  Q  L  L  H  H  S  S  R  V  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  W  V  P  K  I  S  K  T  F  S  I  *  R  W  A  R  L  F  S  Q  T  L  S  I  *  R  W  A  R  L  F  S  *  T  L  T  L  C  W  K  V  E  T  C  A  I  P  V  I  F  S  L  *  K  E  L  P  S  W  L  *  I  S  G  F  R  P  Q  L  W  K  L  L  L  *  G  S  I  S  L  M  W  T  S  L  D  V  K  E  Y  W  L  M  N  V  C  L  G  Y  T  L  N  V  D  Y  L  *  S  F  *  N  F  M  M  Y  V  F  S  F  V  A  C  </first_frame>
            <second_frame>  *  S  F  N  S  C  I  I  L  V  E  S  I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y  G  Y  R  R  S  P  R  R  S  P  Y  R  G  G  R  D  Y  S  P  R  H  S  P  Y  R  G  G  R  D  Y  S  P  R  R  S  P  Y  A  G  R  S  R  R  A  R  S  R  S  Y  S  P  Y  E  R  N  Y  P  R  G  Y  R  *  V  G  F  V  L  S  Y  G  N  C  F  C  K  D  L  *  V  *  C  G  L  V  L  M  L  K  S  T  G  *  *  M  Y  V  W  V  T  P  *  M  W  I  I  C  N  L  S  E  T  L  *  C  M  Y  S  L  S  L  L  V </second_frame>
            <third_frame>   K  A  S  T  L  A  S  F  *  S  S  Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  S :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T  M  G  T  E  D  L  Q  D  V  L  H  I  E  V  G  E  I  I  L  P  D  T  L  H  I  E  V  G  E  I  I  L  L  D  A  H  L  M  L  E  G  R  D  V  R  D  P  G  H  I  L  L  M  K  G  T  T  L  V  V  I  D  K  W  V  S  S  S  A  M  E  T  A  F  V  R  I  Y  K  F  D  V  D  *  S  *  C  *  R  V  L  V  N  E  C  M  S  G  L  H  L  E  C  G  L  S  V  I  F  L  K  L  Y  D  V  C  I  L  F  R  C  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7466" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="10157" stop="10229"/>
                    <exon start="10310" stop="10539"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLRIGNLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDYGYRRSPRRSPYRGGRDYSPRHSPYRGGRDYSPRRSPYAGRSRRARSRSYSPYERNYPRGYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="7423" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10693"/>
            <exon e_start="11783" e_stop="11800"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.405" acc_prob="0.000" e_score="0.995"/>
          <exon-only e_score="0.778"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7423" e_stop="7513" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="10310" e_stop="10693" e_length="384"/>
          </exon>
          <intron i_serial="7" don_prob="0.405" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10694" i_stop="11782" i_length="1089"/>
          </intron>
          <exon e_serial="8" e_score="0.778">
            <gDNA_exon_boundary e_start="11783" e_stop="11800" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7423" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7465" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572605" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7466" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339475" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7473" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10693"/>
              <exon start="11783" stop="11800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7482" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8616" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290120" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGAT : CTAAAAAAAAAAAATCAT</gDNA_template>
            <first_frame> L  K  L  Q  L  L  H  H  S  S  R  V  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  W  V  P  K  I  S  K  T  F  S  I  *  R  W  A  R  L  F  S  Q  T  L  S  I  *  R  W  A  R  L  F  S  *  T  L  T  L  C  W  K  V  E  T  C  A  I  P  V  I  F  S  L  *  K  E  L  P  S  W  L  *  I  S  G  F  R  P  Q  L  W  K  L  L  L  *  G  S  I  S  L  M  W  T  S  L  D  V  K  E  Y  W  L  M  N  V  C  L  G  Y  T  L  N  V  D  Y  L  *  S  F  *  N  F  M  I :   *  K  K  K  I   </first_frame>
            <second_frame>  *  S  F  N  S  C  I  I  L  V  E  S  I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y  G  Y  R  R  S  P  R  R  S  P  Y  R  G  G  R  D  Y  S  P  R  H  S  P  Y  R  G  G  R  D  Y  S  P  R  R  S  P  Y  A  G  R  S  R  R  A  R  S  R  S  Y  S  P  Y  E  R  N  Y  P  R  G  Y  R  *  V  G  F  V  L  S  Y  G  N  C  F  C  K  D  L  *  V  *  C  G  L  V  L  M  L  K  S  T  G  *  *  M  Y  V  W  V  T  P  *  M  W  I  I  C  N  L  S  E  T  L  *   : S  K  K  K  K  S  </second_frame>
            <third_frame>   K  A  S  T  L  A  S  F  *  S  S  Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  S :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T  M  G  T  E  D  L  Q  D  V  L  H  I  E  V  G  E  I  I  L  P  D  T  L  H  I  E  V  G  E  I  I  L  L  D  A  H  L  M  L  E  G  R  D  V  R  D  P  G  H  I  L  L  M  K  G  T  T  L  V  V  I  D  K  W  V  S  S  S  A  M  E  T  A  F  V  R  I  Y  K  F  D  V  D  *  S  *  C  *  R  V  L  V  N  E  C  M  S  G  L  H  L  E  C  G  L  S  V  I  F  L  K  L  Y  D  :  L  K  K  K  N  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7466" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="10157" stop="10229"/>
                    <exon start="10310" stop="10539"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLRIGNLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDYGYRRSPRRSPYRGGRDYSPRHSPYRGGRDYSPRRSPYAGRSRRARSRSYSPYERNYPRGYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="7423" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10390"/>
            <exon e_start="10430" e_stop="10548"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.975"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7423" e_stop="7513" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="0.975">
            <gDNA_exon_boundary e_start="10310" e_stop="10390" e_length="81"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10391" i_stop="10429" i_length="39"/>
          </intron>
          <exon e_serial="8" e_score="0.966">
            <gDNA_exon_boundary e_start="10430" e_stop="10548" e_length="119"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7423" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310382" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7457" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7482" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8616" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8695" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10390"/>
              <exon start="10430" stop="10548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAG : GTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTC</gDNA_template>
            <first_frame> L  K  L  Q  L  L  H  H  S  S  R  V  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  W  V  P  K  I  S  K  T  F  S  I  *  R :   W  A  R  L  F  S  *  T  L  T  L  C  W  K  V  E  T  C  A  I  P  V  I  F  S  L  *  K  E  L  P  S  W  L  *  I  S  G  F  </first_frame>
            <second_frame>  *  S  F  N  S  C  I  I  L  V  E  S  I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y  G  Y  R  R  S  P  R  R  S  P  Y  R   : G  G  R  D  Y  S  P  R  R  S  P  Y  A  G  R  S  R  R  A  R  S  R  S  Y  S  P  Y  E  R  N  Y  P  R  G  Y  R  *  V  G  F </second_frame>
            <third_frame>   K  A  S  T  L  A  S  F  *  S  S  Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  S :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T  M  G  T  E  D  L  Q  D  V  L  H  I  E  :  V  G  E  I  I  L  L  D  A  H  L  M  L  E  G  R  D  V  R  D  P  G  H  I  L  L  M  K  G  T  T  L  V  V  I  D  K  W  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7466" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="10157" stop="10229"/>
                    <exon start="10310" stop="10390"/>
                    <exon start="10430" stop="10539"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLRIGNLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDYGYRRSPRRSPYRGGRDYSPRRSPYAGRSRRARSRSYSPYERNYPRGYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="7423" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="9468" e_stop="9694"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10318"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.069" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.889"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7423" e_stop="7513" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.971">
            <gDNA_intron_boundary i_start="9378" i_stop="9467" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="9468" e_stop="9694" e_length="227"/>
          </exon>
          <intron i_serial="6" don_prob="0.069" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9695" i_stop="10156" i_length="462"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="8" e_score="0.889">
            <gDNA_exon_boundary e_start="10310" e_stop="10318" e_length="9"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7423" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7431" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="9468" stop="9694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265803" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7481" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="9468" stop="9694"/>
              <exon start="10157" stop="10211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7482" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="9468" stop="9694"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332636" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7482" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="9468" stop="9677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332915" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : AAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATG</gDNA_template>
            <first_frame> L  K  L  Q  L  L  H  H  S  S  R  V  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : E  D  I  T  S  A  L  L  A  A  I  K  D  D  Q  F  F  H  C  N  I  I  F  T  Q  L  D  Q  M  A  R  *  N  S  F  S  H  A  S  D  R  L  N  L  A  T  I  L  P  N  N  Y  T  T  S  A  N  T  S  N  S  Q  L  I  K  G  H  Y  Q  Q  *  N  Q  A  F  M  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  </first_frame>
            <second_frame>  *  S  F  N  S  C  I  I  L  V  E  S  I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  K  T  L  R  Q  L  C  W  Q  Q  S  K  M  I  S  S  S  I  A  T  L  Y  S  L  S  L  T  K  W  P  A  K  T  A  F  H  M  H  L  I  D  *  T  *  Q  L  F  C  Q  T  T  I  Q  P  Q  Q  I  L  Q  T  L  N  *  S  R  V  I  I  N  N  R  I  R  L  L  C :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M </second_frame>
            <third_frame>   K  A  S  T  L  A  S  F  *  S  S  Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  R :   R  H  Y  V  S  F  V  G  S  N  Q  R  *  S  V  L  P  L  Q  H  Y  I  H  S  A  *  P  N  G  P  L  K  Q  L  F  T  C  I  *  S  T  K  L  S  N  Y  F  A  K  Q  L  Y  N  L  S  K  Y  F  K  L  S  T  N  Q  G  S  L  S  T  I  E  S  G  F  Y   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7466" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="9468" stop="9593"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLRIGNLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKKTLRQLCWQQSKMISSSIATLYSLSLTKWPAKTAFHMHLID*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="7477" e_stop="7513"/>
            <exon e_start="7653" e_stop="8381"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7477" e_stop="7513" e_length="37"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="8381" e_length="729"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7477" stop="7513"/>
              <exon start="7653" stop="8272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7478" stop="7513"/>
              <exon start="7653" stop="8381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213264" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7478" stop="7513"/>
              <exon start="7653" stop="8344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379101" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7478" stop="7513"/>
              <exon start="7653" stop="8160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210349" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATGCAAGGGATAAGGTTCAATTTTTTCTCTCTCTTTGATTTGAAGTAATGTTTTCCAGGGAACATCCTAATGAAGTCTCCCACTGTATGGTCGTCAAAGATCCTCCTACTTATTGATAAAATTGGTCATATGCTAAGTCTTTCTTGAGTTAGAAAGTACCAATCAACCTTTATGGATAAGTTTTTGGCATTTTTTACAAGTAAAATTGTTGAGCATGTTAATGG</gDNA_template>
            <first_frame> Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  V  P  L  C  F  F  I  E  L  *  G  F  S  V  Y  L  L  H  R  L  D  P  S  N  F  P  *  L  V  L  S  L  L  G  F  F  C  L  Y  F  A  D  L  Y  F  L  Y  L  V  V  G  L  V  N  G  E  Y  I  V  L  F  I  R  L  V  G  I  S  M  W  C  K  K  I  E  W  G  L  L  D  F  G  E  F  T  L  I  C  V  L  E  R  C  *  C  V  N  L  F  *  *  R  N  G  K  V  *  I  C  F  W  K  N  C  F  *  V  Y  H  V  E  L  V  F  R  L  F  Y  W  G  M  S  L  K  H  K  T  F  L  R  I  S  Y  F  V  Y  M  G  N  S  V  Y  N  K  V  I  N  P  M  P  Y  L  C  K  G  *  G  S  I  F  S  L  S  L  I  *  S  N  V  F  Q  G  T  S  *  *  S  L  P  L  Y  G  R  Q  R  S  S  Y  L  L  I  K  L  V  I  C  *  V  F  L  E  L  E  S  T  N  Q  P  L  W  I  S  F  W  H  F  L  Q  V  K  L  L  S  M  L  M  </first_frame>
            <second_frame>  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R  Y  H  S  V  S  L  *  N  F  E  D  F  L  F  I  C  C  I  D  L  I  R  L  T  F  R  N  W  F  Y  L  Y  *  G  F  F  V  C  I  S  L  I  Y  I  F  F  I  W  L  L  A  L  *  M  V  N  T  L  F  Y  S  S  G  *  L  G  Y  L  C  G  V  K  K  L  N  G  V  C  W  I  L  G  S  S  L  *  F  V  F  W  R  D  V  N  V  L  I  F  F  N  R  E  M  V  R  Y  E  S  V  F  G  R  I  V  F  K  F  I  M  *  N  *  F  S  V  C  F  I  G  E  C  H  *  S  I  K  H  F  *  E  S  H  I  L  Y  I  W  V  I  L  Y  I  I  K  S  L  I  L  C  L  T  Y  A  R  D  K  V  Q  F  F  L  S  L  *  F  E  V  M  F  S  R  E  H  P  N  E  V  S  H  C  M  V  V  K  D  P  P  T  Y  *  *  N  W  S  Y  A  K  S  F  L  S  *  K  V  P  I  N  L  Y  G  *  V  F  G  I  F  Y  K  *  N  C  *  A  C  *  W </second_frame>
            <third_frame>   L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K  G  T  T  L  F  L  Y  R  T  L  R  I  F  C  L  F  V  A  S  T  *  S  V  *  L  S  V  I  G  F  I  F  I  R  V  F  L  S  V  F  R  *  S  I  F  S  L  F  G  C  W  P  C  E  W  *  I  H  C  F  I  H  Q  A  S  W  D  I  Y  V  V  *  K  N  *  M  G  F  V  G  F  W  G  V  H  F  D  L  C  F  G  E  M  L  M  C  *  S  F  L  I  E  K  W  *  G  M  N  L  F  L  E  E  L  F  L  S  L  S  C  R  I  S  F  P  F  V  L  L  G  N  V  T  E  A  *  N  I  S  E  N  L  I  F  C  I  Y  G  *  F  C  I  *  *  S  H  *  S  Y  A  L  L  M  Q  G  I  R  F  N  F  F  S  L  F  D  L  K  *  C  F  P  G  N  I  L  M  K  S  P  T  V  W  S  S  K  I  L  L  L  I  D  K  I  G  H  M  L  S  L  S  *  V  R  K  Y  Q  S  T  F  M  D  K  F  L  A  F  F  T  S  K  I  V  E  H  V  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7754" stop="7954"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVLSLLGFFCLYFADLYFLYLVVGLVNGEYIVLFIRLVGISMWCKKIEWGLLDFGEFTLICVLERC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="7423" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="9495" e_stop="9694"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10719"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="0.991"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.069" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7423" e_stop="7513" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.000">
            <gDNA_intron_boundary i_start="9378" i_stop="9494" i_length="117"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="9495" e_stop="9694" e_length="200"/>
          </exon>
          <intron i_serial="6" don_prob="0.069" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9695" i_stop="10156" i_length="462"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="8" e_score="0.997">
            <gDNA_exon_boundary e_start="10310" e_stop="10719" e_length="410"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7423" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8675" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="9495" stop="9694"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10405" stop="10719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229063" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : CAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAACTATACAACCTCAGCAAATACTTCAAACTCTCAACTAATCAAGGGTCATTATCAACAATAGAATCAGGCTTTTATG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTC</gDNA_template>
            <first_frame> L  K  L  Q  L  L  H  H  S  S  R  V  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : A  I  K  D  D  Q  F  F  H  C  N  I  I  F  T  Q  L  D  Q  M  A  R  *  N  S  F  S  H  A  S  D  R  L  N  L  A  T  I  L  P  N  N  Y  T  T  S  A  N  T  S  N  S  Q  L  I  K  G  H  Y  Q  Q  *  N  Q  A  F  M  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y  G  Y  R  R  S  P  R  R  S  P  Y  R  G  G  R  D  Y  S  P  R  H  S  P  Y  R  G  G  R  D  Y  S  P  R  R  S  P  Y  A  G  R  S  R  R  A  R  S  R  S  Y  S  P  Y  E  R  N  Y  P  R  G  Y  R  *  V  G  F  V  L  S  Y  G  N  C  F  C  K  D  L  *  V  *  C  G  L  V  L  M  L  K  S  T  G  *  *  M  Y  V  W  V  T  P  *  M  W  I  I  C  N  L  S  E  T  L  *  C  M  Y  S  L  S  L  L  V </first_frame>
            <second_frame>  *  S  F  N  S  C  I  I  L  V  E  S  I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  Q  S  K  M  I  S  S  S  I  A  T  L  Y  S  L  S  L  T  K  W  P  A  K  T  A  F  H  M  H  L  I  D  *  T  *  Q  L  F  C  Q  T  T  I  Q  P  Q  Q  I  L  Q  T  L  N  *  S  R  V  I  I  N  N  R  I  R  L  L  C :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T  M  G  T  E  D  L  Q  D  V  L  H  I  E  V  G  E  I  I  L  P  D  T  L  H  I  E  V  G  E  I  I  L  L  D  A  H  L  M  L  E  G  R  D  V  R  D  P  G  H  I  L  L  M  K  G  T  T  L  V  V  I  D  K  W  V  S  S  S  A  M  E  T  A  F  V  R  I  Y  K  F  D  V  D  *  S  *  C  *  R  V  L  V  N  E  C  M  S  G  L  H  L  E  C  G  L  S  V  I  F  L  K  L  Y  D  V  C  I  L  F  R  C  L   </second_frame>
            <third_frame>   K  A  S  T  L  A  S  F  *  S  S  Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  S :   N  Q  R  *  S  V  L  P  L  Q  H  Y  I  H  S  A  *  P  N  G  P  L  K  Q  L  F  T  C  I  *  S  T  K  L  S  N  Y  F  A  K  Q  L  Y  N  L  S  K  Y  F  K  L  S  T  N  Q  G  S  L  S  T  I  E  S  G  F  Y   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  W  V  P  K  I  S  K  T  F  S  I  *  R  W  A  R  L  F  S  Q  T  L  S  I  *  R  W  A  R  L  F  S  *  T  L  T  L  C  W  K  V  E  T  C  A  I  P  V  I  F  S  L  *  K  E  L  P  S  W  L  *  I  S  G  F  R  P  Q  L  W  K  L  L  L  *  G  S  I  S  L  M  W  T  S  L  D  V  K  E  Y  W  L  M  N  V  C  L  G  Y  T  L  N  V  D  Y  L  *  S  F  *  N  F  M  M  Y  V  F  S  F  V  A  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7466" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="9495" stop="9593"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLRIGNLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKQSKMISSSIATLYSLSLTKWPAKTAFHMHLID*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="7" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9657" stop="9694"/>
                    <exon start="10157" stop="10229"/>
                    <exon start="10310" stop="10603"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRVIINNRIRLLCLVENGQGLQHLVIILGFIRAQGVMVIMVIGVGIVAVVTMGTEDLQDVLHIEVGEIILPDTLHIEVGEIILLDAHLMLEGRDVRDPGHILLMKGTTLVVIDKWVSSSAMETAFVRIYKFDVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="7474" e_stop="7513"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9377"/>
            <exon e_start="10157" e_stop="10229"/>
            <exon e_start="10310" e_stop="10719"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7474" e_stop="7513" e_length="40"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7514" i_stop="8612" i_length="1099"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="2" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9377" e_length="150"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.985">
            <gDNA_intron_boundary i_start="9378" i_stop="10156" i_length="779"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10157" e_stop="10229" e_length="73"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="10310" e_stop="10719" e_length="410"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7474" stop="7513"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8616" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9377"/>
              <exon start="10157" stop="10229"/>
              <exon start="10310" stop="10338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10405" stop="10719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229063" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAG : TCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTCGTTGCTTGTC</gDNA_template>
            <first_frame> S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  S :   L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T  M  G  T  E  D  L  Q  D  V  L  H  I  E  V  G  E  I  I  L  P  D  T  L  H  I  E  V  G  E  I  I  L  L  D  A  H  L  M  L  E  G  R  D  V  R  D  P  G  H  I  L  L  M  K  G  T  T  L  V  V  I  D  K  W  V  S  S  S  A  M  E  T  A  F  V  R  I  Y  K  F  D  V  D  *  S  *  C  *  R  V  L  V  N  E  C  M  S  G  L  H  L  E  C  G  L  S  V  I  F  L  K  L  Y  D  V  C  I  L  F  R  C  L   </first_frame>
            <second_frame>  R  I  G  N  L  G  F  A  P  S  S  E  M  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E   : V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  W  V  P  K  I  S  K  T  F  S  I  *  R  W  A  R  L  F  S  Q  T  L  S  I  *  R  W  A  R  L  F  S  *  T  L  T  L  C  W  K  V  E  T  C  A  I  P  V  I  F  S  L  *  K  E  L  P  S  W  L  *  I  S  G  F  R  P  Q  L  W  K  L  L  L  *  G  S  I  S  L  M  W  T  S  L  D  V  K  E  Y  W  L  M  N  V  C  L  G  Y  T  L  N  V  D  Y  L  *  S  F  *  N  F  M  M  Y  V  F  S  F  V  A  C  </second_frame>
            <third_frame>   V  L  A  I  *  G  S  L  H  H  P  K  W :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  :  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y  G  Y  R  R  S  P  R  R  S  P  Y  R  G  G  R  D  Y  S  P  R  H  S  P  Y  R  G  G  R  D  Y  S  P  R  R  S  P  Y  A  G  R  S  R  R  A  R  S  R  S  Y  S  P  Y  E  R  N  Y  P  R  G  Y  R  *  V  G  F  V  L  S  Y  G  N  C  F  C  K  D  L  *  V  *  C  G  L  V  L  M  L  K  S  T  G  *  *  M  Y  V  W  V  T  P  *  M  W  I  I  C  N  L  S  E  T  L  *  C  M  Y  S  L  S  L  L  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7491" stop="7513"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9377"/>
                    <exon start="10157" stop="10229"/>
                    <exon start="10310" stop="10539"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLHHPKWYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDYGYRRSPRRSPYRGGRDYSPRHSPYRGGRDYSPRRSPYAGRSRRARSRSYSPYERNYPRGYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="9">
          <exon_coordinates>
            <exon e_start="9909" e_stop="10229"/>
            <exon e_start="10310" e_stop="10709"/>
            <exon e_start="11763" e_stop="11796"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.952"/>
          <exon-only e_score="0.706"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="9909" e_stop="10229" e_length="321"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="10230" i_stop="10309" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="0.952">
            <gDNA_exon_boundary e_start="10310" e_stop="10709" e_length="400"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10710" i_stop="11762" i_length="1053"/>
          </intron>
          <exon e_serial="3" e_score="0.706">
            <gDNA_exon_boundary e_start="11763" e_stop="11796" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9909" stop="10229"/>
              <exon start="10310" stop="10619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9985" stop="10229"/>
              <exon start="10310" stop="10709"/>
              <exon start="11763" stop="11796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395674" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="9" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAGTGCATTTGGTGATTCTCTTTTCTTTGGATGTTAGCATCATAGGTTATGATTTCATAGAATTACAAATATTTCTGTTTTTTTTTGTTGTGAAGAGAACACCCGATATTAGCAATTTCATATTCTTCCATTACAAGGAATTCATTCTCTAGAATACATTATCTGGTCGAGATAACCCATTTGTTCTTGATGTAAATCACATATGTTCAGATTTCACATATTGAGATGATCTATTTTGTTTTTCAGTCTCGTAGAAAACGGCCAAGGACTCCAACACCTGGTCATTATCTTGGGCTTCATCAGAGCGCAAGGGGTGATG : GTTATCATGGTGATCGGGGTAGGTATCGTGGCCGTGGTGACTATGGGTACCGAAGATCTCCAAGACGTTCTCCATATAGAGGTGGGCGAGATTATTCTCCCAGACACTCTCCATATAGAGGTGGGCGAGATTATTCTCCTAGACGCTCACCTTATGCTGGAAGGTCGAGACGTGCGCGATCCCGGTCATATTCTCCTTATGAAAGGAACTACCCTCGTGGTTATAGATAAGTGGGTTTCGTCCTCAGCTATGGAAACTGCTTTTGTAAGGATCTATAAGTTTGATGTGGACTAGTCTTGATGTTAAAGAGTACTGGTTAATGAATGTATGTCTGGGTTACACCTTGAATGTGGATTATCTGTAATCTTTCTGAAACTTTATGATGTATGTATTCTCTTTC : AAAAAAAAAGTAGTATCTACCTAAAAAAAAAAAA</gDNA_template>
            <first_frame> R  S  A  F  G  D  S  L  F  F  G  C  *  H  H  R  L  *  F  H  R  I  T  N  I  S  V  F  F  C  C  E  E  N  T  R  Y  *  Q  F  H  I  L  P  L  Q  G  I  H  S  L  E  Y  I  I  W  S  R  *  P  I  C  S  *  C  K  S  H  M  F  R  F  H  I  L  R  *  S  I  L  F  F  S  L  V  E  N  G  Q  G  L  Q  H  L  V  I  I  L  G  F  I  R  A  Q  G  V  M  :  V  I  M  V  I  G  V  G  I  V  A  V  V  T  M  G  T  E  D  L  Q  D  V  L  H  I  E  V  G  E  I  I  L  P  D  T  L  H  I  E  V  G  E  I  I  L  L  D  A  H  L  M  L  E  G  R  D  V  R  D  P  G  H  I  L  L  M  K  G  T  T  L  V  V  I  D  K  W  V  S  S  S  A  M  E  T  A  F  V  R  I  Y  K  F  D  V  D  *  S  *  C  *  R  V  L  V  N  E  C  M  S  G  L  H  L  E  C  G  L  S  V  I  F  L  K  L  Y  D  V  C  I  L  F   : Q  K  K  S  S  I  Y  L  K  K  K   </first_frame>
            <second_frame>  G  V  H  L  V  I  L  F  S  L  D  V  S  I  I  G  Y  D  F  I  E  L  Q  I  F  L  F  F  F  V  V  K  R  T  P  D  I  S  N  F  I  F  F  H  Y  K  E  F  I  L  *  N  T  L  S  G  R  D  N  P  F  V  L  D  V  N  H  I  C  S  D  F  T  Y  *  D  D  L  F  C  F  S  V  S  *  K  T  A  K  D  S  N  T  W  S  L  S  W  A  S  S  E  R  K  G  *  W :   L  S  W  *  S  G  *  V  S  W  P  W  *  L  W  V  P  K  I  S  K  T  F  S  I  *  R  W  A  R  L  F  S  Q  T  L  S  I  *  R  W  A  R  L  F  S  *  T  L  T  L  C  W  K  V  E  T  C  A  I  P  V  I  F  S  L  *  K  E  L  P  S  W  L  *  I  S  G  F  R  P  Q  L  W  K  L  L  L  *  G  S  I  S  L  M  W  T  S  L  D  V  K  E  Y  W  L  M  N  V  C  L  G  Y  T  L  N  V  D  Y  L  *  S  F  *  N  F  M  M  Y  V  F  S  F  :  K  K  K  V  V  S  T  *  K  K  K  </second_frame>
            <third_frame>   E  C  I  W  *  F  S  F  L  W  M  L  A  S  *  V  M  I  S  *  N  Y  K  Y  F  C  F  F  L  L  *  R  E  H  P  I  L  A  I  S  Y  S  S  I  T  R  N  S  F  S  R  I  H  Y  L  V  E  I  T  H  L  F  L  M  *  I  T  Y  V  Q  I  S  H  I  E  M  I  Y  F  V  F  Q  S  R  R  K  R  P  R  T  P  T  P  G  H  Y  L  G  L  H  Q  S  A  R  G  D   : G  Y  H  G  D  R  G  R  Y  R  G  R  G  D  Y  G  Y  R  R  S  P  R  R  S  P  Y  R  G  G  R  D  Y  S  P  R  H  S  P  Y  R  G  G  R  D  Y  S  P  R  R  S  P  Y  A  G  R  S  R  R  A  R  S  R  S  Y  S  P  Y  E  R  N  Y  P  R  G  Y  R  *  V  G  F  V  L  S  Y  G  N  C  F  C  K  D  L  *  V  *  C  G  L  V  L  M  L  K  S  T  G  *  *  M  Y  V  W  V  T  P  *  M  W  I  I  C  N  L  S  E  T  L  *  C  M  Y  S  L  S :   K  K  K  *  Y  L  P  K  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10140" stop="10229"/>
                    <exon start="10310" stop="10603"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SILFFSLVENGQGLQHLVIILGFIRAQGVMVIMVIGVGIVAVVTMGTEDLQDVLHIEVGEIILPDTLHIEVGEIILLDAHLMLEGRDVRDPGHILLMKGTTLVVIDKWVSSSAMETAFVRIYKFDVD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="9" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10106" stop="10229"/>
                    <exon start="10310" stop="10539"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITYVQISHIEMIYFVFQSRRKRPRTPTPGHYLGLHQSARGDGYHGDRGRYRGRGDYGYRRSPRRSPYRGGRDYSPRHSPYRGGRDYSPRRSPYAGRSRRARSRSYSPYERNYPRGYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="10">
          <exon_coordinates>
            <exon e_start="7423" e_stop="7513"/>
            <exon e_start="7653" e_stop="7672"/>
            <exon e_start="8613" e_stop="8723"/>
            <exon e_start="8812" e_stop="8911"/>
            <exon e_start="9228" e_stop="9619"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.531" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7423" e_stop="7513" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="7514" i_stop="7652" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7653" e_stop="7672" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.935">
            <gDNA_intron_boundary i_start="7673" i_stop="8612" i_length="940"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8613" e_stop="8723" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.962" acc_prob="0.531">
            <gDNA_intron_boundary i_start="8724" i_stop="8811" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8812" e_stop="8911" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.997">
            <gDNA_intron_boundary i_start="8912" i_stop="9227" i_length="316"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9228" e_stop="9619" e_length="392"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7423" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7461" stop="7513"/>
              <exon start="7653" stop="7672"/>
              <exon start="8613" stop="8723"/>
              <exon start="8812" stop="8911"/>
              <exon start="9228" stop="9619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344591" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="10" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAAAGCTTCAACTCTTGCATCATTCTAGTCGAGTCAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATG : GCTGATTCTCCACGCAAAAG : GTATTCCCGCTCTCCTTCACCTTGGGAAGAAAAGTCAAGATCTCGCTCTCGATCCCCAACTAGATCACAGTCAAGGCCAAGAGGAAGATCAAGGTCCAGAAGTCATGGAAG : GGCTGAAGATACTAATCCTGGAAACACACTCTATGTGACTGGATTATCTTCAAGGGTCACTCAAAGGGATCTTGAAGAGCATTTCTCAAAGGAGGGAAAG : GTGAAGTCAGCTTTTCTGGTTGTGGAGCCCCGTTCTCGCATCTCTCGTGGTTTTGCTTTCATAACAATGGATAGTCTTGAGGATGCCAATCGCTGCATTAAGCACCTTAATCAGTCCGTCCTTGAAGGCCGGTCCATAACGGTGGAGAAGGTCAGCTATTTATACATTGATTGGTGAACCATTGTTCTGTTGGCTTGCTTTTCTTTTTTCTTGACTTGGAGGTTTTCTGATTATATTCAGAAGACATTACGTCAGCTTTGTTGGCAGCAATCAAAGATGATCAGTTCTTCCATTGCAACATTATATTCACTCAGCTTGACCAAATGGCCCGCTAAAACAGCTTTTCACATGCATCTGATCGACTAAACTTAGCAACTATTTTGCCAAACAAC</gDNA_template>
            <first_frame> L  K  L  Q  L  L  H  H  S  S  R  V  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N   : G  *  F  S  T  Q  K  :  V  F  P  L  S  F  T  L  G  R  K  V  K  I  S  L  S  I  P  N  *  I  T  V  K  A  K  R  K  I  K  V  Q  K  S  W  K  :  G  *  R  Y  *  S  W  K  H  T  L  C  D  W  I  I  F  K  G  H  S  K  G  S  *  R  A  F  L  K  G  G  K   : G  E  V  S  F  S  G  C  G  A  P  F  S  H  L  S  W  F  C  F  H  N  N  G  *  S  *  G  C  Q  S  L  H  *  A  P  *  S  V  R  P  *  R  P  V  H  N  G  G  E  G  Q  L  F  I  H  *  L  V  N  H  C  S  V  G  L  L  F  F  F  L  D  L  E  V  F  *  L  Y  S  E  D  I  T  S  A  L  L  A  A  I  K  D  D  Q  F  F  H  C  N  I  I  F  T  Q  L  D  Q  M  A  R  *  N  S  F  S  H  A  S  D  R  L  N  L  A  T  I  L  P  N  N </first_frame>
            <second_frame>  *  S  F  N  S  C  I  I  L  V  E  S  I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  :  A  D  S  P  R  K  R :   Y  S  R  S  P  S  P  W  E  E  K  S  R  S  R  S  R  S  P  T  R  S  Q  S  R  P  R  G  R  S  R  S  R  S  H  G  R :   A  E  D  T  N  P  G  N  T  L  Y  V  T  G  L  S  S  R  V  T  Q  R  D  L  E  E  H  F  S  K  E  G  K  :  V  K  S  A  F  L  V  V  E  P  R  S  R  I  S  R  G  F  A  F  I  T  M  D  S  L  E  D  A  N  R  C  I  K  H  L  N  Q  S  V  L  E  G  R  S  I  T  V  E  K  V  S  Y  L  Y  I  D  W  *  T  I  V  L  L  A  C  F  S  F  F  L  T  W  R  F  S  D  Y  I  Q  K  T  L  R  Q  L  C  W  Q  Q  S  K  M  I  S  S  S  I  A  T  L  Y  S  L  S  L  T  K  W  P  A  K  T  A  F  H  M  H  L  I  D  *  T  *  Q  L  F  C  Q  T   </second_frame>
            <third_frame>   K  A  S  T  L  A  S  F  *  S  S  Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W :   L  I  L  H  A  K   : G  I  P  A  L  L  H  L  G  K  K  S  Q  D  L  A  L  D  P  Q  L  D  H  S  Q  G  Q  E  E  D  Q  G  P  E  V  M  E   : G  L  K  I  L  I  L  E  T  H  S  M  *  L  D  Y  L  Q  G  S  L  K  G  I  L  K  S  I  S  Q  R  R  E  R :   *  S  Q  L  F  W  L  W  S  P  V  L  A  S  L  V  V  L  L  S  *  Q  W  I  V  L  R  M  P  I  A  A  L  S  T  L  I  S  P  S  L  K  A  G  P  *  R  W  R  R  S  A  I  Y  T  L  I  G  E  P  L  F  C  W  L  A  F  L  F  S  *  L  G  G  F  L  I  I  F  R  R  H  Y  V  S  F  V  G  S  N  Q  R  *  S  V  L  P  L  Q  H  Y  I  H  S  A  *  P  N  G  P  L  K  Q  L  F  T  C  I  *  S  T  K  L  S  N  Y  F  A  K  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="10" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7466" stop="7513"/>
                    <exon start="7653" stop="7672"/>
                    <exon start="8613" stop="8723"/>
                    <exon start="8812" stop="8911"/>
                    <exon start="9228" stop="9404"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLRIGNLGFAPSSEMADSPRKRYSRSPSPWEEKSRSRSRSPTRSQSRPRGRSRSRSHGRAEDTNPGNTLYVTGLSSRVTQRDLEEHFSKEGKVKSAFLVVEPRSRISRGFAFITMDSLEDANRCIKHLNQSVLEGRSITVEKVSYLYIDW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="11">
          <exon_coordinates>
            <exon e_start="7458" e_stop="8160"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7458" e_stop="8160" e_length="703"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7458" stop="8160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322597" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="11" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTTAGGGATCGCTTCGTATTGGCAATTTAGGGTTCGCTCCATCATCCGAAATGGCAAGCTTTGCTCTCTCTAATCTCCCATTATATCTTTCTTCTATTTAACATATATGTGTTTTTTTGCATATTTTCAGAATTTTTTAACCTAATTAATTGTCGAAACAACAAATTTTATCATCTTTATGATTTCTTGCAGGCTGATTCTCCACGCAAAAGGTACCACTCTGTTTCTTTATAGAACTTTGAGGATTTTCTGTTTATTTGTTGCATCGACTTGATCCGTCTAACTTTCCGTAATTGGTTTTATCTTTATTAGGGTTTTTTTGTCTGTATTTCGCTGATCTATATTTTCTTTATTTGGTTGTTGGCCTTGTGAATGGTGAATACATTGTTTTATTCATCAGGCTAGTTGGGATATCTATGTGGTGTAAAAAAATTGAATGGGGTTTGTTGGATTTTGGGGAGTTCACTTTGATTTGTGTTTTGGAGAGATGTTAATGTGTTAATCTTTTTTAATAGAGAAATGGTAAGGTATGAATCTGTTTTTGGAAGAATTGTTTTTAAGTTTATCATGTAGAATTAGTTTTCCGTTTGTTTTATTGGGGAATGTCACTGAAGCATAAAACATTTCTGAGAATCTCATATTTTGTATATATGGGTAATTCTGTATATAATAAAGTCATTAATCCTATGCCTTACTTATG</gDNA_template>
            <first_frame> Q  F  R  D  R  F  V  L  A  I  *  G  S  L  H  H  P  K  W  Q  A  L  L  S  L  I  S  H  Y  I  F  L  L  F  N  I  Y  V  F  F  C  I  F  S  E  F  F  N  L  I  N  C  R  N  N  K  F  Y  H  L  Y  D  F  L  Q  A  D  S  P  R  K  R  Y  H  S  V  S  L  *  N  F  E  D  F  L  F  I  C  C  I  D  L  I  R  L  T  F  R  N  W  F  Y  L  Y  *  G  F  F  V  C  I  S  L  I  Y  I  F  F  I  W  L  L  A  L  *  M  V  N  T  L  F  Y  S  S  G  *  L  G  Y  L  C  G  V  K  K  L  N  G  V  C  W  I  L  G  S  S  L  *  F  V  F  W  R  D  V  N  V  L  I  F  F  N  R  E  M  V  R  Y  E  S  V  F  G  R  I  V  F  K  F  I  M  *  N  *  F  S  V  C  F  I  G  E  C  H  *  S  I  K  H  F  *  E  S  H  I  L  Y  I  W  V  I  L  Y  I  I  K  S  L  I  L  C  L  T  Y  </first_frame>
            <second_frame>  N  L  G  I  A  S  Y  W  Q  F  R  V  R  S  I  I  R  N  G  K  L  C  S  L  *  S  P  I  I  S  F  F  Y  L  T  Y  M  C  F  F  A  Y  F  Q  N  F  L  T  *  L  I  V  E  T  T  N  F  I  I  F  M  I  S  C  R  L  I  L  H  A  K  G  T  T  L  F  L  Y  R  T  L  R  I  F  C  L  F  V  A  S  T  *  S  V  *  L  S  V  I  G  F  I  F  I  R  V  F  L  S  V  F  R  *  S  I  F  S  L  F  G  C  W  P  C  E  W  *  I  H  C  F  I  H  Q  A  S  W  D  I  Y  V  V  *  K  N  *  M  G  F  V  G  F  W  G  V  H  F  D  L  C  F  G  E  M  L  M  C  *  S  F  L  I  E  K  W  *  G  M  N  L  F  L  E  E  L  F  L  S  L  S  C  R  I  S  F  P  F  V  L  L  G  N  V  T  E  A  *  N  I  S  E  N  L  I  F  C  I  Y  G  *  F  C  I  *  *  S  H  *  S  Y  A  L  L  M </second_frame>
            <third_frame>   I  *  G  S  L  R  I  G  N  L  G  F  A  P  S  S  E  M  A  S  F  A  L  S  N  L  P  L  Y  L  S  S  I  *  H  I  C  V  F  L  H  I  F  R  I  F  *  P  N  *  L  S  K  Q  Q  I  L  S  S  L  *  F  L  A  G  *  F  S  T  Q  K  V  P  L  C  F  F  I  E  L  *  G  F  S  V  Y  L  L  H  R  L  D  P  S  N  F  P  *  L  V  L  S  L  L  G  F  F  C  L  Y  F  A  D  L  Y  F  L  Y  L  V  V  G  L  V  N  G  E  Y  I  V  L  F  I  R  L  V  G  I  S  M  W  C  K  K  I  E  W  G  L  L  D  F  G  E  F  T  L  I  C  V  L  E  R  C  *  C  V  N  L  F  *  *  R  N  G  K  V  *  I  C  F  W  K  N  C  F  *  V  Y  H  V  E  L  V  F  R  L  F  Y  W  G  M  S  L  K  H  K  T  F  L  R  I  S  Y  F  V  Y  M  G  N  S  V  Y  N  K  V  I  N  P  M  P  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="11" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7491" stop="7694"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLHHPKWQALLSLISHYIFLLFNIYVFFCIFSEFFNLINCRNNKFYHLYDFLQADSPRKRYHSVSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="11" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7754" stop="7954"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVLSLLGFFCLYFADLYFLYLVVGLVNGEYIVLFIRLVGISMWCKKIEWGLLDFGEFTLICVLERC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="11806" PGL_stop="10369"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11806" e_stop="11783"/>
            <exon e_start="10718" e_stop="10369"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.750">
            <gDNA_exon_boundary e_start="11806" e_stop="11783" e_length="24"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11782" i_stop="10719" i_length="1064"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="10718" e_stop="10369" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11806" stop="11783"/>
              <exon start="10718" stop="10369"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228775" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGTAATGATTTTTTTTTTTTAG : ACAAGCAACGAAAGAGAATACATACATCATAAAGTTTCAGAAAGATTACAGATAATCCACATTCAAGGTGTAACCCAGACATACATTCATTAACCAGTACTCTTTAACATCAAGACTAGTCCACATCAAACTTATAGATCCTTACAAAAGCAGTTTCCATAGCTGAGGACGAAACCCACTTATCTATAACCACGAGGGTAGTTCCTTTCATAAGGAGAATATGACCGGGATCGCGCACGTCTCGACCTTCCAGCATAAGGTGAGCGTCTAGGAGAATAATCTCGCCCACCTCTATATGGAGAGTGTCTGGGAGAATAATCTCGCCCACCTCTATATGGAGAACGTCTTGG</gDNA_template>
            <first_frame> F  V  M  I  F  F  F  *  :  T  S  N  E  R  E  Y  I  H  H  K  V  S  E  R  L  Q  I  I  H  I  Q  G  V  T  Q  T  Y  I  H  *  P  V  L  F  N  I  K  T  S  P  H  Q  T  Y  R  S  L  Q  K  Q  F  P  *  L  R  T  K  P  T  Y  L  *  P  R  G  *  F  L  S  *  G  E  Y  D  R  D  R  A  R  L  D  L  P  A  *  G  E  R  L  G  E  *  S  R  P  P  L  Y  G  E  C  L  G  E  *  S  R  P  P  L  Y  G  E  R  L   </first_frame>
            <second_frame>  L  *  *  F  F  F  F  R :   Q  A  T  K  E  N  T  Y  I  I  K  F  Q  K  D  Y  R  *  S  T  F  K  V  *  P  R  H  T  F  I  N  Q  Y  S  L  T  S  R  L  V  H  I  K  L  I  D  P  Y  K  S  S  F  H  S  *  G  R  N  P  L  I  Y  N  H  E  G  S  S  F  H  K  E  N  M  T  G  I  A  H  V  S  T  F  Q  H  K  V  S  V  *  E  N  N  L  A  H  L  Y  M  E  S  V  W  E  N  N  L  A  H  L  Y  M  E  N  V  L  </second_frame>
            <third_frame>   C  N  D  F  F  F  L   : D  K  Q  R  K  R  I  H  T  S  *  S  F  R  K  I  T  D  N  P  H  S  R  C  N  P  D  I  H  S  L  T  S  T  L  *  H  Q  D  *  S  T  S  N  L  *  I  L  T  K  A  V  S  I  A  E  D  E  T  H  L  S  I  T  T  R  V  V  P  F  I  R  R  I  *  P  G  S  R  T  S  R  P  S  S  I  R  *  A  S  R  R  I  I  S  P  T  S  I  W  R  V  S  G  R  I  I  S  P  T  S  I  W  R  T  S  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="12495" PGL_stop="22683"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12495" e_stop="12864"/>
            <exon e_start="13985" e_stop="14197"/>
            <exon e_start="14293" e_stop="14345"/>
            <exon e_start="14444" e_stop="14500"/>
            <exon e_start="15016" e_stop="15081"/>
            <exon e_start="15175" e_stop="15246"/>
            <exon e_start="15650" e_stop="15759"/>
            <exon e_start="15834" e_stop="15925"/>
            <exon e_start="16028" e_stop="16094"/>
            <exon e_start="16284" e_stop="17040"/>
            <exon e_start="17300" e_stop="17314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.433" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.796" acc_prob="0.519" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.753" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.989"/>
          <exon-only e_score="0.867"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="12495" e_stop="12864" e_length="370"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12865" i_stop="13984" i_length="1120"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13985" e_stop="14197" e_length="213"/>
          </exon>
          <intron i_serial="2" don_prob="0.433" acc_prob="0.970">
            <gDNA_intron_boundary i_start="14198" i_stop="14292" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14293" e_stop="14345" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.796" acc_prob="0.519">
            <gDNA_intron_boundary i_start="14346" i_stop="14443" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="14444" e_stop="14500" e_length="57"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.969">
            <gDNA_intron_boundary i_start="14501" i_stop="15015" i_length="515"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="15016" e_stop="15081" e_length="66"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15082" i_stop="15174" i_length="93"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15175" e_stop="15246" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.954" acc_prob="0.998">
            <gDNA_intron_boundary i_start="15247" i_stop="15649" i_length="403"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="15650" e_stop="15759" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="0.985" acc_prob="0.753">
            <gDNA_intron_boundary i_start="15760" i_stop="15833" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="15834" e_stop="15925" e_length="92"/>
          </exon>
          <intron i_serial="8" don_prob="0.976" acc_prob="0.997">
            <gDNA_intron_boundary i_start="15926" i_stop="16027" i_length="102"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="16028" e_stop="16094" e_length="67"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="16095" i_stop="16283" i_length="189"/>
          </intron>
          <exon e_serial="10" e_score="0.989">
            <gDNA_exon_boundary e_start="16284" e_stop="17040" e_length="757"/>
          </exon>
          <intron i_serial="10" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17041" i_stop="17299" i_length="259"/>
          </intron>
          <exon e_serial="11" e_score="0.867">
            <gDNA_exon_boundary e_start="17300" e_stop="17314" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12495" stop="12864"/>
              <exon start="13985" stop="14197"/>
              <exon start="14293" stop="14345"/>
              <exon start="14444" stop="14500"/>
              <exon start="15016" stop="15081"/>
              <exon start="15175" stop="15246"/>
              <exon start="15650" stop="15759"/>
              <exon start="15834" stop="15925"/>
              <exon start="16028" stop="16094"/>
              <exon start="16284" stop="17014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12505" stop="12864"/>
              <exon start="13985" stop="14150"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12507" stop="12864"/>
              <exon start="13985" stop="14197"/>
              <exon start="14293" stop="14321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12509" stop="12864"/>
              <exon start="13985" stop="14197"/>
              <exon start="14293" stop="14345"/>
              <exon start="14444" stop="14500"/>
              <exon start="15016" stop="15081"/>
              <exon start="15175" stop="15185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12510" stop="12864"/>
              <exon start="13985" stop="14197"/>
              <exon start="14293" stop="14345"/>
              <exon start="14444" stop="14498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14133" stop="14197"/>
              <exon start="14293" stop="14345"/>
              <exon start="14444" stop="14500"/>
              <exon start="15016" stop="15081"/>
              <exon start="15175" stop="15246"/>
              <exon start="15650" stop="15759"/>
              <exon start="15834" stop="15925"/>
              <exon start="16028" stop="16094"/>
              <exon start="16284" stop="16464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484933" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14133" stop="14197"/>
              <exon start="14293" stop="14345"/>
              <exon start="14444" stop="14500"/>
              <exon start="15016" stop="15081"/>
              <exon start="15175" stop="15246"/>
              <exon start="15650" stop="15721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15078" stop="15081"/>
              <exon start="15175" stop="15246"/>
              <exon start="15650" stop="15759"/>
              <exon start="15834" stop="15891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16507" stop="17040"/>
              <exon start="17300" stop="17314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309576" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACAACAAATATTTTTGTCTTCTCCACCTAATTTATTTTATCCCTAAATCCCCCCCTTTTTTTTTCCTCCTCTCTCTGTAAACCCACATTGAATTTATTGTCTAACAATGCTCGGCGTTGAGTTAAGGATCTCCACCGTCGCCGGAGTTTTCACCGATCTACCGGAAACAAGTCGCCGGAGTGCCAGCTGGAACTGTAACTCCTCCATTGGAAATATCTCATATCATCTCTCTTCCAGAAATAGGCATTGTAGAAAGTCCAGATTCATGGTAATCTGTAGCAAGTCATCACGCGGAAGCTTTAATCGGAAATCTAATCAGAGTGATGAACCGGGTGATGATTATATTGAAGCTGTCGTTCTCGTTTCAG : AGACTATGAAGCACTACAAAATGCATATGGGTGGATTTCAAGAAGAAACAAGATGGCACTCATCTGCTCAGCTGATTCCCTCTTCTTTTCATCCTAAGGATCGTATTGCTAATGCATCATCTTTAGGGACAGGATTTCTTCGCCGTTTCAAGAATCCAACTATTTTTCTTAAGATTTCCTGTGATGCAGAATATGTCTTACCAATTATTGTTG : GAGAACATGCTGTCGAAAAACTTATAGATTCATTGCATGAGGAGGAGACTGGG : GATTGCCCCGACGAGTTCCTGCTTTTGAGGAATCTATTGTTGAAATCTGGCTATGAA : GTTAAAATGGTGAAGATTACAGAAAGAGTGACTAGTACTTATTTTGCCAGAATATTTTTCCACAAG : GCAGGGGAAAAAGATATTATTAGTGTGGATGCTCGTCCCTCCGATGCCATTAATGTTGCCAGAAGATGTAAG : GCACCAATATTTGTGAATAAGCAAATTGTCTTGACTGATGCAACTAGAATAGGTTATGGAATGGACCGATCTAGCAGAATTAAGTCCACCTATGATGTATTACTAGATAG : TGCATCAGATGGCCCCGATTTACTTTCTGAAGAACTTAGTATGTTGAGAAATATGAACTTAGCAGTGAATGAGGAGAGGTACAATGATGCAG : CTGTGTGGAAGGACAAACTGATGAGACTTCGTGAGTTCAAGACATGAGCTCTAAAATCTTTCTCCAG : AAATAAAATGTAAATATTCCTTCTGGATTGATGGCAGCTATGACACCGCGCTATATTTCAACTTTTCAGTATCACATTAACAAAAGTTTGGAGGAATCAATAATCTTCAGGGAAGTTCAAGTATTATTATTGTGTACATGTTCCCCTTGCTGTAGAAATCTCGAAAAGTAAATGCCTTACCTATGTTGTGTCAGTTGGGGTTTTATCTAGCTAACCCGACAATGCAACCTCTAGGTAAAATGTATATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAACCTTTCAAGCGATCAACATCTCCAGTTTGTTTTTC : GAAAAAAAAAAACAA</gDNA_template>
            <first_frame> Q  Q  Q  I  F  L  S  S  P  P  N  L  F  Y  P  *  I  P  P  F  F  F  P  P  L  S  V  N  P  H  *  I  Y  C  L  T  M  L  G  V  E  L  R  I  S  T  V  A  G  V  F  T  D  L  P  E  T  S  R  R  S  A  S  W  N  C  N  S  S  I  G  N  I  S  Y  H  L  S  S  R  N  R  H  C  R  K  S  R  F  M  V  I  C  S  K  S  S  R  G  S  F  N  R  K  S  N  Q  S  D  E  P  G  D  D  Y  I  E  A  V  V  L  V  S   : E  T  M  K  H  Y  K  M  H  M  G  G  F  Q  E  E  T  R  W  H  S  S  A  Q  L  I  P  S  S  F  H  P  K  D  R  I  A  N  A  S  S  L  G  T  G  F  L  R  R  F  K  N  P  T  I  F  L  K  I  S  C  D  A  E  Y  V  L  P  I  I  V   : G  E  H  A  V  E  K  L  I  D  S  L  H  E  E  E  T  G  :  D  C  P  D  E  F  L  L  L  R  N  L  L  L  K  S  G  Y  E  :  V  K  M  V  K  I  T  E  R  V  T  S  T  Y  F  A  R  I  F  F  H  K  :  A  G  E  K  D  I  I  S  V  D  A  R  P  S  D  A  I  N  V  A  R  R  C  K  :  A  P  I  F  V  N  K  Q  I  V  L  T  D  A  T  R  I  G  Y  G  M  D  R  S  S  R  I  K  S  T  Y  D  V  L  L  D  S :   A  S  D  G  P  D  L  L  S  E  E  L  S  M  L  R  N  M  N  L  A  V  N  E  E  R  Y  N  D  A   : A  V  W  K  D  K  L  M  R  L  R  E  F  K  T  *  A  L  K  S  F  S  R :   N  K  M  *  I  F  L  L  D  *  W  Q  L  *  H  R  A  I  F  Q  L  F  S  I  T  L  T  K  V  W  R  N  Q  *  S  S  G  K  F  K  Y  Y  Y  C  V  H  V  P  L  A  V  E  I  S  K  S  K  C  L  T  Y  V  V  S  V  G  V  L  S  S  *  P  D  N  A  T  S  R  *  N  V  Y  S  L  I  V  A  E  E  Y  V  N  Y  V  I  V  A  C  A  H  S  R  *  T  P  S  M  P  T  I  V  A  L  N  F  Q  K  K  R  D  E  I  K  L  *  S  G  *  L  K  E  S  C  L  *  R  S  G  K  T  S  L  F  S  A  N  Q  Q  I  L  Q  R  W  H  D  L  K  A  M  W  *  Y  I  T  M  T  H  R  W  C  L  S  F  S  S  H  H  H  S  *  I  V  V  Y  K  L  R  E  G  A  G  V  T  M  L  K  L  Y  V  V  H  L  I  P  S  I  L  A  A  F  I  I  S  R  L  Q  I  I  R  R  I  G  D  L  G  I  L  *  S  N  N  Y  Q  K  G  V  L  C  Q  K  T  F  Q  A  I  N  I  S  S  L  F  F  :  E  K  K  K  Q </first_frame>
            <second_frame>  N  N  K  Y  F  C  L  L  H  L  I  Y  F  I  P  K  S  P  P  F  F  F  L  L  S  L  *  T  H  I  E  F  I  V  *  Q  C  S  A  L  S  *  G  S  P  P  S  P  E  F  S  P  I  Y  R  K  Q  V  A  G  V  P  A  G  T  V  T  P  P  L  E  I  S  H  I  I  S  L  P  E  I  G  I  V  E  S  P  D  S  W  *  S  V  A  S  H  H  A  E  A  L  I  G  N  L  I  R  V  M  N  R  V  M  I  I  L  K  L  S  F  S  F  Q  :  R  L  *  S  T  T  K  C  I  W  V  D  F  K  K  K  Q  D  G  T  H  L  L  S  *  F  P  L  L  F  I  L  R  I  V  L  L  M  H  H  L  *  G  Q  D  F  F  A  V  S  R  I  Q  L  F  F  L  R  F  P  V  M  Q  N  M  S  Y  Q  L  L  L  :  E  N  M  L  S  K  N  L  *  I  H  C  M  R  R  R  L  G :   I  A  P  T  S  S  C  F  *  G  I  Y  C  *  N  L  A  M  K :   L  K  W  *  R  L  Q  K  E  *  L  V  L  I  L  P  E  Y  F  S  T  R :   Q  G  K  K  I  L  L  V  W  M  L  V  P  P  M  P  L  M  L  P  E  D  V  R :   H  Q  Y  L  *  I  S  K  L  S  *  L  M  Q  L  E  *  V  M  E  W  T  D  L  A  E  L  S  P  P  M  M  Y  Y  *  I   : V  H  Q  M  A  P  I  Y  F  L  K  N  L  V  C  *  E  I  *  T  *  Q  *  M  R  R  G  T  M  M  Q  :  L  C  G  R  T  N  *  *  D  F  V  S  S  R  H  E  L  *  N  L  S  P   : E  I  K  C  K  Y  S  F  W  I  D  G  S  Y  D  T  A  L  Y  F  N  F  S  V  S  H  *  Q  K  F  G  G  I  N  N  L  Q  G  S  S  S  I  I  I  V  Y  M  F  P  L  L  *  K  S  R  K  V  N  A  L  P  M  L  C  Q  L  G  F  Y  L  A  N  P  T  M  Q  P  L  G  K  M  Y  I  V  *  L  L  L  K  N  M  *  T  M  *  *  *  H  V  R  I  Q  D  E  L  L  P  C  Q  Q  *  *  H  *  T  F  K  R  R  E  M  R  S  S  F  E  V  G  S  *  K  K  A  V  C  E  G  Q  E  R  R  V  C  L  V  Q  I  N  K  Y  C  K  D  G  T  T  *  K  P  C  G  D  I  L  P  *  H  T  D  G  V  F  P  F  P  L  I  T  T  H  R  *  L  Y  I  S  *  E  K  G  L  E  *  L  C  S  S  Y  M  L  Y  I  *  F  H  P  Y  W  Q  H  L  L  Y  P  D  S  R  L  L  E  E  L  E  I  *  E  Y  C  K  V  I  I  T  R  R  G  F  F  V  K  K  P  F  K  R  S  T  S  P  V  C  F  S :   K  K  K  N   </second_frame>
            <third_frame>   T  T  N  I  F  V  F  S  T  *  F  I  L  S  L  N  P  P  L  F  F  S  S  S  L  C  K  P  T  L  N  L  L  S  N  N  A  R  R  *  V  K  D  L  H  R  R  R  S  F  H  R  S  T  G  N  K  S  P  E  C  Q  L  E  L  *  L  L  H  W  K  Y  L  I  S  S  L  F  Q  K  *  A  L  *  K  V  Q  I  H  G  N  L  *  Q  V  I  T  R  K  L  *  S  E  I  *  S  E  *  *  T  G  *  *  L  Y  *  S  C  R  S  R  F  R :   D  Y  E  A  L  Q  N  A  Y  G  W  I  S  R  R  N  K  M  A  L  I  C  S  A  D  S  L  F  F  S  S  *  G  S  Y  C  *  C  I  I  F  R  D  R  I  S  S  P  F  Q  E  S  N  Y  F  S  *  D  F  L  *  C  R  I  C  L  T  N  Y  C  W :   R  T  C  C  R  K  T  Y  R  F  I  A  *  G  G  D  W   : G  L  P  R  R  V  P  A  F  E  E  S  I  V  E  I  W  L  *   : S  *  N  G  E  D  Y  R  K  S  D  *  Y  L  F  C  Q  N  I  F  P  Q   : G  R  G  K  R  Y  Y  *  C  G  C  S  S  L  R  C  H  *  C  C  Q  K  M  *   : G  T  N  I  C  E  *  A  N  C  L  D  *  C  N  *  N  R  L  W  N  G  P  I  *  Q  N  *  V  H  L  *  C  I  T  R  *  :  C  I  R  W  P  R  F  T  F  *  R  T  *  Y  V  E  K  Y  E  L  S  S  E  *  G  E  V  Q  *  C  S :   C  V  E  G  Q  T  D  E  T  S  *  V  Q  D  M  S  S  K  I  F  L  Q  :  K  *  N  V  N  I  P  S  G  L  M  A  A  M  T  P  R  Y  I  S  T  F  Q  Y  H  I  N  K  S  L  E  E  S  I  I  F  R  E  V  Q  V  L  L  L  C  T  C  S  P  C  C  R  N  L  E  K  *  M  P  Y  L  C  C  V  S  W  G  F  I  *  L  T  R  Q  C  N  L  *  V  K  C  I  *  F  D  C  C  *  R  I  C  E  L  C  D  S  S  M  C  A  F  K  M  N  S  F  H  A  N  N  S  S  T  K  L  S  K  E  E  R  *  D  Q  A  L  K  W  V  A  E  R  K  L  S  V  K  V  R  K  D  E  F  V  *  C  K  S  T  N  I  A  K  M  A  R  L  K  S  H  V  V  I  Y  Y  H  D  T  Q  M  V  S  F  L  F  L  S  S  P  L  I  D  S  C  I  *  V  K  R  R  G  W  S  D  Y  A  Q  V  I  C  C  T  F  D  S  I  H  I  G  S  I  Y  Y  I  Q  T  P  D  Y  *  K  N  W  R  F  R  N  I  V  K  *  *  L  P  E  G  G  S  L  S  K  N  L  S  S  D  Q  H  L  Q  F  V  F   : R  K  K  K  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12588" stop="12864"/>
                    <exon start="13985" stop="14197"/>
                    <exon start="14293" stop="14345"/>
                    <exon start="14444" stop="14500"/>
                    <exon start="15016" stop="15081"/>
                    <exon start="15175" stop="15246"/>
                    <exon start="15650" stop="15759"/>
                    <exon start="15834" stop="15925"/>
                    <exon start="16028" stop="16074"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>984</number_coding_nucleotides>
                  <number_encoded_amino_acids>328</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYCLTMLGVELRISTVAGVFTDLPETSRRSASWNCNSSIGNISYHLSSRNRHCRKSRFMVICSKSSRGSFNRKSNQSDEPGDDYIEAVVLVSETMKHYKMHMGGFQEETRWHSSAQLIPSSFHPKDRIANASSLGTGFLRRFKNPTIFLKISCDAEYVLPIIVGEHAVEKLIDSLHEEETGDCPDEFLLLRNLLLKSGYEVKMVKITERVTSTYFARIFFHKAGEKDIISVDARPSDAINVARRCKAPIFVNKQIVLTDATRIGYGMDRSSRIKSTYDVLLDSASDGPDLLSEELSMLRNMNLAVNEERYNDAAVWKDKLMRLREFKT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="16545" e_stop="17005"/>
            <exon e_start="19694" e_stop="19708"/>
            <exon e_start="20102" e_stop="20123"/>
            <exon e_start="21905" e_stop="21952"/>
            <exon e_start="22092" e_stop="22111"/>
            <exon e_start="22628" e_stop="22683"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.558" e_score="1.000"/>
          <exon-intron don_prob="0.740" acc_prob="0.000" e_score="0.600"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.864"/>
          <exon-intron don_prob="0.963" acc_prob="0.966" e_score="0.771"/>
          <exon-intron don_prob="0.899" acc_prob="0.678" e_score="0.150"/>
          <exon-only e_score="0.446"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16545" e_stop="17005" e_length="461"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.558">
            <gDNA_intron_boundary i_start="17006" i_stop="19693" i_length="2688"/>
          </intron>
          <exon e_serial="2" e_score="0.600">
            <gDNA_exon_boundary e_start="19694" e_stop="19708" e_length="15"/>
          </exon>
          <intron i_serial="2" don_prob="0.740" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19709" i_stop="20101" i_length="393"/>
          </intron>
          <exon e_serial="3" e_score="0.864">
            <gDNA_exon_boundary e_start="20102" e_stop="20123" e_length="22"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="20124" i_stop="21904" i_length="1781"/>
          </intron>
          <exon e_serial="4" e_score="0.771">
            <gDNA_exon_boundary e_start="21905" e_stop="21952" e_length="48"/>
          </exon>
          <intron i_serial="4" don_prob="0.963" acc_prob="0.966">
            <gDNA_intron_boundary i_start="21953" i_stop="22091" i_length="139"/>
          </intron>
          <exon e_serial="5" e_score="0.150">
            <gDNA_exon_boundary e_start="22092" e_stop="22111" e_length="20"/>
          </exon>
          <intron i_serial="5" don_prob="0.899" acc_prob="0.678">
            <gDNA_intron_boundary i_start="22112" i_stop="22627" i_length="516"/>
          </intron>
          <exon e_serial="6" e_score="0.446">
            <gDNA_exon_boundary e_start="22628" e_stop="22683" e_length="56"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16545" stop="17005"/>
              <exon start="19694" stop="19708"/>
              <exon start="20102" stop="20123"/>
              <exon start="21905" stop="21952"/>
              <exon start="22092" stop="22111"/>
              <exon start="22628" stop="22683"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552212" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATTAGAAGAATTGGAGATTTAGGAATATTGTAAAGTAATAATTACCAGAAGGGGGTTCTTTGTCAAAAAA : GATGAGGAAAAACAA : AAAAAAAAAAGAAGAAAAAACA : AAAAAAAAAAATAAAGCAAAAAATAAAAATAAAATAAAAAAAATTAGT : CGATTTCGCTTTTTCAGAAG : AGAGTGCTCCAATGGCAGTGGGACACAATTGAGATAATTTCGACGATTAGAAAAAA</gDNA_template>
            <first_frame> *  R  I  C  E  L  C  D  S  S  M  C  A  F  K  M  N  S  F  H  A  N  N  S  S  T  K  L  S  K  E  E  R  *  D  Q  A  L  K  W  V  A  E  R  K  L  S  V  K  V  R  K  D  E  F  V  *  C  K  S  T  N  I  A  K  M  A  R  L  K  S  H  V  V  I  Y  Y  H  D  T  Q  M  V  S  F  L  F  L  S  S  P  L  I  D  S  C  I  *  V  K  R  R  G  W  S  D  Y  A  Q  V  I  C  C  T  F  D  S  I  H  I  G  S  I  Y  Y  I  Q  T  P  D  Y  *  K  N  W  R  F  R  N  I  V  K  *  *  L  P  E  G  G  S  L  S  K  K :   M  R  K  N  K :   K  K  K  E  E  K  T  :  K  K  K  N  K  A  K  N  K  N  K  I  K  K  I  S  :  R  F  R  F  F  R  R :   E  C  S  N  G  S  G  T  Q  L  R  *  F  R  R  L  E  K  </first_frame>
            <second_frame>  E  E  Y  V  N  Y  V  I  V  A  C  A  H  S  R  *  T  P  S  M  P  T  I  V  A  L  N  F  Q  K  K  R  D  E  I  K  L  *  S  G  *  L  K  E  S  C  L  *  R  S  G  K  T  S  L  F  S  A  N  Q  Q  I  L  Q  R  W  H  D  L  K  A  M  W  *  Y  I  T  M  T  H  R  W  C  L  S  F  S  S  H  H  H  S  *  I  V  V  Y  K  L  R  E  G  A  G  V  T  M  L  K  L  Y  V  V  H  L  I  P  S  I  L  A  A  F  I  I  S  R  L  Q  I  I  R  R  I  G  D  L  G  I  L  *  S  N  N  Y  Q  K  G  V  L  C  Q  K   : R  *  G  K  T   : K  K  K  K  K  K  K  Q :   K  K  K  I  K  Q  K  I  K  I  K  *  K  K  L  V :   D  F  A  F  S  E   : E  S  A  P  M  A  V  G  H  N  *  D  N  F  D  D  *  K  K </second_frame>
            <third_frame>   K  N  M  *  T  M  *  *  *  H  V  R  I  Q  D  E  L  L  P  C  Q  Q  *  *  H  *  T  F  K  R  R  E  M  R  S  S  F  E  V  G  S  *  K  K  A  V  C  E  G  Q  E  R  R  V  C  L  V  Q  I  N  K  Y  C  K  D  G  T  T  *  K  P  C  G  D  I  L  P  *  H  T  D  G  V  F  P  F  P  L  I  T  T  H  R  *  L  Y  I  S  *  E  K  G  L  E  *  L  C  S  S  Y  M  L  Y  I  *  F  H  P  Y  W  Q  H  L  L  Y  P  D  S  R  L  L  E  E  L  E  I  *  E  Y  C  K  V  I  I  T  R  R  G  F  F  V  K  K  :  D  E  E  K  Q  :  K  K  K  R  R  K  N   : K  K  K  K  *  S  K  K  *  K  *  N  K  K  N  *   : S  I  S  L  F  Q  K  :  R  V  L  Q  W  Q  W  D  T  I  E  I  I  S  T  I  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16502" e_stop="16938"/>
            <exon e_start="17280" e_stop="17323"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.953" e_score="0.975"/>
          <exon-only e_score="0.591"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="16502" e_stop="16938" e_length="437"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.953">
            <gDNA_intron_boundary i_start="16939" i_stop="17279" i_length="341"/>
          </intron>
          <exon e_serial="2" e_score="0.591">
            <gDNA_exon_boundary e_start="17280" e_stop="17323" e_length="44"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16502" stop="16938"/>
              <exon start="17280" stop="17323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539605" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAATGCAACCTCTAGGTAAAATGTATATAGTTTGATTGTTGCTGAAGAATATGTGAACTATGTGATAGTAGCATGTGCGCATTCAAGATGAACTCCTTCCATGCCAACAATAGTAGCACTAAACTTTCAAAAGAAGAGAGATGAGATCAAGCTTTGAAGTGGGTAGCTGAAAGAAAGCTGTCTGTGAAGGTCAGGAAAGACGAGTTTGTTTAGTGCAAATCAACAAATATTGCAAAGATGGCACGACTTAAAAGCCATGTGGTGATATATTACCATGACACACAGATGGTGTCTTTCCTTTTCCTCTCATCACCACTCATAGATAGTTGTATATAAGTTAAGAGAAGGGGCTGGAGTGACTATGCTCAAGTTATATGTTGTACATTTGATTCCATCCATATTGGCAGCATTTATTATATCCAGACTCCAGATTATT : TTATATATAGCTGTAGTAAGGAAAAAAAAAAACAATTTATCAGA</gDNA_template>
            <first_frame> T  M  Q  P  L  G  K  M  Y  I  V  *  L  L  L  K  N  M  *  T  M  *  *  *  H  V  R  I  Q  D  E  L  L  P  C  Q  Q  *  *  H  *  T  F  K  R  R  E  M  R  S  S  F  E  V  G  S  *  K  K  A  V  C  E  G  Q  E  R  R  V  C  L  V  Q  I  N  K  Y  C  K  D  G  T  T  *  K  P  C  G  D  I  L  P  *  H  T  D  G  V  F  P  F  P  L  I  T  T  H  R  *  L  Y  I  S  *  E  K  G  L  E  *  L  C  S  S  Y  M  L  Y  I  *  F  H  P  Y  W  Q  H  L  L  Y  P  D  S  R  L  F :   Y  I  *  L  *  *  G  K  K  K  T  I  Y  Q  </first_frame>
            <second_frame>  Q  C  N  L  *  V  K  C  I  *  F  D  C  C  *  R  I  C  E  L  C  D  S  S  M  C  A  F  K  M  N  S  F  H  A  N  N  S  S  T  K  L  S  K  E  E  R  *  D  Q  A  L  K  W  V  A  E  R  K  L  S  V  K  V  R  K  D  E  F  V  *  C  K  S  T  N  I  A  K  M  A  R  L  K  S  H  V  V  I  Y  Y  H  D  T  Q  M  V  S  F  L  F  L  S  S  P  L  I  D  S  C  I  *  V  K  R  R  G  W  S  D  Y  A  Q  V  I  C  C  T  F  D  S  I  H  I  G  S  I  Y  Y  I  Q  T  P  D  Y   : F  I  Y  S  C  S  K  E  K  K  K  Q  F  I  R </second_frame>
            <third_frame>   N  A  T  S  R  *  N  V  Y  S  L  I  V  A  E  E  Y  V  N  Y  V  I  V  A  C  A  H  S  R  *  T  P  S  M  P  T  I  V  A  L  N  F  Q  K  K  R  D  E  I  K  L  *  S  G  *  L  K  E  S  C  L  *  R  S  G  K  T  S  L  F  S  A  N  Q  Q  I  L  Q  R  W  H  D  L  K  A  M  W  *  Y  I  T  M  T  H  R  W  C  L  S  F  S  S  H  H  H  S  *  I  V  V  Y  K  L  R  E  G  A  G  V  T  M  L  K  L  Y  V  V  H  L  I  P  S  I  L  A  A  F  I  I  S  R  L  Q  I  I  :  L  Y  I  A  V  V  R  K  K  K  N  N  L  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="17024" PGL_stop="16515"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17024" e_stop="16515"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="17024" e_stop="16515" e_length="510"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17024" stop="16515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268524" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGTTGATCGCTTGAAAGGTTTTTTGACAAAGAACCCCCTTCTGGTAATTATTACTTTACAATATTCCTAAATCTCCAATTCTTCTAATAATCTGGAGTCTGGATATAATAAATGCTGCCAATATGGATGGAATCAAATGTACAACATATAACTTGAGCATAGTCACTCCAGCCCCTTCTCTTAACTTATATACAACTATCTATGAGTGGTGATGAGAGGAAAAGGAAAGACACCATCTGTGTGTCATGGTAATATATCACCACATGGCTTTTAAGTCGTGCCATCTTTGCAATATTTGTTGATTTGCACTAAACAAACTCGTCTTTCCTGACCTTCACAGACAGCTTTCTTTCAGCTACCCACTTCAAAGCTTGATCTCATCTCTCTTCTTTTGAAAGTTTAGTGCTACTATTGTTGGCATGGAAGGAGTTCATCTTGAATGCGCACATGCTACTATCACATAGTTCACATATTCTTCAGCAACAATCAAACTATATACATTTTACCTA</gDNA_template>
            <first_frame> M  L  I  A  *  K  V  F  *  Q  R  T  P  F  W  *  L  L  L  Y  N  I  P  K  S  P  I  L  L  I  I  W  S  L  D  I  I  N  A  A  N  M  D  G  I  K  C  T  T  Y  N  L  S  I  V  T  P  A  P  S  L  N  L  Y  T  T  I  Y  E  W  *  *  E  E  K  E  R  H  H  L  C  V  M  V  I  Y  H  H  M  A  F  K  S  C  H  L  C  N  I  C  *  F  A  L  N  K  L  V  F  P  D  L  H  R  Q  L  S  F  S  Y  P  L  Q  S  L  I  S  S  L  F  F  *  K  F  S  A  T  I  V  G  M  E  G  V  H  L  E  C  A  H  A  T  I  T  *  F  T  Y  S  S  A  T  I  K  L  Y  T  F  Y  L </first_frame>
            <second_frame>  C  *  S  L  E  R  F  F  D  K  E  P  P  S  G  N  Y  Y  F  T  I  F  L  N  L  Q  F  F  *  *  S  G  V  W  I  *  *  M  L  P  I  W  M  E  S  N  V  Q  H  I  T  *  A  *  S  L  Q  P  L  L  L  T  Y  I  Q  L  S  M  S  G  D  E  R  K  R  K  D  T  I  C  V  S  W  *  Y  I  T  T  W  L  L  S  R  A  I  F  A  I  F  V  D  L  H  *  T  N  S  S  F  L  T  F  T  D  S  F  L  S  A  T  H  F  K  A  *  S  H  L  S  S  F  E  S  L  V  L  L  L  L  A  W  K  E  F  I  L  N  A  H  M  L  L  S  H  S  S  H  I  L  Q  Q  Q  S  N  Y  I  H  F  T   </second_frame>
            <third_frame>   V  D  R  L  K  G  F  L  T  K  N  P  L  L  V  I  I  T  L  Q  Y  S  *  I  S  N  S  S  N  N  L  E  S  G  Y  N  K  C  C  Q  Y  G  W  N  Q  M  Y  N  I  *  L  E  H  S  H  S  S  P  F  S  *  L  I  Y  N  Y  L  *  V  V  M  R  G  K  G  K  T  P  S  V  C  H  G  N  I  S  P  H  G  F  *  V  V  P  S  L  Q  Y  L  L  I  C  T  K  Q  T  R  L  S  *  P  S  Q  T  A  F  F  Q  L  P  T  S  K  L  D  L  I  S  L  L  L  K  V  *  C  Y  Y  C  W  H  G  R  S  S  S  *  M  R  T  C  Y  Y  H  I  V  H  I  F  F  S  N  N  Q  T  I  Y  I  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="36366" PGL_stop="47575"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36366" e_stop="36794"/>
            <exon e_start="36949" e_stop="37063"/>
            <exon e_start="39256" e_stop="39329"/>
            <exon e_start="39473" e_stop="39592"/>
            <exon e_start="39738" e_stop="39792"/>
            <exon e_start="41219" e_stop="41329"/>
            <exon e_start="42003" e_stop="42053"/>
            <exon e_start="43308" e_stop="43468"/>
            <exon e_start="43545" e_stop="43652"/>
            <exon e_start="44160" e_stop="44233"/>
            <exon e_start="44512" e_stop="44687"/>
            <exon e_start="45370" e_stop="45465"/>
            <exon e_start="46126" e_stop="46206"/>
            <exon e_start="46291" e_stop="46344"/>
            <exon e_start="46436" e_stop="46570"/>
            <exon e_start="46653" e_stop="46980"/>
            <exon e_start="47194" e_stop="47218"/>
            <exon e_start="47338" e_stop="47346"/>
            <exon e_start="47560" e_stop="47575"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.714" e_score="1.000"/>
          <exon-intron don_prob="0.018" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="0.983" acc_prob="0.929" e_score="0.980"/>
          <exon-intron don_prob="0.235" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.209" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.737" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.783" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.839" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.345" e_score="0.720"/>
          <exon-intron don_prob="0.900" acc_prob="0.938" e_score="0.444"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36366" e_stop="36794" e_length="429"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36949" e_stop="37063" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39256" e_stop="39329" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.714">
            <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39473" e_stop="39592" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.018" acc_prob="0.979">
            <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="39738" e_stop="39792" e_length="55"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.905">
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          <exon e_serial="6" e_score="0.989">
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          <exon e_serial="8" e_score="1.000">
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        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E202558" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
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          <PGS_line>
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            <referenceDNA id="SGN-E254598" strand="+"/>
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          <PGS_line>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463563" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E473299" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E483009" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E482972" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E271197" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E458745" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E377945" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E233178" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E306642" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E307463" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E570778" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E243521" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E241968" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E266035" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E557518" strand="+"/>
          </PGS_line>
          <PGS_line>
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            <referenceDNA id="SGN-E390779" strand="+"/>
          </PGS_line>
          <PGS_line>
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            <referenceDNA id="SGN-E233583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46335" stop="46344"/>
              <exon start="46436" stop="46570"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46466" stop="46570"/>
              <exon start="46653" stop="46971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413052" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTCATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG : TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG : GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG : CATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAG : GCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAG : TTGACCAATATAATATCTGAGATTGGTCTGAACATTGAAGAGGCCCATGTTTTTTCAACTACTGATGGTTTCTCCTTGGATGTCTTTGTGGTTGATGGATGGCCGTATGAG : GAGACGGAGTTGCTTAAGAGTGAGGTGCAAAAGGAAGTTATGAGGAGCAAG : GAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCT : GTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG : GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG : AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA : GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG : GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA : ATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG : GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG : GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTACCTTTC : TTTAAAAAGAAATAACGATGAAAAC : ATAATCGAC : ATCACCAAAAAAAAAA</gDNA_template>
            <first_frame> L  L  I  L  S  P  P  S  F  P  L  K  K  I  C  P  L  S  R  I  Y  P  S  N  Q  L  *  I  H  S  F  C  S  S  *  K  I  F  S  K  L  W  K  L  L  S  Y  A  T  L  L  L  L  A  T  F  P  P  C  K  S  I  T  K  R  R  R  F  C  E  F  C  N  F  V  F  V  N  G  D  G  R  Q  R  E  L  R  E  Q  S  D  G  A  L  V  A  Q  A  K  S  A  T  E  A  E  E  *  S  V  *  P  S  A  *  *  T  T  G  F  E  S  P  R  G  *  T  P  W  L  *  R  P  A  L  A  S  L  *  S  P  P  C  S  :  L  C  I  G  C  K  C  G  K  S  R  R  C  A  H  A  Q  E  V  A  G  H  S  G  G  S  *  E  *  T  C  L  *  C  P  P  C  A   : G  S  A  Y  V  H  W  N  V  N  Q  Y  C  *  C  R  S  F  S  *  *  R  N  P  K  :  H  S  S  S  S  N  F  W  F  I  T  K  S  S  R  P  *  N  S  *  *  *  S  S  C  E  S  W  R  *  *  Y  Q  F  N  F  A  D  N  Q  :  A  N  A  R  D  Y  F  F  N  Y  *  Q  A  K  N  A  H  S   : V  D  Q  Y  N  I  *  D  W  S  E  H  *  R  G  P  C  F  F  N  Y  *  W  F  L  L  G  C  L  C  G  *  W  M  A  V  *   : G  D  G  V  A  *  E  *  G  A  K  G  S  Y  E  E  Q   : G  A  A  T  S  P  A  S  N  Q  *  T  R  S  N  I  *  I  R  L  R  *  C  K  N  T  Y  *  W  I  *  *  L  G  N  *  Y  P  P  A  E  I  *  K  *  S  S  I  W  V  I  W  R  S  :  V  *  R  Y  I  L  *  P  G  S  G  Y  K  S  S  Q  A  *  K  F  E  Y  G  Y  G  K  R  V  L  S  R  G  L  Y  H  E  :  E  N  S  A  Q  K  C  C  S  I  Y  R  G  M  H  T  T  S  Q  P  V  H  R  D  R :   V  H  D  Q  R  K  H  L  Y  F  F  A  Q  A  K  R  C  F  *  A  S  Y  S  P  E  G  C  N  *  C  F  *  G  N  E  L  S  A  P  K  *  H  N  S  S  *  S  E  D  C  Q  S  S  D  G  *  T  W   : S  C  *  G  W  *  L  W  G  C  *  S  A  D  S  N  W  G  D  D  S  *  N  W  N  V  *  M  D  G  S  *   : G  D  *  T  Q  T  V  *  P  Q  G  *  C  F  Q  L  W  Y  S  A  V  G  T  S  D  W  R   : N  S  I  C  I  L  N  T  I  T  S  S  N  R  C  G  A  T   : G  S  T  A  N  N  S  *  E  H  S  S  K  A  C  *  T  S  *  K  M  L  A  A  R  P  N  T  E  T  R  F  L  G  D  F  G  Y  S  E  A  T  N  K  G   : G  W  R  *  W  R  G  Q  T  Q  G  Q  I  N  R  W  L  F  L  V  S  *  K  G  Q  S  L  R  I  Y  *  K  R  G  G  *  S  A  F  S  F  C  L  G  V  Q  I  L  *  Y  P  N  L  I  *  L  V  F  E  N  H  G  F  Y  L  M  S  L  G  I  H  L  L  F  L  I  *  S  G  V  Q  A  G  E  *  S  F  G  N  S  L  Q  N  N  C  E  F  A  Q  V  L  I  P  N  P  F  L  Y  L  S :   L  K  R  N  N  D  E  N  :  I  I  D  :  I  T  K  K  K  </first_frame>
            <second_frame>  F  S  F  S  L  L  H  L  F  P  *  K  K  F  V  P  F  L  V  F  T  H  Q  I  N  S  K  S  I  P  S  V  H  H  E  K  F  S  L  N  Y  G  N  Y  F  L  M  L  L  Y  C  Y  L  Q  L  F  P  P  V  N  P  L  Q  R  G  G  D  F  V  N  S  V  I  L  Y  L  *  M  A  M  D  D  N  E  S  C  G  S  R  A  M  E  P  L  S  P  K  Q  N  R  L  Q  R  Q  K  N  E  V  F  N  Q  V  L  S  R  L  Q  D  L  N  L  Q  E  V  K  L  P  G  F  E  D  Q  L  W  L  H  F  N  R  L  P  V  R :   Y  A  S  D  V  N  V  E  R  A  E  D  V  L  M  H  K  R  L  L  D  I  A  E  D  P  E  N  R  P  A  F  D  V  R  L  V  Q  :  V  Q  P  M  Y  T  G  T  S  T  N  T  V  D  V  D  P  S  V  N  E  E  I  P  S :   I  H  P  P  P  T  F  G  S  S  P  N  L  Q  G  L  E  I  H  D  D  K  A  H  V  N  H  G  D  S  D  I  N  S  T  S  R  T  T  R :   P  M  H  E  I  T  F  S  T  I  D  K  P  K  T  L  T  Q  :  L  T  N  I  I  S  E  I  G  L  N  I  E  E  A  H  V  F  S  T  T  D  G  F  S  L  D  V  F  V  V  D  G  W  P  Y  E  :  E  T  E  L  L  K  S  E  V  Q  K  E  V  M  R  S  K  :  E  Q  P  Q  V  L  P  P  I  S  E  P  G  Q  T  S  E  S  G  S  D  S  V  K  I  P  T  D  G  S  D  D  W  E  I  D  I  R  L  L  K  F  E  N  K  V  A  S  G  S  F  G  D  L :   Y  K  G  T  Y  C  S  Q  E  V  A  I  K  V  L  K  P  E  N  L  N  M  D  M  V  K  E  F  S  Q  E  V  F  I  M  R :   K  I  R  H  K  N  V  V  Q  F  I  G  A  C  T  R  P  P  N  L  C  I  V  T   : E  F  M  T  R  G  S  I  Y  T  F  L  H  K  Q  R  G  A  F  K  L  P  T  L  L  K  V  A  I  D  V  S  K  G  M  S  Y  L  H  Q  N  N  I  I  H  R  D  L  K  T  A  N  L  L  M  D  E  H  G  :  V  V  K  V  G  D  F  G  V  A  R  V  Q  T  Q  T  G  V  M  T  A  E  T  G  T  Y  R  W  M  A  P  E  :  V  I  E  H  K  P  Y  D  H  K  A  D  V  F  S  F  G  I  V  L  W  E  L  L  T  G  E  :  I  P  Y  A  Y  L  T  P  L  Q  A  A  I  G  V  V  Q  Q  :  G  L  R  P  T  I  P  K  S  T  H  P  K  L  A  E  L  L  E  K  C  W  Q  Q  D  P  T  Q  R  P  D  F  S  E  I  L  D  I  L  K  Q  L  T  K  E  :  V  G  D  D  G  E  D  R  H  K  D  K  S  I  G  G  F  F  S  S  L  R  K  G  N  H  *  E  F  T  K  R  E  E  V  D  R  P  S  A  F  V  S  V  Y  R  F  S  D  I  Q  T  *  S  D  *  F  L  K  I  M  V  F  I  *  C  R  L  A  F  I  Y  Y  S  *  F  S  Q  G  C  K  L  V  S  K  A  L  A  T  L  Y  R  I  T  V  N  L  R  K  F  *  F  L  T  L  F  C  T  F   : L  *  K  E  I  T  M  K  T :   *  S  T :   S  P  K  K  K </second_frame>
            <third_frame>   S  H  S  L  S  S  I  F  S  P  K  K  N  L  S  P  F  S  Y  L  P  I  K  S  T  L  N  P  F  L  L  F  I  M  K  N  F  L  *  I  M  E  T  T  F  L  C  Y  S  T  V  T  C  N  F  S  P  L  *  I  H  Y  K  E  E  E  I  L  *  I  L  *  F  C  I  C  E  W  R  W  T  T  T  R  V  A  G  A  E  R  W  S  P  C  R  P  S  K  I  G  Y  R  G  R  R  M  K  C  L  T  K  C  L  V  D  Y  R  I  *  I  S  K  R  L  N  S  L  A  L  K  T  S  F  G  F  T  L  I  A  S  L  F   : V  M  H  R  M  *  M  W  K  E  Q  K  M  C  S  C  T  R  G  C  W  T  *  R  R  I  L  R  I  D  L  P  L  M  S  A  L  C  R :   F  S  L  C  T  L  E  R  Q  P  I  L  L  M  *  I  L  Q  L  M  K  K  S  Q   : A  F  I  L  L  Q  L  L  V  H  H  Q  I  F  K  A  L  K  F  M  M  I  K  L  M  *  I  M  E  I  V  I  S  I  Q  L  R  G  Q  P   : G  Q  C  T  R  L  L  F  Q  L  L  T  S  Q  K  R  S  L  S :   *  P  I  *  Y  L  R  L  V  *  T  L  K  R  P  M  F  F  Q  L  L  M  V  S  P  W  M  S  L  W  L  M  D  G  R  M  R :   R  R  S  C  L  R  V  R  C  K  R  K  L  *  G  A  R :   S  S  H  K  S  C  L  Q  S  V  N  Q  V  K  H  L  N  Q  A  P  I  V  *  K  Y  L  L  M  D  L  M  T  G  K  L  I  S  A  C  *  N  L  K  I  K  *  H  L  G  H  L  E  I   : C  I  K  V  H  T  V  A  R  K  W  L  *  K  F  S  S  L  K  I  *  I  W  I  W  *  K  S  S  L  K  R  S  L  S  *   : G  K  F  G  T  K  M  L  F  N  L  *  G  H  A  H  D  L  P  T  C  A  S  *  Q  :  S  S  *  P  E  E  A  S  I  L  F  C  T  S  K  E  V  L  L  S  F  L  L  S  *  R  L  Q  L  M  F  L  R  E  *  V  I  C  T  K  I  T  *  F  I  V  I  *  R  L  P  I  F  *  W  M  N  M  E :   L  L  R  L  V  T  L  G  L  L  E  C  R  L  K  L  G  *  *  Q  L  K  L  E  R  I  D  G  W  L  L  R :   *  L  N  T  N  R  M  T  T  R  L  M  F  S  A  L  V  *  C  C  G  N  F  *  L  E  K :   F  H  M  H  T  *  H  H  Y  K  Q  Q  *  V  W  C  N  R :   V  Y  G  Q  Q  F  L  R  A  L  I  Q  S  L  L  N  F  L  K  N  A  G  S  K  T  Q  H  R  D  Q  I  S  R  R  F  W  I  F  *  S  N  *  Q  R  R :   L  E  M  M  E  R  T  D  T  R  T  N  Q  S  V  A  F  S  R  L  L  E  R  A  I  T  E  N  L  L  K  E  R  R  L  I  G  L  Q  L  L  S  R  C  T  D  S  L  I  S  K  L  D  L  I  S  F  *  K  S  W  F  L  S  N  V  A  W  H  S  F  T  I  P  N  L  V  R  G  A  S  W  *  V  K  L  W  Q  L  S  T  E  *  L  *  I  C  A  S  S  N  S  *  P  F  F  V  P  F  :  F  K  K  K  *  R  *  K   : H  N  R   : H  H  Q  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36598" stop="36794"/>
                    <exon start="36949" stop="37063"/>
                    <exon start="39256" stop="39329"/>
                    <exon start="39473" stop="39592"/>
                    <exon start="39738" stop="39792"/>
                    <exon start="41219" stop="41329"/>
                    <exon start="42003" stop="42053"/>
                    <exon start="43308" stop="43468"/>
                    <exon start="43545" stop="43652"/>
                    <exon start="44160" stop="44233"/>
                    <exon start="44512" stop="44687"/>
                    <exon start="45370" stop="45465"/>
                    <exon start="46126" stop="46206"/>
                    <exon start="46291" stop="46344"/>
                    <exon start="46436" stop="46570"/>
                    <exon start="46653" stop="46733"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1686</number_coding_nucleotides>
                  <number_encoded_amino_acids>562</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAMDDNESCGSRAMEPLSPKQNRLQRQKNEVFNQVLSRLQDLNLQEVKLPGFEDQLWLHFNRLPVRYASDVNVERAEDVLMHKRLLDIAEDPENRPAFDVRLVQVQPMYTGTSTNTVDVDPSVNEEIPSIHPPPTFGSSPNLQGLEIHDDKAHVNHGDSDINSTSRTTRPMHEITFSTIDKPKTLTQLTNIISEIGLNIEEAHVFSTTDGFSLDVFVVDGWPYEETELLKSEVQKEVMRSKEQPQVLPPISEPGQTSESGSDSVKIPTDGSDDWEIDIRLLKFENKVASGSFGDLYKGTYCSQEVAIKVLKPENLNMDMVKEFSQEVFIMRKIRHKNVVQFIGACTRPPNLCIVTEFMTRGSIYTFLHKQRGAFKLPTLLKVAIDVSKGMSYLHQNNIIHRDLKTANLLMDEHGVVKVGDFGVARVQTQTGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGEIPYAYLTPLQAAIGVVQQGLRPTIPKSTHPKLAELLEKCWQQDPTQRPDFSEILDILKQLTKEVGDDGEDRHKDKSIGGFFSSLRKGNH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36400" stop="36597"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKFVPFLVFTHQINSKSIPSVHHEKFSLNYGNYFLMLLYCYLQLFPPVNPLQRGGDFVNSVILYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="36366" e_stop="36794"/>
            <exon e_start="36949" e_stop="37063"/>
            <exon e_start="39256" e_stop="39329"/>
            <exon e_start="39473" e_stop="39592"/>
            <exon e_start="39738" e_stop="39792"/>
            <exon e_start="41219" e_stop="41329"/>
            <exon e_start="42003" e_stop="42053"/>
            <exon e_start="43308" e_stop="43468"/>
            <exon e_start="43545" e_stop="43652"/>
            <exon e_start="44160" e_stop="44233"/>
            <exon e_start="44512" e_stop="44687"/>
            <exon e_start="45370" e_stop="45465"/>
            <exon e_start="46126" e_stop="46206"/>
            <exon e_start="46291" e_stop="46344"/>
            <exon e_start="46436" e_stop="46570"/>
            <exon e_start="46653" e_stop="46971"/>
            <exon e_start="47194" e_stop="47219"/>
            <exon e_start="47560" e_stop="47575"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.714" e_score="1.000"/>
          <exon-intron don_prob="0.018" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="0.983" acc_prob="0.929" e_score="0.980"/>
          <exon-intron don_prob="0.235" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.209" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.737" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.783" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.839" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.938" e_score="0.654"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36366" e_stop="36794" e_length="429"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36949" e_stop="37063" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39256" e_stop="39329" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.714">
            <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
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        </exon-intron_info>
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          <PGS_line>
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            <referenceDNA id="SGN-E469801" strand="+"/>
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            <referenceDNA id="SGN-E202558" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E205089" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E254598" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E463563" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E413051" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E271197" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E233178" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E306642" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E307463" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E570778" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E243521" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E241968" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E266035" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E557518" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E377833" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E233583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46335" stop="46344"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236515" strand="+"/>
          </PGS_line>
          <PGS_line>
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              <exon start="46466" stop="46570"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413052" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTCATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG : TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG : GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG : CATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAG : GCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAG : TTGACCAATATAATATCTGAGATTGGTCTGAACATTGAAGAGGCCCATGTTTTTTCAACTACTGATGGTTTCTCCTTGGATGTCTTTGTGGTTGATGGATGGCCGTATGAG : GAGACGGAGTTGCTTAAGAGTGAGGTGCAAAAGGAAGTTATGAGGAGCAAG : GAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCT : GTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG : GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG : AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA : GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG : GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA : ATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG : GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG : GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTT : TTTAAAAAGAAATAACGATGAAAACA : ATCACCAAAAAAAAAA</gDNA_template>
            <first_frame> L  L  I  L  S  P  P  S  F  P  L  K  K  I  C  P  L  S  R  I  Y  P  S  N  Q  L  *  I  H  S  F  C  S  S  *  K  I  F  S  K  L  W  K  L  L  S  Y  A  T  L  L  L  L  A  T  F  P  P  C  K  S  I  T  K  R  R  R  F  C  E  F  C  N  F  V  F  V  N  G  D  G  R  Q  R  E  L  R  E  Q  S  D  G  A  L  V  A  Q  A  K  S  A  T  E  A  E  E  *  S  V  *  P  S  A  *  *  T  T  G  F  E  S  P  R  G  *  T  P  W  L  *  R  P  A  L  A  S  L  *  S  P  P  C  S  :  L  C  I  G  C  K  C  G  K  S  R  R  C  A  H  A  Q  E  V  A  G  H  S  G  G  S  *  E  *  T  C  L  *  C  P  P  C  A   : G  S  A  Y  V  H  W  N  V  N  Q  Y  C  *  C  R  S  F  S  *  *  R  N  P  K  :  H  S  S  S  S  N  F  W  F  I  T  K  S  S  R  P  *  N  S  *  *  *  S  S  C  E  S  W  R  *  *  Y  Q  F  N  F  A  D  N  Q  :  A  N  A  R  D  Y  F  F  N  Y  *  Q  A  K  N  A  H  S   : V  D  Q  Y  N  I  *  D  W  S  E  H  *  R  G  P  C  F  F  N  Y  *  W  F  L  L  G  C  L  C  G  *  W  M  A  V  *   : G  D  G  V  A  *  E  *  G  A  K  G  S  Y  E  E  Q   : G  A  A  T  S  P  A  S  N  Q  *  T  R  S  N  I  *  I  R  L  R  *  C  K  N  T  Y  *  W  I  *  *  L  G  N  *  Y  P  P  A  E  I  *  K  *  S  S  I  W  V  I  W  R  S  :  V  *  R  Y  I  L  *  P  G  S  G  Y  K  S  S  Q  A  *  K  F  E  Y  G  Y  G  K  R  V  L  S  R  G  L  Y  H  E  :  E  N  S  A  Q  K  C  C  S  I  Y  R  G  M  H  T  T  S  Q  P  V  H  R  D  R :   V  H  D  Q  R  K  H  L  Y  F  F  A  Q  A  K  R  C  F  *  A  S  Y  S  P  E  G  C  N  *  C  F  *  G  N  E  L  S  A  P  K  *  H  N  S  S  *  S  E  D  C  Q  S  S  D  G  *  T  W   : S  C  *  G  W  *  L  W  G  C  *  S  A  D  S  N  W  G  D  D  S  *  N  W  N  V  *  M  D  G  S  *   : G  D  *  T  Q  T  V  *  P  Q  G  *  C  F  Q  L  W  Y  S  A  V  G  T  S  D  W  R   : N  S  I  C  I  L  N  T  I  T  S  S  N  R  C  G  A  T   : G  S  T  A  N  N  S  *  E  H  S  S  K  A  C  *  T  S  *  K  M  L  A  A  R  P  N  T  E  T  R  F  L  G  D  F  G  Y  S  E  A  T  N  K  G   : G  W  R  *  W  R  G  Q  T  Q  G  Q  I  N  R  W  L  F  L  V  S  *  K  G  Q  S  L  R  I  Y  *  K  R  G  G  *  S  A  F  S  F  C  L  G  V  Q  I  L  *  Y  P  N  L  I  *  L  V  F  E  N  H  G  F  Y  L  M  S  L  G  I  H  L  L  F  L  I  *  S  G  V  Q  A  G  E  *  S  F  G  N  S  L  Q  N  N  C  E  F  A  Q  V  L  I  P  N  P  F  F :   L  K  R  N  N  D  E  N   : N  H  Q  K  K   </first_frame>
            <second_frame>  F  S  F  S  L  L  H  L  F  P  *  K  K  F  V  P  F  L  V  F  T  H  Q  I  N  S  K  S  I  P  S  V  H  H  E  K  F  S  L  N  Y  G  N  Y  F  L  M  L  L  Y  C  Y  L  Q  L  F  P  P  V  N  P  L  Q  R  G  G  D  F  V  N  S  V  I  L  Y  L  *  M  A  M  D  D  N  E  S  C  G  S  R  A  M  E  P  L  S  P  K  Q  N  R  L  Q  R  Q  K  N  E  V  F  N  Q  V  L  S  R  L  Q  D  L  N  L  Q  E  V  K  L  P  G  F  E  D  Q  L  W  L  H  F  N  R  L  P  V  R :   Y  A  S  D  V  N  V  E  R  A  E  D  V  L  M  H  K  R  L  L  D  I  A  E  D  P  E  N  R  P  A  F  D  V  R  L  V  Q  :  V  Q  P  M  Y  T  G  T  S  T  N  T  V  D  V  D  P  S  V  N  E  E  I  P  S :   I  H  P  P  P  T  F  G  S  S  P  N  L  Q  G  L  E  I  H  D  D  K  A  H  V  N  H  G  D  S  D  I  N  S  T  S  R  T  T  R :   P  M  H  E  I  T  F  S  T  I  D  K  P  K  T  L  T  Q  :  L  T  N  I  I  S  E  I  G  L  N  I  E  E  A  H  V  F  S  T  T  D  G  F  S  L  D  V  F  V  V  D  G  W  P  Y  E  :  E  T  E  L  L  K  S  E  V  Q  K  E  V  M  R  S  K  :  E  Q  P  Q  V  L  P  P  I  S  E  P  G  Q  T  S  E  S  G  S  D  S  V  K  I  P  T  D  G  S  D  D  W  E  I  D  I  R  L  L  K  F  E  N  K  V  A  S  G  S  F  G  D  L :   Y  K  G  T  Y  C  S  Q  E  V  A  I  K  V  L  K  P  E  N  L  N  M  D  M  V  K  E  F  S  Q  E  V  F  I  M  R :   K  I  R  H  K  N  V  V  Q  F  I  G  A  C  T  R  P  P  N  L  C  I  V  T   : E  F  M  T  R  G  S  I  Y  T  F  L  H  K  Q  R  G  A  F  K  L  P  T  L  L  K  V  A  I  D  V  S  K  G  M  S  Y  L  H  Q  N  N  I  I  H  R  D  L  K  T  A  N  L  L  M  D  E  H  G  :  V  V  K  V  G  D  F  G  V  A  R  V  Q  T  Q  T  G  V  M  T  A  E  T  G  T  Y  R  W  M  A  P  E  :  V  I  E  H  K  P  Y  D  H  K  A  D  V  F  S  F  G  I  V  L  W  E  L  L  T  G  E  :  I  P  Y  A  Y  L  T  P  L  Q  A  A  I  G  V  V  Q  Q  :  G  L  R  P  T  I  P  K  S  T  H  P  K  L  A  E  L  L  E  K  C  W  Q  Q  D  P  T  Q  R  P  D  F  S  E  I  L  D  I  L  K  Q  L  T  K  E  :  V  G  D  D  G  E  D  R  H  K  D  K  S  I  G  G  F  F  S  S  L  R  K  G  N  H  *  E  F  T  K  R  E  E  V  D  R  P  S  A  F  V  S  V  Y  R  F  S  D  I  Q  T  *  S  D  *  F  L  K  I  M  V  F  I  *  C  R  L  A  F  I  Y  Y  S  *  F  S  Q  G  C  K  L  V  S  K  A  L  A  T  L  Y  R  I  T  V  N  L  R  K  F  *  F  L  T  L  F   : F  *  K  E  I  T  M  K  T  :  I  T  K  K  K  </second_frame>
            <third_frame>   S  H  S  L  S  S  I  F  S  P  K  K  N  L  S  P  F  S  Y  L  P  I  K  S  T  L  N  P  F  L  L  F  I  M  K  N  F  L  *  I  M  E  T  T  F  L  C  Y  S  T  V  T  C  N  F  S  P  L  *  I  H  Y  K  E  E  E  I  L  *  I  L  *  F  C  I  C  E  W  R  W  T  T  T  R  V  A  G  A  E  R  W  S  P  C  R  P  S  K  I  G  Y  R  G  R  R  M  K  C  L  T  K  C  L  V  D  Y  R  I  *  I  S  K  R  L  N  S  L  A  L  K  T  S  F  G  F  T  L  I  A  S  L  F   : V  M  H  R  M  *  M  W  K  E  Q  K  M  C  S  C  T  R  G  C  W  T  *  R  R  I  L  R  I  D  L  P  L  M  S  A  L  C  R :   F  S  L  C  T  L  E  R  Q  P  I  L  L  M  *  I  L  Q  L  M  K  K  S  Q   : A  F  I  L  L  Q  L  L  V  H  H  Q  I  F  K  A  L  K  F  M  M  I  K  L  M  *  I  M  E  I  V  I  S  I  Q  L  R  G  Q  P   : G  Q  C  T  R  L  L  F  Q  L  L  T  S  Q  K  R  S  L  S :   *  P  I  *  Y  L  R  L  V  *  T  L  K  R  P  M  F  F  Q  L  L  M  V  S  P  W  M  S  L  W  L  M  D  G  R  M  R :   R  R  S  C  L  R  V  R  C  K  R  K  L  *  G  A  R :   S  S  H  K  S  C  L  Q  S  V  N  Q  V  K  H  L  N  Q  A  P  I  V  *  K  Y  L  L  M  D  L  M  T  G  K  L  I  S  A  C  *  N  L  K  I  K  *  H  L  G  H  L  E  I   : C  I  K  V  H  T  V  A  R  K  W  L  *  K  F  S  S  L  K  I  *  I  W  I  W  *  K  S  S  L  K  R  S  L  S  *   : G  K  F  G  T  K  M  L  F  N  L  *  G  H  A  H  D  L  P  T  C  A  S  *  Q  :  S  S  *  P  E  E  A  S  I  L  F  C  T  S  K  E  V  L  L  S  F  L  L  S  *  R  L  Q  L  M  F  L  R  E  *  V  I  C  T  K  I  T  *  F  I  V  I  *  R  L  P  I  F  *  W  M  N  M  E :   L  L  R  L  V  T  L  G  L  L  E  C  R  L  K  L  G  *  *  Q  L  K  L  E  R  I  D  G  W  L  L  R :   *  L  N  T  N  R  M  T  T  R  L  M  F  S  A  L  V  *  C  C  G  N  F  *  L  E  K :   F  H  M  H  T  *  H  H  Y  K  Q  Q  *  V  W  C  N  R :   V  Y  G  Q  Q  F  L  R  A  L  I  Q  S  L  L  N  F  L  K  N  A  G  S  K  T  Q  H  R  D  Q  I  S  R  R  F  W  I  F  *  S  N  *  Q  R  R :   L  E  M  M  E  R  T  D  T  R  T  N  Q  S  V  A  F  S  R  L  L  E  R  A  I  T  E  N  L  L  K  E  R  R  L  I  G  L  Q  L  L  S  R  C  T  D  S  L  I  S  K  L  D  L  I  S  F  *  K  S  W  F  L  S  N  V  A  W  H  S  F  T  I  P  N  L  V  R  G  A  S  W  *  V  K  L  W  Q  L  S  T  E  *  L  *  I  C  A  S  S  N  S  *  P  F  F  :  F  K  K  K  *  R  *  K  Q :   S  P  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36598" stop="36794"/>
                    <exon start="36949" stop="37063"/>
                    <exon start="39256" stop="39329"/>
                    <exon start="39473" stop="39592"/>
                    <exon start="39738" stop="39792"/>
                    <exon start="41219" stop="41329"/>
                    <exon start="42003" stop="42053"/>
                    <exon start="43308" stop="43468"/>
                    <exon start="43545" stop="43652"/>
                    <exon start="44160" stop="44233"/>
                    <exon start="44512" stop="44687"/>
                    <exon start="45370" stop="45465"/>
                    <exon start="46126" stop="46206"/>
                    <exon start="46291" stop="46344"/>
                    <exon start="46436" stop="46570"/>
                    <exon start="46653" stop="46733"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1686</number_coding_nucleotides>
                  <number_encoded_amino_acids>562</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAMDDNESCGSRAMEPLSPKQNRLQRQKNEVFNQVLSRLQDLNLQEVKLPGFEDQLWLHFNRLPVRYASDVNVERAEDVLMHKRLLDIAEDPENRPAFDVRLVQVQPMYTGTSTNTVDVDPSVNEEIPSIHPPPTFGSSPNLQGLEIHDDKAHVNHGDSDINSTSRTTRPMHEITFSTIDKPKTLTQLTNIISEIGLNIEEAHVFSTTDGFSLDVFVVDGWPYEETELLKSEVQKEVMRSKEQPQVLPPISEPGQTSESGSDSVKIPTDGSDDWEIDIRLLKFENKVASGSFGDLYKGTYCSQEVAIKVLKPENLNMDMVKEFSQEVFIMRKIRHKNVVQFIGACTRPPNLCIVTEFMTRGSIYTFLHKQRGAFKLPTLLKVAIDVSKGMSYLHQNNIIHRDLKTANLLMDEHGVVKVGDFGVARVQTQTGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGEIPYAYLTPLQAAIGVVQQGLRPTIPKSTHPKLAELLEKCWQQDPTQRPDFSEILDILKQLTKEVGDDGEDRHKDKSIGGFFSSLRKGNH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36400" stop="36597"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKFVPFLVFTHQINSKSIPSVHHEKFSLNYGNYFLMLLYCYLQLFPPVNPLQRGGDFVNSVILYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="36366" e_stop="36794"/>
            <exon e_start="36949" e_stop="37063"/>
            <exon e_start="39256" e_stop="39329"/>
            <exon e_start="39473" e_stop="39592"/>
            <exon e_start="39738" e_stop="39792"/>
            <exon e_start="41219" e_stop="41329"/>
            <exon e_start="42003" e_stop="42053"/>
            <exon e_start="43308" e_stop="43468"/>
            <exon e_start="43545" e_stop="43652"/>
            <exon e_start="44160" e_stop="44233"/>
            <exon e_start="44512" e_stop="44687"/>
            <exon e_start="45370" e_stop="45465"/>
            <exon e_start="46126" e_stop="46206"/>
            <exon e_start="46291" e_stop="46344"/>
            <exon e_start="46436" e_stop="46570"/>
            <exon e_start="46653" e_stop="46971"/>
            <exon e_start="47194" e_stop="47218"/>
            <exon e_start="47560" e_stop="47575"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.714" e_score="1.000"/>
          <exon-intron don_prob="0.018" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="0.983" acc_prob="0.929" e_score="0.980"/>
          <exon-intron don_prob="0.235" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.209" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.737" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.783" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.839" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.938" e_score="0.680"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36366" e_stop="36794" e_length="429"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36949" e_stop="37063" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39256" e_stop="39329" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.714">
            <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39473" e_stop="39592" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.018" acc_prob="0.979">
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        </exon-intron_info>
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          <PGS_line>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E463563" strand="+"/>
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          <PGS_line>
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          <PGS_line>
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            <referenceDNA id="SGN-E233178" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E307463" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E570778" strand="+"/>
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            <referenceDNA id="SGN-E241968" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E266035" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E557518" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E377832" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E233583" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E236515" strand="+"/>
          </PGS_line>
          <PGS_line>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413052" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTCATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG : TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG : GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG : CATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAG : GCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAG : TTGACCAATATAATATCTGAGATTGGTCTGAACATTGAAGAGGCCCATGTTTTTTCAACTACTGATGGTTTCTCCTTGGATGTCTTTGTGGTTGATGGATGGCCGTATGAG : GAGACGGAGTTGCTTAAGAGTGAGGTGCAAAAGGAAGTTATGAGGAGCAAG : GAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCT : GTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG : GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG : AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA : GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG : GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA : ATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG : GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG : GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTT : TTTAAAAAGAAATAACGATGAAAAC : ATCACCAAAAAAAAAA</gDNA_template>
            <first_frame> L  L  I  L  S  P  P  S  F  P  L  K  K  I  C  P  L  S  R  I  Y  P  S  N  Q  L  *  I  H  S  F  C  S  S  *  K  I  F  S  K  L  W  K  L  L  S  Y  A  T  L  L  L  L  A  T  F  P  P  C  K  S  I  T  K  R  R  R  F  C  E  F  C  N  F  V  F  V  N  G  D  G  R  Q  R  E  L  R  E  Q  S  D  G  A  L  V  A  Q  A  K  S  A  T  E  A  E  E  *  S  V  *  P  S  A  *  *  T  T  G  F  E  S  P  R  G  *  T  P  W  L  *  R  P  A  L  A  S  L  *  S  P  P  C  S  :  L  C  I  G  C  K  C  G  K  S  R  R  C  A  H  A  Q  E  V  A  G  H  S  G  G  S  *  E  *  T  C  L  *  C  P  P  C  A   : G  S  A  Y  V  H  W  N  V  N  Q  Y  C  *  C  R  S  F  S  *  *  R  N  P  K  :  H  S  S  S  S  N  F  W  F  I  T  K  S  S  R  P  *  N  S  *  *  *  S  S  C  E  S  W  R  *  *  Y  Q  F  N  F  A  D  N  Q  :  A  N  A  R  D  Y  F  F  N  Y  *  Q  A  K  N  A  H  S   : V  D  Q  Y  N  I  *  D  W  S  E  H  *  R  G  P  C  F  F  N  Y  *  W  F  L  L  G  C  L  C  G  *  W  M  A  V  *   : G  D  G  V  A  *  E  *  G  A  K  G  S  Y  E  E  Q   : G  A  A  T  S  P  A  S  N  Q  *  T  R  S  N  I  *  I  R  L  R  *  C  K  N  T  Y  *  W  I  *  *  L  G  N  *  Y  P  P  A  E  I  *  K  *  S  S  I  W  V  I  W  R  S  :  V  *  R  Y  I  L  *  P  G  S  G  Y  K  S  S  Q  A  *  K  F  E  Y  G  Y  G  K  R  V  L  S  R  G  L  Y  H  E  :  E  N  S  A  Q  K  C  C  S  I  Y  R  G  M  H  T  T  S  Q  P  V  H  R  D  R :   V  H  D  Q  R  K  H  L  Y  F  F  A  Q  A  K  R  C  F  *  A  S  Y  S  P  E  G  C  N  *  C  F  *  G  N  E  L  S  A  P  K  *  H  N  S  S  *  S  E  D  C  Q  S  S  D  G  *  T  W   : S  C  *  G  W  *  L  W  G  C  *  S  A  D  S  N  W  G  D  D  S  *  N  W  N  V  *  M  D  G  S  *   : G  D  *  T  Q  T  V  *  P  Q  G  *  C  F  Q  L  W  Y  S  A  V  G  T  S  D  W  R   : N  S  I  C  I  L  N  T  I  T  S  S  N  R  C  G  A  T   : G  S  T  A  N  N  S  *  E  H  S  S  K  A  C  *  T  S  *  K  M  L  A  A  R  P  N  T  E  T  R  F  L  G  D  F  G  Y  S  E  A  T  N  K  G   : G  W  R  *  W  R  G  Q  T  Q  G  Q  I  N  R  W  L  F  L  V  S  *  K  G  Q  S  L  R  I  Y  *  K  R  G  G  *  S  A  F  S  F  C  L  G  V  Q  I  L  *  Y  P  N  L  I  *  L  V  F  E  N  H  G  F  Y  L  M  S  L  G  I  H  L  L  F  L  I  *  S  G  V  Q  A  G  E  *  S  F  G  N  S  L  Q  N  N  C  E  F  A  Q  V  L  I  P  N  P  F  F :   L  K  R  N  N  D  E  N  :  I  T  K  K  K  </first_frame>
            <second_frame>  F  S  F  S  L  L  H  L  F  P  *  K  K  F  V  P  F  L  V  F  T  H  Q  I  N  S  K  S  I  P  S  V  H  H  E  K  F  S  L  N  Y  G  N  Y  F  L  M  L  L  Y  C  Y  L  Q  L  F  P  P  V  N  P  L  Q  R  G  G  D  F  V  N  S  V  I  L  Y  L  *  M  A  M  D  D  N  E  S  C  G  S  R  A  M  E  P  L  S  P  K  Q  N  R  L  Q  R  Q  K  N  E  V  F  N  Q  V  L  S  R  L  Q  D  L  N  L  Q  E  V  K  L  P  G  F  E  D  Q  L  W  L  H  F  N  R  L  P  V  R :   Y  A  S  D  V  N  V  E  R  A  E  D  V  L  M  H  K  R  L  L  D  I  A  E  D  P  E  N  R  P  A  F  D  V  R  L  V  Q  :  V  Q  P  M  Y  T  G  T  S  T  N  T  V  D  V  D  P  S  V  N  E  E  I  P  S :   I  H  P  P  P  T  F  G  S  S  P  N  L  Q  G  L  E  I  H  D  D  K  A  H  V  N  H  G  D  S  D  I  N  S  T  S  R  T  T  R :   P  M  H  E  I  T  F  S  T  I  D  K  P  K  T  L  T  Q  :  L  T  N  I  I  S  E  I  G  L  N  I  E  E  A  H  V  F  S  T  T  D  G  F  S  L  D  V  F  V  V  D  G  W  P  Y  E  :  E  T  E  L  L  K  S  E  V  Q  K  E  V  M  R  S  K  :  E  Q  P  Q  V  L  P  P  I  S  E  P  G  Q  T  S  E  S  G  S  D  S  V  K  I  P  T  D  G  S  D  D  W  E  I  D  I  R  L  L  K  F  E  N  K  V  A  S  G  S  F  G  D  L :   Y  K  G  T  Y  C  S  Q  E  V  A  I  K  V  L  K  P  E  N  L  N  M  D  M  V  K  E  F  S  Q  E  V  F  I  M  R :   K  I  R  H  K  N  V  V  Q  F  I  G  A  C  T  R  P  P  N  L  C  I  V  T   : E  F  M  T  R  G  S  I  Y  T  F  L  H  K  Q  R  G  A  F  K  L  P  T  L  L  K  V  A  I  D  V  S  K  G  M  S  Y  L  H  Q  N  N  I  I  H  R  D  L  K  T  A  N  L  L  M  D  E  H  G  :  V  V  K  V  G  D  F  G  V  A  R  V  Q  T  Q  T  G  V  M  T  A  E  T  G  T  Y  R  W  M  A  P  E  :  V  I  E  H  K  P  Y  D  H  K  A  D  V  F  S  F  G  I  V  L  W  E  L  L  T  G  E  :  I  P  Y  A  Y  L  T  P  L  Q  A  A  I  G  V  V  Q  Q  :  G  L  R  P  T  I  P  K  S  T  H  P  K  L  A  E  L  L  E  K  C  W  Q  Q  D  P  T  Q  R  P  D  F  S  E  I  L  D  I  L  K  Q  L  T  K  E  :  V  G  D  D  G  E  D  R  H  K  D  K  S  I  G  G  F  F  S  S  L  R  K  G  N  H  *  E  F  T  K  R  E  E  V  D  R  P  S  A  F  V  S  V  Y  R  F  S  D  I  Q  T  *  S  D  *  F  L  K  I  M  V  F  I  *  C  R  L  A  F  I  Y  Y  S  *  F  S  Q  G  C  K  L  V  S  K  A  L  A  T  L  Y  R  I  T  V  N  L  R  K  F  *  F  L  T  L  F   : F  *  K  E  I  T  M  K  T :   S  P  K  K  K </second_frame>
            <third_frame>   S  H  S  L  S  S  I  F  S  P  K  K  N  L  S  P  F  S  Y  L  P  I  K  S  T  L  N  P  F  L  L  F  I  M  K  N  F  L  *  I  M  E  T  T  F  L  C  Y  S  T  V  T  C  N  F  S  P  L  *  I  H  Y  K  E  E  E  I  L  *  I  L  *  F  C  I  C  E  W  R  W  T  T  T  R  V  A  G  A  E  R  W  S  P  C  R  P  S  K  I  G  Y  R  G  R  R  M  K  C  L  T  K  C  L  V  D  Y  R  I  *  I  S  K  R  L  N  S  L  A  L  K  T  S  F  G  F  T  L  I  A  S  L  F   : V  M  H  R  M  *  M  W  K  E  Q  K  M  C  S  C  T  R  G  C  W  T  *  R  R  I  L  R  I  D  L  P  L  M  S  A  L  C  R :   F  S  L  C  T  L  E  R  Q  P  I  L  L  M  *  I  L  Q  L  M  K  K  S  Q   : A  F  I  L  L  Q  L  L  V  H  H  Q  I  F  K  A  L  K  F  M  M  I  K  L  M  *  I  M  E  I  V  I  S  I  Q  L  R  G  Q  P   : G  Q  C  T  R  L  L  F  Q  L  L  T  S  Q  K  R  S  L  S :   *  P  I  *  Y  L  R  L  V  *  T  L  K  R  P  M  F  F  Q  L  L  M  V  S  P  W  M  S  L  W  L  M  D  G  R  M  R :   R  R  S  C  L  R  V  R  C  K  R  K  L  *  G  A  R :   S  S  H  K  S  C  L  Q  S  V  N  Q  V  K  H  L  N  Q  A  P  I  V  *  K  Y  L  L  M  D  L  M  T  G  K  L  I  S  A  C  *  N  L  K  I  K  *  H  L  G  H  L  E  I   : C  I  K  V  H  T  V  A  R  K  W  L  *  K  F  S  S  L  K  I  *  I  W  I  W  *  K  S  S  L  K  R  S  L  S  *   : G  K  F  G  T  K  M  L  F  N  L  *  G  H  A  H  D  L  P  T  C  A  S  *  Q  :  S  S  *  P  E  E  A  S  I  L  F  C  T  S  K  E  V  L  L  S  F  L  L  S  *  R  L  Q  L  M  F  L  R  E  *  V  I  C  T  K  I  T  *  F  I  V  I  *  R  L  P  I  F  *  W  M  N  M  E :   L  L  R  L  V  T  L  G  L  L  E  C  R  L  K  L  G  *  *  Q  L  K  L  E  R  I  D  G  W  L  L  R :   *  L  N  T  N  R  M  T  T  R  L  M  F  S  A  L  V  *  C  C  G  N  F  *  L  E  K :   F  H  M  H  T  *  H  H  Y  K  Q  Q  *  V  W  C  N  R :   V  Y  G  Q  Q  F  L  R  A  L  I  Q  S  L  L  N  F  L  K  N  A  G  S  K  T  Q  H  R  D  Q  I  S  R  R  F  W  I  F  *  S  N  *  Q  R  R :   L  E  M  M  E  R  T  D  T  R  T  N  Q  S  V  A  F  S  R  L  L  E  R  A  I  T  E  N  L  L  K  E  R  R  L  I  G  L  Q  L  L  S  R  C  T  D  S  L  I  S  K  L  D  L  I  S  F  *  K  S  W  F  L  S  N  V  A  W  H  S  F  T  I  P  N  L  V  R  G  A  S  W  *  V  K  L  W  Q  L  S  T  E  *  L  *  I  C  A  S  S  N  S  *  P  F  F  :  F  K  K  K  *  R  *  K   : H  H  Q  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36598" stop="36794"/>
                    <exon start="36949" stop="37063"/>
                    <exon start="39256" stop="39329"/>
                    <exon start="39473" stop="39592"/>
                    <exon start="39738" stop="39792"/>
                    <exon start="41219" stop="41329"/>
                    <exon start="42003" stop="42053"/>
                    <exon start="43308" stop="43468"/>
                    <exon start="43545" stop="43652"/>
                    <exon start="44160" stop="44233"/>
                    <exon start="44512" stop="44687"/>
                    <exon start="45370" stop="45465"/>
                    <exon start="46126" stop="46206"/>
                    <exon start="46291" stop="46344"/>
                    <exon start="46436" stop="46570"/>
                    <exon start="46653" stop="46733"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1686</number_coding_nucleotides>
                  <number_encoded_amino_acids>562</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAMDDNESCGSRAMEPLSPKQNRLQRQKNEVFNQVLSRLQDLNLQEVKLPGFEDQLWLHFNRLPVRYASDVNVERAEDVLMHKRLLDIAEDPENRPAFDVRLVQVQPMYTGTSTNTVDVDPSVNEEIPSIHPPPTFGSSPNLQGLEIHDDKAHVNHGDSDINSTSRTTRPMHEITFSTIDKPKTLTQLTNIISEIGLNIEEAHVFSTTDGFSLDVFVVDGWPYEETELLKSEVQKEVMRSKEQPQVLPPISEPGQTSESGSDSVKIPTDGSDDWEIDIRLLKFENKVASGSFGDLYKGTYCSQEVAIKVLKPENLNMDMVKEFSQEVFIMRKIRHKNVVQFIGACTRPPNLCIVTEFMTRGSIYTFLHKQRGAFKLPTLLKVAIDVSKGMSYLHQNNIIHRDLKTANLLMDEHGVVKVGDFGVARVQTQTGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGEIPYAYLTPLQAAIGVVQQGLRPTIPKSTHPKLAELLEKCWQQDPTQRPDFSEILDILKQLTKEVGDDGEDRHKDKSIGGFFSSLRKGNH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36400" stop="36597"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKFVPFLVFTHQINSKSIPSVHHEKFSLNYGNYFLMLLYCYLQLFPPVNPLQRGGDFVNSVILYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="36366" e_stop="36794"/>
            <exon e_start="36949" e_stop="37063"/>
            <exon e_start="39256" e_stop="39329"/>
            <exon e_start="39473" e_stop="39592"/>
            <exon e_start="39738" e_stop="39792"/>
            <exon e_start="41219" e_stop="41329"/>
            <exon e_start="42003" e_stop="42053"/>
            <exon e_start="43308" e_stop="43468"/>
            <exon e_start="43545" e_stop="43652"/>
            <exon e_start="44160" e_stop="44233"/>
            <exon e_start="44512" e_stop="44687"/>
            <exon e_start="45370" e_stop="45465"/>
            <exon e_start="46126" e_stop="46206"/>
            <exon e_start="46291" e_stop="46344"/>
            <exon e_start="46436" e_stop="46570"/>
            <exon e_start="46653" e_stop="46983"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.714" e_score="1.000"/>
          <exon-intron don_prob="0.018" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.999" e_score="0.989"/>
          <exon-intron don_prob="0.983" acc_prob="0.929" e_score="0.980"/>
          <exon-intron don_prob="0.235" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.209" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.737" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.783" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.839" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36366" e_stop="36794" e_length="429"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36949" e_stop="37063" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39256" e_stop="39329" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.714">
            <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39473" e_stop="39592" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.018" acc_prob="0.979">
            <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="39738" e_stop="39792" e_length="55"/>
          </exon>
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          <exon e_serial="6" e_score="0.989">
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          </intron>
          <exon e_serial="7" e_score="0.980">
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          </intron>
          <exon e_serial="9" e_score="1.000">
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          <intron i_serial="10" don_prob="1.000" acc_prob="0.737">
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          </intron>
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            <gDNA_exon_boundary e_start="45370" e_stop="45465" e_length="96"/>
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          <intron i_serial="13" don_prob="0.783" acc_prob="0.986">
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          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
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            <referenceDNA id="SGN-E737369" strand="+"/>
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          <PGS_line>
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          </PGS_line>
          <PGS_line>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202558" strand="+"/>
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          <PGS_line>
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              <exon start="36949" stop="36994"/>
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            <referenceDNA id="SGN-E205089" strand="+"/>
          </PGS_line>
          <PGS_line>
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              <exon start="36377" stop="36794"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254598" strand="+"/>
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          <PGS_line>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36389" stop="36794"/>
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            <referenceDNA id="SGN-E473299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36389" stop="36579"/>
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            <referenceDNA id="SGN-E698260" strand="+"/>
          </PGS_line>
          <PGS_line>
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            <referenceDNA id="SGN-E413051" strand="+"/>
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          <PGS_line>
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              <exon start="36396" stop="36794"/>
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            <referenceDNA id="SGN-E471600" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E309216" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E205059" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E487800" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E447188" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E483009" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E482972" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36529" stop="36794"/>
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            <referenceDNA id="SGN-E482098" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E486780" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39256" stop="39329"/>
              <exon start="39473" stop="39592"/>
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              <exon start="42003" stop="42053"/>
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              <exon start="43545" stop="43616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390539" strand="+"/>
          </PGS_line>
          <PGS_line>
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              <exon start="42037" stop="42053"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377945" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42037" stop="42053"/>
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            <referenceDNA id="SGN-E233178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43435" stop="43468"/>
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            <referenceDNA id="SGN-E306642" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43437" stop="43468"/>
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            <referenceDNA id="SGN-E307463" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
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              <exon start="46436" stop="46492"/>
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            <referenceDNA id="SGN-E570778" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E243521" strand="+"/>
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          <PGS_line>
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            <referenceDNA id="SGN-E241968" strand="+"/>
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          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44213" stop="44233"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44617" stop="44687"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46306" stop="46344"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351981" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46306" stop="46344"/>
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            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46334" stop="46344"/>
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              <exon start="46653" stop="46969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46335" stop="46344"/>
              <exon start="46436" stop="46570"/>
              <exon start="46653" stop="46966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46466" stop="46570"/>
              <exon start="46653" stop="46971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413052" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTCATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG : TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG : GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG : CATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAG : GCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAG : TTGACCAATATAATATCTGAGATTGGTCTGAACATTGAAGAGGCCCATGTTTTTTCAACTACTGATGGTTTCTCCTTGGATGTCTTTGTGGTTGATGGATGGCCGTATGAG : GAGACGGAGTTGCTTAAGAGTGAGGTGCAAAAGGAAGTTATGAGGAGCAAG : GAGCAGCCACAAGTCCTGCCTCCAATCAGTGAACCAGGTCAAACATCTGAATCAGGCTCCGATAGTGTAAAAATACCTACTGATGGATCTGATGACTGGGAAATTGATATCCGCCTGCTGAAATTTGAAAATAAAGTAGCATCTGGGTCATTTGGAGATCT : GTATAAAGGTACATACTGTAGCCAGGAAGTGGCTATAAAAGTTCTCAAGCCTGAAAATTTGAATATGGATATGGTAAAAGAGTTCTCTCAAGAGGTCTTTATCATGAG : GAAAATTCGGCACAAAAATGTTGTTCAATTTATAGGGGCATGCACACGACCTCCCAACCTGTGCATCGTGACAG : AGTTCATGACCAGAGGAAGCATCTATACTTTTTTGCACAAGCAAAGAGGTGCTTTTAAGCTTCCTACTCTCCTGAAGGTTGCAATTGATGTTTCTAAGGGAATGAGTTATCTGCACCAAAATAACATAATTCATCGTGATCTGAAGACTGCCAATCTTCTGATGGATGAACATGGA : GTTGTTAAGGTTGGTGACTTTGGGGTTGCTAGAGTGCAGACTCAAACTGGGGTGATGACAGCTGAAACTGGAACGTATAGATGGATGGCTCCTGAG : GTGATTGAACACAAACCGTATGACCACAAGGCTGATGTTTTCAGCTTTGGTATAGTGCTGTGGGAACTTCTGACTGGAGAA : ATTCCATATGCATACTTAACACCATTACAAGCAGCAATAGGTGTGGTGCAACAG : GGTCTACGGCCAACAATTCCTAAGAGCACTCATCCAAAGCTTGCTGAACTTCTTGAAAAATGCTGGCAGCAAGACCCAACACAGAGACCAGATTTCTCGGAGATTTTGGATATTCTGAAGCAACTAACAAAGGAG : GTTGGAGATGATGGAGAGGACAGACACAAGGACAAATCAATCGGTGGCTTTTTCTCGTCTCTTAGAAAGGGCAATCACTGAGAATTTACTAAAAGAGAGGAGGTTGATCGGCCTTCAGCTTTTGTCTCGGTGTACAGATTCTCTGATATCCAAACTTGATCTGATTAGTTTTTGAAAATCATGGTTTTTATCTAATGTCGCTTGGCATTCATTTACTATTCCTAATTTAGTCAGGGGTGCAAGCTGGTGAGTAAAGCTTTGGCAACTCTCTACAGAATAACTGTGAATTTGCGCAAGTTCTAATTCCTAACCCTTTTTTGTACCTTTCTTA</gDNA_template>
            <first_frame> L  L  I  L  S  P  P  S  F  P  L  K  K  I  C  P  L  S  R  I  Y  P  S  N  Q  L  *  I  H  S  F  C  S  S  *  K  I  F  S  K  L  W  K  L  L  S  Y  A  T  L  L  L  L  A  T  F  P  P  C  K  S  I  T  K  R  R  R  F  C  E  F  C  N  F  V  F  V  N  G  D  G  R  Q  R  E  L  R  E  Q  S  D  G  A  L  V  A  Q  A  K  S  A  T  E  A  E  E  *  S  V  *  P  S  A  *  *  T  T  G  F  E  S  P  R  G  *  T  P  W  L  *  R  P  A  L  A  S  L  *  S  P  P  C  S  :  L  C  I  G  C  K  C  G  K  S  R  R  C  A  H  A  Q  E  V  A  G  H  S  G  G  S  *  E  *  T  C  L  *  C  P  P  C  A   : G  S  A  Y  V  H  W  N  V  N  Q  Y  C  *  C  R  S  F  S  *  *  R  N  P  K  :  H  S  S  S  S  N  F  W  F  I  T  K  S  S  R  P  *  N  S  *  *  *  S  S  C  E  S  W  R  *  *  Y  Q  F  N  F  A  D  N  Q  :  A  N  A  R  D  Y  F  F  N  Y  *  Q  A  K  N  A  H  S   : V  D  Q  Y  N  I  *  D  W  S  E  H  *  R  G  P  C  F  F  N  Y  *  W  F  L  L  G  C  L  C  G  *  W  M  A  V  *   : G  D  G  V  A  *  E  *  G  A  K  G  S  Y  E  E  Q   : G  A  A  T  S  P  A  S  N  Q  *  T  R  S  N  I  *  I  R  L  R  *  C  K  N  T  Y  *  W  I  *  *  L  G  N  *  Y  P  P  A  E  I  *  K  *  S  S  I  W  V  I  W  R  S  :  V  *  R  Y  I  L  *  P  G  S  G  Y  K  S  S  Q  A  *  K  F  E  Y  G  Y  G  K  R  V  L  S  R  G  L  Y  H  E  :  E  N  S  A  Q  K  C  C  S  I  Y  R  G  M  H  T  T  S  Q  P  V  H  R  D  R :   V  H  D  Q  R  K  H  L  Y  F  F  A  Q  A  K  R  C  F  *  A  S  Y  S  P  E  G  C  N  *  C  F  *  G  N  E  L  S  A  P  K  *  H  N  S  S  *  S  E  D  C  Q  S  S  D  G  *  T  W   : S  C  *  G  W  *  L  W  G  C  *  S  A  D  S  N  W  G  D  D  S  *  N  W  N  V  *  M  D  G  S  *   : G  D  *  T  Q  T  V  *  P  Q  G  *  C  F  Q  L  W  Y  S  A  V  G  T  S  D  W  R   : N  S  I  C  I  L  N  T  I  T  S  S  N  R  C  G  A  T   : G  S  T  A  N  N  S  *  E  H  S  S  K  A  C  *  T  S  *  K  M  L  A  A  R  P  N  T  E  T  R  F  L  G  D  F  G  Y  S  E  A  T  N  K  G   : G  W  R  *  W  R  G  Q  T  Q  G  Q  I  N  R  W  L  F  L  V  S  *  K  G  Q  S  L  R  I  Y  *  K  R  G  G  *  S  A  F  S  F  C  L  G  V  Q  I  L  *  Y  P  N  L  I  *  L  V  F  E  N  H  G  F  Y  L  M  S  L  G  I  H  L  L  F  L  I  *  S  G  V  Q  A  G  E  *  S  F  G  N  S  L  Q  N  N  C  E  F  A  Q  V  L  I  P  N  P  F  L  Y  L  S   </first_frame>
            <second_frame>  F  S  F  S  L  L  H  L  F  P  *  K  K  F  V  P  F  L  V  F  T  H  Q  I  N  S  K  S  I  P  S  V  H  H  E  K  F  S  L  N  Y  G  N  Y  F  L  M  L  L  Y  C  Y  L  Q  L  F  P  P  V  N  P  L  Q  R  G  G  D  F  V  N  S  V  I  L  Y  L  *  M  A  M  D  D  N  E  S  C  G  S  R  A  M  E  P  L  S  P  K  Q  N  R  L  Q  R  Q  K  N  E  V  F  N  Q  V  L  S  R  L  Q  D  L  N  L  Q  E  V  K  L  P  G  F  E  D  Q  L  W  L  H  F  N  R  L  P  V  R :   Y  A  S  D  V  N  V  E  R  A  E  D  V  L  M  H  K  R  L  L  D  I  A  E  D  P  E  N  R  P  A  F  D  V  R  L  V  Q  :  V  Q  P  M  Y  T  G  T  S  T  N  T  V  D  V  D  P  S  V  N  E  E  I  P  S :   I  H  P  P  P  T  F  G  S  S  P  N  L  Q  G  L  E  I  H  D  D  K  A  H  V  N  H  G  D  S  D  I  N  S  T  S  R  T  T  R :   P  M  H  E  I  T  F  S  T  I  D  K  P  K  T  L  T  Q  :  L  T  N  I  I  S  E  I  G  L  N  I  E  E  A  H  V  F  S  T  T  D  G  F  S  L  D  V  F  V  V  D  G  W  P  Y  E  :  E  T  E  L  L  K  S  E  V  Q  K  E  V  M  R  S  K  :  E  Q  P  Q  V  L  P  P  I  S  E  P  G  Q  T  S  E  S  G  S  D  S  V  K  I  P  T  D  G  S  D  D  W  E  I  D  I  R  L  L  K  F  E  N  K  V  A  S  G  S  F  G  D  L :   Y  K  G  T  Y  C  S  Q  E  V  A  I  K  V  L  K  P  E  N  L  N  M  D  M  V  K  E  F  S  Q  E  V  F  I  M  R :   K  I  R  H  K  N  V  V  Q  F  I  G  A  C  T  R  P  P  N  L  C  I  V  T   : E  F  M  T  R  G  S  I  Y  T  F  L  H  K  Q  R  G  A  F  K  L  P  T  L  L  K  V  A  I  D  V  S  K  G  M  S  Y  L  H  Q  N  N  I  I  H  R  D  L  K  T  A  N  L  L  M  D  E  H  G  :  V  V  K  V  G  D  F  G  V  A  R  V  Q  T  Q  T  G  V  M  T  A  E  T  G  T  Y  R  W  M  A  P  E  :  V  I  E  H  K  P  Y  D  H  K  A  D  V  F  S  F  G  I  V  L  W  E  L  L  T  G  E  :  I  P  Y  A  Y  L  T  P  L  Q  A  A  I  G  V  V  Q  Q  :  G  L  R  P  T  I  P  K  S  T  H  P  K  L  A  E  L  L  E  K  C  W  Q  Q  D  P  T  Q  R  P  D  F  S  E  I  L  D  I  L  K  Q  L  T  K  E  :  V  G  D  D  G  E  D  R  H  K  D  K  S  I  G  G  F  F  S  S  L  R  K  G  N  H  *  E  F  T  K  R  E  E  V  D  R  P  S  A  F  V  S  V  Y  R  F  S  D  I  Q  T  *  S  D  *  F  L  K  I  M  V  F  I  *  C  R  L  A  F  I  Y  Y  S  *  F  S  Q  G  C  K  L  V  S  K  A  L  A  T  L  Y  R  I  T  V  N  L  R  K  F  *  F  L  T  L  F  C  T  F  L  </second_frame>
            <third_frame>   S  H  S  L  S  S  I  F  S  P  K  K  N  L  S  P  F  S  Y  L  P  I  K  S  T  L  N  P  F  L  L  F  I  M  K  N  F  L  *  I  M  E  T  T  F  L  C  Y  S  T  V  T  C  N  F  S  P  L  *  I  H  Y  K  E  E  E  I  L  *  I  L  *  F  C  I  C  E  W  R  W  T  T  T  R  V  A  G  A  E  R  W  S  P  C  R  P  S  K  I  G  Y  R  G  R  R  M  K  C  L  T  K  C  L  V  D  Y  R  I  *  I  S  K  R  L  N  S  L  A  L  K  T  S  F  G  F  T  L  I  A  S  L  F   : V  M  H  R  M  *  M  W  K  E  Q  K  M  C  S  C  T  R  G  C  W  T  *  R  R  I  L  R  I  D  L  P  L  M  S  A  L  C  R :   F  S  L  C  T  L  E  R  Q  P  I  L  L  M  *  I  L  Q  L  M  K  K  S  Q   : A  F  I  L  L  Q  L  L  V  H  H  Q  I  F  K  A  L  K  F  M  M  I  K  L  M  *  I  M  E  I  V  I  S  I  Q  L  R  G  Q  P   : G  Q  C  T  R  L  L  F  Q  L  L  T  S  Q  K  R  S  L  S :   *  P  I  *  Y  L  R  L  V  *  T  L  K  R  P  M  F  F  Q  L  L  M  V  S  P  W  M  S  L  W  L  M  D  G  R  M  R :   R  R  S  C  L  R  V  R  C  K  R  K  L  *  G  A  R :   S  S  H  K  S  C  L  Q  S  V  N  Q  V  K  H  L  N  Q  A  P  I  V  *  K  Y  L  L  M  D  L  M  T  G  K  L  I  S  A  C  *  N  L  K  I  K  *  H  L  G  H  L  E  I   : C  I  K  V  H  T  V  A  R  K  W  L  *  K  F  S  S  L  K  I  *  I  W  I  W  *  K  S  S  L  K  R  S  L  S  *   : G  K  F  G  T  K  M  L  F  N  L  *  G  H  A  H  D  L  P  T  C  A  S  *  Q  :  S  S  *  P  E  E  A  S  I  L  F  C  T  S  K  E  V  L  L  S  F  L  L  S  *  R  L  Q  L  M  F  L  R  E  *  V  I  C  T  K  I  T  *  F  I  V  I  *  R  L  P  I  F  *  W  M  N  M  E :   L  L  R  L  V  T  L  G  L  L  E  C  R  L  K  L  G  *  *  Q  L  K  L  E  R  I  D  G  W  L  L  R :   *  L  N  T  N  R  M  T  T  R  L  M  F  S  A  L  V  *  C  C  G  N  F  *  L  E  K :   F  H  M  H  T  *  H  H  Y  K  Q  Q  *  V  W  C  N  R :   V  Y  G  Q  Q  F  L  R  A  L  I  Q  S  L  L  N  F  L  K  N  A  G  S  K  T  Q  H  R  D  Q  I  S  R  R  F  W  I  F  *  S  N  *  Q  R  R :   L  E  M  M  E  R  T  D  T  R  T  N  Q  S  V  A  F  S  R  L  L  E  R  A  I  T  E  N  L  L  K  E  R  R  L  I  G  L  Q  L  L  S  R  C  T  D  S  L  I  S  K  L  D  L  I  S  F  *  K  S  W  F  L  S  N  V  A  W  H  S  F  T  I  P  N  L  V  R  G  A  S  W  *  V  K  L  W  Q  L  S  T  E  *  L  *  I  C  A  S  S  N  S  *  P  F  F  V  P  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36598" stop="36794"/>
                    <exon start="36949" stop="37063"/>
                    <exon start="39256" stop="39329"/>
                    <exon start="39473" stop="39592"/>
                    <exon start="39738" stop="39792"/>
                    <exon start="41219" stop="41329"/>
                    <exon start="42003" stop="42053"/>
                    <exon start="43308" stop="43468"/>
                    <exon start="43545" stop="43652"/>
                    <exon start="44160" stop="44233"/>
                    <exon start="44512" stop="44687"/>
                    <exon start="45370" stop="45465"/>
                    <exon start="46126" stop="46206"/>
                    <exon start="46291" stop="46344"/>
                    <exon start="46436" stop="46570"/>
                    <exon start="46653" stop="46733"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1686</number_coding_nucleotides>
                  <number_encoded_amino_acids>562</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAMDDNESCGSRAMEPLSPKQNRLQRQKNEVFNQVLSRLQDLNLQEVKLPGFEDQLWLHFNRLPVRYASDVNVERAEDVLMHKRLLDIAEDPENRPAFDVRLVQVQPMYTGTSTNTVDVDPSVNEEIPSIHPPPTFGSSPNLQGLEIHDDKAHVNHGDSDINSTSRTTRPMHEITFSTIDKPKTLTQLTNIISEIGLNIEEAHVFSTTDGFSLDVFVVDGWPYEETELLKSEVQKEVMRSKEQPQVLPPISEPGQTSESGSDSVKIPTDGSDDWEIDIRLLKFENKVASGSFGDLYKGTYCSQEVAIKVLKPENLNMDMVKEFSQEVFIMRKIRHKNVVQFIGACTRPPNLCIVTEFMTRGSIYTFLHKQRGAFKLPTLLKVAIDVSKGMSYLHQNNIIHRDLKTANLLMDEHGVVKVGDFGVARVQTQTGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGEIPYAYLTPLQAAIGVVQQGLRPTIPKSTHPKLAELLEKCWQQDPTQRPDFSEILDILKQLTKEVGDDGEDRHKDKSIGGFFSSLRKGNH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36400" stop="36597"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKFVPFLVFTHQINSKSIPSVHHEKFSLNYGNYFLMLLYCYLQLFPPVNPLQRGGDFVNSVILYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="36372" e_stop="36794"/>
            <exon e_start="36949" e_stop="37063"/>
            <exon e_start="39256" e_stop="39329"/>
            <exon e_start="39473" e_stop="39592"/>
            <exon e_start="39738" e_stop="39795"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.714" e_score="1.000"/>
          <exon-intron don_prob="0.018" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36372" e_stop="36794" e_length="423"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36795" i_stop="36948" i_length="154"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36949" e_stop="37063" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="37064" i_stop="39255" i_length="2192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39256" e_stop="39329" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.714">
            <gDNA_intron_boundary i_start="39330" i_stop="39472" i_length="143"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="39473" e_stop="39592" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.018" acc_prob="0.979">
            <gDNA_intron_boundary i_start="39593" i_stop="39737" i_length="145"/>
          </intron>
          <exon e_serial="5" e_score="0.966">
            <gDNA_exon_boundary e_start="39738" e_stop="39795" e_length="58"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36372" stop="36794"/>
              <exon start="36949" stop="37041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469801" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36373" stop="36794"/>
              <exon start="36949" stop="36995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202558" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36376" stop="36794"/>
              <exon start="36949" stop="36994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205089" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36377" stop="36794"/>
              <exon start="36949" stop="36994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36389" stop="36794"/>
              <exon start="36949" stop="37063"/>
              <exon start="39256" stop="39329"/>
              <exon start="39473" stop="39480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36389" stop="36794"/>
              <exon start="36949" stop="36994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36389" stop="36579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36396" stop="36794"/>
              <exon start="36949" stop="37063"/>
              <exon start="39256" stop="39329"/>
              <exon start="39473" stop="39479"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36396" stop="36794"/>
              <exon start="36949" stop="36994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36403" stop="36794"/>
              <exon start="36949" stop="37063"/>
              <exon start="39256" stop="39297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36403" stop="36794"/>
              <exon start="36949" stop="36998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36479" stop="36794"/>
              <exon start="36949" stop="37063"/>
              <exon start="39256" stop="39297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36498" stop="36794"/>
              <exon start="36949" stop="37063"/>
              <exon start="39256" stop="39329"/>
              <exon start="39473" stop="39578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36529" stop="36794"/>
              <exon start="36949" stop="37063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36547" stop="36794"/>
              <exon start="36949" stop="37063"/>
              <exon start="39256" stop="39329"/>
              <exon start="39473" stop="39592"/>
              <exon start="39738" stop="39795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36548" stop="36794"/>
              <exon start="36949" stop="37063"/>
              <exon start="39256" stop="39329"/>
              <exon start="39473" stop="39569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271197" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCTCTCTCCTCCATCTTTTCCCCTAAAAAAAATTTGTCCCCTTTCTCGTATTTACCCATCAAATCAACTCTAAATCCATTCCTTCTGTTCATCATGAAAAATTTTCTCTAAATTATGGAAACTACTTTCTTATGCTACTCTACTGTTACTTGCAACTTTTCCCCCCTGTAAATCCATTACAAAGAGGAGGAGATTTTGTGAATTCTGTAATTTTGTATTTGTGAATGGCGATGGACGACAACGAGAGTTGCGGGAGCAGAGCGATGGAGCCCTTGTCGCCCAAGCAAAATCGGCTACAGAGGCAGAAGAATGAAGTGTTTAACCAAGTGCTTAGTAGACTACAGGATTTGAATCTCCAAGAGGTTAAACTCCCTGGCTTTGAAGACCAGCTTTGGCTTCACTTTAATCGCCTCCCTGTTCG : TTATGCATCGGATGTAAATGTGGAAAGAGCAGAAGATGTGCTCATGCACAAGAGGTTGCTGGACATAGCGGAGGATCCTGAGAATAGACCTGCCTTTGATGTCCGCCTTGTGCAG : GTTCAGCCTATGTACACTGGAACGTCAACCAATACTGTTGATGTAGATCCTTCAGTTAATGAAGAAATCCCAAG : CATTCATCCTCCTCCAACTTTTGGTTCATCACCAAATCTTCAAGGCCTTGAAATTCATGATGATAAAGCTCATGTGAATCATGGAGATAGTGATATCAATTCAACTTCGCGGACAACCAG : GCCAATGCACGAGATTACTTTTTCAACTATTGACAAGCCAAAAACGCTCACTCAGGTG</gDNA_template>
            <first_frame> I  L  S  P  P  S  F  P  L  K  K  I  C  P  L  S  R  I  Y  P  S  N  Q  L  *  I  H  S  F  C  S  S  *  K  I  F  S  K  L  W  K  L  L  S  Y  A  T  L  L  L  L  A  T  F  P  P  C  K  S  I  T  K  R  R  R  F  C  E  F  C  N  F  V  F  V  N  G  D  G  R  Q  R  E  L  R  E  Q  S  D  G  A  L  V  A  Q  A  K  S  A  T  E  A  E  E  *  S  V  *  P  S  A  *  *  T  T  G  F  E  S  P  R  G  *  T  P  W  L  *  R  P  A  L  A  S  L  *  S  P  P  C  S  :  L  C  I  G  C  K  C  G  K  S  R  R  C  A  H  A  Q  E  V  A  G  H  S  G  G  S  *  E  *  T  C  L  *  C  P  P  C  A   : G  S  A  Y  V  H  W  N  V  N  Q  Y  C  *  C  R  S  F  S  *  *  R  N  P  K  :  H  S  S  S  S  N  F  W  F  I  T  K  S  S  R  P  *  N  S  *  *  *  S  S  C  E  S  W  R  *  *  Y  Q  F  N  F  A  D  N  Q  :  A  N  A  R  D  Y  F  F  N  Y  *  Q  A  K  N  A  H  S  G  </first_frame>
            <second_frame>  F  S  L  L  H  L  F  P  *  K  K  F  V  P  F  L  V  F  T  H  Q  I  N  S  K  S  I  P  S  V  H  H  E  K  F  S  L  N  Y  G  N  Y  F  L  M  L  L  Y  C  Y  L  Q  L  F  P  P  V  N  P  L  Q  R  G  G  D  F  V  N  S  V  I  L  Y  L  *  M  A  M  D  D  N  E  S  C  G  S  R  A  M  E  P  L  S  P  K  Q  N  R  L  Q  R  Q  K  N  E  V  F  N  Q  V  L  S  R  L  Q  D  L  N  L  Q  E  V  K  L  P  G  F  E  D  Q  L  W  L  H  F  N  R  L  P  V  R :   Y  A  S  D  V  N  V  E  R  A  E  D  V  L  M  H  K  R  L  L  D  I  A  E  D  P  E  N  R  P  A  F  D  V  R  L  V  Q  :  V  Q  P  M  Y  T  G  T  S  T  N  T  V  D  V  D  P  S  V  N  E  E  I  P  S :   I  H  P  P  P  T  F  G  S  S  P  N  L  Q  G  L  E  I  H  D  D  K  A  H  V  N  H  G  D  S  D  I  N  S  T  S  R  T  T  R :   P  M  H  E  I  T  F  S  T  I  D  K  P  K  T  L  T  Q  V </second_frame>
            <third_frame>   S  L  S  S  I  F  S  P  K  K  N  L  S  P  F  S  Y  L  P  I  K  S  T  L  N  P  F  L  L  F  I  M  K  N  F  L  *  I  M  E  T  T  F  L  C  Y  S  T  V  T  C  N  F  S  P  L  *  I  H  Y  K  E  E  E  I  L  *  I  L  *  F  C  I  C  E  W  R  W  T  T  T  R  V  A  G  A  E  R  W  S  P  C  R  P  S  K  I  G  Y  R  G  R  R  M  K  C  L  T  K  C  L  V  D  Y  R  I  *  I  S  K  R  L  N  S  L  A  L  K  T  S  F  G  F  T  L  I  A  S  L  F   : V  M  H  R  M  *  M  W  K  E  Q  K  M  C  S  C  T  R  G  C  W  T  *  R  R  I  L  R  I  D  L  P  L  M  S  A  L  C  R :   F  S  L  C  T  L  E  R  Q  P  I  L  L  M  *  I  L  Q  L  M  K  K  S  Q   : A  F  I  L  L  Q  L  L  V  H  H  Q  I  F  K  A  L  K  F  M  M  I  K  L  M  *  I  M  E  I  V  I  S  I  Q  L  R  G  Q  P   : G  Q  C  T  R  L  L  F  Q  L  L  T  S  Q  K  R  S  L  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36598" stop="36794"/>
                    <exon start="36949" stop="37063"/>
                    <exon start="39256" stop="39329"/>
                    <exon start="39473" stop="39592"/>
                    <exon start="39738" stop="39795"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAMDDNESCGSRAMEPLSPKQNRLQRQKNEVFNQVLSRLQDLNLQEVKLPGFEDQLWLHFNRLPVRYASDVNVERAEDVLMHKRLLDIAEDPENRPAFDVRLVQVQPMYTGTSTNTVDVDPSVNEEIPSIHPPPTFGSSPNLQGLEIHDDKAHVNHGDSDINSTSRTTRPMHEITFSTIDKPKTLTQV</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36400" stop="36597"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKFVPFLVFTHQINSKSIPSVHHEKFSLNYGNYFLMLLYCYLQLFPPVNPLQRGGDFVNSVILYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="52488" PGL_stop="49167"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52488" e_stop="52308"/>
            <exon e_start="52203" e_stop="52102"/>
            <exon e_start="52015" e_stop="51905"/>
            <exon e_start="51765" e_stop="51692"/>
            <exon e_start="50577" e_stop="50507"/>
            <exon e_start="50399" e_stop="50346"/>
            <exon e_start="50168" e_stop="49826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.429" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52488" e_stop="52308" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.429">
            <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52203" e_stop="52102" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.764" acc_prob="0.993">
            <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52015" e_stop="51905" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51765" e_stop="51692" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.991">
            <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="50577" e_stop="50507" e_length="71"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="50399" e_stop="50346" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.927" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="50168" e_stop="49826" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52488" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52479" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52411" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52408" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52408" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52407" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52406" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52406" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52404" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52404" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52401" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52400" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52400" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51985"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274193" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52382" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50550"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52373" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52371" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52365" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52342" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52328" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300461" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51999" stop="51905"/>
              <exon start="51765" stop="51693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51743" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296251" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51743" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51737" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50351" stop="50346"/>
              <exon start="50168" stop="49839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50102" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298772" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATACACTTGAAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG : CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG : CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG : AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG : GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT : GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT : GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCATAACTT</gDNA_template>
            <first_frame> I  H  L  K  K  T  L  L  S  S  P  I  N  I  N  L  P  F  I  S  H  H  Q  T  K  *  L  N  N  F  H  R  N  K  Q  S  *  E  L  F  P  F  I  Q  P  H  F  H  L  L  S  S  M  V  P  R  I  W  H  K   : A  G  S  I  D  R  F  R  *  F  Q  W  R  G  L  N  F  S  L  K  *  D  V  T  L  V  L  A  I  E  I  Q  V  L   : A  G  W  Q  Q  L  E  R  K  C  T  T  P  R  F  L  L  L  F  L  F  E  L  H  L  N  C  F  K  L  A  I  V  I  *  M  S   : E  L  L  R  S  T  M  M  G  M  L  L  E  P  *  T  F  L  T  C  L  E  L  A  Q  :  G  *  *  R  T  P  I  S  W  R  K  C  W  N  N  S  G  R  M  M  R  L  *  L :   D  A  S  W  V  R  D  H  L  W  L  Q  L  N  F  L  L  L :   D  L  L  G  *  L  T  L  L  V  D  M  L  R  G  Q  R  V  D  F  R  L  S  L  E  G  L  L  F  T  H  I  *  K  G  *  I  F  K  *  V  H  T  S  S  Q  H  G  E  I  N  S  L  S  S  H  Q  K  L  E  G  A  T  C  K  I  S  C  T  V  I  Y  S  R  *  *  *  Y  S  M  W  E  N  L  Y  C  K  K  Y  V  *  I  L  F  S  *  F  C  Y  N  K  *  Y  L  P  E  R  P  L  I  C  S  *  L </first_frame>
            <second_frame>  Y  T  *  K  K  P  S  C  L  H  P  *  I  S  I  S  L  S  F  L  T  I  K  Q  N  N  *  T  T  S  T  G  T  N  N  H  E  N  Y  F  P  S  F  N  L  I  F  T  C  *  V  P  W  Y  Q  E  F  G  T  K  :  Q  D  Q  *  I  G  F  V  D  S  N  G  E  V  S  I  S  A  *  N  K  T  *  H  W  Y  *  Q  *  K  S  K  F  *  :  L  D  G  N  S  W  R  E  S  A  Q  L  H  G  S  Y  F  C  S  C  S  S  C  T  *  I  A  S  S  W  P  S  L  F  R  C  Q  :  N  Y  *  G  V  Q  *  W  A  C  C  W  S  H  K  H  S  L  H  A  *  N  W  L  R :   D  D  K  E  P  Q  F  L  G  G  S  V  G  T  I  R  E  G  *  *  D  Y  S   : W  M  P  V  G  *  E  I  I  Y  G  C  N  *  T  S  C  C   : W  I  Y  W  G  D  *  H  C  W  W  I  C  C  V  D  R  E  W  T  S  D  *  V  L  K  A  F  Y  L  L  T  Y  K  K  G  R  F  L  N  K  Y  T  P  V  V  N  M  A  K  S  I  P  F  L  H  I  K  N  *  K  E  Q  L  A  K  S  L  V  Q  *  F  I  A  G  D  D  D  I  R  C  G  R  I  C  I  A  R  N  M  C  K  Y  C  S  P  N  S  A  I  I  N  N  I  C  L  K  G  L  S  S  A  H  N   </second_frame>
            <third_frame>   T  L  E  K  N  P  P  V  F  T  H  K  Y  Q  S  P  F  H  F  S  P  S  N  K  I  I  E  Q  L  P  Q  E  Q  T  I  M  R  T  I  S  L  H  S  T  S  F  S  L  V  E  F  H  G  T  K  N  L  A  Q  S :   R  I  N  R  S  V  S  L  I  P  M  A  R  S  Q  F  Q  P  K  I  R  R  D  I  G  T  S  N  R  N  P  S  F  S :   W  M  A  T  V  G  E  K  V  H  N  S  T  V  P  T  S  V  P  V  R  V  A  L  E  L  L  Q  A  G  H  R  Y  L  D  V  R :   T  T  E  E  Y  N  D  G  H  A  A  G  A  I  N  I  P  Y  M  L  R  I  G  S   : G  M  I  K  N  P  N  F  L  E  E  V  L  E  Q  F  G  K  D  D  E  I  I  V  :  G  C  Q  L  G  K  R  S  F  M  A  A  T  E  L  L  A  A  :  G  F  T  G  V  T  D  I  A  G  G  Y  A  A  W  T  E  S  G  L  P  I  E  S  *  R  P  F  I  Y  S  H  I  K  R  V  D  F  *  I  S  T  H  Q  *  S  T  W  R  N  Q  F  P  F  F  T  S  K  I  R  R  S  N  L  Q  N  L  L  Y  S  N  L  *  Q  V  M  M  I  F  D  V  G  E  S  V  L  Q  E  I  C  V  N  I  V  L  L  I  L  L  *  *  I  I  F  A  *  K  A  S  H  L  L  I  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52486" stop="52308"/>
                    <exon start="52203" stop="52102"/>
                    <exon start="52015" stop="51905"/>
                    <exon start="51765" stop="51692"/>
                    <exon start="50577" stop="50507"/>
                    <exon start="50399" stop="50346"/>
                    <exon start="50168" stop="50094"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLEKNPPVFTHKYQSPFHFSPSNKIIEQLPQEQTIMRTISLHSTSFSLVEFHGTKNLAQSRINRSVSLIPMARSQFQPKIRRDIGTSNRNPSFSWMATVGEKVHNSTVPTSVPVRVALELLQAGHRYLDVRTTEEYNDGHAAGAINIPYMLRIGSGMIKNPNFLEEVLEQFGKDDEIIVGCQLGKRSFMAATELLAAGFTGVTDIAGGYAAWTESGLPIES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="52488" e_stop="52308"/>
            <exon e_start="52203" e_stop="52102"/>
            <exon e_start="52015" e_stop="51905"/>
            <exon e_start="51765" e_stop="51692"/>
            <exon e_start="50577" e_stop="50507"/>
            <exon e_start="50399" e_stop="50346"/>
            <exon e_start="50168" e_stop="49848"/>
            <exon e_start="49783" e_stop="49761"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.429" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.682"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52488" e_stop="52308" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.429">
            <gDNA_intron_boundary i_start="52307" i_stop="52204" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52203" e_stop="52102" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.764" acc_prob="0.993">
            <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52015" e_stop="51905" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51765" e_stop="51692" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.991">
            <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="50577" e_stop="50507" e_length="71"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="50399" e_stop="50346" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.927" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="50168" e_stop="49848" e_length="321"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="49847" i_stop="49784" i_length="64"/>
          </intron>
          <exon e_serial="8" e_score="0.682">
            <gDNA_exon_boundary e_start="49783" e_stop="49761" e_length="23"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52488" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52479" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52411" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52408" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52408" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52407" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295587" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52406" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52406" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52404" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291966" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52404" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52401" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52400" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52400" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51985"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274193" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52382" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50550"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52373" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52371" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52365" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52342" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52328" stop="52308"/>
              <exon start="52203" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300461" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52141" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
              <exon start="49783" stop="49762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51999" stop="51905"/>
              <exon start="51765" stop="51693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50568" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
              <exon start="49783" stop="49761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50102" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298772" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATACACTTGAAAAAAACCCTCCTGTCTTCACCCATAAATATCAATCTCCCTTTCATTTCTCACCATCAAACAAAATAATTGAACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG : CAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG : CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG : AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG : GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT : GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT : GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAG : AAATTATAAAGTAAAGAACAAAG</gDNA_template>
            <first_frame> I  H  L  K  K  T  L  L  S  S  P  I  N  I  N  L  P  F  I  S  H  H  Q  T  K  *  L  N  N  F  H  R  N  K  Q  S  *  E  L  F  P  F  I  Q  P  H  F  H  L  L  S  S  M  V  P  R  I  W  H  K   : A  G  S  I  D  R  F  R  *  F  Q  W  R  G  L  N  F  S  L  K  *  D  V  T  L  V  L  A  I  E  I  Q  V  L   : A  G  W  Q  Q  L  E  R  K  C  T  T  P  R  F  L  L  L  F  L  F  E  L  H  L  N  C  F  K  L  A  I  V  I  *  M  S   : E  L  L  R  S  T  M  M  G  M  L  L  E  P  *  T  F  L  T  C  L  E  L  A  Q  :  G  *  *  R  T  P  I  S  W  R  K  C  W  N  N  S  G  R  M  M  R  L  *  L :   D  A  S  W  V  R  D  H  L  W  L  Q  L  N  F  L  L  L :   D  L  L  G  *  L  T  L  L  V  D  M  L  R  G  Q  R  V  D  F  R  L  S  L  E  G  L  L  F  T  H  I  *  K  G  *  I  F  K  *  V  H  T  S  S  Q  H  G  E  I  N  S  L  S  S  H  Q  K  L  E  G  A  T  C  K  I  S  C  T  V  I  Y  S  R  *  *  *  Y  S  M  W  E  N  L  Y  C  K  K  Y  V  *  I  L  F  S  *  F  C  Y  N  K  *  Y  L  P  E  R :   N  Y  K  V  K  N  K  </first_frame>
            <second_frame>  Y  T  *  K  K  P  S  C  L  H  P  *  I  S  I  S  L  S  F  L  T  I  K  Q  N  N  *  T  T  S  T  G  T  N  N  H  E  N  Y  F  P  S  F  N  L  I  F  T  C  *  V  P  W  Y  Q  E  F  G  T  K  :  Q  D  Q  *  I  G  F  V  D  S  N  G  E  V  S  I  S  A  *  N  K  T  *  H  W  Y  *  Q  *  K  S  K  F  *  :  L  D  G  N  S  W  R  E  S  A  Q  L  H  G  S  Y  F  C  S  C  S  S  C  T  *  I  A  S  S  W  P  S  L  F  R  C  Q  :  N  Y  *  G  V  Q  *  W  A  C  C  W  S  H  K  H  S  L  H  A  *  N  W  L  R :   D  D  K  E  P  Q  F  L  G  G  S  V  G  T  I  R  E  G  *  *  D  Y  S   : W  M  P  V  G  *  E  I  I  Y  G  C  N  *  T  S  C  C   : W  I  Y  W  G  D  *  H  C  W  W  I  C  C  V  D  R  E  W  T  S  D  *  V  L  K  A  F  Y  L  L  T  Y  K  K  G  R  F  L  N  K  Y  T  P  V  V  N  M  A  K  S  I  P  F  L  H  I  K  N  *  K  E  Q  L  A  K  S  L  V  Q  *  F  I  A  G  D  D  D  I  R  C  G  R  I  C  I  A  R  N  M  C  K  Y  C  S  P  N  S  A  I  I  N  N  I  C  L  K   : E  I  I  K  *  R  T  K </second_frame>
            <third_frame>   T  L  E  K  N  P  P  V  F  T  H  K  Y  Q  S  P  F  H  F  S  P  S  N  K  I  I  E  Q  L  P  Q  E  Q  T  I  M  R  T  I  S  L  H  S  T  S  F  S  L  V  E  F  H  G  T  K  N  L  A  Q  S :   R  I  N  R  S  V  S  L  I  P  M  A  R  S  Q  F  Q  P  K  I  R  R  D  I  G  T  S  N  R  N  P  S  F  S :   W  M  A  T  V  G  E  K  V  H  N  S  T  V  P  T  S  V  P  V  R  V  A  L  E  L  L  Q  A  G  H  R  Y  L  D  V  R :   T  T  E  E  Y  N  D  G  H  A  A  G  A  I  N  I  P  Y  M  L  R  I  G  S   : G  M  I  K  N  P  N  F  L  E  E  V  L  E  Q  F  G  K  D  D  E  I  I  V  :  G  C  Q  L  G  K  R  S  F  M  A  A  T  E  L  L  A  A  :  G  F  T  G  V  T  D  I  A  G  G  Y  A  A  W  T  E  S  G  L  P  I  E  S  *  R  P  F  I  Y  S  H  I  K  R  V  D  F  *  I  S  T  H  Q  *  S  T  W  R  N  Q  F  P  F  F  T  S  K  I  R  R  S  N  L  Q  N  L  L  Y  S  N  L  *  Q  V  M  M  I  F  D  V  G  E  S  V  L  Q  E  I  C  V  N  I  V  L  L  I  L  L  *  *  I  I  F  A  *  K  :  K  L  *  S  K  E  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52486" stop="52308"/>
                    <exon start="52203" stop="52102"/>
                    <exon start="52015" stop="51905"/>
                    <exon start="51765" stop="51692"/>
                    <exon start="50577" stop="50507"/>
                    <exon start="50399" stop="50346"/>
                    <exon start="50168" stop="50094"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLEKNPPVFTHKYQSPFHFSPSNKIIEQLPQEQTIMRTISLHSTSFSLVEFHGTKNLAQSRINRSVSLIPMARSQFQPKIRRDIGTSNRNPSFSWMATVGEKVHNSTVPTSVPVRVALELLQAGHRYLDVRTTEEYNDGHAAGAINIPYMLRIGSGMIKNPNFLEEVLEQFGKDDEIIVGCQLGKRSFMAATELLAAGFTGVTDIAGGYAAWTESGLPIES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="52406" e_stop="52308"/>
            <exon e_start="52206" e_stop="52102"/>
            <exon e_start="52015" e_stop="51905"/>
            <exon e_start="51765" e_stop="51692"/>
            <exon e_start="50577" e_stop="50507"/>
            <exon e_start="50399" e_stop="50346"/>
            <exon e_start="50168" e_stop="49826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.781" e_score="0.990"/>
          <exon-intron don_prob="0.764" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="52406" e_stop="52308" e_length="99"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.781">
            <gDNA_intron_boundary i_start="52307" i_stop="52207" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52206" e_stop="52102" e_length="105"/>
          </exon>
          <intron i_serial="2" don_prob="0.764" acc_prob="0.993">
            <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52015" e_stop="51905" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51765" e_stop="51692" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.991">
            <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="50577" e_stop="50507" e_length="71"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="50399" e_stop="50346" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.927" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="50168" e_stop="49826" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52406" stop="52308"/>
              <exon start="52206" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52321" stop="52308"/>
              <exon start="52206" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51999" stop="51905"/>
              <exon start="51765" stop="51693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51743" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296251" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51743" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51737" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50351" stop="50346"/>
              <exon start="50168" stop="49839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50102" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298772" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAACTTCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG : CAGCAGGATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG : CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG : AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG : GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT : GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT : GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCATAACTT</gDNA_template>
            <first_frame> T  T  S  T  G  T  N  N  H  E  N  Y  F  P  S  F  N  L  I  F  T  C  *  V  P  W  Y  Q  E  F  G  T  K  :  Q  Q  D  Q  *  I  G  F  V  D  S  N  G  E  V  S  I  S  A  *  N  K  T  *  H  W  Y  *  Q  *  K  S  K  F  *  :  L  D  G  N  S  W  R  E  S  A  Q  L  H  G  S  Y  F  C  S  C  S  S  C  T  *  I  A  S  S  W  P  S  L  F  R  C  Q  :  N  Y  *  G  V  Q  *  W  A  C  C  W  S  H  K  H  S  L  H  A  *  N  W  L  R :   D  D  K  E  P  Q  F  L  G  G  S  V  G  T  I  R  E  G  *  *  D  Y  S   : W  M  P  V  G  *  E  I  I  Y  G  C  N  *  T  S  C  C   : W  I  Y  W  G  D  *  H  C  W  W  I  C  C  V  D  R  E  W  T  S  D  *  V  L  K  A  F  Y  L  L  T  Y  K  K  G  R  F  L  N  K  Y  T  P  V  V  N  M  A  K  S  I  P  F  L  H  I  K  N  *  K  E  Q  L  A  K  S  L  V  Q  *  F  I  A  G  D  D  D  I  R  C  G  R  I  C  I  A  R  N  M  C  K  Y  C  S  P  N  S  A  I  I  N  N  I  C  L  K  G  L  S  S  A  H  N   </first_frame>
            <second_frame>  Q  L  P  Q  E  Q  T  I  M  R  T  I  S  L  H  S  T  S  F  S  L  V  E  F  H  G  T  K  N  L  A  Q  S :   S  R  I  N  R  S  V  S  L  I  P  M  A  R  S  Q  F  Q  P  K  I  R  R  D  I  G  T  S  N  R  N  P  S  F  S :   W  M  A  T  V  G  E  K  V  H  N  S  T  V  P  T  S  V  P  V  R  V  A  L  E  L  L  Q  A  G  H  R  Y  L  D  V  R :   T  T  E  E  Y  N  D  G  H  A  A  G  A  I  N  I  P  Y  M  L  R  I  G  S   : G  M  I  K  N  P  N  F  L  E  E  V  L  E  Q  F  G  K  D  D  E  I  I  V  :  G  C  Q  L  G  K  R  S  F  M  A  A  T  E  L  L  A  A  :  G  F  T  G  V  T  D  I  A  G  G  Y  A  A  W  T  E  S  G  L  P  I  E  S  *  R  P  F  I  Y  S  H  I  K  R  V  D  F  *  I  S  T  H  Q  *  S  T  W  R  N  Q  F  P  F  F  T  S  K  I  R  R  S  N  L  Q  N  L  L  Y  S  N  L  *  Q  V  M  M  I  F  D  V  G  E  S  V  L  Q  E  I  C  V  N  I  V  L  L  I  L  L  *  *  I  I  F  A  *  K  A  S  H  L  L  I  T  </second_frame>
            <third_frame>   N  F  H  R  N  K  Q  S  *  E  L  F  P  F  I  Q  P  H  F  H  L  L  S  S  M  V  P  R  I  W  H  K   : A  A  G  S  I  D  R  F  R  *  F  Q  W  R  G  L  N  F  S  L  K  *  D  V  T  L  V  L  A  I  E  I  Q  V  L   : A  G  W  Q  Q  L  E  R  K  C  T  T  P  R  F  L  L  L  F  L  F  E  L  H  L  N  C  F  K  L  A  I  V  I  *  M  S   : E  L  L  R  S  T  M  M  G  M  L  L  E  P  *  T  F  L  T  C  L  E  L  A  Q  :  G  *  *  R  T  P  I  S  W  R  K  C  W  N  N  S  G  R  M  M  R  L  *  L :   D  A  S  W  V  R  D  H  L  W  L  Q  L  N  F  L  L  L :   D  L  L  G  *  L  T  L  L  V  D  M  L  R  G  Q  R  V  D  F  R  L  S  L  E  G  L  L  F  T  H  I  *  K  G  *  I  F  K  *  V  H  T  S  S  Q  H  G  E  I  N  S  L  S  S  H  Q  K  L  E  G  A  T  C  K  I  S  C  T  V  I  Y  S  R  *  *  *  Y  S  M  W  E  N  L  Y  C  K  K  Y  V  *  I  L  F  S  *  F  C  Y  N  K  *  Y  L  P  E  R  P  L  I  C  S  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52405" stop="52308"/>
                    <exon start="52206" stop="52102"/>
                    <exon start="52015" stop="51905"/>
                    <exon start="51765" stop="51692"/>
                    <exon start="50577" stop="50507"/>
                    <exon start="50399" stop="50346"/>
                    <exon start="50168" stop="50094"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>585</number_coding_nucleotides>
                  <number_encoded_amino_acids>195</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLPQEQTIMRTISLHSTSFSLVEFHGTKNLAQSSRINRSVSLIPMARSQFQPKIRRDIGTSNRNPSFSWMATVGEKVHNSTVPTSVPVRVALELLQAGHRYLDVRTTEEYNDGHAAGAINIPYMLRIGSGMIKNPNFLEEVLEQFGKDDEIIVGCQLGKRSFMAATELLAAGFTGVTDIAGGYAAWTESGLPIES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="52400" e_stop="52308"/>
            <exon e_start="52200" e_stop="52102"/>
            <exon e_start="52015" e_stop="51905"/>
            <exon e_start="51765" e_stop="51692"/>
            <exon e_start="50577" e_stop="50507"/>
            <exon e_start="50399" e_stop="50346"/>
            <exon e_start="50168" e_stop="49826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52400" e_stop="52308" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="52307" i_stop="52201" i_length="107"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52200" e_stop="52102" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.764" acc_prob="0.993">
            <gDNA_intron_boundary i_start="52101" i_stop="52016" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52015" e_stop="51905" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="51904" i_stop="51766" i_length="139"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51765" e_stop="51692" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.991">
            <gDNA_intron_boundary i_start="51691" i_stop="50578" i_length="1114"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="50577" e_stop="50507" e_length="71"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="50399" e_stop="50346" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.927" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="50168" e_stop="49826" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52400" stop="52308"/>
              <exon start="52200" stop="52102"/>
              <exon start="52015" stop="51905"/>
              <exon start="51765" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="50074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51999" stop="51905"/>
              <exon start="51765" stop="51693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51743" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296251" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51743" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51737" stop="51692"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50351" stop="50346"/>
              <exon start="50168" stop="49839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50102" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298772" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCACAGGAACAAACAATCATGAGAACTATTTCCCTTCATTCAACCTCATTTTCACTTGTTGAGTTCCATGGTACCAAGAATTTGGCACAAAG : GATCAATAGATCGGTTTCGTTGATTCCAATGGCGAGGTCTCAATTTCAGCCTAAAATAAGACGTGACATTGGTACTAGCAATAGAAATCCAAGTTTTAG : CTGGATGGCAACAGTTGGAGAGAAAGTGCACAACTCCACGGTTCCTACTTCTGTTCCTGTTCGAGTTGCACTTGAATTGCTTCAAGCTGGCCATCGTTATTTAGATGTCAG : AACTACTGAGGAGTACAATGATGGGCATGCTGCTGGAGCCATAAACATTCCTTACATGCTTAGAATTGGCTCAG : GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT : GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT : GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAGGCCTCTCATCTGCTCATAACTT</gDNA_template>
            <first_frame> S  T  G  T  N  N  H  E  N  Y  F  P  S  F  N  L  I  F  T  C  *  V  P  W  Y  Q  E  F  G  T  K  :  D  Q  *  I  G  F  V  D  S  N  G  E  V  S  I  S  A  *  N  K  T  *  H  W  Y  *  Q  *  K  S  K  F  *  :  L  D  G  N  S  W  R  E  S  A  Q  L  H  G  S  Y  F  C  S  C  S  S  C  T  *  I  A  S  S  W  P  S  L  F  R  C  Q  :  N  Y  *  G  V  Q  *  W  A  C  C  W  S  H  K  H  S  L  H  A  *  N  W  L  R :   D  D  K  E  P  Q  F  L  G  G  S  V  G  T  I  R  E  G  *  *  D  Y  S   : W  M  P  V  G  *  E  I  I  Y  G  C  N  *  T  S  C  C   : W  I  Y  W  G  D  *  H  C  W  W  I  C  C  V  D  R  E  W  T  S  D  *  V  L  K  A  F  Y  L  L  T  Y  K  K  G  R  F  L  N  K  Y  T  P  V  V  N  M  A  K  S  I  P  F  L  H  I  K  N  *  K  E  Q  L  A  K  S  L  V  Q  *  F  I  A  G  D  D  D  I  R  C  G  R  I  C  I  A  R  N  M  C  K  Y  C  S  P  N  S  A  I  I  N  N  I  C  L  K  G  L  S  S  A  H  N   </first_frame>
            <second_frame>  P  Q  E  Q  T  I  M  R  T  I  S  L  H  S  T  S  F  S  L  V  E  F  H  G  T  K  N  L  A  Q  R :   I  N  R  S  V  S  L  I  P  M  A  R  S  Q  F  Q  P  K  I  R  R  D  I  G  T  S  N  R  N  P  S  F  S :   W  M  A  T  V  G  E  K  V  H  N  S  T  V  P  T  S  V  P  V  R  V  A  L  E  L  L  Q  A  G  H  R  Y  L  D  V  R :   T  T  E  E  Y  N  D  G  H  A  A  G  A  I  N  I  P  Y  M  L  R  I  G  S   : G  M  I  K  N  P  N  F  L  E  E  V  L  E  Q  F  G  K  D  D  E  I  I  V  :  G  C  Q  L  G  K  R  S  F  M  A  A  T  E  L  L  A  A  :  G  F  T  G  V  T  D  I  A  G  G  Y  A  A  W  T  E  S  G  L  P  I  E  S  *  R  P  F  I  Y  S  H  I  K  R  V  D  F  *  I  S  T  H  Q  *  S  T  W  R  N  Q  F  P  F  F  T  S  K  I  R  R  S  N  L  Q  N  L  L  Y  S  N  L  *  Q  V  M  M  I  F  D  V  G  E  S  V  L  Q  E  I  C  V  N  I  V  L  L  I  L  L  *  *  I  I  F  A  *  K  A  S  H  L  L  I  T  </second_frame>
            <third_frame>   H  R  N  K  Q  S  *  E  L  F  P  F  I  Q  P  H  F  H  L  L  S  S  M  V  P  R  I  W  H  K   : G  S  I  D  R  F  R  *  F  Q  W  R  G  L  N  F  S  L  K  *  D  V  T  L  V  L  A  I  E  I  Q  V  L   : A  G  W  Q  Q  L  E  R  K  C  T  T  P  R  F  L  L  L  F  L  F  E  L  H  L  N  C  F  K  L  A  I  V  I  *  M  S   : E  L  L  R  S  T  M  M  G  M  L  L  E  P  *  T  F  L  T  C  L  E  L  A  Q  :  G  *  *  R  T  P  I  S  W  R  K  C  W  N  N  S  G  R  M  M  R  L  *  L :   D  A  S  W  V  R  D  H  L  W  L  Q  L  N  F  L  L  L :   D  L  L  G  *  L  T  L  L  V  D  M  L  R  G  Q  R  V  D  F  R  L  S  L  E  G  L  L  F  T  H  I  *  K  G  *  I  F  K  *  V  H  T  S  S  Q  H  G  E  I  N  S  L  S  S  H  Q  K  L  E  G  A  T  C  K  I  S  C  T  V  I  Y  S  R  *  *  *  Y  S  M  W  E  N  L  Y  C  K  K  Y  V  *  I  L  F  S  *  F  C  Y  N  K  *  Y  L  P  E  R  P  L  I  C  S  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52399" stop="52308"/>
                    <exon start="52200" stop="52102"/>
                    <exon start="52015" stop="51905"/>
                    <exon start="51765" stop="51692"/>
                    <exon start="50577" stop="50507"/>
                    <exon start="50399" stop="50346"/>
                    <exon start="50168" stop="50094"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>573</number_coding_nucleotides>
                  <number_encoded_amino_acids>191</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PQEQTIMRTISLHSTSFSLVEFHGTKNLAQRINRSVSLIPMARSQFQPKIRRDIGTSNRNPSFSWMATVGEKVHNSTVPTSVPVRVALELLQAGHRYLDVRTTEEYNDGHAAGAINIPYMLRIGSGMIKNPNFLEEVLEQFGKDDEIIVGCQLGKRSFMAATELLAAGFTGVTDIAGGYAAWTESGLPIES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="50873" e_stop="50689"/>
            <exon e_start="50577" e_stop="50507"/>
            <exon e_start="50399" e_stop="50346"/>
            <exon e_start="50168" e_stop="49848"/>
            <exon e_start="49783" e_stop="49761"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.991" e_score="0.924"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.997"/>
          <exon-only e_score="0.652"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="50873" e_stop="50689" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.991">
            <gDNA_intron_boundary i_start="50688" i_stop="50578" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50577" e_stop="50507" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50399" e_stop="50346" e_length="54"/>
          </exon>
          <intron i_serial="3" don_prob="0.927" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="50168" e_stop="49848" e_length="321"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="49847" i_stop="49784" i_length="64"/>
          </intron>
          <exon e_serial="5" e_score="0.652">
            <gDNA_exon_boundary e_start="49783" e_stop="49761" e_length="23"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50873" stop="50689"/>
              <exon start="50577" stop="50566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50568" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49848"/>
              <exon start="49783" stop="49761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50102" stop="49848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298772" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAA : GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT : GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT : GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAAG : AAATTATAAAGTAAAGAACAAAG</gDNA_template>
            <first_frame> G  *  D  Q  V  *  Y  L  F  L  S  V  *  Y  L  I  C  G  P  L  A  H  T  I  L  T  *  F  F  T  G  K  G  P  L  R  *  L  A  A  W  A  L  A  R  R  P  C  V  A  L  L  H  G  P  G  A  P  H  Q  F  K :   D  D  K  E  P  Q  F  L  G  G  S  V  G  T  I  R  E  G  *  *  D  Y  S   : W  M  P  V  G  *  E  I  I  Y  G  C  N  *  T  S  C  C   : W  I  Y  W  G  D  *  H  C  W  W  I  C  C  V  D  R  E  W  T  S  D  *  V  L  K  A  F  Y  L  L  T  Y  K  K  G  R  F  L  N  K  Y  T  P  V  V  N  M  A  K  S  I  P  F  L  H  I  K  N  *  K  E  Q  L  A  K  S  L  V  Q  *  F  I  A  G  D  D  D  I  R  C  G  R  I  C  I  A  R  N  M  C  K  Y  C  S  P  N  S  A  I  I  N  N  I  C  L  K   : E  I  I  K  *  R  T  K </first_frame>
            <second_frame>  A  K  I  K  C  S  I  C  S  Y  Q  F  N  I  *  Y  V  G  H  W  L  T  R  Y  *  L  N  F  L  R  G  R  V  H  *  G  S  L  L  P  G  L  L  R  V  A  H  A  L  H  C  C  T  G  L  A  H  P  T  N  S   : R  M  I  K  N  P  N  F  L  E  E  V  L  E  Q  F  G  K  D  D  E  I  I  V  :  G  C  Q  L  G  K  R  S  F  M  A  A  T  E  L  L  A  A  :  G  F  T  G  V  T  D  I  A  G  G  Y  A  A  W  T  E  S  G  L  P  I  E  S  *  R  P  F  I  Y  S  H  I  K  R  V  D  F  *  I  S  T  H  Q  *  S  T  W  R  N  Q  F  P  F  F  T  S  K  I  R  R  S  N  L  Q  N  L  L  Y  S  N  L  *  Q  V  M  M  I  F  D  V  G  E  S  V  L  Q  E  I  C  V  N  I  V  L  L  I  L  L  *  *  I  I  F  A  *  K  :  K  L  *  S  K  E  Q   </second_frame>
            <third_frame>   L  R  S  S  V  V  S  V  L  I  S  L  I  S  D  M  W  A  I  G  S  H  D  I  N  L  I  F  Y  G  E  G  S  I  K  V  A  C  C  L  G  S  C  A  S  P  M  R  C  T  A  A  R  A  W  R  T  P  P  I  Q  :  G  *  *  R  T  P  I  S  W  R  K  C  W  N  N  S  G  R  M  M  R  L  *  L :   D  A  S  W  V  R  D  H  L  W  L  Q  L  N  F  L  L  L :   D  L  L  G  *  L  T  L  L  V  D  M  L  R  G  Q  R  V  D  F  R  L  S  L  E  G  L  L  F  T  H  I  *  K  G  *  I  F  K  *  V  H  T  S  S  Q  H  G  E  I  N  S  L  S  S  H  Q  K  L  E  G  A  T  C  K  I  S  C  T  V  I  Y  S  R  *  *  *  Y  S  M  W  E  N  L  Y  C  K  K  Y  V  *  I  L  F  S  *  F  C  Y  N  K  *  Y  L  P  E  R :   N  Y  K  V  K  N  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50767" stop="50689"/>
                    <exon start="50577" stop="50507"/>
                    <exon start="50399" stop="50346"/>
                    <exon start="50168" stop="50094"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSLLPGLLRVAHALHCCTGLAHPTNSRMIKNPNFLEEVLEQFGKDDEIIVGCQLGKRSFMAATELLAAGFTGVTDIAGGYAAWTESGLPIES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="50873" e_stop="50689"/>
            <exon e_start="50577" e_stop="50559"/>
            <exon e_start="50317" e_stop="50278"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.991" e_score="0.934"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.500"/>
          <exon-only e_score="0.600"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="50873" e_stop="50689" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.991">
            <gDNA_intron_boundary i_start="50688" i_stop="50578" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="0.500">
            <gDNA_exon_boundary e_start="50577" e_stop="50559" e_length="19"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="50558" i_stop="50318" i_length="241"/>
          </intron>
          <exon e_serial="3" e_score="0.600">
            <gDNA_exon_boundary e_start="50317" e_stop="50278" e_length="40"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50873" stop="50689"/>
              <exon start="50577" stop="50566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50870" stop="50689"/>
              <exon start="50577" stop="50559"/>
              <exon start="50317" stop="50278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E586977" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGCCATTGGCTCACACGATATTAACTTAATTTTTTACGGGGAAGGGTCCATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTCAA : GGATGATAAAGAACCCCAA : AATAGAAAATTCTTGAAAATGAAAGTATAATATAAATAAA</gDNA_template>
            <first_frame> G  *  D  Q  V  *  Y  L  F  L  S  V  *  Y  L  I  C  G  P  L  A  H  T  I  L  T  *  F  F  T  G  K  G  P  L  R  *  L  A  A  W  A  L  A  R  R  P  C  V  A  L  L  H  G  P  G  A  P  H  Q  F  K :   D  D  K  E  P  Q  :  N  R  K  F  L  K  M  K  V  *  Y  K  *  </first_frame>
            <second_frame>  A  K  I  K  C  S  I  C  S  Y  Q  F  N  I  *  Y  V  G  H  W  L  T  R  Y  *  L  N  F  L  R  G  R  V  H  *  G  S  L  L  P  G  L  L  R  V  A  H  A  L  H  C  C  T  G  L  A  H  P  T  N  S   : R  M  I  K  N  P  K :   I  E  N  S  *  K  *  K  Y  N  I  N  K </second_frame>
            <third_frame>   L  R  S  S  V  V  S  V  L  I  S  L  I  S  D  M  W  A  I  G  S  H  D  I  N  L  I  F  Y  G  E  G  S  I  K  V  A  C  C  L  G  S  C  A  S  P  M  R  C  T  A  A  R  A  W  R  T  P  P  I  Q  :  G  *  *  R  T  P   : K  *  K  I  L  E  N  E  S  I  I  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="51565" e_stop="51480"/>
            <exon e_start="50577" e_stop="50507"/>
            <exon e_start="50399" e_stop="50346"/>
            <exon e_start="50168" e_stop="49849"/>
            <exon e_start="49209" e_stop="49167"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.991" e_score="0.988"/>
          <exon-intron don_prob="0.972" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.171" e_score="1.000"/>
          <exon-only e_score="0.535"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="51565" e_stop="51480" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="51479" i_stop="50578" i_length="902"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50577" e_stop="50507" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.997">
            <gDNA_intron_boundary i_start="50506" i_stop="50400" i_length="107"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50399" e_stop="50346" e_length="54"/>
          </exon>
          <intron i_serial="3" don_prob="0.927" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50345" i_stop="50169" i_length="177"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="50168" e_stop="49849" e_length="320"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.171">
            <gDNA_intron_boundary i_start="49848" i_stop="49210" i_length="639"/>
          </intron>
          <exon e_serial="5" e_score="0.535">
            <gDNA_exon_boundary e_start="49209" e_stop="49167" e_length="43"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51565" stop="51480"/>
              <exon start="50577" stop="50507"/>
              <exon start="50399" stop="50346"/>
              <exon start="50168" stop="49849"/>
              <exon start="49209" stop="49167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721980" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTCATCGAGTTCTCAAAAATTGAAATGGTGGCAATTATTATGCCTGGTTTCTACTTTCTGGGTGTCGAATGTTTACATGTAAAAT : GGATGATAAAGAACCCCAATTTCTTGGAGGAAGTGTTGGAACAATTCGGGAAGGATGATGAGATTATAGTT : GGATGCCAGTTGGGTAAGAGATCATTTATGGCTGCAACTGAACTTCTTGCTGCT : GGATTTACTGGGGTGACTGACATTGCTGGTGGATATGCTGCGTGGACAGAGAGTGGACTTCCGATTGAGTCTTGAAGGCCTTTTATTTACTCACATATAAAAAGGGTAGATTTTTAAATAAGTACACACCAGTAGTCAACATGGCGAAATCAATTCCCTTTCTTCACATCAAAAATTAGAAGGAGCAACTTGCAAAATCTCTTGTACAGTAATTTATAGCAGGTGATGATGATATTCGATGTGGGAGAATCTGTATTGCAAGAAATATGTGTAAATATTGTTCTCCTAATTCTGCTATAATAAATAATATTTGCCTGAAA : GAATCTTAACGAATAACAACCAGATGGAAATGATTAAAAAGAA</gDNA_template>
            <first_frame> C  H  R  V  L  K  N  *  N  G  G  N  Y  Y  A  W  F  L  L  S  G  C  R  M  F  T  C  K  M :   D  D  K  E  P  Q  F  L  G  G  S  V  G  T  I  R  E  G  *  *  D  Y  S   : W  M  P  V  G  *  E  I  I  Y  G  C  N  *  T  S  C  C   : W  I  Y  W  G  D  *  H  C  W  W  I  C  C  V  D  R  E  W  T  S  D  *  V  L  K  A  F  Y  L  L  T  Y  K  K  G  R  F  L  N  K  Y  T  P  V  V  N  M  A  K  S  I  P  F  L  H  I  K  N  *  K  E  Q  L  A  K  S  L  V  Q  *  F  I  A  G  D  D  D  I  R  C  G  R  I  C  I  A  R  N  M  C  K  Y  C  S  P  N  S  A  I  I  N  N  I  C  L  K  :  E  S  *  R  I  T  T  R  W  K  *  L  K  R  </first_frame>
            <second_frame>  V  I  E  F  S  K  I  E  M  V  A  I  I  M  P  G  F  Y  F  L  G  V  E  C  L  H  V  K   : W  M  I  K  N  P  N  F  L  E  E  V  L  E  Q  F  G  K  D  D  E  I  I  V  :  G  C  Q  L  G  K  R  S  F  M  A  A  T  E  L  L  A  A  :  G  F  T  G  V  T  D  I  A  G  G  Y  A  A  W  T  E  S  G  L  P  I  E  S  *  R  P  F  I  Y  S  H  I  K  R  V  D  F  *  I  S  T  H  Q  *  S  T  W  R  N  Q  F  P  F  F  T  S  K  I  R  R  S  N  L  Q  N  L  L  Y  S  N  L  *  Q  V  M  M  I  F  D  V  G  E  S  V  L  Q  E  I  C  V  N  I  V  L  L  I  L  L  *  *  I  I  F  A  *  K :   N  L  N  E  *  Q  P  D  G  N  D  *  K  E </second_frame>
            <third_frame>   S  S  S  S  Q  K  L  K  W  W  Q  L  L  C  L  V  S  T  F  W  V  S  N  V  Y  M  *  N  :  G  *  *  R  T  P  I  S  W  R  K  C  W  N  N  S  G  R  M  M  R  L  *  L :   D  A  S  W  V  R  D  H  L  W  L  Q  L  N  F  L  L  L :   D  L  L  G  *  L  T  L  L  V  D  M  L  R  G  Q  R  V  D  F  R  L  S  L  E  G  L  L  F  T  H  I  *  K  G  *  I  F  K  *  V  H  T  S  S  Q  H  G  E  I  N  S  L  S  S  H  Q  K  L  E  G  A  T  C  K  I  S  C  T  V  I  Y  S  R  *  *  *  Y  S  M  W  E  N  L  Y  C  K  K  Y  V  *  I  L  F  S  *  F  C  Y  N  K  *  Y  L  P  E   : R  I  L  T  N  N  N  Q  M  E  M  I  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51564" stop="51480"/>
                    <exon start="50577" stop="50507"/>
                    <exon start="50399" stop="50346"/>
                    <exon start="50168" stop="50094"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIEFSKIEMVAIIMPGFYFLGVECLHVKWMIKNPNFLEEVLEQFGKDDEIIVGCQLGKRSFMAATELLAAGFTGVTDIAGGYAAWTESGLPIES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="56347" PGL_stop="56163"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56347" e_stop="56163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="56347" e_stop="56163" e_length="185"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56347" stop="56163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612686" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGGTCATTGGCTCACACGATATTAACTCAATTTTTTAAGGGGAAGGGTCTATTAAGGTAGCTTGCTGCCTGGGCTCTTGCGCGTCGCCCATGCGTTGCACTGCTGCACGGGCCTGGCGCACCCCACCAATTTAA</gDNA_template>
            <first_frame> G  *  D  Q  V  *  Y  L  F  L  S  V  *  Y  L  I  C  G  S  L  A  H  T  I  L  T  Q  F  F  K  G  K  G  L  L  R  *  L  A  A  W  A  L  A  R  R  P  C  V  A  L  L  H  G  P  G  A  P  H  Q  F   </first_frame>
            <second_frame>  A  K  I  K  C  S  I  C  S  Y  Q  F  N  I  *  Y  V  G  H  W  L  T  R  Y  *  L  N  F  L  R  G  R  V  Y  *  G  S  L  L  P  G  L  L  R  V  A  H  A  L  H  C  C  T  G  L  A  H  P  T  N  L  </second_frame>
            <third_frame>   L  R  S  S  V  V  S  V  L  I  S  L  I  S  D  M  W  V  I  G  S  H  D  I  N  S  I  F  *  G  E  G  S  I  K  V  A  C  C  L  G  S  C  A  S  P  M  R  C  T  A  A  R  A  W  R  T  P  P  I  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="58074" PGL_stop="63782"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58074" e_stop="58368"/>
            <exon e_start="58453" e_stop="58732"/>
            <exon e_start="60559" e_stop="60815"/>
            <exon e_start="60898" e_stop="61010"/>
            <exon e_start="61402" e_stop="61549"/>
            <exon e_start="62251" e_stop="62388"/>
            <exon e_start="62519" e_stop="62801"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.720" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.874" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58074" e_stop="58368" e_length="295"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58453" e_stop="58732" e_length="280"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.949">
            <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60559" e_stop="60815" e_length="257"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="60816" i_stop="60897" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60898" e_stop="61010" e_length="113"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.986">
            <gDNA_intron_boundary i_start="61011" i_stop="61401" i_length="391"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61402" e_stop="61549" e_length="148"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.720">
            <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62251" e_stop="62388" e_length="138"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.874">
            <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62519" e_stop="62801" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58074" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58131" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58131" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58132" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60815"/>
              <exon start="60898" stop="60909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58132" stop="58368"/>
              <exon start="58453" stop="58726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58136" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58164" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363881" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58170" stop="58368"/>
              <exon start="58453" stop="58732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58173" stop="58368"/>
              <exon start="58453" stop="58725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58174" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58201" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58201" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58201" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58207" stop="58368"/>
              <exon start="58453" stop="58500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58208" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58208" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58211" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58223" stop="58368"/>
              <exon start="58453" stop="58725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58232" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58233" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60815"/>
              <exon start="60898" stop="61010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58279" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58683" stop="58732"/>
              <exon start="60559" stop="60815"/>
              <exon start="60898" stop="61010"/>
              <exon start="61402" stop="61457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60748" stop="60815"/>
              <exon start="60898" stop="61010"/>
              <exon start="61402" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695886" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60775" stop="60815"/>
              <exon start="60898" stop="61010"/>
              <exon start="61402" stop="61545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60907" stop="61010"/>
              <exon start="61402" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60968" stop="61010"/>
              <exon start="61402" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61408" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61459" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412349" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61527" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298314" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCAAAGGCTTACTAAACAGTTTAGCAAAGGATGTTTTGTGTAAAATAAGCCAGAGCCCAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG : AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG : GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAG : GGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGG : TTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAG : ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG : GTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCCACAAT</gDNA_template>
            <first_frame> F  K  G  L  L  N  S  L  A  K  D  V  L  C  K  I  S  Q  S  P  K  F  V  P  V  Q  I  P  V  F  S  N  E  Q  H  F  L  H  F  N  Q  R  P  T  T  T  A  E  L  V  K  P  P  L  L  T  A  G  G  I  Q  F  *  A  D  G  Q  Y  H  R  R  I  I  F  S  F  S  N  P  D  L  S  S  S  S  I  S  L  *  F  H  I  F  S  R  S  T  Q   : E  R  F  G  S  A  T  V  V  A  S  S  E  L  L  I  K  A  G  R  R  C  R  D  R  I  R  I  *  G  G  I  A  R  Y  S  C  *  Y  R  H  F  S  I  Q  L  V  C  S  S  W  W  D  W  V  S  *  D  F  L  L  D  V  P  Q  V  N  *  L  C  S  I  L  S  C  W  *  W  C  Q  L  W  R  H  P  Q  Q  Q  L  L  S  C  I  W :   C  S  S  S  I  N  W  Y  G  C  L  W  S  S  C  N  T  W  D  T  I  G  P  E  K  Q  A  S  W  N  W  *  S  *  W  A  F  G  F  T  W  N  N  Y  F  H  G  S  C  Q  C  I  L  L  V  H  P  K  H  K  V  H  W  G  I  L  S  V  L  F  S  F  C  L  I  V  I  *  F  V  H  Q  Q  Y  E   : G  F  G  L  S  R  G  A  K  R  C  G  Y  T  V  T  Y  S  S  L  G  G  F  Y  P  K  Q  F  I  Q  *  L  S  A  Y  K  H  R  :  F  C  S  G  *  D  G  I  L  Y  S  R  D  H  I  R  V  Y  T  F  C  Y  I  P  S  E  T  P  A  F  N  W  G  K  N  V  W  G  F  L  V  F  S  L  P  G  T  K  A   : D  V  W  T  R  S  S  K  V  T  R  L  C  R  M  L  S  L  W  T  *  E  G  N  F  Y  D  Q  C  M  S  R  S  K  T  R  R  V  P  Y  M  G  Y  Q  W  G   : G  S  *  R  R  E  E  A  F  R  A  G  C  T  V  W  F  R  Y  E  R  R  T  Y  *  G  *  M  S  S  V  D  Q  Q  S  H  T  L  R  I  S  K  F  M  N  S  Y  N  C  P  L  V  F  T  *  F  H  N  V  I  T  F  L  C  *  *  N  *  I  G  S  M  I  K  *  R  I  R  V  D  H  L  L  S  K  Y  I  K  Q  I  L  L  P  T   </first_frame>
            <second_frame>  S  K  A  Y  *  T  V  *  Q  R  M  F  C  V  K  *  A  R  A  Q  N  L  F  R  S  K  S  P  Y  S  V  T  S  N  I  F  C  T  S  T  N  D  Q  Q  P  P  Q  S  *  S  N  H  H  Y  S  R  P  V  V  S  N  S  E  L  M  A  S  I  I  G  V  S  S  S  P  F  P  T  Q  T  S  H  L  L  P  S  R  S  N  S  I  S  S  L  V  Q  L  K  :  R  D  S  V  R  R  L  L  L  L  R  V  N  C  S  S  R  Q  V  G  D  A  E  T  E  S  E  S  K  V  V  L  P  D  T  P  A  D  T  G  I  S  A  Y  N  W  C  A  A  L  G  G  I  G  F  L  E  T  S  Y  L  T  F  L  K  L  T  N  S  A  A  F  C  P  V  G  D  G  A  S  C  G  D  I  L  N  S  S  Y  S  A  V  F   : G  V  P  L  P  L  I  G  M  V  A  Y  G  V  V  A  I  L  G  I  Q  L  G  Q  K  S  R  P  L  G  T  G  E  A  N  G  R  L  V  L  L  G  T  T  T  S  M  A  A  A  S  A  Y  F  L  Y  I  L  S  T  K  F  T  G  E  F  C  P  Y  C  L  A  S  V  L  L  S  F  S  L  F  I  S  S  M  K  :  G  L  G  F  Q  E  V  Q  K  D  V  G  I  Q  L  L  I  V  L  L  V  V  S  T  L  N  N  S  Y  S  D  S  Q  P  T  N  T  G :   S  A  L  A  E  M  E  Y  F  T  A  E  I  T  S  E  S  T  P  F  A  I  S  L  A  K  H  L  H  S  I  G  A  K  M  Y  G  A  F  W  C  S  H  C  Q  E  Q  K  Q  :  M  F  G  R  E  A  A  K  L  L  D  Y  V  E  C  F  P  Y  G  L  K  R  G  I  S  M  I  N  A  C  Q  E  A  K  L  E  G  F  P  T  W  V  I  N  G  E  :  V  L  S  G  E  K  K  L  S  E  L  A  A  L  S  G  F  D  M  K  E  E  L  T  E  A  K  *  A  L  L  I  N  S  H  I  L  L  G  Y  L  S  L  *  I  L  I  T  A  L  W  Y  L  L  S  F  I  M  *  L  P  S  Y  V  S  K  T  E  *  V  V  *  *  S  E  G  S  E  W  I  I  F  *  V  N  I  S  S  K  S  Y  Y  P  Q  </second_frame>
            <third_frame>   Q  R  L  T  K  Q  F  S  K  G  C  F  V  *  N  K  P  E  P  K  I  C  S  G  P  N  P  R  I  Q  *  R  A  T  F  S  A  L  Q  P  T  T  N  N  H  R  R  A  S  Q  T  T  T  T  H  G  R  W  Y  P  I  L  S  *  W  P  V  S  S  A  Y  H  L  L  L  F  Q  P  R  P  L  I  F  F  H  L  A  L  I  P  Y  L  L  S  F  N  S  R :   E  I  R  F  G  D  C  C  C  F  E  *  T  A  H  Q  G  R  S  E  M  Q  R  Q  N  Q  N  L  R  W  Y  C  Q  I  L  L  L  I  Q  A  F  Q  H  T  I  G  V  Q  L  L  V  G  L  G  F  L  R  L  L  T  *  R  S  S  S  *  L  T  L  Q  H  F  V  L  L  V  M  V  P  A  V  A  T  S  S  T  A  A  T  Q  L  Y  L  :  V  F  L  F  H  *  L  V  W  L  L  M  E  *  L  Q  Y  L  G  Y  N  W  A  R  K  A  G  L  L  E  L  V  K  L  M  G  V  W  F  Y  L  E  Q  L  L  P  W  Q  L  P  V  H  T  S  C  T  S  *  A  Q  S  S  L  G  N  F  V  R  T  V  *  L  L  S  Y  C  H  L  V  C  S  S  A  V  *  R :   V  W  A  F  K  R  C  K  K  M  W  V  Y  S  Y  L  *  F  S  W  W  F  L  P  *  T  I  H  T  V  T  L  S  L  Q  T  Q   : V  L  L  W  L  R  W  N  T  L  Q  Q  R  S  H  Q  S  L  H  L  L  L  Y  P  *  R  N  T  C  I  Q  L  G  Q  K  C  M  G  L  S  G  V  L  T  A  R  N  K  S  R :   C  L  D  E  K  Q  Q  S  Y  *  T  M  *  N  A  F  L  M  D  L  R  G  E  F  L  *  S  M  H  V  K  K  Q  N  S  K  G  S  L  H  G  L  S  M  G  R :   F  L  A  E  R  R  S  F  Q  S  W  L  H  C  L  V  S  I  *  K  K  N  L  L  R  L  N  E  L  C  *  S  T  V  T  Y  S  *  D  I  *  V  Y  E  F  L  *  L  P  S  G  I  Y  L  V  S  *  C  N  Y  L  L  M  L  V  K  L  N  R  *  Y  D  K  V  K  D  P  S  G  S  S  S  E  *  I  Y  Q  A  N  P  I  T  H  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58222" stop="58368"/>
                    <exon start="58453" stop="58732"/>
                    <exon start="60559" stop="60815"/>
                    <exon start="60898" stop="61010"/>
                    <exon start="61402" stop="61549"/>
                    <exon start="62251" stop="62388"/>
                    <exon start="62519" stop="62602"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNHHYSRPVVSNSELMASIIGVSSSPFPTQTSHLLPSRSNSISSLVQLKRDSVRRLLLLRVNCSSRQVGDAETESESKVVLPDTPADTGISAYNWCAALGGIGFLETSYLTFLKLTNSAAFCPVGDGASCGDILNSSYSAVFGVPLPLIGMVAYGVVAILGIQLGQKSRPLGTGEANGRLVLLGTTTSMAAASAYFLYILSTKFTGEFCPYCLASVLLSFSLFISSMKGLGFQEVQKDVGIQLLIVLLVVSTLNNSYSDSQPTNTGSALAEMEYFTAEITSESTPFAISLAKHLHSIGAKMYGAFWCSHCQEQKQMFGREAAKLLDYVECFPYGLKRGISMINACQEAKLEGFPTWVINGEVLSGEKKLSELAALSGFDMKEELTEAK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="58074" e_stop="58368"/>
            <exon e_start="58453" e_stop="58732"/>
            <exon e_start="60559" e_stop="60815"/>
            <exon e_start="60898" e_stop="61010"/>
            <exon e_start="61402" e_stop="61549"/>
            <exon e_start="62251" e_stop="62388"/>
            <exon e_start="62519" e_stop="62799"/>
            <exon e_start="63762" e_stop="63782"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.720" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.810"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58074" e_stop="58368" e_length="295"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58453" e_stop="58732" e_length="280"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.949">
            <gDNA_intron_boundary i_start="58733" i_stop="60558" i_length="1826"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60559" e_stop="60815" e_length="257"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="60816" i_stop="60897" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60898" e_stop="61010" e_length="113"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.986">
            <gDNA_intron_boundary i_start="61011" i_stop="61401" i_length="391"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61402" e_stop="61549" e_length="148"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.720">
            <gDNA_intron_boundary i_start="61550" i_stop="62250" i_length="701"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62251" e_stop="62388" e_length="138"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.874">
            <gDNA_intron_boundary i_start="62389" i_stop="62518" i_length="130"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62519" e_stop="62799" e_length="281"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="62800" i_stop="63761" i_length="962"/>
          </intron>
          <exon e_serial="8" e_score="0.810">
            <gDNA_exon_boundary e_start="63762" e_stop="63782" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58074" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58131" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412348" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58131" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58132" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60815"/>
              <exon start="60898" stop="60909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58132" stop="58368"/>
              <exon start="58453" stop="58726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58136" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58164" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363881" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58170" stop="58368"/>
              <exon start="58453" stop="58732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58173" stop="58368"/>
              <exon start="58453" stop="58725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58174" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60803"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58201" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58201" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58201" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58207" stop="58368"/>
              <exon start="58453" stop="58500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58208" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58208" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58211" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58223" stop="58368"/>
              <exon start="58453" stop="58725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58232" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58233" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60815"/>
              <exon start="60898" stop="61010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58279" stop="58368"/>
              <exon start="58453" stop="58732"/>
              <exon start="60559" stop="60619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58683" stop="58732"/>
              <exon start="60559" stop="60815"/>
              <exon start="60898" stop="61010"/>
              <exon start="61402" stop="61457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60775" stop="60815"/>
              <exon start="60898" stop="61010"/>
              <exon start="61402" stop="61545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60907" stop="61010"/>
              <exon start="61402" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339326" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60968" stop="61010"/>
              <exon start="61402" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61408" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61461" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62799"/>
              <exon start="63762" stop="63782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292526" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61527" stop="61549"/>
              <exon start="62251" stop="62388"/>
              <exon start="62519" stop="62799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298314" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCAAAGGCTTACTAAACAGTTTAGCAAAGGATGTTTTGTGTAAAATAAGCCAGAGCCCAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG : AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTG : GTGTTCCTCTTCCATTAATTGGTATGGTTGCTTATGGAGTAGTTGCAATACTTGGGATACAATTGGGCCAGAAAAGCAGGCCTCTTGGAACTGGTGAAGCTAATGGGCGTTTGGTTTTACTTGGAACAACTACTTCCATGGCAGCTGCCAGTGCATACTTCTTGTACATCCTAAGCACAAAGTTCACTGGGGAATTTTGTCCGTACTGTTTAGCTTCTGTCTTATTGTCATTTAGTTTGTTCATCAGCAGTATGAAG : GGTTTGGGCTTTCAAGAGGTGCAAAAAGATGTGGGTATACAGTTACTTATAGTTCTCTTGGTGGTTTCTACCCTAAACAATTCATACAGTGACTCTCAGCCTACAAACACAGG : TTCTGCTCTGGCTGAGATGGAATACTTTACAGCAGAGATCACATCAGAGTCTACACCTTTTGCTATATCCCTAGCGAAACACCTGCATTCAATTGGGGCAAAAATGTATGGGGCTTTCTGGTGTTCTCACTGCCAGGAACAAAAGCAG : ATGTTTGGACGAGAAGCAGCAAAGTTACTAGACTATGTAGAATGCTTTCCTTATGGACTTAAGAGGGGAATTTCTATGATCAATGCATGTCAAGAAGCAAAACTCGAAGGGTTCCCTACATGGGTTATCAATGGGGAG : GTTCTTAGCGGAGAGAAGAAGCTTTCAGAGCTGGCTGCACTGTCTGGTTTCGATATGAAAGAAGAACTTACTGAGGCTAAATGAGCTCTGTTGATCAACAGTCACATACTCTTAGGATATCTAAGTTTATGAATTCTTATAACTGCCCTCTGGTATTTACTTAGTTTCATAATGTAATTACCTTCTTATGTTAGTAAAACTGAATAGGTAGTATGATAAAGTGAAGGATCCGAGTGGATCATCTTCTGAGTAAATATATCAAGCAAATCCTATTACCCACA : AAAAGAAAAAATAAATAAAAA</gDNA_template>
            <first_frame> F  K  G  L  L  N  S  L  A  K  D  V  L  C  K  I  S  Q  S  P  K  F  V  P  V  Q  I  P  V  F  S  N  E  Q  H  F  L  H  F  N  Q  R  P  T  T  T  A  E  L  V  K  P  P  L  L  T  A  G  G  I  Q  F  *  A  D  G  Q  Y  H  R  R  I  I  F  S  F  S  N  P  D  L  S  S  S  S  I  S  L  *  F  H  I  F  S  R  S  T  Q   : E  R  F  G  S  A  T  V  V  A  S  S  E  L  L  I  K  A  G  R  R  C  R  D  R  I  R  I  *  G  G  I  A  R  Y  S  C  *  Y  R  H  F  S  I  Q  L  V  C  S  S  W  W  D  W  V  S  *  D  F  L  L  D  V  P  Q  V  N  *  L  C  S  I  L  S  C  W  *  W  C  Q  L  W  R  H  P  Q  Q  Q  L  L  S  C  I  W :   C  S  S  S  I  N  W  Y  G  C  L  W  S  S  C  N  T  W  D  T  I  G  P  E  K  Q  A  S  W  N  W  *  S  *  W  A  F  G  F  T  W  N  N  Y  F  H  G  S  C  Q  C  I  L  L  V  H  P  K  H  K  V  H  W  G  I  L  S  V  L  F  S  F  C  L  I  V  I  *  F  V  H  Q  Q  Y  E   : G  F  G  L  S  R  G  A  K  R  C  G  Y  T  V  T  Y  S  S  L  G  G  F  Y  P  K  Q  F  I  Q  *  L  S  A  Y  K  H  R  :  F  C  S  G  *  D  G  I  L  Y  S  R  D  H  I  R  V  Y  T  F  C  Y  I  P  S  E  T  P  A  F  N  W  G  K  N  V  W  G  F  L  V  F  S  L  P  G  T  K  A   : D  V  W  T  R  S  S  K  V  T  R  L  C  R  M  L  S  L  W  T  *  E  G  N  F  Y  D  Q  C  M  S  R  S  K  T  R  R  V  P  Y  M  G  Y  Q  W  G   : G  S  *  R  R  E  E  A  F  R  A  G  C  T  V  W  F  R  Y  E  R  R  T  Y  *  G  *  M  S  S  V  D  Q  Q  S  H  T  L  R  I  S  K  F  M  N  S  Y  N  C  P  L  V  F  T  *  F  H  N  V  I  T  F  L  C  *  *  N  *  I  G  S  M  I  K  *  R  I  R  V  D  H  L  L  S  K  Y  I  K  Q  I  L  L  P  T  :  K  R  K  N  K  *  K </first_frame>
            <second_frame>  S  K  A  Y  *  T  V  *  Q  R  M  F  C  V  K  *  A  R  A  Q  N  L  F  R  S  K  S  P  Y  S  V  T  S  N  I  F  C  T  S  T  N  D  Q  Q  P  P  Q  S  *  S  N  H  H  Y  S  R  P  V  V  S  N  S  E  L  M  A  S  I  I  G  V  S  S  S  P  F  P  T  Q  T  S  H  L  L  P  S  R  S  N  S  I  S  S  L  V  Q  L  K  :  R  D  S  V  R  R  L  L  L  L  R  V  N  C  S  S  R  Q  V  G  D  A  E  T  E  S  E  S  K  V  V  L  P  D  T  P  A  D  T  G  I  S  A  Y  N  W  C  A  A  L  G  G  I  G  F  L  E  T  S  Y  L  T  F  L  K  L  T  N  S  A  A  F  C  P  V  G  D  G  A  S  C  G  D  I  L  N  S  S  Y  S  A  V  F   : G  V  P  L  P  L  I  G  M  V  A  Y  G  V  V  A  I  L  G  I  Q  L  G  Q  K  S  R  P  L  G  T  G  E  A  N  G  R  L  V  L  L  G  T  T  T  S  M  A  A  A  S  A  Y  F  L  Y  I  L  S  T  K  F  T  G  E  F  C  P  Y  C  L  A  S  V  L  L  S  F  S  L  F  I  S  S  M  K  :  G  L  G  F  Q  E  V  Q  K  D  V  G  I  Q  L  L  I  V  L  L  V  V  S  T  L  N  N  S  Y  S  D  S  Q  P  T  N  T  G :   S  A  L  A  E  M  E  Y  F  T  A  E  I  T  S  E  S  T  P  F  A  I  S  L  A  K  H  L  H  S  I  G  A  K  M  Y  G  A  F  W  C  S  H  C  Q  E  Q  K  Q  :  M  F  G  R  E  A  A  K  L  L  D  Y  V  E  C  F  P  Y  G  L  K  R  G  I  S  M  I  N  A  C  Q  E  A  K  L  E  G  F  P  T  W  V  I  N  G  E  :  V  L  S  G  E  K  K  L  S  E  L  A  A  L  S  G  F  D  M  K  E  E  L  T  E  A  K  *  A  L  L  I  N  S  H  I  L  L  G  Y  L  S  L  *  I  L  I  T  A  L  W  Y  L  L  S  F  I  M  *  L  P  S  Y  V  S  K  T  E  *  V  V  *  *  S  E  G  S  E  W  I  I  F  *  V  N  I  S  S  K  S  Y  Y  P  Q :   K  E  K  I  N  K   </second_frame>
            <third_frame>   Q  R  L  T  K  Q  F  S  K  G  C  F  V  *  N  K  P  E  P  K  I  C  S  G  P  N  P  R  I  Q  *  R  A  T  F  S  A  L  Q  P  T  T  N  N  H  R  R  A  S  Q  T  T  T  T  H  G  R  W  Y  P  I  L  S  *  W  P  V  S  S  A  Y  H  L  L  L  F  Q  P  R  P  L  I  F  F  H  L  A  L  I  P  Y  L  L  S  F  N  S  R :   E  I  R  F  G  D  C  C  C  F  E  *  T  A  H  Q  G  R  S  E  M  Q  R  Q  N  Q  N  L  R  W  Y  C  Q  I  L  L  L  I  Q  A  F  Q  H  T  I  G  V  Q  L  L  V  G  L  G  F  L  R  L  L  T  *  R  S  S  S  *  L  T  L  Q  H  F  V  L  L  V  M  V  P  A  V  A  T  S  S  T  A  A  T  Q  L  Y  L  :  V  F  L  F  H  *  L  V  W  L  L  M  E  *  L  Q  Y  L  G  Y  N  W  A  R  K  A  G  L  L  E  L  V  K  L  M  G  V  W  F  Y  L  E  Q  L  L  P  W  Q  L  P  V  H  T  S  C  T  S  *  A  Q  S  S  L  G  N  F  V  R  T  V  *  L  L  S  Y  C  H  L  V  C  S  S  A  V  *  R :   V  W  A  F  K  R  C  K  K  M  W  V  Y  S  Y  L  *  F  S  W  W  F  L  P  *  T  I  H  T  V  T  L  S  L  Q  T  Q   : V  L  L  W  L  R  W  N  T  L  Q  Q  R  S  H  Q  S  L  H  L  L  L  Y  P  *  R  N  T  C  I  Q  L  G  Q  K  C  M  G  L  S  G  V  L  T  A  R  N  K  S  R :   C  L  D  E  K  Q  Q  S  Y  *  T  M  *  N  A  F  L  M  D  L  R  G  E  F  L  *  S  M  H  V  K  K  Q  N  S  K  G  S  L  H  G  L  S  M  G  R :   F  L  A  E  R  R  S  F  Q  S  W  L  H  C  L  V  S  I  *  K  K  N  L  L  R  L  N  E  L  C  *  S  T  V  T  Y  S  *  D  I  *  V  Y  E  F  L  *  L  P  S  G  I  Y  L  V  S  *  C  N  Y  L  L  M  L  V  K  L  N  R  *  Y  D  K  V  K  D  P  S  G  S  S  S  E  *  I  Y  Q  A  N  P  I  T  H   : K  K  K  K  *  I  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58222" stop="58368"/>
                    <exon start="58453" stop="58732"/>
                    <exon start="60559" stop="60815"/>
                    <exon start="60898" stop="61010"/>
                    <exon start="61402" stop="61549"/>
                    <exon start="62251" stop="62388"/>
                    <exon start="62519" stop="62602"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNHHYSRPVVSNSELMASIIGVSSSPFPTQTSHLLPSRSNSISSLVQLKRDSVRRLLLLRVNCSSRQVGDAETESESKVVLPDTPADTGISAYNWCAALGGIGFLETSYLTFLKLTNSAAFCPVGDGASCGDILNSSYSAVFGVPLPLIGMVAYGVVAILGIQLGQKSRPLGTGEANGRLVLLGTTTSMAAASAYFLYILSTKFTGEFCPYCLASVLLSFSLFISSMKGLGFQEVQKDVGIQLLIVLLVVSTLNNSYSDSQPTNTGSALAEMEYFTAEITSESTPFAISLAKHLHSIGAKMYGAFWCSHCQEQKQMFGREAAKLLDYVECFPYGLKRGISMINACQEAKLEGFPTWVINGEVLSGEKKLSELAALSGFDMKEELTEAK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="58132" e_stop="58368"/>
            <exon e_start="58453" e_stop="59031"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.996"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="58132" e_stop="58368" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="58369" i_stop="58452" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="58453" e_stop="59031" e_length="579"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58132" stop="58368"/>
              <exon start="58453" stop="58726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58166" stop="58368"/>
              <exon start="58453" stop="59031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58170" stop="58368"/>
              <exon start="58453" stop="58732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58173" stop="58368"/>
              <exon start="58453" stop="58725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413898" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58177" stop="58368"/>
              <exon start="58453" stop="58540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58207" stop="58368"/>
              <exon start="58453" stop="58500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58223" stop="58368"/>
              <exon start="58453" stop="58725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206506" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAATTTGTTCCGGTCCAAATCCCCGTATTCAGTAACGAGCAACATTTTCTGCACTTCAACCAACGACCAACAACCACCGCAGAGCTAGTCAAACCACCACTACTCACGGCCGGTGGTATCCAATTCTGAGCTGATGGCCAGTATCATCGGCGTATCATCTTCTCCTTTTCCAACCCAGACCTCTCATCTTCTTCCATCTCGCTCTAATTCCATATCTTCTCTCGTTCAACTCAAG : AGAGATTCGGTTCGGCGACTGTTGTTGCTTCGAGTGAACTGCTCATCAAGGCAGGTCGGAGATGCAGAGACAGAATCAGAATCTAAGGTGGTATTGCCAGATACTCCTGCTGATACAGGCATTTCAGCATACAATTGGTGTGCAGCTCTTGGTGGGATTGGGTTTCTTGAGACTTCTTACTTGACGTTCCTCAAGTTAACTAACTCTGCAGCATTTTGTCCTGTTGGTGATGGTGCCAGCTGTGGCGACATCCTCAACAGCAGCTACTCAGCTGTATTTGGTAATATCCCGTGCTATTTTTAGGAAATCTGGACTTTAAAAGAACTTTCTGCTTTAGGACTATCTTTGTAACCTTCTATAAGTATATATCTAAAATTTTTGTTTAAAAGAATAATATGAAGATATTAACACATCTGTACAAGTAAAATTGGTGGGAACCTGAAGAAGTGATTGGATACAATTTCTATTTTAGGGTTTTGGCAAAGTCTAACCAATTCACGTCTCTCTTTTATGACTAGCCTCTTGTTTGATTCTCTTTATGAATTATGTACGTACCAGACATAATAATCTTTATCCCTA</gDNA_template>
            <first_frame> Q  N  L  F  R  S  K  S  P  Y  S  V  T  S  N  I  F  C  T  S  T  N  D  Q  Q  P  P  Q  S  *  S  N  H  H  Y  S  R  P  V  V  S  N  S  E  L  M  A  S  I  I  G  V  S  S  S  P  F  P  T  Q  T  S  H  L  L  P  S  R  S  N  S  I  S  S  L  V  Q  L  K  :  R  D  S  V  R  R  L  L  L  L  R  V  N  C  S  S  R  Q  V  G  D  A  E  T  E  S  E  S  K  V  V  L  P  D  T  P  A  D  T  G  I  S  A  Y  N  W  C  A  A  L  G  G  I  G  F  L  E  T  S  Y  L  T  F  L  K  L  T  N  S  A  A  F  C  P  V  G  D  G  A  S  C  G  D  I  L  N  S  S  Y  S  A  V  F  G  N  I  P  C  Y  F  *  E  I  W  T  L  K  E  L  S  A  L  G  L  S  L  *  P  S  I  S  I  Y  L  K  F  L  F  K  R  I  I  *  R  Y  *  H  I  C  T  S  K  I  G  G  N  L  K  K  *  L  D  T  I  S  I  L  G  F  W  Q  S  L  T  N  S  R  L  S  F  M  T  S  L  L  F  D  S  L  Y  E  L  C  T  Y  Q  T  *  *  S  L  S  L </first_frame>
            <second_frame>  K  I  C  S  G  P  N  P  R  I  Q  *  R  A  T  F  S  A  L  Q  P  T  T  N  N  H  R  R  A  S  Q  T  T  T  T  H  G  R  W  Y  P  I  L  S  *  W  P  V  S  S  A  Y  H  L  L  L  F  Q  P  R  P  L  I  F  F  H  L  A  L  I  P  Y  L  L  S  F  N  S  R :   E  I  R  F  G  D  C  C  C  F  E  *  T  A  H  Q  G  R  S  E  M  Q  R  Q  N  Q  N  L  R  W  Y  C  Q  I  L  L  L  I  Q  A  F  Q  H  T  I  G  V  Q  L  L  V  G  L  G  F  L  R  L  L  T  *  R  S  S  S  *  L  T  L  Q  H  F  V  L  L  V  M  V  P  A  V  A  T  S  S  T  A  A  T  Q  L  Y  L  V  I  S  R  A  I  F  R  K  S  G  L  *  K  N  F  L  L  *  D  Y  L  C  N  L  L  *  V  Y  I  *  N  F  C  L  K  E  *  Y  E  D  I  N  T  S  V  Q  V  K  L  V  G  T  *  R  S  D  W  I  Q  F  L  F  *  G  F  G  K  V  *  P  I  H  V  S  L  L  *  L  A  S  C  L  I  L  F  M  N  Y  V  R  T  R  H  N  N  L  Y  P   </second_frame>
            <third_frame>   K  F  V  P  V  Q  I  P  V  F  S  N  E  Q  H  F  L  H  F  N  Q  R  P  T  T  T  A  E  L  V  K  P  P  L  L  T  A  G  G  I  Q  F  *  A  D  G  Q  Y  H  R  R  I  I  F  S  F  S  N  P  D  L  S  S  S  S  I  S  L  *  F  H  I  F  S  R  S  T  Q   : E  R  F  G  S  A  T  V  V  A  S  S  E  L  L  I  K  A  G  R  R  C  R  D  R  I  R  I  *  G  G  I  A  R  Y  S  C  *  Y  R  H  F  S  I  Q  L  V  C  S  S  W  W  D  W  V  S  *  D  F  L  L  D  V  P  Q  V  N  *  L  C  S  I  L  S  C  W  *  W  C  Q  L  W  R  H  P  Q  Q  Q  L  L  S  C  I  W  *  Y  P  V  L  F  L  G  N  L  D  F  K  R  T  F  C  F  R  T  I  F  V  T  F  Y  K  Y  I  S  K  I  F  V  *  K  N  N  M  K  I  L  T  H  L  Y  K  *  N  W  W  E  P  E  E  V  I  G  Y  N  F  Y  F  R  V  L  A  K  S  N  Q  F  T  S  L  F  Y  D  *  P  L  V  *  F  S  L  *  I  M  Y  V  P  D  I  I  I  F  I  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58222" stop="58368"/>
                    <exon start="58453" stop="58755"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>447</number_coding_nucleotides>
                  <number_encoded_amino_acids>149</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNHHYSRPVVSNSELMASIIGVSSSPFPTQTSHLLPSRSNSISSLVQLKRDSVRRLLLLRVNCSSRQVGDAETESESKVVLPDTPADTGISAYNWCAALGGIGFLETSYLTFLKLTNSAAFCPVGDGASCGDILNSSYSAVFGNIPCYF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="63794" PGL_stop="66790"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63794" e_stop="64099"/>
            <exon e_start="64663" e_stop="64845"/>
            <exon e_start="65562" e_stop="66109"/>
            <exon e_start="66205" e_stop="66790"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.085" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.912" acc_prob="0.414" e_score="0.996"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63794" e_stop="64099" e_length="306"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.085">
            <gDNA_intron_boundary i_start="64100" i_stop="64662" i_length="563"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64663" e_stop="64845" e_length="183"/>
          </exon>
          <intron i_serial="2" don_prob="0.948" acc_prob="0.979">
            <gDNA_intron_boundary i_start="64846" i_stop="65561" i_length="716"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="65562" e_stop="66109" e_length="548"/>
          </exon>
          <intron i_serial="3" don_prob="0.912" acc_prob="0.414">
            <gDNA_intron_boundary i_start="66110" i_stop="66204" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="66205" e_stop="66790" e_length="586"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63794" stop="64099"/>
              <exon start="64663" stop="64845"/>
              <exon start="65562" stop="65697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63794" stop="64099"/>
              <exon start="64663" stop="64790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63810" stop="64099"/>
              <exon start="64663" stop="64845"/>
              <exon start="65562" stop="65645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63831" stop="64099"/>
              <exon start="64663" stop="64845"/>
              <exon start="65562" stop="66011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63867" stop="64099"/>
              <exon start="64663" stop="64845"/>
              <exon start="65562" stop="65600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63961" stop="64099"/>
              <exon start="64663" stop="64837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65810" stop="66109"/>
              <exon start="66205" stop="66393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254224" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66344" stop="66790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390517" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGTTTTGGGTATTGAGCGATCAGTTCCTGAATGATGGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG : ATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATG : GTCGTTTAGTACAAGCTGCATTTTGGTATGGGCTTGTCGTCCACATGAGGATCTATCCAATAATTTATGCTCTTCCAATCATTTTAGTTCTTGATCCCTTGTTCTTCCAGTATGGTACAAAACCTGCTCTTGTGAATTGGAGTTCTAGAAAAAGTAAGTCACAGCAGACTTCCAGCTGTAAAAAGCTTATGGATCCTTGTTGTATGTGCAACTTTTTAACAAGCCTTTTTACCTGGAGGAGGATAATGTTTGGGCTTATTTCTGGAGCTTTGTTCTTTCTCCTTACTGGGATTTTCTTCTTTTTATATGGCTGCGATTTCTTGCATGAAGCACTGCTCTATCATCTCACACGTACAGACCCTAGGCACAATTTCTCAATTTATTTCTACCATATATATCTGCACTATGAACATGAGTTATCTATCTTGGAAAAGCTCGTCTCGTTTCTGCCTCAGATTATGGTGCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAG : GTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGCATTTGGTATAAGTTTAATTCAGTTAACCTCTC</gDNA_template>
            <first_frame> V  V  L  G  I  E  R  S  V  P  E  *  W  *  L  *  I  *  S  R  C  *  Y  S  Q  P  F  L  G  C  F  *  *  S  M  E  N  G  K  I  P  I  W  R  F  D  T  Q  M  W  T  I  L  F  S  Q  M  Q  L  L  *  L  L  P  E  N  P  L  I  K  D  L  H  I  V  T  L  P  *  L  L  F  F  L  C  P  I  L  S  F  I  L  L  G  E  S  L  S  S  P  L  Q  :  I  F  S  W  D  F  L  S  T  P  F  *  S  *  E  G  C  L  R  N  Y  A  P  I  R  *  W  Y  G  F  *  I  H  L  P  L  P  L  E  L  V  G  I  V  S  P  S  S  V  P  *  S  F  G  L  F  Y  V  *  *  M  :  V  V  *  Y  K  L  H  F  G  M  G  L  S  S  T  *  G  S  I  Q  *  F  M  L  F  Q  S  F  *  F  L  I  P  C  S  S  S  M  V  Q  N  L  L  L  *  I  G  V  L  E  K  V  S  H  S  R  L  P  A  V  K  S  L  W  I  L  V  V  C  A  T  F  *  Q  A  F  L  P  G  G  G  *  C  L  G  L  F  L  E  L  C  S  F  S  L  L  G  F  S  S  F  Y  M  A  A  I  S  C  M  K  H  C  S  I  I  S  H  V  Q  T  L  G  T  I  S  Q  F  I  S  T  I  Y  I  C  T  M  N  M  S  Y  L  S  W  K  S  S  S  R  F  C  L  R  L  W  C  S  *  F  L  F  S  A  L  H  K  I  F  H  F  A  S  L  C  R  L  W  H  L  S  H  L  T  R :   L  *  L  L  N  T  L  F  G  S  S  V  S  C  H  *  S  C  H  G  P  T  *  S  S  E  E  K  D  W  S  A  S  C  C  G  W  Q  L  R  V  T  G  Y  C  G  V  I  C  L  N  L  K  E  R  M  S  F  F  N  S  G  W  Q  V  C  C  S  W  L  Q  I  L  S  F  L  S  I  L  F  S  N  T  H  I  V  P  S  S  N  S  H  L  V  P  L  Q  R  N  K  S  N  R  D  E  E  S  D  H  I  P  P  N  S  L  G  E  E  F  S  S  *  *  C  I  *  P  Y  S  V  L  V  E  P  F  I  I  R  Q  S  T  W  L  I  H  S  S  M  L  K  N  T  F  T  K  D  V  A  R  D  R  Y  F  E  V  L  V  V  L  L  L  E  H  T  E  *  *  Q  F  T  I  C  L  L  H  L  V  *  V  *  F  S  *  P  L </first_frame>
            <second_frame>  L  F  W  V  L  S  D  Q  F  L  N  D  G  D  C  K  S  E  V  A  A  D  I  L  S  L  S  *  G  V  F  D  N  L  W  R  M  A  R  Y  P  Y  G  G  S  I  H  R  C  G  L  S  C  F  L  R  C  S  C  F  S  C  C  R  K  I  P  L  S  K  I  Y  I  S  L  L  S  L  D  C  F  S  S  C  A  Q  F  F  R  S  S  F  L  G  K  V  Y  L  L  R  F  R :   S  S  R  G  I  S  Y  Q  R  H  S  K  A  K  R  G  A  *  E  I  M  H  L  F  G  D  G  M  A  F  E  S  I  Y  L  Y  H  W  N  S  W  E  L  *  A  H  H  L  C  H  N  P  L  D  Y  S  M  S  N  E  W :   S  F  S  T  S  C  I  L  V  W  A  C  R  P  H  E  D  L  S  N  N  L  C  S  S  N  H  F  S  S  *  S  L  V  L  P  V  W  Y  K  T  C  S  C  E  L  E  F  *  K  K  *  V  T  A  D  F  Q  L  *  K  A  Y  G  S  L  L  Y  V  Q  L  F  N  K  P  F  Y  L  E  E  D  N  V  W  A  Y  F  W  S  F  V  L  S  P  Y  W  D  F  L  L  F  I  W  L  R  F  L  A  *  S  T  A  L  S  S  H  T  Y  R  P  *  A  Q  F  L  N  L  F  L  P  Y  I  S  A  L  *  T  *  V  I  Y  L  G  K  A  R  L  V  S  A  S  D  Y  G  A  A  S  S  C  F  P  L  C  T  R  F  S  I  L  L  L  C  A  D  C  G  I  C  R  I  *  Q   : G  Y  D  C  S  I  L  C  L  V  L  L  S  L  A  T  N  P  A  M  D  Q  H  E  A  R  R  K  R  T  G  L  H  L  V  V  D  G  S  S  G  S  L  V  I  V  G  L  F  A  *  I  *  R  K  E  C  L  S  S  T  L  G  G  R  F  A  V  L  G  C  K  Y  F  R  S  Y  Q  Y  Y  S  A  T  H  I  *  S  R  L  P  T  V  I  S  C  L  F  K  E  T  S  Q  T  E  M  R  N  Q  I  I  Y  L  L  I  H  W  G  R  N  F  R  A  S  S  V  F  S  H  I  R  Y  L  *  S  L  S  S  S  G  K  A  L  G  L  F  I  A  P  C  L  K  I  P  S  L  K  M  *  Q  E  I  V  I  L  K  F  W  S  F  C  F  *  S  I  R  N  D  S  N  L  Q  F  V  C  C  I  W  Y  K  F  N  S  V  N  L   </second_frame>
            <third_frame>   C  F  G  Y  *  A  I  S  S  *  M  M  V  T  V  N  L  K  S  L  L  I  F  S  A  F  L  R  V  F  L  I  I  Y  G  E  W  Q  D  T  H  M  E  V  R  Y  T  D  V  D  Y  L  V  F  S  D  A  A  A  L  V  A  A  G  K  S  P  Y  Q  R  S  T  Y  R  Y  S  P  L  I  A  F  L  L  V  P  N  S  F  V  H  P  S  W  G  K  F  I  F  S  A  S   : D  L  L  V  G  F  L  I  N  A  I  L  K  L  R  G  V  P  E  K  L  C  T  Y  S  V  M  V  W  L  L  N  P  F  T  F  T  I  G  T  R  G  N  C  E  P  I  I  C  A  I  I  L  W  I  I  L  C  L  M  N   : G  R  L  V  Q  A  A  F  W  Y  G  L  V  V  H  M  R  I  Y  P  I  I  Y  A  L  P  I  I  L  V  L  D  P  L  F  F  Q  Y  G  T  K  P  A  L  V  N  W  S  S  R  K  S  K  S  Q  Q  T  S  S  C  K  K  L  M  D  P  C  C  M  C  N  F  L  T  S  L  F  T  W  R  R  I  M  F  G  L  I  S  G  A  L  F  F  L  L  T  G  I  F  F  F  L  Y  G  C  D  F  L  H  E  A  L  L  Y  H  L  T  R  T  D  P  R  H  N  F  S  I  Y  F  Y  H  I  Y  L  H  Y  E  H  E  L  S  I  L  E  K  L  V  S  F  L  P  Q  I  M  V  Q  L  V  L  V  F  R  F  A  Q  D  F  P  F  C  F  F  V  Q  T  V  A  F  V  A  F  N  K  :  V  M  T  A  Q  Y  F  V  W  F  F  C  L  L  P  L  I  L  P  W  T  N  M  K  L  G  G  K  G  L  V  C  I  L  L  W  M  A  A  Q  G  H  W  L  L  W  G  Y  L  L  E  F  K  G  K  N  V  F  L  Q  L  W  V  A  G  L  L  F  L  A  A  N  T  F  V  L  I  N  I  I  Q  Q  H  T  Y  S  P  V  F  Q  Q  S  S  R  A  S  S  K  K  Q  V  K  Q  R  *  G  I  R  S  Y  T  S  *  F  T  G  G  G  I  F  E  L  V  V  Y  L  A  I  F  G  T  C  R  A  F  H  H  Q  A  K  H  L  A  Y  S  *  L  H  A  *  K  Y  L  H  *  R  C  S  K  R  S  L  F  *  S  F  G  R  F  A  F  R  A  Y  G  M  I  A  I  Y  N  L  F  V  A  F  G  I  S  L  I  Q  L  T  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63826" stop="64099"/>
                    <exon start="64663" stop="64845"/>
                    <exon start="65562" stop="66109"/>
                    <exon start="66205" stop="66519"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1317</number_coding_nucleotides>
                  <number_encoded_amino_acids>439</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MMVTVNLKSLLIFSAFLRVFLIIYGEWQDTHMEVRYTDVDYLVFSDAAALVAAGKSPYQRSTYRYSPLIAFLLVPNSFVHPSWGKFIFSASDLLVGFLINAILKLRGVPEKLCTYSVMVWLLNPFTFTIGTRGNCEPIICAIILWIILCLMNGRLVQAAFWYGLVVHMRIYPIIYALPIILVLDPLFFQYGTKPALVNWSSRKSKSQQTSSCKKLMDPCCMCNFLTSLFTWRRIMFGLISGALFFLLTGIFFFLYGCDFLHEALLYHLTRTDPRHNFSIYFYHIYLHYEHELSILEKLVSFLPQIMVQLVLVFRFAQDFPFCFFVQTVAFVAFNKVMTAQYFVWFFCLLPLILPWTNMKLGGKGLVCILLWMAAQGHWLLWGYLLEFKGKNVFLQLWVAGLLFLAANTFVLINIIQQHTYSPVFQQSSRASSKKQVKQR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="63831" e_stop="64099"/>
            <exon e_start="64625" e_stop="65043"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.981" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="63831" e_stop="64099" e_length="269"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.981">
            <gDNA_intron_boundary i_start="64100" i_stop="64624" i_length="525"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64625" e_stop="65043" e_length="419"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63831" stop="64099"/>
              <exon start="64625" stop="65043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63832" stop="64099"/>
              <exon start="64625" stop="64970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63833" stop="64099"/>
              <exon start="64625" stop="64789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200948" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTGACTGTAAATCTGAAGTCGCTGCTGATATTCTCAGCCTTTCTTAGGGTGTTTTTGATAATCTATGGAGAATGGCAAGATACCCATATGGAGGTTCGATACACAGATGTGGACTATCTTGTTTTCTCAGATGCAGCTGCTTTAGTTGCTGCCGGAAAATCCCCTTATCAAAGATCTACATATCGTTACTCTCCCTTGATTGCTTTTCTTCTTGTGCCCAATTCTTTCGTTCATCCTTCTTGGGGAAAGTTTATCTTCTCCGCTTCAG : ATATGCTTAATGAAACTTACATTGAGTTCGTGCGGCAGATCTTCTCGTGGGATTTCTTATCAACGCCATTCTAAAGCTAAGAGGGGTGCCTGAGAAATTATGCACCTATTCGGTGATGGTATGGCTTTTGAATCCATTTACCTTTACCATTGGAACTCGTGGGAATTGTGAGCCCATCATCTGTGCCATAATCCTTTGGATTATTCTATGTCTAATGAATGGTAAAACTTTCAGTACCTTCTAATTACATTTAATATAGTTATATTGAGAACTTACTCCTAAATTTTTCTTTTTCAATGTATAGTTTATTTCCCTACTGCTATTTTCTCTGTTATTATCTCTTTCAAAATGGTTCCTGTCTCCTTAATCTACCTTACAATATTATTGGGGGTAATGTAAATGACTGTAAAGAGGGGGGC</gDNA_template>
            <first_frame> G  D  C  K  S  E  V  A  A  D  I  L  S  L  S  *  G  V  F  D  N  L  W  R  M  A  R  Y  P  Y  G  G  S  I  H  R  C  G  L  S  C  F  L  R  C  S  C  F  S  C  C  R  K  I  P  L  S  K  I  Y  I  S  L  L  S  L  D  C  F  S  S  C  A  Q  F  F  R  S  S  F  L  G  K  V  Y  L  L  R  F  R :   Y  A  *  *  N  L  H  *  V  R  A  A  D  L  L  V  G  F  L  I  N  A  I  L  K  L  R  G  V  P  E  K  L  C  T  Y  S  V  M  V  W  L  L  N  P  F  T  F  T  I  G  T  R  G  N  C  E  P  I  I  C  A  I  I  L  W  I  I  L  C  L  M  N  G  K  T  F  S  T  F  *  L  H  L  I  *  L  Y  *  E  L  T  P  K  F  F  F  F  N  V  *  F  I  S  L  L  L  F  S  L  L  L  S  L  S  K  W  F  L  S  P  *  S  T  L  Q  Y  Y  W  G  *  C  K  *  L  *  R  G  G  </first_frame>
            <second_frame>  V  T  V  N  L  K  S  L  L  I  F  S  A  F  L  R  V  F  L  I  I  Y  G  E  W  Q  D  T  H  M  E  V  R  Y  T  D  V  D  Y  L  V  F  S  D  A  A  A  L  V  A  A  G  K  S  P  Y  Q  R  S  T  Y  R  Y  S  P  L  I  A  F  L  L  V  P  N  S  F  V  H  P  S  W  G  K  F  I  F  S  A  S   : D  M  L  N  E  T  Y  I  E  F  V  R  Q  I  F  S  W  D  F  L  S  T  P  F  *  S  *  E  G  C  L  R  N  Y  A  P  I  R  *  W  Y  G  F  *  I  H  L  P  L  P  L  E  L  V  G  I  V  S  P  S  S  V  P  *  S  F  G  L  F  Y  V  *  *  M  V  K  L  S  V  P  S  N  Y  I  *  Y  S  Y  I  E  N  L  L  L  N  F  S  F  S  M  Y  S  L  F  P  Y  C  Y  F  L  C  Y  Y  L  F  Q  N  G  S  C  L  L  N  L  P  Y  N  I  I  G  G  N  V  N  D  C  K  E  G  G </second_frame>
            <third_frame>   *  L  *  I  *  S  R  C  *  Y  S  Q  P  F  L  G  C  F  *  *  S  M  E  N  G  K  I  P  I  W  R  F  D  T  Q  M  W  T  I  L  F  S  Q  M  Q  L  L  *  L  L  P  E  N  P  L  I  K  D  L  H  I  V  T  L  P  *  L  L  F  F  L  C  P  I  L  S  F  I  L  L  G  E  S  L  S  S  P  L  Q  :  I  C  L  M  K  L  T  L  S  S  C  G  R  S  S  R  G  I  S  Y  Q  R  H  S  K  A  K  R  G  A  *  E  I  M  H  L  F  G  D  G  M  A  F  E  S  I  Y  L  Y  H  W  N  S  W  E  L  *  A  H  H  L  C  H  N  P  L  D  Y  S  M  S  N  E  W  *  N  F  Q  Y  L  L  I  T  F  N  I  V  I  L  R  T  Y  S  *  I  F  L  F  Q  C  I  V  Y  F  P  T  A  I  F  S  V  I  I  S  F  K  M  V  P  V  S  L  I  Y  L  T  I  L  L  G  V  M  *  M  T  V  K  R  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63832" stop="64099"/>
                    <exon start="64625" stop="64698"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTVNLKSLLIFSAFLRVFLIIYGEWQDTHMEVRYTDVDYLVFSDAAALVAAGKSPYQRSTYRYSPLIAFLLVPNSFVHPSWGKFIFSASDMLNETYIEFVRQIFSWDFLSTPF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="66025" e_stop="66790"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66025" e_stop="66790" e_length="766"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66025" stop="66758"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544431" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66344" stop="66790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390517" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAGCTAGTTCTTGTTTTCCGCTTTGCACAAGATTTTCCATTTTGCTTCTTTGTGCAGACTGTGGCATTTGTCGCATTTAACAAGGTTTGTTGGCAAGGCTTGATTATTTTTTATGTTGAGAATCAGTGAATATTAGCTTGATTTTCCTTTAGCAAGATAACGTTCTTTTCCTCTGACAGGTTATGACTGCTCAATACTTTGTTTGGTTCTTCTGTCTCTTGCCACTAATCCTGCCATGGACCAACATGAAGCTCGGAGGAAAAGGACTGGTCTGCATCTTGTTGTGGATGGCAGCTCAGGGTCACTGGTTATTGTGGGGTTATTTGCTTGAATTTAAAGGAAAGAATGTCTTTCTTCAACTCTGGGTGGCAGGTTTGCTGTTCTTGGCTGCAAATACTTTCGTTCTTATCAATATTATTCAGCAACACACATATAGTCCCGTCTTCCAACAGTCATCTCGTGCCTCTTCAAAGAAACAAGTCAAACAGAGATGAGGAATCAGATCATATACCTCCTAATTCACTGGGGGAGGAATTTTCGAGCTAGTAGTGTATTTAGCCATATTCGGTACTTGTAGAGCCTTTCATCATCAGGCAAAGCACTTGGCTTATTCATAGCTCCATGCTTAAAAATACCTTCACTAAAGATGTAGCAAGAGATCGTTATTTTGAAGTTTTGGTCGTTTTGCTTTTAGAGCATACGGAATGATAGCAATTTACAATTTGTTTGTTGCATTTGGTATAAGTTTAATTCAGTTAACCTCTC</gDNA_template>
            <first_frame> A  A  S  S  C  F  P  L  C  T  R  F  S  I  L  L  L  C  A  D  C  G  I  C  R  I  *  Q  G  L  L  A  R  L  D  Y  F  L  C  *  E  S  V  N  I  S  L  I  F  L  *  Q  D  N  V  L  F  L  *  Q  V  M  T  A  Q  Y  F  V  W  F  F  C  L  L  P  L  I  L  P  W  T  N  M  K  L  G  G  K  G  L  V  C  I  L  L  W  M  A  A  Q  G  H  W  L  L  W  G  Y  L  L  E  F  K  G  K  N  V  F  L  Q  L  W  V  A  G  L  L  F  L  A  A  N  T  F  V  L  I  N  I  I  Q  Q  H  T  Y  S  P  V  F  Q  Q  S  S  R  A  S  S  K  K  Q  V  K  Q  R  *  G  I  R  S  Y  T  S  *  F  T  G  G  G  I  F  E  L  V  V  Y  L  A  I  F  G  T  C  R  A  F  H  H  Q  A  K  H  L  A  Y  S  *  L  H  A  *  K  Y  L  H  *  R  C  S  K  R  S  L  F  *  S  F  G  R  F  A  F  R  A  Y  G  M  I  A  I  Y  N  L  F  V  A  F  G  I  S  L  I  Q  L  T  S  </first_frame>
            <second_frame>  Q  L  V  L  V  F  R  F  A  Q  D  F  P  F  C  F  F  V  Q  T  V  A  F  V  A  F  N  K  V  C  W  Q  G  L  I  I  F  Y  V  E  N  Q  *  I  L  A  *  F  S  F  S  K  I  T  F  F  S  S  D  R  L  *  L  L  N  T  L  F  G  S  S  V  S  C  H  *  S  C  H  G  P  T  *  S  S  E  E  K  D  W  S  A  S  C  C  G  W  Q  L  R  V  T  G  Y  C  G  V  I  C  L  N  L  K  E  R  M  S  F  F  N  S  G  W  Q  V  C  C  S  W  L  Q  I  L  S  F  L  S  I  L  F  S  N  T  H  I  V  P  S  S  N  S  H  L  V  P  L  Q  R  N  K  S  N  R  D  E  E  S  D  H  I  P  P  N  S  L  G  E  E  F  S  S  *  *  C  I  *  P  Y  S  V  L  V  E  P  F  I  I  R  Q  S  T  W  L  I  H  S  S  M  L  K  N  T  F  T  K  D  V  A  R  D  R  Y  F  E  V  L  V  V  L  L  L  E  H  T  E  *  *  Q  F  T  I  C  L  L  H  L  V  *  V  *  F  S  *  P  L </second_frame>
            <third_frame>   S  *  F  L  F  S  A  L  H  K  I  F  H  F  A  S  L  C  R  L  W  H  L  S  H  L  T  R  F  V  G  K  A  *  L  F  F  M  L  R  I  S  E  Y  *  L  D  F  P  L  A  R  *  R  S  F  P  L  T  G  Y  D  C  S  I  L  C  L  V  L  L  S  L  A  T  N  P  A  M  D  Q  H  E  A  R  R  K  R  T  G  L  H  L  V  V  D  G  S  S  G  S  L  V  I  V  G  L  F  A  *  I  *  R  K  E  C  L  S  S  T  L  G  G  R  F  A  V  L  G  C  K  Y  F  R  S  Y  Q  Y  Y  S  A  T  H  I  *  S  R  L  P  T  V  I  S  C  L  F  K  E  T  S  Q  T  E  M  R  N  Q  I  I  Y  L  L  I  H  W  G  R  N  F  R  A  S  S  V  F  S  H  I  R  Y  L  *  S  L  S  S  S  G  K  A  L  G  L  F  I  A  P  C  L  K  I  P  S  L  K  M  *  Q  E  I  V  I  L  K  F  W  S  F  C  F  *  S  I  R  N  D  S  N  L  Q  F  V  C  C  I  W  Y  K  F  N  S  V  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66202" stop="66519"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVMTAQYFVWFFCLLPLILPWTNMKLGGKGLVCILLWMAAQGHWLLWGYLLEFKGKNVFLQLWVAGLLFLAANTFVLINIIQQHTYSPVFQQSSRASSKKQVKQR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66275" stop="66571"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSEEKDWSASCCGWQLRVTGYCGVICLNLKERMSFFNSGWQVCCSWLQILSFLSILFSNTHIVPSSNSHLVPLQRNKSNRDEESDHIPPNSLGEEFSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="72626" PGL_stop="73977"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72626" e_stop="72857"/>
            <exon e_start="72952" e_stop="73216"/>
            <exon e_start="73357" e_stop="73859"/>
            <exon e_start="73961" e_stop="73977"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.894" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.635" e_score="0.998"/>
          <exon-only e_score="0.471"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="72626" e_stop="72857" e_length="232"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="72858" i_stop="72951" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72952" e_stop="73216" e_length="265"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.894">
            <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="73357" e_stop="73859" e_length="503"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.635">
            <gDNA_intron_boundary i_start="73860" i_stop="73960" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="0.471">
            <gDNA_exon_boundary e_start="73961" e_stop="73977" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72626" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724295" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72626" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72652" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72680" stop="72857"/>
              <exon start="72952" stop="73153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72684" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73796"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72684" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72684" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72697" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72699" stop="72857"/>
              <exon start="72952" stop="73107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72699" stop="72857"/>
              <exon start="72952" stop="73076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72702" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319257" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72702" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319256" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72707" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72707" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73369"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72709" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72710" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210398" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72713" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210447" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72715" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72723" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576577" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72724" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72724" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72724" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73369"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72731" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326717" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72772" stop="72857"/>
              <exon start="72952" stop="73216"/>
              <exon start="73357" stop="73829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589047" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73071" stop="73216"/>
              <exon start="73357" stop="73701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73131" stop="73216"/>
              <exon start="73357" stop="73859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351632" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73473" stop="73859"/>
              <exon start="73961" stop="73977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73479" stop="73859"/>
              <exon start="73961" stop="73977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227400" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGCCCATCTTCTCCTTTCCTCATTCACTATATAAATCCTCTCCGCCCTTCTTTCTCATATCTCATCCCACAACAAACGTAGCGTTTTGCTTTTGCAACAATCGAGATTCAAAAAACCATGTTTACAGAAGTTGAACAACAACAGCATATAGAGAAACTCGAAATATTCAAGATCCAAGGCAGAGATAAACGTGGCCGCAAAATTTTGCGCATCATCGGAAAATTCTTTCCTG : CTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG : GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA : TGAATAATGATTAGCAA</gDNA_template>
            <first_frame> R  P  S  S  P  F  L  I  H  Y  I  N  P  L  R  P  S  F  S  Y  L  I  P  Q  Q  T  *  R  F  A  F  A  T  I  E  I  Q  K  T  M  F  T  E  V  E  Q  Q  Q  H  I  E  K  L  E  I  F  K  I  Q  G  R  D  K  R  G  R  K  I  L  R  I  I  G  K  F  F  P   : A  R  N  L  S  V  E  V  V  N  K  Y  L  A  E  K  I  F  P  E  L  E  K  R  P  F  A  V  V  Y  V  H  T  D  V  E  K  S  E  N  F  P  G  V  S  A  L  R  S  F  Y  D  A  I  P  V  K  V  R  E  N  L  E  A  I  Y  F  L  H  P  G  L  Q  A  R  L  F  L  A  T  F  G  R  F  I  F  S  G  G :   L  Y  G  K  L  R  Y  V  S  R  V  D  N  L  W  E  H  V  R  R  N  E  I  G  M  P  E  F  V  Y  D  H  D  E  D  L  E  Y  R  P  M  M  D  Y  G  L  E  S  D  H  A  R  V  Y  G  D  A  P  A  V  D  S  P  V  T  M  Y  S  M  R  C  I  S  *  D  N  W  K  P  F  A  V  F  S  V  H  S  *  M  C  R  N  L  M  A  F  F  F  L  P  P  S  D  A  I  F  L  L  C  I  Y  D  *  M  E  V  S  N  *  Q  A  L  F  S  S  C  C  C  Y  I  V  I  V  Q  R  S  S  T  L  K  A  M  M  I  S  Y  L  K  N  P  G  M  L  L  S  F  F  W  K  M  N  I  Y  T  F  M  R   : M  N  N  D  *  Q </first_frame>
            <second_frame>  A  H  L  L  L  S  S  F  T  I  *  I  L  S  A  L  L  S  H  I  S  S  H  N  K  R  S  V  L  L  L  Q  Q  S  R  F  K  K  P  C  L  Q  K  L  N  N  N  S  I  *  R  N  S  K  Y  S  R  S  K  A  E  I  N  V  A  A  K  F  C  A  S  S  E  N  S  F  L  :  L  E  I  *  V  L  K  L  *  T  S  I  *  R  R  R  S  F  R  N  L  R  K  G  R  S  P  W  C  M  F  T  P  M  W  R  K  A  R  I  S  P  E  Y  Q  L  Y  D  R  S  T  M  R  F  R  *  K  S  E  R  I  W  R  L  F  T  F  F  T  L  V  F  K  P  G  S  S  L  P  H  L  V  A  S  S  S  A  E   : G  Y  M  G  N  *  G  M  *  A  G  L  I  I  C  G  S  M  *  G  G  M  R  L  G  C  Q  N  L  C  T  I  M  M  K  I  L  S  T  V  R  *  W  T  M  A  W  R  V  I  M  P  G  S  M  A  M  R  L  P  *  T  H  L  L  Q  C  T  P  *  D  A  S  H  K  I  I  G  S  L  L  Q  S  F  R  F  I  V  R  C  V  G  T  S  W  L  S  F  F  F  L  H  L  M  Q  F  F  C  S  V  Y  T  I  R  W  R  L  A  T  S  K  H  F  F  L  L  V  V  V  I  *  *  *  Y  K  G  H  Q  L  *  K  Q  *  *  F  P  I  *  K  I  L  E  C  C  Y  L  S  S  G  R  *  I  Y  I  L  L  *  G  :  *  I  M  I  S   </second_frame>
            <third_frame>   P  I  F  S  F  P  H  S  L  Y  K  S  S  P  P  F  F  L  I  S  H  P  T  T  N  V  A  F  C  F  C  N  N  R  D  S  K  N  H  V  Y  R  S  *  T  T  T  A  Y  R  E  T  R  N  I  Q  D  P  R  Q  R  *  T  W  P  Q  N  F  A  H  H  R  K  I  L  S  C :   *  K  S  E  C  *  S  C  E  Q  V  F  S  G  E  D  L  S  G  T  *  E  K  A  V  R  R  G  V  C  S  H  R  C  G  E  K  R  E  F  P  R  S  I  S  F  T  I  V  L  R  C  D  S  G  E  S  P  R  E  S  G  G  Y  L  L  S  S  P  W  S  S  S  Q  A  L  P  C  H  I  W  S  L  H  L  Q  R  R  :  V  I  W  E  I  E  V  C  E  Q  G  *  *  S  V  G  A  C  E  E  E  *  D  W  D  A  R  I  C  V  R  S  *  *  R  S  *  V  P  S  D  D  G  L  W  P  G  E  *  S  C  Q  G  L  W  R  C  A  C  R  R  L  T  C  Y  N  V  L  H  E  M  H  L  I  R  *  L  E  A  F  C  S  L  F  G  S  *  L  D  V  *  E  P  H  G  F  L  F  S  S  S  I  *  C  N  F  F  A  L  Y  I  R  L  D  G  G  *  Q  L  A  S  T  F  F  F  L  L  L  L  Y  S  N  S  T  K  V  I  N  F  E  S  N  D  D  F  L  S  E  K  S  W  N  V  V  I  F  L  L  E  D  E  Y  I  Y  F  Y  E  D :   E  *  *  L  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72707" stop="72857"/>
                    <exon start="72952" stop="73216"/>
                    <exon start="73357" stop="73579"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFAFATIEIQKTMFTEVEQQQHIEKLEIFKIQGRDKRGRKILRIIGKFFPARNLSVEVVNKYLAEKIFPELEKRPFAVVYVHTDVEKSENFPGVSALRSFYDAIPVKVRENLEAIYFLHPGLQARLFLATFGRFIFSGGLYGKLRYVSRVDNLWEHVRRNEIGMPEFVYDHDEDLEYRPMMDYGLESDHARVYGDAPAVDSPVTMYSMRCIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="72951" e_stop="73216"/>
            <exon e_start="73357" e_stop="73859"/>
            <exon e_start="73961" e_stop="73977"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.894" e_score="0.995"/>
          <exon-intron don_prob="0.000" acc_prob="0.635" e_score="0.998"/>
          <exon-only e_score="0.471"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="72951" e_stop="73216" e_length="266"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.894">
            <gDNA_intron_boundary i_start="73217" i_stop="73356" i_length="140"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="73357" e_stop="73859" e_length="503"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.635">
            <gDNA_intron_boundary i_start="73860" i_stop="73960" i_length="101"/>
          </intron>
          <exon e_serial="3" e_score="0.471">
            <gDNA_exon_boundary e_start="73961" e_stop="73977" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72951" stop="73161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73071" stop="73216"/>
              <exon start="73357" stop="73701"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73131" stop="73216"/>
              <exon start="73357" stop="73859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351632" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73473" stop="73859"/>
              <exon start="73961" stop="73977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73479" stop="73859"/>
              <exon start="73961" stop="73977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227400" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTAGAAATCTGAGTGTTGAAGTTGTGAACAAGTATTTAGCGGAGAAGATCTTTCCGGAACTTGAGAAAAGGCCGTTCGCCGTGGTGTATGTTCACACCGATGTGGAGAAAAGCGAGAATTTCCCCGGAGTATCAGCTTTACGATCGTTCTACGATGCGATTCCGGTGAAAGTCCGAGAGAATCTGGAGGCTATTTACTTTCTTCACCCTGGTCTTCAAGCCAGGCTCTTCCTTGCCACATTTGGTCGCTTCATCTTCAGCGGAGG : GTTATATGGGAAATTGAGGTATGTGAGCAGGGTTGATAATCTGTGGGAGCATGTGAGGAGGAATGAGATTGGGATGCCAGAATTTGTGTACGATCATGATGAAGATCTTGAGTACCGTCCGATGATGGACTATGGCCTGGAGAGTGATCATGCCAGGGTCTATGGCGATGCGCCTGCCGTAGACTCACCTGTTACAATGTACTCCATGAGATGCATCTCATAAGATAATTGGAAGCCTTTTGCAGTCTTTTCGGTTCATAGTTAGATGTGTAGGAACCTCATGGCTTTCTTTTTTCTTCCTCCATCTGATGCAATTTTTTTGCTCTGTATATACGATTAGATGGAGGTTAGCAACTAGCAAGCACTTTTTTCTTCTTGTTGTTGTTATATAGTAATAGTACAAAGGTCATCAACTTTGAAAGCAATGATGATTTCCTATCTGAAAAATCCTGGAATGTTGTTATCTTTCTTCTGGAAGATGAATATATATACTTTTATGAGGA : TGAATAATGATTAGCAA</gDNA_template>
            <first_frame> A  R  N  L  S  V  E  V  V  N  K  Y  L  A  E  K  I  F  P  E  L  E  K  R  P  F  A  V  V  Y  V  H  T  D  V  E  K  S  E  N  F  P  G  V  S  A  L  R  S  F  Y  D  A  I  P  V  K  V  R  E  N  L  E  A  I  Y  F  L  H  P  G  L  Q  A  R  L  F  L  A  T  F  G  R  F  I  F  S  G  G :   L  Y  G  K  L  R  Y  V  S  R  V  D  N  L  W  E  H  V  R  R  N  E  I  G  M  P  E  F  V  Y  D  H  D  E  D  L  E  Y  R  P  M  M  D  Y  G  L  E  S  D  H  A  R  V  Y  G  D  A  P  A  V  D  S  P  V  T  M  Y  S  M  R  C  I  S  *  D  N  W  K  P  F  A  V  F  S  V  H  S  *  M  C  R  N  L  M  A  F  F  F  L  P  P  S  D  A  I  F  L  L  C  I  Y  D  *  M  E  V  S  N  *  Q  A  L  F  S  S  C  C  C  Y  I  V  I  V  Q  R  S  S  T  L  K  A  M  M  I  S  Y  L  K  N  P  G  M  L  L  S  F  F  W  K  M  N  I  Y  T  F  M  R   : M  N  N  D  *  Q </first_frame>
            <second_frame>  L  E  I  *  V  L  K  L  *  T  S  I  *  R  R  R  S  F  R  N  L  R  K  G  R  S  P  W  C  M  F  T  P  M  W  R  K  A  R  I  S  P  E  Y  Q  L  Y  D  R  S  T  M  R  F  R  *  K  S  E  R  I  W  R  L  F  T  F  F  T  L  V  F  K  P  G  S  S  L  P  H  L  V  A  S  S  S  A  E   : G  Y  M  G  N  *  G  M  *  A  G  L  I  I  C  G  S  M  *  G  G  M  R  L  G  C  Q  N  L  C  T  I  M  M  K  I  L  S  T  V  R  *  W  T  M  A  W  R  V  I  M  P  G  S  M  A  M  R  L  P  *  T  H  L  L  Q  C  T  P  *  D  A  S  H  K  I  I  G  S  L  L  Q  S  F  R  F  I  V  R  C  V  G  T  S  W  L  S  F  F  F  L  H  L  M  Q  F  F  C  S  V  Y  T  I  R  W  R  L  A  T  S  K  H  F  F  L  L  V  V  V  I  *  *  *  Y  K  G  H  Q  L  *  K  Q  *  *  F  P  I  *  K  I  L  E  C  C  Y  L  S  S  G  R  *  I  Y  I  L  L  *  G  :  *  I  M  I  S   </second_frame>
            <third_frame>   *  K  S  E  C  *  S  C  E  Q  V  F  S  G  E  D  L  S  G  T  *  E  K  A  V  R  R  G  V  C  S  H  R  C  G  E  K  R  E  F  P  R  S  I  S  F  T  I  V  L  R  C  D  S  G  E  S  P  R  E  S  G  G  Y  L  L  S  S  P  W  S  S  S  Q  A  L  P  C  H  I  W  S  L  H  L  Q  R  R  :  V  I  W  E  I  E  V  C  E  Q  G  *  *  S  V  G  A  C  E  E  E  *  D  W  D  A  R  I  C  V  R  S  *  *  R  S  *  V  P  S  D  D  G  L  W  P  G  E  *  S  C  Q  G  L  W  R  C  A  C  R  R  L  T  C  Y  N  V  L  H  E  M  H  L  I  R  *  L  E  A  F  C  S  L  F  G  S  *  L  D  V  *  E  P  H  G  F  L  F  S  S  S  I  *  C  N  F  F  A  L  Y  I  R  L  D  G  G  *  Q  L  A  S  T  F  F  F  L  L  L  L  Y  S  N  S  T  K  V  I  N  F  E  S  N  D  D  F  L  S  E  K  S  W  N  V  V  I  F  L  L  E  D  E  Y  I  Y  F  Y  E  D :   E  *  *  L  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72951" stop="73216"/>
                    <exon start="73357" stop="73579"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>486</number_coding_nucleotides>
                  <number_encoded_amino_acids>162</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARNLSVEVVNKYLAEKIFPELEKRPFAVVYVHTDVEKSENFPGVSALRSFYDAIPVKVRENLEAIYFLHPGLQARLFLATFGRFIFSGGLYGKLRYVSRVDNLWEHVRRNEIGMPEFVYDHDEDLEYRPMMDYGLESDHARVYGDAPAVDSPVTMYSMRCIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="77767" PGL_stop="76921"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77767" e_stop="77694"/>
            <exon e_start="77612" e_stop="77281"/>
            <exon e_start="77189" e_stop="76921"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.969" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.907" acc_prob="0.981" e_score="0.994"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="77767" e_stop="77694" e_length="74"/>
          </exon>
          <intron i_serial="1" don_prob="0.969" acc_prob="0.000">
            <gDNA_intron_boundary i_start="77693" i_stop="77613" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="77612" e_stop="77281" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.907" acc_prob="0.981">
            <gDNA_intron_boundary i_start="77280" i_stop="77190" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="77189" e_stop="76921" e_length="269"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77767" stop="77694"/>
              <exon start="77612" stop="77359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77724" stop="77694"/>
              <exon start="77612" stop="77281"/>
              <exon start="77189" stop="76921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549902" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAAGTATATAACTAGGGACGACGACCAAAGGCTTGATCTTCGATACAATCATCACCTTGAACTAGGATATAAG : GTTGAGAGGCACTTAAATGATGGAGATTTTGTTCTCTTCAATCGGCAACCCAGTCTACATAAAATGTCTATTATGGGACATAGGATTAAGATCATGCCATACTCAACTTTCTGCTTGAATTTATCTTTCATTTCTTTCTTACAATGCTGATTTTGATGGTGACGAAATGAACATGCATGTTCCACAGTCATTTGAAACCAGAGCAGAGGTGCTGGAGCTTATGATGGTCCCTAAGTGTATTGTTTCACCCCAGGCAAACTGTAATTGGTATCGTCCAGGATACCCTTTTAGGTTGCCGCGAAGTTATTAAAAGAGATATCTTTATAGAAAAG : GATGTCTTTATGAACATCTTAATGTGGTGGGAGGATTTTGATGGGAAAGTACCCGCTCCAGTGATTCTTAAACCAAGGCCACATTGGACTGGAAAGCAAGTGTTTAACCTCATCATACCAAAACAAATAAATCTTTTAAGATATTCTGCATGGCATAATGATTCAGAAAAAGGATACATAACTCCTGGAAATACTCAAGTTAGAATAGAGAAAGGGGAGTTGCTATCTGGTACTCTTTGCAAAAAGACTCTTGGGACGTCTGCTTCATG</gDNA_template>
            <first_frame> P  S  I  *  L  G  T  T  T  K  G  L  I  F  D  T  I  I  T  L  N  *  D  I  R :   L  R  G  T  *  M  M  E  I  L  F  S  S  I  G  N  P  V  Y  I  K  C  L  L  W  D  I  G  L  R  S  C  H  T  Q  L  S  A  *  I  Y  L  S  F  L  S  Y  N  A  D  F  D  G  D  E  M  N  M  H  V  P  Q  S  F  E  T  R  A  E  V  L  E  L  M  M  V  P  K  C  I  V  S  P  Q  A  N  C  N  W  Y  R  P  G  Y  P  F  R  L  P  R  S  Y  *  K  R  Y  L  Y  R  K   : G  C  L  Y  E  H  L  N  V  V  G  G  F  *  W  E  S  T  R  S  S  D  S  *  T  K  A  T  L  D  W  K  A  S  V  *  P  H  H  T  K  T  N  K  S  F  K  I  F  C  M  A  *  *  F  R  K  R  I  H  N  S  W  K  Y  S  S  *  N  R  E  R  G  V  A  I  W  Y  S  L  Q  K  D  S  W  D  V  C  F  M </first_frame>
            <second_frame>  Q  V  Y  N  *  G  R  R  P  K  A  *  S  S  I  Q  S  S  P  *  T  R  I  *   : G  *  E  A  L  K  *  W  R  F  C  S  L  Q  S  A  T  Q  S  T  *  N  V  Y  Y  G  T  *  D  *  D  H  A  I  L  N  F  L  L  E  F  I  F  H  F  F  L  T  M  L  I  L  M  V  T  K  *  T  C  M  F  H  S  H  L  K  P  E  Q  R  C  W  S  L  *  W  S  L  S  V  L  F  H  P  R  Q  T  V  I  G  I  V  Q  D  T  L  L  G  C  R  E  V  I  K  R  D  I  F  I  E  K  :  D  V  F  M  N  I  L  M  W  W  E  D  F  D  G  K  V  P  A  P  V  I  L  K  P  R  P  H  W  T  G  K  Q  V  F  N  L  I  I  P  K  Q  I  N  L  L  R  Y  S  A  W  H  N  D  S  E  K  G  Y  I  T  P  G  N  T  Q  V  R  I  E  K  G  E  L  L  S  G  T  L  C  K  K  T  L  G  T  S  A  S   </second_frame>
            <third_frame>   K  Y  I  T  R  D  D  D  Q  R  L  D  L  R  Y  N  H  H  L  E  L  G  Y  K  :  V  E  R  H  L  N  D  G  D  F  V  L  F  N  R  Q  P  S  L  H  K  M  S  I  M  G  H  R  I  K  I  M  P  Y  S  T  F  C  L  N  L  S  F  I  S  F  L  Q  C  *  F  *  W  *  R  N  E  H  A  C  S  T  V  I  *  N  Q  S  R  G  A  G  A  Y  D  G  P  *  V  Y  C  F  T  P  G  K  L  *  L  V  S  S  R  I  P  F  *  V  A  A  K  L  L  K  E  I  S  L  *  K  R :   M  S  L  *  T  S  *  C  G  G  R  I  L  M  G  K  Y  P  L  Q  *  F  L  N  Q  G  H  I  G  L  E  S  K  C  L  T  S  S  Y  Q  N  K  *  I  F  *  D  I  L  H  G  I  M  I  Q  K  K  D  T  *  L  L  E  I  L  K  L  E  *  R  K  G  S  C  Y  L  V  L  F  A  K  R  L  L  G  R  L  L  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77388" stop="77281"/>
                    <exon start="77189" stop="76923"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WSLSVLFHPRQTVIGIVQDTLLGCREVIKRDIFIEKDVFMNILMWWEDFDGKVPAPVILKPRPHWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGNTQVRIEKGELLSGTLCKKTLGTSAS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77765" stop="77694"/>
                    <exon start="77612" stop="77463"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KYITRDDDQRLDLRYNHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFCLNLSFISFLQC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="88603" PGL_stop="78983"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87818" e_stop="86856"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="87818" e_stop="86856" e_length="963"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87818" stop="87165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87818" stop="87187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87818" stop="87418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87818" stop="87435"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227034" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87443" stop="86856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87392" stop="86856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378094" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87379" stop="86856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392260" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAGGTTTGCCAGTGGAGGTCTAGAAACAAGTTTTGAACAAGTACAGGCTGAGGAAGTTTTGATAGAGCAGTATTTCTCTATTACATCAACATGACCCTTTTTAGGAGATAGCTTCTATTTACTTACTAGTTAATCAGGATTTGGTAGTTCAGTGAATTGTATTTTTCTGGAATGTTGCAAATTTCGTCATGCCTTTTTATTTTTCTTCCTGTTAGAAGGGAGAAATGATAAAATACTCTAATTGCATACCAGTGTGAATAGATGGAAGATTCATTTTAAAAGAAGGAACATAAAGAACTCTATGAATGATCAAATTAGGGAAAAGAGTAGCAACACTTCCTATATGAGTAGCTTTTACCTTCGAAGAATCATGAAAAAGGAGTAAGGTAAGTGAAAAGCTCAGGATTAGAAGATAAATGTTCTGAAGCTCCCGAGTCTAATATCCATTCACTAGACTTGATTGAAATAAAGAGTAGTCAAACTCACTCCATTTTGATTGTTTATTCAACGGTGAGAATCGGATTATAATTTATGTATAGAGGTGATTCTAAAATTAGACAACACTTAATGGTCTTGCTACATTTCCTTACGGTTTCACGGTTTCACTGATGAATGAAGGGGAAAAAAAACTTGGTCTAATCTTGACGTCTCATAAGGAAGGAAGTGGTCGTTTCTCTATGCATTATTTCTGATCCTGGAATTCAGACCCCATATGAGACCGGCGTCGTTGACCTCTCAGAAGTCGCAAACAAGCCTACTTACGTCATTCTTACTTTACATAGGTTAATTTGTAACGATTCAAAAAAAAAGAAGAGAATTATGTAAATAAGAATAAATAGGTATTTAAGGGCATAATTGTCCTTTCACGTTTTAAATGAATAAATAAATAAATAAATAAAACAGATTTGTATTTATTTATTTTAATGTTATTTGACTAATTCTTGAATTAGTCTCCTAATCCA</gDNA_template>
            <first_frame> S  G  L  P  V  E  V  *  K  Q  V  L  N  K  Y  R  L  R  K  F  *  *  S  S  I  S  L  L  H  Q  H  D  P  F  *  E  I  A  S  I  Y  L  L  V  N  Q  D  L  V  V  Q  *  I  V  F  F  W  N  V  A  N  F  V  M  P  F  Y  F  S  S  C  *  K  G  E  M  I  K  Y  S  N  C  I  P  V  *  I  D  G  R  F  I  L  K  E  G  T  *  R  T  L  *  M  I  K  L  G  K  R  V  A  T  L  P  I  *  V  A  F  T  F  E  E  S  *  K  R  S  K  V  S  E  K  L  R  I  R  R  *  M  F  *  S  S  R  V  *  Y  P  F  T  R  L  D  *  N  K  E  *  S  N  S  L  H  F  D  C  L  F  N  G  E  N  R  I  I  I  Y  V  *  R  *  F  *  N  *  T  T  L  N  G  L  A  T  F  P  Y  G  F  T  V  S  L  M  N  E  G  E  K  K  L  G  L  I  L  T  S  H  K  E  G  S  G  R  F  S  M  H  Y  F  *  S  W  N  S  D  P  I  *  D  R  R  R  *  P  L  R  S  R  K  Q  A  Y  L  R  H  S  Y  F  T  *  V  N  L  *  R  F  K  K  K  E  E  N  Y  V  N  K  N  K  *  V  F  K  G  I  I  V  L  S  R  F  K  *  I  N  K  *  I  N  K  T  D  L  Y  L  F  I  L  M  L  F  D  *  F  L  N  *  S  P  N  P </first_frame>
            <second_frame>  Q  V  C  Q  W  R  S  R  N  K  F  *  T  S  T  G  *  G  S  F  D  R  A  V  F  L  Y  Y  I  N  M  T  L  F  R  R  *  L  L  F  T  Y  *  L  I  R  I  W  *  F  S  E  L  Y  F  S  G  M  L  Q  I  S  S  C  L  F  I  F  L  P  V  R  R  E  K  *  *  N  T  L  I  A  Y  Q  C  E  *  M  E  D  S  F  *  K  K  E  H  K  E  L  Y  E  *  S  N  *  G  K  E  *  Q  H  F  L  Y  E  *  L  L  P  S  K  N  H  E  K  G  V  R  *  V  K  S  S  G  L  E  D  K  C  S  E  A  P  E  S  N  I  H  S  L  D  L  I  E  I  K  S  S  Q  T  H  S  I  L  I  V  Y  S  T  V  R  I  G  L  *  F  M  Y  R  G  D  S  K  I  R  Q  H  L  M  V  L  L  H  F  L  T  V  S  R  F  H  *  *  M  K  G  K  K  N  L  V  *  S  *  R  L  I  R  K  E  V  V  V  S  L  C  I  I  S  D  P  G  I  Q  T  P  Y  E  T  G  V  V  D  L  S  E  V  A  N  K  P  T  Y  V  I  L  T  L  H  R  L  I  C  N  D  S  K  K  K  K  R  I  M  *  I  R  I  N  R  Y  L  R  A  *  L  S  F  H  V  L  N  E  *  I  N  K  *  I  K  Q  I  C  I  Y  L  F  *  C  Y  L  T  N  S  *  I  S  L  L  I   </second_frame>
            <third_frame>   R  F  A  S  G  G  L  E  T  S  F  E  Q  V  Q  A  E  E  V  L  I  E  Q  Y  F  S  I  T  S  T  *  P  F  L  G  D  S  F  Y  L  L  T  S  *  S  G  F  G  S  S  V  N  C  I  F  L  E  C  C  K  F  R  H  A  F  L  F  F  F  L  L  E  G  R  N  D  K  I  L  *  L  H  T  S  V  N  R  W  K  I  H  F  K  R  R  N  I  K  N  S  M  N  D  Q  I  R  E  K  S  S  N  T  S  Y  M  S  S  F  Y  L  R  R  I  M  K  K  E  *  G  K  *  K  A  Q  D  *  K  I  N  V  L  K  L  P  S  L  I  S  I  H  *  T  *  L  K  *  R  V  V  K  L  T  P  F  *  L  F  I  Q  R  *  E  S  D  Y  N  L  C  I  E  V  I  L  K  L  D  N  T  *  W  S  C  Y  I  S  L  R  F  H  G  F  T  D  E  *  R  G  K  K  T  W  S  N  L  D  V  S  *  G  R  K  W  S  F  L  Y  A  L  F  L  I  L  E  F  R  P  H  M  R  P  A  S  L  T  S  Q  K  S  Q  T  S  L  L  T  S  F  L  L  Y  I  G  *  F  V  T  I  Q  K  K  R  R  E  L  C  K  *  E  *  I  G  I  *  G  H  N  C  P  F  T  F  *  M  N  K  *  I  N  K  *  N  R  F  V  F  I  Y  F  N  V  I  *  L  I  L  E  L  V  S  *  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88593" e_stop="88323"/>
            <exon e_start="88241" e_stop="88003"/>
            <exon e_start="83761" e_stop="83487"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.965" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88593" e_stop="88323" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="88322" i_stop="88242" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88241" e_stop="88003" e_length="239"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.965">
            <gDNA_intron_boundary i_start="88002" i_stop="83762" i_length="4241"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83761" e_stop="83487" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88593" stop="88323"/>
              <exon start="88241" stop="88212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323903" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88502" stop="88323"/>
              <exon start="88241" stop="88003"/>
              <exon start="83761" stop="83516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83761" stop="83487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223449" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGAAAGAAGCGAAAACCAGATCTGTACTGAACAAGTGAAATTGACTGAAGAATGGAGTCTTAAAATAGAAACTTACATATAGATTAATCAAAACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATT : AGATAAATGTCTGTGGTGCACATTGAGCATGGTGAGACTACGGAGTTGAGCGATCCTCGACTTGGGACGATTGATCGGAAGATGAAGTGTAAGACGTGTATGGCGAACATGGCTGATGTCCGGGGCATTTTGGTCACCTTGAGCTTGCGAAACCTATGTTTCATATAGGTTTTATGGAACCTGTTCTTAGTATCCTTCGGTGTGTCTGCTTCAATTGCTCCAAAATTCTGGCGGATGAG : GTGCAGGCACAGGTGGACGCTAGAGCTACATGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</gDNA_template>
            <first_frame> T  K  E  A  K  T  R  S  V  L  N  K  *  N  *  L  K  N  G  V  L  K  *  K  L  T  Y  R  L  I  K  T  L  C  Y  L  S  C  S  K  K  K  Q  N  N  Y  S  T  V  *  I  S  S  V  E  V  *  P  R  L  R  H  H  G  F  A  L  P  L  L  A  G  G  G  C  Q  G  P  D  G  P  V  R  H  C  Q  R  R  R  N   : *  I  N  V  C  G  A  H  *  A  W  *  D  Y  G  V  E  R  S  S  T  W  D  D  *  S  E  D  E  V  *  D  V  Y  G  E  H  G  *  C  P  G  H  F  G  H  L  E  L  A  K  P  M  F  H  I  G  F  M  E  P  V  L  S  I  L  R  C  V  C  F  N  C  S  K  I  L  A  D  E  :  V  Q  A  Q  V  D  A  R  A  T  C  S  L  L  Q  L  S  G  H  Q  Y  S  S  G  V  W  *  V  L  M  L  S  R  M  L  L  F  Y  I  L  A  *  F  *  S  *  A  S  G  A  C  S  T  S  V  S  F  L  F  W  F  K  L  C  I  G  A  I  L  A  D  I  Q  L  I  L  N  E  L  F  L  S  V  A  Y  L  L  N  V  R  W   </first_frame>
            <second_frame>  R  K  K  R  K  P  D  L  Y  *  T  S  E  I  D  *  R  M  E  S  *  N  R  N  L  H  I  D  *  S  K  P  S  V  I  Y  L  V  R  K  K  N  K  I  I  I  L  L  Y  K  F  L  L  *  R  C  N  L  G  C  A  T  M  D  L  R  F  P  F  *  P  A  E  V  A  K  V  R  T  V  Q  F  G  I  V  S  A  D  E  I  :  R  *  M  S  V  V  H  I  E  H  G  E  T  T  E  L  S  D  P  R  L  G  T  I  D  R  K  M  K  C  K  T  C  M  A  N  M  A  D  V  R  G  I  L  V  T  L  S  L  R  N  L  C  F  I  *  V  L  W  N  L  F  L  V  S  F  G  V  S  A  S  I  A  P  K  F  W  R  M  R :   C  R  H  R  W  T  L  E  L  H  V  R  C  C  S  Y  P  D  I  S  I  H  P  E  F  G  R  S  S  C  F  R  G  C  Y  C  F  T  F  *  R  S  F  R  V  E  L  A  E  H  V  P  L  A  F  L  S  C  F  G  S  N  F  V  L  V  L  F  W  P  I  Y  N  *  Y  L  M  N  Y  F  F  Q  L  L  I  S  *  M  L  D  G  </second_frame>
            <third_frame>   E  R  S  E  N  Q  I  C  T  E  Q  V  K  L  T  E  E  W  S  L  K  I  E  T  Y  I  *  I  N  Q  N  P  L  L  S  I  L  F  E  K  K  T  K  *  L  F  Y  C  I  N  F  F  C  R  G  V  T  *  V  A  P  P  W  I  C  A  S  P  S  S  R  R  R  L  P  R  S  G  R  S  S  S  A  L  S  A  P  T  K  L :   D  K  C  L  W  C  T  L  S  M  V  R  L  R  S  *  A  I  L  D  L  G  R  L  I  G  R  *  S  V  R  R  V  W  R  T  W  L  M  S  G  A  F  W  S  P  *  A  C  E  T  Y  V  S  Y  R  F  Y  G  T  C  S  *  Y  P  S  V  C  L  L  Q  L  L  Q  N  S  G  G  *   : G  A  G  T  G  G  R  *  S  Y  M  F  V  V  A  A  I  R  T  S  V  F  I  R  S  L  V  G  P  H  A  F  E  D  A  T  V  L  H  S  S  V  V  L  E  L  S  *  R  S  M  F  H  *  R  F  F  P  V  L  V  Q  T  L  Y  W  C  Y  F  G  R  Y  T  I  N  T  *  *  I  I  S  F  S  C  L  S  L  K  C  *  M  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88125" stop="88003"/>
                    <exon start="83761" stop="83681"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPGHFGHLELAKPMFHIGFMEPVLSILRCVCFNCSKILADEVQAQVDARATCSLLQLSGHQYSSGVW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="88603" e_stop="88323"/>
            <exon e_start="88241" e_stop="88003"/>
            <exon e_start="79101" e_stop="78983"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88603" e_stop="88323" e_length="281"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="88322" i_stop="88242" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88241" e_stop="88003" e_length="239"/>
          </exon>
          <intron i_serial="2" don_prob="0.966" acc_prob="0.997">
            <gDNA_intron_boundary i_start="88002" i_stop="79102" i_length="8901"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="79101" e_stop="78983" e_length="119"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88603" stop="88323"/>
              <exon start="88241" stop="88003"/>
              <exon start="79101" stop="78983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340783" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88593" stop="88323"/>
              <exon start="88241" stop="88212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323903" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGAGAGGAGACGAAAGAAGCGAAAACCAGATCTGTACTGAACAAGTGAAATTGACTGAAGAATGGAGTCTTAAAATAGAAACTTACATATAGATTAATCAAAACCCTCTGTTATCTATCTTGTTCGAAAAAAAAACAAAATAATTATTCTACTGTATAAATTTCTTCTGTAGAGGTGTAACCTAGGTTGCGCCACCATGGATTTGCGCTTCCCCTTCTAGCCGGCGGAGGTTGCCAAGGTCCGGACGGTCCAGTTCGGCATTGTCAGCGCCGACGAAATT : AGATAAATGTCTGTGGTGCACATTGAGCATGGTGAGACTACGGAGTTGAGCGATCCTCGACTTGGGACGATTGATCGGAAGATGAAGTGTAAGACGTGTATGGCGAACATGGCTGATGTCCGGGGCATTTTGGTCACCTTGAGCTTGCGAAACCTATGTTTCATATAGGTTTTATGGAACCTGTTCTTAGTATCCTTCGGTGTGTCTGCTTCAATTGCTCCAAAATTCTGGCGGATGAG : GACAATCCCAAGTTCAAACAAGCCATGAGAATCAGGAATCCTAAAAACAGGCTTAGAAAGATGTTGGATGCTTGCAAGAACAAAACAAAATGTGAAGGAGGGGATGAAGTTGATGTACA</gDNA_template>
            <first_frame> L  R  G  D  E  R  S  E  N  Q  I  C  T  E  Q  V  K  L  T  E  E  W  S  L  K  I  E  T  Y  I  *  I  N  Q  N  P  L  L  S  I  L  F  E  K  K  T  K  *  L  F  Y  C  I  N  F  F  C  R  G  V  T  *  V  A  P  P  W  I  C  A  S  P  S  S  R  R  R  L  P  R  S  G  R  S  S  S  A  L  S  A  P  T  K  L :   D  K  C  L  W  C  T  L  S  M  V  R  L  R  S  *  A  I  L  D  L  G  R  L  I  G  R  *  S  V  R  R  V  W  R  T  W  L  M  S  G  A  F  W  S  P  *  A  C  E  T  Y  V  S  Y  R  F  Y  G  T  C  S  *  Y  P  S  V  C  L  L  Q  L  L  Q  N  S  G  G  *   : G  Q  S  Q  V  Q  T  S  H  E  N  Q  E  S  *  K  Q  A  *  K  D  V  G  C  L  Q  E  Q  N  K  M  *  R  R  G  *  S  *  C  T </first_frame>
            <second_frame>  *  E  E  T  K  E  A  K  T  R  S  V  L  N  K  *  N  *  L  K  N  G  V  L  K  *  K  L  T  Y  R  L  I  K  T  L  C  Y  L  S  C  S  K  K  K  Q  N  N  Y  S  T  V  *  I  S  S  V  E  V  *  P  R  L  R  H  H  G  F  A  L  P  L  L  A  G  G  G  C  Q  G  P  D  G  P  V  R  H  C  Q  R  R  R  N   : *  I  N  V  C  G  A  H  *  A  W  *  D  Y  G  V  E  R  S  S  T  W  D  D  *  S  E  D  E  V  *  D  V  Y  G  E  H  G  *  C  P  G  H  F  G  H  L  E  L  A  K  P  M  F  H  I  G  F  M  E  P  V  L  S  I  L  R  C  V  C  F  N  C  S  K  I  L  A  D  E  :  D  N  P  K  F  K  Q  A  M  R  I  R  N  P  K  N  R  L  R  K  M  L  D  A  C  K  N  K  T  K  C  E  G  G  D  E  V  D  V   </second_frame>
            <third_frame>   E  R  R  R  K  K  R  K  P  D  L  Y  *  T  S  E  I  D  *  R  M  E  S  *  N  R  N  L  H  I  D  *  S  K  P  S  V  I  Y  L  V  R  K  K  N  K  I  I  I  L  L  Y  K  F  L  L  *  R  C  N  L  G  C  A  T  M  D  L  R  F  P  F  *  P  A  E  V  A  K  V  R  T  V  Q  F  G  I  V  S  A  D  E  I  :  R  *  M  S  V  V  H  I  E  H  G  E  T  T  E  L  S  D  P  R  L  G  T  I  D  R  K  M  K  C  K  T  C  M  A  N  M  A  D  V  R  G  I  L  V  T  L  S  L  R  N  L  C  F  I  *  V  L  W  N  L  F  L  V  S  F  G  V  S  A  S  I  A  P  K  F  W  R  M  R :   T  I  P  S  S  N  K  P  *  E  S  G  I  L  K  T  G  L  E  R  C  W  M  L  A  R  T  K  Q  N  V  K  E  G  M  K  L  M  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88125" stop="88003"/>
                    <exon start="79101" stop="78985"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPGHFGHLELAKPMFHIGFMEPVLSILRCVCFNCSKILADEDNPKFKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEVDV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="88015" PGL_stop="88548"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88015" e_stop="88548"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88015" e_stop="88548" e_length="534"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88015" stop="88548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88015" stop="88548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349170" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88015" stop="88537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352610" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTTGGAGCAATTGAAGCAGACACACCGAAGGATACTAAGAACAGGTTCCATAAAACCTATATGAAACATAGGTTTCGCAAGCTCAAGGTGACCAAAATGCCCCGGACATCAGCCATGTTCGCCATACACGTCTTACACTTCATCTTCCGATCAATCGTCCCAAGTCGAGGATCGCTCAACTCCGTAGTCTCACCATGCTCAATGTGCACCACAGACATTTATCTCTGGAAACGAAGAAACAAAAACTAAATCAAATTTAAACCCTAGAGAATTCAACAAAATGAATCAAGATTAGTGAAAATTACAATTTCGTCGGCGCTGACAATGCCGAACTGGACCGTCCGGACCTTGGCAACCTCCGCCGGCTAGAAGGGGAAGCGCAAATCCATGGTGGCGCAACCTAGGTTACACCTCTACAGAAGAAATTTATACAGTAGAATAATTATTTTGTTTTTTTTTCGAACAAGATAGATAACAGAGGGTTTTGATTAATCTATATGTAAGTTTCTATTTTAAGACTCCATTCTTCAG</gDNA_template>
            <first_frame> N  F  G  A  I  E  A  D  T  P  K  D  T  K  N  R  F  H  K  T  Y  M  K  H  R  F  R  K  L  K  V  T  K  M  P  R  T  S  A  M  F  A  I  H  V  L  H  F  I  F  R  S  I  V  P  S  R  G  S  L  N  S  V  V  S  P  C  S  M  C  T  T  D  I  Y  L  W  K  R  R  N  K  N  *  I  K  F  K  P  *  R  I  Q  Q  N  E  S  R  L  V  K  I  T  I  S  S  A  L  T  M  P  N  W  T  V  R  T  L  A  T  S  A  G  *  K  G  K  R  K  S  M  V  A  Q  P  R  L  H  L  Y  R  R  N  L  Y  S  R  I  I  I  L  F  F  F  R  T  R  *  I  T  E  G  F  D  *  S  I  C  K  F  L  F  *  D  S  I  L  Q </first_frame>
            <second_frame>  I  L  E  Q  L  K  Q  T  H  R  R  I  L  R  T  G  S  I  K  P  I  *  N  I  G  F  A  S  S  R  *  P  K  C  P  G  H  Q  P  C  S  P  Y  T  S  Y  T  S  S  S  D  Q  S  S  Q  V  E  D  R  S  T  P  *  S  H  H  A  Q  C  A  P  Q  T  F  I  S  G  N  E  E  T  K  T  K  S  N  L  N  P  R  E  F  N  K  M  N  Q  D  *  *  K  L  Q  F  R  R  R  *  Q  C  R  T  G  P  S  G  P  W  Q  P  P  P  A  R  R  G  S  A  N  P  W  W  R  N  L  G  Y  T  S  T  E  E  I  Y  T  V  E  *  L  F  C  F  F  F  E  Q  D  R  *  Q  R  V  L  I  N  L  Y  V  S  F  Y  F  K  T  P  F  F   </second_frame>
            <third_frame>   F  W  S  N  *  S  R  H  T  E  G  Y  *  E  Q  V  P  *  N  L  Y  E  T  *  V  S  Q  A  Q  G  D  Q  N  A  P  D  I  S  H  V  R  H  T  R  L  T  L  H  L  P  I  N  R  P  K  S  R  I  A  Q  L  R  S  L  T  M  L  N  V  H  H  R  H  L  S  L  E  T  K  K  Q  K  L  N  Q  I  *  T  L  E  N  S  T  K  *  I  K  I  S  E  N  Y  N  F  V  G  A  D  N  A  E  L  D  R  P  D  L  G  N  L  R  R  L  E  G  E  A  Q  I  H  G  G  A  T  *  V  T  P  L  Q  K  K  F  I  Q  *  N  N  Y  F  V  F  F  S  N  K  I  D  N  R  G  F  *  L  I  Y  M  *  V  S  I  L  R  L  H  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88015" stop="88266"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFGAIEADTPKDTKNRFHKTYMKHRFRKLKVTKMPRTSAMFAIHVLHFIFRSIVPSRGSLNSVVSPCSMCTTDIYLWKRRNKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="98179" PGL_stop="97719"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98179" e_stop="97719"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="98179" e_stop="97719" e_length="461"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98179" stop="97719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225402" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98110" stop="97719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222116" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98101" stop="97719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225263" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATTCAGAGTGTATAAATTTGAGGAAGAGGAGCATTATTGGAAGGAAGTTACAAACTTGAATGACCAAGTCATATTTGTTGGAGATGATGCATCGTATTGGTCCTACTGTGTGTCTGCTAAAGATTTTCCAGGGTGCAGAGGAAATTTAGTTTACTTCATAGATCAATTCAGGAAAGCTGGGGATGGAGATCTCCATGATTTTTGGGATGCGCTAAAACATGAAAATGACTATTCACTTGGGGGATTTGACATGGAGAACGCGTTTATTGGGCCAATGGCATGTTTCCCCGGTTACACTGATTTTTTCTGGCCACCTCCTAGCTGGCTCAACTGAGATTTTCTCTCCAATGACATTTACTCCTATGATCCATTTTATGTGTTAGTCAAAAATATTATGTGAAAAGTATTGTATGTCACTGCTTTTTCAGTAAATTCTAGACAAAAGTCATTTTCGTTTAA</gDNA_template>
            <first_frame> R  F  R  V  Y  K  F  E  E  E  E  H  Y  W  K  E  V  T  N  L  N  D  Q  V  I  F  V  G  D  D  A  S  Y  W  S  Y  C  V  S  A  K  D  F  P  G  C  R  G  N  L  V  Y  F  I  D  Q  F  R  K  A  G  D  G  D  L  H  D  F  W  D  A  L  K  H  E  N  D  Y  S  L  G  G  F  D  M  E  N  A  F  I  G  P  M  A  C  F  P  G  Y  T  D  F  F  W  P  P  P  S  W  L  N  *  D  F  L  S  N  D  I  Y  S  Y  D  P  F  Y  V  L  V  K  N  I  M  *  K  V  L  Y  V  T  A  F  S  V  N  S  R  Q  K  S  F  S  F   </first_frame>
            <second_frame>  D  S  E  C  I  N  L  R  K  R  S  I  I  G  R  K  L  Q  T  *  M  T  K  S  Y  L  L  E  M  M  H  R  I  G  P  T  V  C  L  L  K  I  F  Q  G  A  E  E  I  *  F  T  S  *  I  N  S  G  K  L  G  M  E  I  S  M  I  F  G  M  R  *  N  M  K  M  T  I  H  L  G  D  L  T  W  R  T  R  L  L  G  Q  W  H  V  S  P  V  T  L  I  F  S  G  H  L  L  A  G  S  T  E  I  F  S  P  M  T  F  T  P  M  I  H  F  M  C  *  S  K  I  L  C  E  K  Y  C  M  S  L  L  F  Q  *  I  L  D  K  S  H  F  R  L  </second_frame>
            <third_frame>   I  Q  S  V  *  I  *  G  R  G  A  L  L  E  G  S  Y  K  L  E  *  P  S  H  I  C  W  R  *  C  I  V  L  V  L  L  C  V  C  *  R  F  S  R  V  Q  R  K  F  S  L  L  H  R  S  I  Q  E  S  W  G  W  R  S  P  *  F  L  G  C  A  K  T  *  K  *  L  F  T  W  G  I  *  H  G  E  R  V  Y  W  A  N  G  M  F  P  R  L  H  *  F  F  L  A  T  S  *  L  A  Q  L  R  F  S  L  Q  *  H  L  L  L  *  S  I  L  C  V  S  Q  K  Y  Y  V  K  S  I  V  C  H  C  F  F  S  K  F  *  T  K  V  I  F  V  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98179" stop="97844"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RFRVYKFEEEEHYWKEVTNLNDQVIFVGDDASYWSYCVSAKDFPGCRGNLVYFIDQFRKAGDGDLHDFWDALKHENDYSLGGFDMENAFIGPMACFPGYTDFFWPPPSWLN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="99176" PGL_stop="98508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99176" e_stop="98508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="99176" e_stop="98508" e_length="669"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99176" stop="98508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99176" stop="98672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320053" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACGACTAAACTGCAGTTTTGGTGAAGATGAAAGAGAAGAAGATGAAGAAGCTGTATTCTTGGCCCATATGGGCTGATCTTCCTGAAGAACTACTTGTTAAGATCAGTAAGTGCCTCAAATATTCATTTCAAGTTGGTCATTTTCGTGCTGTTTGTACCTCTTGGAGATCCGCAGTTCCATTATTTCCCCTTCATAAAAGACTCTCCATTGTCCCTAAATACATTGGCAGTAAAAAGCCTCAAAGTAAATGCATGAATAGGTTCGTTTTCCGGCTTGATCTTCAACAACTTCCATCACCATCACCGTCACCCACCAGTTATTTGATAGCTGTGGCGGAACAATTCAACGGAGACGGCCAAAGCCAACTCCACCTATTGAACCCTGTCACTGGAAGTCCTATTCCTATCTCCTCATCACCATCAAACTTGTTGTTTCCAAGAGAGATTAATTTGAACAAATTTCGCGTCTCTATACTGCATAAATCTTCCTTGATGTTTCATCCACACACAAATCGCTATCTTATTGGTAAAGTTGTTTATCTTTCCACTCTCCGACAATCCTCTGACGGACGTATTCCGAAAGCAGCTGCTGTTCTTGGAAGTGGAAAGGTGTCTTTGTTTACAATTAATACAAGAGAGAGAGTTATCTTAAATTATTTGATGGATGG</gDNA_template>
            <first_frame> L  R  L  N  C  S  F  G  E  D  E  R  E  E  D  E  E  A  V  F  L  A  H  M  G  *  S  S  *  R  T  T  C  *  D  Q  *  V  P  Q  I  F  I  S  S  W  S  F  S  C  C  L  Y  L  L  E  I  R  S  S  I  I  S  P  S  *  K  T  L  H  C  P  *  I  H  W  Q  *  K  A  S  K  *  M  H  E  *  V  R  F  P  A  *  S  S  T  T  S  I  T  I  T  V  T  H  Q  L  F  D  S  C  G  G  T  I  Q  R  R  R  P  K  P  T  P  P  I  E  P  C  H  W  K  S  Y  S  Y  L  L  I  T  I  K  L  V  V  S  K  R  D  *  F  E  Q  I  S  R  L  Y  T  A  *  I  F  L  D  V  S  S  T  H  K  S  L  S  Y  W  *  S  C  L  S  F  H  S  P  T  I  L  *  R  T  Y  S  E  S  S  C  C  S  W  K  W  K  G  V  F  V  Y  N  *  Y  K  R  E  S  Y  L  K  L  F  D  G  W </first_frame>
            <second_frame>  Y  D  *  T  A  V  L  V  K  M  K  E  K  K  M  K  K  L  Y  S  W  P  I  W  A  D  L  P  E  E  L  L  V  K  I  S  K  C  L  K  Y  S  F  Q  V  G  H  F  R  A  V  C  T  S  W  R  S  A  V  P  L  F  P  L  H  K  R  L  S  I  V  P  K  Y  I  G  S  K  K  P  Q  S  K  C  M  N  R  F  V  F  R  L  D  L  Q  Q  L  P  S  P  S  P  S  P  T  S  Y  L  I  A  V  A  E  Q  F  N  G  D  G  Q  S  Q  L  H  L  L  N  P  V  T  G  S  P  I  P  I  S  S  S  P  S  N  L  L  F  P  R  E  I  N  L  N  K  F  R  V  S  I  L  H  K  S  S  L  M  F  H  P  H  T  N  R  Y  L  I  G  K  V  V  Y  L  S  T  L  R  Q  S  S  D  G  R  I  P  K  A  A  A  V  L  G  S  G  K  V  S  L  F  T  I  N  T  R  E  R  V  I  L  N  Y  L  M  D   </second_frame>
            <third_frame>   T  T  K  L  Q  F  W  *  R  *  K  R  R  R  *  R  S  C  I  L  G  P  Y  G  L  I  F  L  K  N  Y  L  L  R  S  V  S  A  S  N  I  H  F  K  L  V  I  F  V  L  F  V  P  L  G  D  P  Q  F  H  Y  F  P  F  I  K  D  S  P  L  S  L  N  T  L  A  V  K  S  L  K  V  N  A  *  I  G  S  F  S  G  L  I  F  N  N  F  H  H  H  H  R  H  P  P  V  I  *  *  L  W  R  N  N  S  T  E  T  A  K  A  N  S  T  Y  *  T  L  S  L  E  V  L  F  L  S  P  H  H  H  Q  T  C  C  F  Q  E  R  L  I  *  T  N  F  A  S  L  Y  C  I  N  L  P  *  C  F  I  H  T  Q  I  A  I  L  L  V  K  L  F  I  F  P  L  S  D  N  P  L  T  D  V  F  R  K  Q  L  L  F  L  E  V  E  R  C  L  C  L  Q  L  I  Q  E  R  E  L  S  *  I  I  *  W  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99166" stop="98510"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAVLVKMKEKKMKKLYSWPIWADLPEELLVKISKCLKYSFQVGHFRAVCTSWRSAVPLFPLHKRLSIVPKYIGSKKPQSKCMNRFVFRLDLQQLPSPSPSPTSYLIAVAEQFNGDGQSQLHLLNPVTGSPIPISSSPSNLLFPREINLNKFRVSILHKSSLMFHPHTNRYLIGKVVYLSTLRQSSDGRIPKAAAVLGSGKVSLFTINTRERVILNYLMD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="102209" PGL_stop="104419"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102209" e_stop="102310"/>
            <exon e_start="102414" e_stop="102508"/>
            <exon e_start="102749" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="104010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102209" e_stop="102310" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.000">
            <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102414" e_stop="102508" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.982">
            <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102749" e_stop="102925" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="103552" e_stop="104010" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102209" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102214" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103743"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102234" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102242" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102242" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102254" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102259" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102455" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102507" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102814" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102856" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103026" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGTGCCCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG : AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA : GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</gDNA_template>
            <first_frame> K  C  P  N  Q  L  I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  :  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K :   S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K  G  S  F  H  S  N </first_frame>
            <second_frame>  S  A  L  I  S  *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R :   K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T   : S  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  G  H  S  I  L   </second_frame>
            <third_frame>   V  P  *  S  V  N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S   : E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  :  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R  V  I  P  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102209" stop="102310"/>
                    <exon start="102414" stop="102508"/>
                    <exon start="102749" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KCPNQLISTEPQFQISHLHRLTATVTSVPAVDSPKNLVNSLQVKYLMVFLSWTRPSPEEQKACINKSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="102209" e_stop="102310"/>
            <exon e_start="102414" e_stop="102508"/>
            <exon e_start="102749" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="103819"/>
            <exon e_start="104391" e_stop="104419"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.264" e_score="1.000"/>
          <exon-only e_score="0.690"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102209" e_stop="102310" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.000">
            <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102414" e_stop="102508" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.982">
            <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102749" e_stop="102925" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="103552" e_stop="103819" e_length="268"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.264">
            <gDNA_intron_boundary i_start="103820" i_stop="104390" i_length="571"/>
          </intron>
          <exon e_serial="6" e_score="0.690">
            <gDNA_exon_boundary e_start="104391" e_stop="104419" e_length="29"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102209" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102214" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103743"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102234" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102242" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102242" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258857" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102254" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102259" stop="102310"/>
              <exon start="102414" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102455" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103819"/>
              <exon start="104391" stop="104419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232054" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGTGCCCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG : AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA : GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGT : ACAAAAAAGAAGCAAAAGCAATACCAAAA</gDNA_template>
            <first_frame> K  C  P  N  Q  L  I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  :  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K :   S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M   : Y  K  K  E  A  K  A  I  P  K </first_frame>
            <second_frame>  S  A  L  I  S  *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R :   K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T   : S  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  :  T  K  K  K  Q  K  Q  Y  Q   </second_frame>
            <third_frame>   V  P  *  S  V  N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S   : E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  :  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V :   Q  K  R  S  K  S  N  T  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102209" stop="102310"/>
                    <exon start="102414" stop="102508"/>
                    <exon start="102749" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KCPNQLISTEPQFQISHLHRLTATVTSVPAVDSPKNLVNSLQVKYLMVFLSWTRPSPEEQKACINKSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="102225" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="104010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102225" e_stop="102925" e_length="701"/>
          </exon>
          <intron i_serial="1" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="103552" e_stop="104010" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102925"/>
              <exon start="103001" stop="103006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102460" stop="102925"/>
              <exon start="103001" stop="103044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102814" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102856" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103026" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</gDNA_template>
            <first_frame> *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R  *  R  F  F  R  S  H  T  P  L  L  C  S  Y  L  F  Q  S  *  I  I  S  T  F  V  F  D  A  R  I  F  L  *  Q  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K  *  R  M  P  R  T  C  Y  W  L  R  S  N  L  F  V  L  S  C  F  L  I  R  L  P  E  I  L  D  R  Y  I  V  L  G  H  S  T  Y  V  Y  F  K  I  K  L  C  V  N  S  T  N  *  N  R  M  S  N  L  F  I  S  L  S  I  G  L  I  V  G  I  I  I  E  G  F  V  C  N  R  S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K  G  S  F  H  S  N </first_frame>
            <second_frame>  N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S  G  K  D  F  S  D  L  I  L  L  F  S  A  P  I  Y  S  N  H  E  *  F  L  R  S  F  L  M  L  V  F  F  F  S  R  K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T  S  K  E  C  P  E  L  V  T  G  F  V  P  I  Y  L  S  Y  L  A  F  *  S  V  Y  Q  R  F  *  T  A  T  S  F  W  D  T  L  R  M  F  I  L  R  L  N  S  V  S  T  Q  Q  I  E  I  E  *  V  I  Y  L  F  P  F  L  L  V  *  L  W  E  S  L  L  R  V  S  S  V  T  G  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  G  H  S  I  L   </second_frame>
            <third_frame>   I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  V  K  I  F  P  I  S  Y  S  S  S  L  L  L  F  I  P  I  M  N  N  F  Y  V  R  F  *  C  S  Y  F  S  L  A  E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  V  K  N  A  Q  N  L  L  L  A  S  F  Q  F  I  C  L  I  L  L  F  N  P  F  T  R  D  S  R  P  L  H  R  F  G  T  L  Y  V  C  L  F  *  D  *  T  L  C  Q  L  N  K  L  K  *  N  E  *  F  I  Y  F  P  F  Y  W  F  N  C  G  N  H  Y  *  G  F  R  L  *  Q  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R  V  I  P  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102669" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>630</number_coding_nucleotides>
                  <number_encoded_amino_acids>210</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRMSNLFISLSIGLIVGIIIEGFVCNRSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="102242" e_stop="102310"/>
            <exon e_start="102438" e_stop="102508"/>
            <exon e_start="102749" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="104010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.909" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102242" e_stop="102310" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.909">
            <gDNA_intron_boundary i_start="102311" i_stop="102437" i_length="127"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102438" e_stop="102508" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.982">
            <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102749" e_stop="102925" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="103552" e_stop="104010" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102242" stop="102310"/>
              <exon start="102438" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102247" stop="102310"/>
              <exon start="102438" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103056"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102455" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102507" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102814" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102856" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103026" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG : GTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA : GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</gDNA_template>
            <first_frame> Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  :  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K :   S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K  G  S  F  H  S  N </first_frame>
            <second_frame>  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R :   L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T   : S  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  G  H  S  I  L   </second_frame>
            <third_frame>   I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S   : G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  :  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R  V  I  P  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102242" stop="102310"/>
                    <exon start="102438" stop="102508"/>
                    <exon start="102749" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QFQISHLHRLTATVTSVPAVDSPVKYLMVFLSWTRPSPEEQKACINKSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="102224" e_stop="102310"/>
            <exon e_start="102438" e_stop="102622"/>
            <exon e_start="102749" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="104010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.909" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102224" e_stop="102310" e_length="87"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.909">
            <gDNA_intron_boundary i_start="102311" i_stop="102437" i_length="127"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102438" e_stop="102622" e_length="185"/>
          </exon>
          <intron i_serial="2" don_prob="0.914" acc_prob="0.982">
            <gDNA_intron_boundary i_start="102623" i_stop="102748" i_length="126"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102749" e_stop="102925" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="103552" e_stop="104010" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102224" stop="102310"/>
              <exon start="102438" stop="102622"/>
              <exon start="102749" stop="102853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325274" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102248" stop="102310"/>
              <exon start="102438" stop="102622"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544611" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102249" stop="102310"/>
              <exon start="102438" stop="102622"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102814" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102856" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103026" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG : GTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTAC : GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</gDNA_template>
            <first_frame> L  I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  :  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K  *  R  M  P  R  T  C  Y  W  L  R  S  N  L  F  V  L  S  C  F  L  I  R  L  P  E  I  L  D  R  Y  I  V  L  G  H  S  T :   S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K  G  S  F  H  S  N </first_frame>
            <second_frame>  *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R :   L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T  S  K  E  C  P  E  L  V  T  G  F  V  P  I  Y  L  S  Y  L  A  F  *  S  V  Y  Q  R  F  *  T  A  T  S  F  W  D  T  L   : R  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  G  H  S  I  L   </second_frame>
            <third_frame>   N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S   : G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  V  K  N  A  Q  N  L  L  L  A  S  F  Q  F  I  C  L  I  L  L  F  N  P  F  T  R  D  S  R  P  L  H  R  F  G  T  L  Y  :  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R  V  I  P  F  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102513" stop="102622"/>
                    <exon start="102749" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMPRTCYWLRSNLFVLSCFLIRLPEILDRYIVLGHSTSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="102215" e_stop="102508"/>
            <exon e_start="102749" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="104010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.931" acc_prob="0.982" e_score="0.925"/>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="102215" e_stop="102508" e_length="294"/>
          </exon>
          <intron i_serial="1" don_prob="0.931" acc_prob="0.982">
            <gDNA_intron_boundary i_start="102509" i_stop="102748" i_length="240"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102749" e_stop="102925" e_length="177"/>
          </exon>
          <intron i_serial="2" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="103552" e_stop="104010" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102215" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102455" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102507" stop="102508"/>
              <exon start="102749" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102814" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102856" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103026" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCAGTTAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAA : GTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</gDNA_template>
            <first_frame> P  N  Q  L  I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  V  K  I  F  P  I  S  Y  S  S  S  L  L  L  F  I  P  I  M  N  N  F  Y  V  R  F  *  C  S  Y  F  S  L  A  E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  :  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R  V  I  P  F  *  </first_frame>
            <second_frame>  L  I  S  *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R  *  R  F  F  R  S  H  T  P  L  L  C  S  Y  L  F  Q  S  *  I  I  S  T  F  V  F  D  A  R  I  F  L  *  Q  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K :   S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K  G  S  F  H  S  N </second_frame>
            <third_frame>   *  S  V  N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S  G  K  D  F  S  D  L  I  L  L  F  S  A  P  I  Y  S  N  H  E  *  F  L  R  S  F  L  M  L  V  F  F  F  S  R  K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T   : S  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  G  H  S  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102411" stop="102508"/>
                    <exon start="102749" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKNLVNSLQVKYLMVFLSWTRPSPEEQKACINKSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="102225" e_stop="102310"/>
            <exon e_start="102414" e_stop="102925"/>
            <exon e_start="103001" e_stop="103196"/>
            <exon e_start="103552" e_stop="104010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102225" e_stop="102310" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.000">
            <gDNA_intron_boundary i_start="102311" i_stop="102413" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102414" e_stop="102925" e_length="512"/>
          </exon>
          <intron i_serial="2" don_prob="0.801" acc_prob="0.992">
            <gDNA_intron_boundary i_start="102926" i_stop="103000" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103001" e_stop="103196" e_length="196"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="103552" e_stop="104010" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102310"/>
              <exon start="102414" stop="102848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102460" stop="102925"/>
              <exon start="103001" stop="103044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248777" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102770" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102814" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="104010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102856" stop="102925"/>
              <exon start="103001" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103026" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCG : AAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAG : GCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGGGTCATTCCATTCTAAT</gDNA_template>
            <first_frame> *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R :   K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T  S  K  E  C  P  E  L  V  T  G  F  V  P  I  Y  L  S  Y  L  A  F  *  S  V  Y  Q  R  F  *  T  A  T  S  F  W  D  T  L  R  M  F  I  L  R  L  N  S  V  S  T  Q  Q  I  E  I  E  *  V  I  Y  L  F  P  F  L  L  V  *  L  W  E  S  L  L  R  V  S  S  V  T  G  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G   : G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  G  H  S  I  L   </first_frame>
            <second_frame>  N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S   : E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  V  K  N  A  Q  N  L  L  L  A  S  F  Q  F  I  C  L  I  L  L  F  N  P  F  T  R  D  S  R  P  L  H  R  F  G  T  L  Y  V  C  L  F  *  D  *  T  L  C  Q  L  N  K  L  K  *  N  E  *  F  I  Y  F  P  F  Y  W  F  N  C  G  N  H  Y  *  G  F  R  L  *  Q  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  :  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R  V  I  P  F  *  </second_frame>
            <third_frame>   I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  :  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K  *  R  M  P  R  T  C  Y  W  L  R  S  N  L  F  V  L  S  C  F  L  I  R  L  P  E  I  L  D  R  Y  I  V  L  G  H  S  T  Y  V  Y  F  K  I  K  L  C  V  N  S  T  N  *  N  R  M  S  N  L  F  I  S  L  S  I  G  L  I  V  G  I  I  I  E  G  F  V  C  N  R  S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R :   H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K  G  S  F  H  S  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102669" stop="102925"/>
                    <exon start="103001" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>630</number_coding_nucleotides>
                  <number_encoded_amino_acids>210</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRMSNLFISLSIGLIVGIIIEGFVCNRSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="102225" e_stop="103196"/>
            <exon e_start="103552" e_stop="103994"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102225" e_stop="103196" e_length="972"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.968">
            <gDNA_intron_boundary i_start="103197" i_stop="103551" i_length="355"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="103552" e_stop="103994" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102894" stop="103196"/>
              <exon start="103552" stop="103771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103026" stop="103196"/>
              <exon start="103552" stop="103994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272997" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTG : GCTGGTGAAGAACGTTTTTCAATAGCATTGGACGAAAATGATCTAGTTTGGTACGAGATACTTTCCTTCTCGAAGCCTGCACATTTGCTGTCACTCTTTGGATACCCTTATGTTCTTCTAAGGCAAAAGTACTTTGCTCATCAATCAGGTAGTGCGGTGAAGAAACATTTATCTGCTTAAAACATGTGAGGCTATAACTGTGTGTGAACAGGAACTCTTTGTTGTAAAAGATTCCCATCCATAGTTATGTTGGGTCTTCATTTCATGTATATTTCTTTGCATTATATGCACGACCTAGTTACTAATAATGCAATTCTAGTCCTTGTTAAAGAAAAATGTAATTGTAGTCCAATAGCTGGATAATCAGTGTGATTTAATTAAGTGAATGCATAGAAGAAAAACTATGCATAAGAACCCAATAGCGAGAATCATTTCAAGAAAGG</gDNA_template>
            <first_frame> *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R  *  R  F  F  R  S  H  T  P  L  L  C  S  Y  L  F  Q  S  *  I  I  S  T  F  V  F  D  A  R  I  F  L  *  Q  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K  *  R  M  P  R  T  C  Y  W  L  R  S  N  L  F  V  L  S  C  F  L  I  R  L  P  E  I  L  D  R  Y  I  V  L  G  H  S  T  Y  V  Y  F  K  I  K  L  C  V  N  S  T  N  *  N  R  M  S  N  L  F  I  S  L  S  I  G  L  I  V  G  I  I  I  E  G  F  V  C  N  R  S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R  F  G  I  S  V  I  L  V  E  I  S  C  D  Q  W  S  D  Y  V  P  N  *  L  C  R  H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  :  A  G  E  E  R  F  S  I  A  L  D  E  N  D  L  V  W  Y  E  I  L  S  F  S  K  P  A  H  L  L  S  L  F  G  Y  P  Y  V  L  L  R  Q  K  Y  F  A  H  Q  S  G  S  A  V  K  K  H  L  S  A  *  N  M  *  G  Y  N  C  V  *  T  G  T  L  C  C  K  R  F  P  S  I  V  M  L  G  L  H  F  M  Y  I  S  L  H  Y  M  H  D  L  V  T  N  N  A  I  L  V  L  V  K  E  K  C  N  C  S  P  I  A  G  *  S  V  *  F  N  *  V  N  A  *  K  K  N  Y  A  *  E  P  N  S  E  N  H  F  K  K   </first_frame>
            <second_frame>  N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S  G  K  D  F  S  D  L  I  L  L  F  S  A  P  I  Y  S  N  H  E  *  F  L  R  S  F  L  M  L  V  F  F  F  S  R  K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T  S  K  E  C  P  E  L  V  T  G  F  V  P  I  Y  L  S  Y  L  A  F  *  S  V  Y  Q  R  F  *  T  A  T  S  F  W  D  T  L  R  M  F  I  L  R  L  N  S  V  S  T  Q  Q  I  E  I  E  *  V  I  Y  L  F  P  F  L  L  V  *  L  W  E  S  L  L  R  V  S  S  V  T  G  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G  G  L  V  Y  Q  L  F  L  *  K  Y  H  A  I  N  G  L  I  M  Y  Q  T  N  F  A  G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W :   L  V  K  N  V  F  Q  *  H  W  T  K  M  I  *  F  G  T  R  Y  F  P  S  R  S  L  H  I  C  C  H  S  L  D  T  L  M  F  F  *  G  K  S  T  L  L  I  N  Q  V  V  R  *  R  N  I  Y  L  L  K  T  C  E  A  I  T  V  C  E  Q  E  L  F  V  V  K  D  S  H  P  *  L  C  W  V  F  I  S  C  I  F  L  C  I  I  C  T  T  *  L  L  I  M  Q  F  *  S  L  L  K  K  N  V  I  V  V  Q  *  L  D  N  Q  C  D  L  I  K  *  M  H  R  R  K  T  M  H  K  N  P  I  A  R  I  I  S  R  K  </second_frame>
            <third_frame>   I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  V  K  I  F  P  I  S  Y  S  S  S  L  L  L  F  I  P  I  M  N  N  F  Y  V  R  F  *  C  S  Y  F  S  L  A  E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  V  K  N  A  Q  N  L  L  L  A  S  F  Q  F  I  C  L  I  L  L  F  N  P  F  T  R  D  S  R  P  L  H  R  F  G  T  L  Y  V  C  L  F  *  D  *  T  L  C  Q  L  N  K  L  K  *  N  E  *  F  I  Y  F  P  F  Y  W  F  N  C  G  N  H  Y  *  G  F  R  L  *  Q  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  V  W  Y  I  S  Y  S  C  R  N  I  M  R  S  M  V  *  L  C  T  K  L  T  L  Q  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A   : G  W  *  R  T  F  F  N  S  I  G  R  K  *  S  S  L  V  R  D  T  F  L  L  E  A  C  T  F  A  V  T  L  W  I  P  L  C  S  S  K  A  K  V  L  C  S  S  I  R  *  C  G  E  E  T  F  I  C  L  K  H  V  R  L  *  L  C  V  N  R  N  S  L  L  *  K  I  P  I  H  S  Y  V  G  S  S  F  H  V  Y  F  F  A  L  Y  A  R  P  S  Y  *  *  C  N  S  S  P  C  *  R  K  M  *  L  *  S  N  S  W  I  I  S  V  I  *  L  S  E  C  I  E  E  K  L  C  I  R  T  Q  *  R  E  S  F  Q  E  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102993" stop="103196"/>
                    <exon start="103552" stop="103731"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLAGEERFSIALDENDLVWYEILSFSKPAHLLSLFGYPYVLLRQKYFAHQSGSAVKKHLSA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="8" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102669" stop="102992"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRMSNLFISLSIGLIVGIIIEGFVCNRSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRFGISVILVEISCDQWSDYVPN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="9">
          <exon_coordinates>
            <exon e_start="102225" e_stop="103345"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102225" e_stop="103345" e_length="1121"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102225" stop="102791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102862" stop="103345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302125" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="9" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAGTACAGAACCCCAATTCCAAATCTCTCATCTTCATCGGCTCACTGCCACTGTTACCTCAGTGCCGGCGGTGGACTCTCCGGTAAAGATTTTTCCGATCTCATACTCCTCTTCTCTGCTCCTATTTATTCCAATCATGAATAATTTCTACGTTCGTTTTTGATGCTCGTATTTTTCTTTAGCAGAAAAATTTAGTGAATTCTTTACAGGTTAAGTACTTGATGGTATTTCTTAGCTGGACGCGTCCATCTCCTGAAGAGCAGAAAGCATGTATCAACAAGTAAAGAATGCCCAGAACTTGTTACTGGCTTCGTTCCAATTTATTTGTCTTATCTTGCTTTTTAATCCGTTTACCAGAGATTCTAGACCGCTACATCGTTTTGGGACACTCTACGTATGTTTATTTTAAGATTAAACTCTGTGTCAACTCAACAAATTGAAATAGAATGAGTAATTTATTTATTTCCCTTTCTATTGGTTTAATTGTGGGAATCATTATTGAGGGTTTCGTCTGTAACAGGTCTGGTTCCTTTAACTATGATAAAAGATTTAGAGGAACTACTGAGAAACCTGCTCCTCTACTTAAGCAAGACAGTGAGCTTGCAAAGGATGGTTTCTCTGTTAATTGTGCTCGAGTATTAGTCGGTTCAGGCCGTGAGACTTTTGAAAAGGGAAAAGCTGCCCTTCAAAATTGGAGGTTTGGTATATCAGTTATTCTTGTAGAAATATCATGCGATCAATGGTCTGATTATGTACCAAACTAACTTTGCAGGCATTTTGGATTGAATTGGGCGTTTGTTGATCCAAAAGCTCAAATTCAAAGTGGGACAAAGTTCTGTGTTTGTGTGAAGGAGTTCTTCCCGTGGCTTATGATGCCTCTACAGGTTGTTTATGTTAGCGAGAACAAGAACTCGAAAAAGGGGGCTTCGTTTAGTTTTGGCAGTGGAACTCTGCAAGGACATTTGCTGGTCAGTTTGCTCTCCTTGTTGCAATTGTTTGTCTTACACTATACCTTTCAACTGTTCAGGTTTTCTGGTTATGATATCATTAGGTTCATTTCAATCTAGCTATATAAAATAAACATTAAGGATTTAAGATTATGTTTCCTTTACAAGCT</gDNA_template>
            <first_frame> *  S  V  Q  N  P  N  S  K  S  L  I  F  I  G  S  L  P  L  L  P  Q  C  R  R  W  T  L  R  *  R  F  F  R  S  H  T  P  L  L  C  S  Y  L  F  Q  S  *  I  I  S  T  F  V  F  D  A  R  I  F  L  *  Q  K  N  L  V  N  S  L  Q  V  K  Y  L  M  V  F  L  S  W  T  R  P  S  P  E  E  Q  K  A  C  I  N  K  *  R  M  P  R  T  C  Y  W  L  R  S  N  L  F  V  L  S  C  F  L  I  R  L  P  E  I  L  D  R  Y  I  V  L  G  H  S  T  Y  V  Y  F  K  I  K  L  C  V  N  S  T  N  *  N  R  M  S  N  L  F  I  S  L  S  I  G  L  I  V  G  I  I  I  E  G  F  V  C  N  R  S  G  S  F  N  Y  D  K  R  F  R  G  T  T  E  K  P  A  P  L  L  K  Q  D  S  E  L  A  K  D  G  F  S  V  N  C  A  R  V  L  V  G  S  G  R  E  T  F  E  K  G  K  A  A  L  Q  N  W  R  F  G  I  S  V  I  L  V  E  I  S  C  D  Q  W  S  D  Y  V  P  N  *  L  C  R  H  F  G  L  N  W  A  F  V  D  P  K  A  Q  I  Q  S  G  T  K  F  C  V  C  V  K  E  F  F  P  W  L  M  M  P  L  Q  V  V  Y  V  S  E  N  K  N  S  K  K  G  A  S  F  S  F  G  S  G  T  L  Q  G  H  L  L  V  S  L  L  S  L  L  Q  L  F  V  L  H  Y  T  F  Q  L  F  R  F  S  G  Y  D  I  I  R  F  I  S  I  *  L  Y  K  I  N  I  K  D  L  R  L  C  F  L  Y  K   </first_frame>
            <second_frame>  N  Q  Y  R  T  P  I  P  N  L  S  S  S  S  A  H  C  H  C  Y  L  S  A  G  G  G  L  S  G  K  D  F  S  D  L  I  L  L  F  S  A  P  I  Y  S  N  H  E  *  F  L  R  S  F  L  M  L  V  F  F  F  S  R  K  I  *  *  I  L  Y  R  L  S  T  *  W  Y  F  L  A  G  R  V  H  L  L  K  S  R  K  H  V  S  T  S  K  E  C  P  E  L  V  T  G  F  V  P  I  Y  L  S  Y  L  A  F  *  S  V  Y  Q  R  F  *  T  A  T  S  F  W  D  T  L  R  M  F  I  L  R  L  N  S  V  S  T  Q  Q  I  E  I  E  *  V  I  Y  L  F  P  F  L  L  V  *  L  W  E  S  L  L  R  V  S  S  V  T  G  L  V  P  L  T  M  I  K  D  L  E  E  L  L  R  N  L  L  L  Y  L  S  K  T  V  S  L  Q  R  M  V  S  L  L  I  V  L  E  Y  *  S  V  Q  A  V  R  L  L  K  R  E  K  L  P  F  K  I  G  G  L  V  Y  Q  L  F  L  *  K  Y  H  A  I  N  G  L  I  M  Y  Q  T  N  F  A  G  I  L  D  *  I  G  R  L  L  I  Q  K  L  K  F  K  V  G  Q  S  S  V  F  V  *  R  S  S  S  R  G  L  *  C  L  Y  R  L  F  M  L  A  R  T  R  T  R  K  R  G  L  R  L  V  L  A  V  E  L  C  K  D  I  C  W  S  V  C  S  P  C  C  N  C  L  S  Y  T  I  P  F  N  C  S  G  F  L  V  M  I  S  L  G  S  F  Q  S  S  Y  I  K  *  T  L  R  I  *  D  Y  V  S  F  T  S  </second_frame>
            <third_frame>   I  S  T  E  P  Q  F  Q  I  S  H  L  H  R  L  T  A  T  V  T  S  V  P  A  V  D  S  P  V  K  I  F  P  I  S  Y  S  S  S  L  L  L  F  I  P  I  M  N  N  F  Y  V  R  F  *  C  S  Y  F  S  L  A  E  K  F  S  E  F  F  T  G  *  V  L  D  G  I  S  *  L  D  A  S  I  S  *  R  A  E  S  M  Y  Q  Q  V  K  N  A  Q  N  L  L  L  A  S  F  Q  F  I  C  L  I  L  L  F  N  P  F  T  R  D  S  R  P  L  H  R  F  G  T  L  Y  V  C  L  F  *  D  *  T  L  C  Q  L  N  K  L  K  *  N  E  *  F  I  Y  F  P  F  Y  W  F  N  C  G  N  H  Y  *  G  F  R  L  *  Q  V  W  F  L  *  L  *  *  K  I  *  R  N  Y  *  E  T  C  S  S  T  *  A  R  Q  *  A  C  K  G  W  F  L  C  *  L  C  S  S  I  S  R  F  R  P  *  D  F  *  K  G  K  S  C  P  S  K  L  E  V  W  Y  I  S  Y  S  C  R  N  I  M  R  S  M  V  *  L  C  T  K  L  T  L  Q  A  F  W  I  E  L  G  V  C  *  S  K  S  S  N  S  K  W  D  K  V  L  C  L  C  E  G  V  L  P  V  A  Y  D  A  S  T  G  C  L  C  *  R  E  Q  E  L  E  K  G  G  F  V  *  F  W  Q  W  N  S  A  R  T  F  A  G  Q  F  A  L  L  V  A  I  V  C  L  T  L  Y  L  S  T  V  Q  V  F  W  L  *  Y  H  *  V  H  F  N  L  A  I  *  N  K  H  *  G  F  K  I  M  F  P  L  Q  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="9" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102669" stop="102992"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRMSNLFISLSIGLIVGIIIEGFVCNRSGSFNYDKRFRGTTEKPAPLLKQDSELAKDGFSVNCARVLVGSGRETFEKGKAALQNWRFGISVILVEISCDQWSDYVPN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="9" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102993" stop="103295"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCRHFGLNWAFVDPKAQIQSGTKFCVCVKEFFPWLMMPLQVVYVSENKNSKKGASFSFGSGTLQGHLLVSLLSLLQLFVLHYTFQLFRFSGYDIIRFISI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="109726" PGL_stop="110047"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109726" e_stop="110047"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="109726" e_stop="110047" e_length="322"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109726" stop="110047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109726" stop="110030"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAAAAATTATATTTCACTGTAATTGTATAATTCACAATTGTATAATTCTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAATAGAAATTATACACTTCTGTGTATAAAGCGAGAGAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  R  Y  M  F  F  S  L  Y  T  K  T  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  L  Y  F  T  V  I  V  *  F  T  I  V  *  F  F  G  L  F  L  C  N  I  *  S  K  M  F  V  N  Y  I  I  K  C  I  T  R  R  Y  T  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  I  E  I  I  H  F  C  V  *  S  E  R  </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  Q  E  D  I  C  F  S  R  F  I  Q  K  Q  K  H  N  I  Y  T  S  V  V  *  S  *  K  N  Y  I  S  L  *  L  Y  N  S  Q  L  Y  N  S  L  A  F  F  S  A  I  F  E  V  K  C  L  *  I  I  *  L  S  V  *  H  E  D  I  H  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  *  K  L  Y  T  S  V  Y  K  A  R  E </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  L  A  L  Y  K  N  R  N  T  I  Y  T  L  L  L  Y  K  A  R  K  I  I  F  H  C  N  C  I  I  H  N  C  I  I  L  W  P  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  R  N  R  N  Y  T  L  L  C  I  K  R  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="111504" PGL_stop="111182"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111504" e_stop="111182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="111504" e_stop="111182" e_length="323"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111504" stop="111182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111504" stop="111199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATGTATGTATATTGCATAATTATAAGTGTATAGCAAGAAGATATATGTTTTTCTCGCTTTATACAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAACTAGAAAAAATTGTATTTCACTGCAATGGTATAATTCACAATTGTATAATTTTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATATATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAGCAGAAATTATACACTTCTGTGTATAAAGCGAGAGAG</gDNA_template>
            <first_frame> *  N  V  C  I  L  H  N  Y  K  C  I  A  R  R  Y  M  F  F  S  L  Y  T  K  T  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  I  V  F  H  C  N  G  I  I  H  N  C  I  I  F  W  P  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  R  S  R  N  Y  T  L  L  C  I  K  R  E   </first_frame>
            <second_frame>  K  M  Y  V  Y  C  I  I  I  S  V  *  Q  E  D  I  C  F  S  R  F  I  Q  K  Q  K  H  N  I  Y  T  S  V  V  *  N  *  K  K  L  Y  F  T  A  M  V  *  F  T  I  V  *  F  F  G  L  F  L  C  N  I  *  S  K  M  F  V  N  Y  I  I  K  C  I  T  R  R  Y  I  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  A  E  I  I  H  F  C  V  *  S  E  R  </second_frame>
            <third_frame>   K  C  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  L  A  L  Y  K  N  R  N  T  I  Y  T  L  L  L  Y  K  T  R  K  N  C  I  S  L  Q  W  Y  N  S  Q  L  Y  N  F  L  A  F  F  S  A  I  F  E  V  K  C  L  *  I  I  *  L  S  V  *  H  E  D  I  Y  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  K  L  Y  T  S  V  Y  K  A  R  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0060J03.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="120082" PGL_stop="126264"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120082" e_stop="120361"/>
            <exon e_start="120457" e_stop="120571"/>
            <exon e_start="121171" e_stop="121245"/>
            <exon e_start="121363" e_stop="121434"/>
            <exon e_start="121596" e_stop="121733"/>
            <exon e_start="122907" e_stop="122940"/>
            <exon e_start="123461" e_stop="123570"/>
            <exon e_start="124328" e_stop="124417"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.641" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.324" e_score="0.993"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.810" e_score="0.991"/>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="120082" e_stop="120361" e_length="280"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="120362" i_stop="120456" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="120457" e_stop="120571" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="0.977" acc_prob="0.641">
            <gDNA_intron_boundary i_start="120572" i_stop="121170" i_length="599"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="121171" e_stop="121245" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="121246" i_stop="121362" i_length="117"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="121363" e_stop="121434" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.000">
            <gDNA_intron_boundary i_start="121435" i_stop="121595" i_length="161"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="121596" e_stop="121733" e_length="138"/>
          </exon>
          <intron i_serial="5" don_prob="0.970" acc_prob="0.324">
            <gDNA_intron_boundary i_start="121734" i_stop="122906" i_length="1173"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="122907" e_stop="122940" e_length="34"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="122941" i_stop="123460" i_length="520"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="123461" e_stop="123570" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="0.967" acc_prob="0.810">
            <gDNA_intron_boundary i_start="123571" i_stop="124327" i_length="757"/>
          </intron>
          <exon e_serial="8" e_score="0.911">
            <gDNA_exon_boundary e_start="124328" e_stop="124417" e_length="90"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120082" stop="120361"/>
              <exon start="120457" stop="120571"/>
              <exon start="121171" stop="121228"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272965" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120103" stop="120361"/>
              <exon start="120457" stop="120571"/>
              <exon start="121171" stop="121245"/>
              <exon start="121363" stop="121434"/>
              <exon start="121596" stop="121733"/>
              <exon start="122907" stop="122940"/>
              <exon start="123461" stop="123570"/>
              <exon start="124328" stop="124417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120110" stop="120361"/>
              <exon start="120457" stop="120571"/>
              <exon start="121171" stop="121245"/>
              <exon start="121363" stop="121434"/>
              <exon start="121596" stop="121657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120144" stop="120361"/>
              <exon start="120457" stop="120571"/>
              <exon start="121171" stop="121245"/>
              <exon start="121363" stop="121382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120144" stop="120361"/>
              <exon start="120457" stop="120571"/>
              <exon start="121171" stop="121240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319328" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGCAAATTCTGGACCGAACCCAAAGTCTTTCTCTCTCTACATTATCTCTCTAGATTTGTTGTTTTCAAGTTTCAACTCTGCGGTTAGTTCAGACTAAACTGAAGAACACTTGTATACTCGGAGACGGCGAGGAATGTGTATTGAGAAACAAGTGTTTTCTAGTGAATGAATTTTTCGAAGAAGGTGAAATGGGAGCATTATGCGCTGGCCACTCTCGGGACACCTTGGATCGTTTCTCCGACCGTTGTCTCCACGTTTTCCCATGTCTCTCCGATCCCG : CTCGGAGATCCACTTGTTGCTTGAGAATAGCGTTGGTGATGCTGCACTTGATCTATCTGGGCGTTCTATTTGTCTTTGACAAAGATTTGATTCATAAAACTAAAGAAGAGCCATG : GTACACAACTGTCTATTTGATCCTGTTTGCTGCTACACTGGCTCAATACTTCATCACTTCAGGTTCTTCTCCTGG : CTATGTTGTTGATGCAATGAGGGCTGTCAATGAGGCAGATGCATCATGTAATAGGGCATCAATTACCTCAAA : ACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACCGGAACCAGTTGGGAAGTTATCTTCAAGGCCGTGGTATGATAGCATGGACAAAGCTAGTGATGGATATGTATCCCAGTGGAACATCTCTTAG : AGGTGTGACTTGCAGTTACTGTAATGTTGTGCAG : CCTCCACGCGCTAAACATTGTCATGATTGTGACAAATGTGTTCTTCAATTTGATCATCATTGTGTTTGGCTTGGCACATGCATAGGACAGGGTAATCATTGCGCTTTTTG : GTGGTACATTTGTGGAGAAACAGCCTTATCCCTTTGGACGGGCACGTTATATATTCAATTTTTGAAGTCTGATATATATTCAAAGCCTTG</gDNA_template>
            <first_frame> G  Q  I  L  D  R  T  Q  S  L  S  L  S  T  L  S  L  *  I  C  C  F  Q  V  S  T  L  R  L  V  Q  T  K  L  K  N  T  C  I  L  G  D  G  E  E  C  V  L  R  N  K  C  F  L  V  N  E  F  F  E  E  G  E  M  G  A  L  C  A  G  H  S  R  D  T  L  D  R  F  S  D  R  C  L  H  V  F  P  C  L  S  D  P   : A  R  R  S  T  C  C  L  R  I  A  L  V  M  L  H  L  I  Y  L  G  V  L  F  V  F  D  K  D  L  I  H  K  T  K  E  E  P  W :   Y  T  T  V  Y  L  I  L  F  A  A  T  L  A  Q  Y  F  I  T  S  G  S  S  P  G :   Y  V  V  D  A  M  R  A  V  N  E  A  D  A  S  C  N  R  A  S  I  T  S  K :   Q  P  A  S  S  K  N  G  D  V  V  I  A  I  D  R  N  Q  L  G  S  Y  L  Q  G  R  G  M  I  A  W  T  K  L  V  M  D  M  Y  P  S  G  T  S  L  R :   G  V  T  C  S  Y  C  N  V  V  Q  :  P  P  R  A  K  H  C  H  D  C  D  K  C  V  L  Q  F  D  H  H  C  V  W  L  G  T  C  I  G  Q  G  N  H  C  A  F  W :   W  Y  I  C  G  E  T  A  L  S  L  W  T  G  T  L  Y  I  Q  F  L  K  S  D  I  Y  S  K  P   </first_frame>
            <second_frame>  G  K  F  W  T  E  P  K  V  F  L  S  L  H  Y  L  S  R  F  V  V  F  K  F  Q  L  C  G  *  F  R  L  N  *  R  T  L  V  Y  S  E  T  A  R  N  V  Y  *  E  T  S  V  F  *  *  M  N  F  S  K  K  V  K  W  E  H  Y  A  L  A  T  L  G  T  P  W  I  V  S  P  T  V  V  S  T  F  S  H  V  S  P  I  P  :  L  G  D  P  L  V  A  *  E  *  R  W  *  C  C  T  *  S  I  W  A  F  Y  L  S  L  T  K  I  *  F  I  K  L  K  K  S  H   : G  T  Q  L  S  I  *  S  C  L  L  L  H  W  L  N  T  S  S  L  Q  V  L  L  L   : A  M  L  L  M  Q  *  G  L  S  M  R  Q  M  H  H  V  I  G  H  Q  L  P  Q   : N  S  L  L  Q  A  K  T  A  M  *  L  L  Q  S  T  G  T  S  W  E  V  I  F  K  A  V  V  *  *  H  G  Q  S  *  *  W  I  C  I  P  V  E  H  L  L   : E  V  *  L  A  V  T  V  M  L  C  S :   L  H  A  L  N  I  V  M  I  V  T  N  V  F  F  N  L  I  I  I  V  F  G  L  A  H  A  *  D  R  V  I  I  A  L  F   : G  G  T  F  V  E  K  Q  P  Y  P  F  G  R  A  R  Y  I  F  N  F  *  S  L  I  Y  I  Q  S  L  </second_frame>
            <third_frame>   A  N  S  G  P  N  P  K  S  F  S  L  Y  I  I  S  L  D  L  L  F  S  S  F  N  S  A  V  S  S  D  *  T  E  E  H  L  Y  T  R  R  R  R  G  M  C  I  E  K  Q  V  F  S  S  E  *  I  F  R  R  R  *  N  G  S  I  M  R  W  P  L  S  G  H  L  G  S  F  L  R  P  L  S  P  R  F  P  M  S  L  R  S  R :   S  E  I  H  L  L  L  E  N  S  V  G  D  A  A  L  D  L  S  G  R  S  I  C  L  *  Q  R  F  D  S  *  N  *  R  R  A  M  :  V  H  N  C  L  F  D  P  V  C  C  Y  T  G  S  I  L  H  H  F  R  F  F  S  W  :  L  C  C  *  C  N  E  G  C  Q  *  G  R  C  I  M  *  *  G  I  N  Y  L  K  :  T  A  C  F  K  Q  K  R  R  C  S  Y  C  N  R  P  E  P  V  G  K  L  S  S  R  P  W  Y  D  S  M  D  K  A  S  D  G  Y  V  S  Q  W  N  I  S  *  :  R  C  D  L  Q  L  L  *  C  C  A   : A  S  T  R  *  T  L  S  *  L  *  Q  M  C  S  S  I  *  S  S  L  C  L  A  W  H  M  H  R  T  G  *  S  L  R  F  L  :  V  V  H  L  W  R  N  S  L  I  P  L  D  G  H  V  I  Y  S  I  F  E  V  *  Y  I  F  K  A  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120136" stop="120361"/>
                    <exon start="120457" stop="120571"/>
                    <exon start="121171" stop="121245"/>
                    <exon start="121363" stop="121434"/>
                    <exon start="121596" stop="121733"/>
                    <exon start="122907" stop="122940"/>
                    <exon start="123461" stop="123570"/>
                    <exon start="124328" stop="124415"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>858</number_coding_nucleotides>
                  <number_encoded_amino_acids>286</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICCFQVSTLRLVQTKLKNTCILGDGEECVLRNKCFLVNEFFEEGEMGALCAGHSRDTLDRFSDRCLHVFPCLSDPARRSTCCLRIALVMLHLIYLGVLFVFDKDLIHKTKEEPWYTTVYLILFAATLAQYFITSGSSPGYVVDAMRAVNEADASCNRASITSKQPASSKNGDVVIAIDRNQLGSYLQGRGMIAWTKLVMDMYPSGTSLRGVTCSYCNVVQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCAFWWYICGETALSLWTGTLYIQFLKSDIYSKP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="121572" e_stop="121733"/>
            <exon e_start="122907" e_stop="122940"/>
            <exon e_start="123461" e_stop="123570"/>
            <exon e_start="124328" e_stop="124417"/>
            <exon e_start="125318" e_stop="125401"/>
            <exon e_start="125794" e_stop="125859"/>
            <exon e_start="126101" e_stop="126264"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.324" e_score="0.957"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.810" e_score="0.991"/>
          <exon-intron don_prob="0.000" acc_prob="0.986" e_score="0.956"/>
          <exon-intron don_prob="0.957" acc_prob="0.986" e_score="0.988"/>
          <exon-intron don_prob="0.990" acc_prob="0.992" e_score="0.955"/>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="121572" e_stop="121733" e_length="162"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.324">
            <gDNA_intron_boundary i_start="121734" i_stop="122906" i_length="1173"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="122907" e_stop="122940" e_length="34"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="122941" i_stop="123460" i_length="520"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="123461" e_stop="123570" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="0.967" acc_prob="0.810">
            <gDNA_intron_boundary i_start="123571" i_stop="124327" i_length="757"/>
          </intron>
          <exon e_serial="4" e_score="0.956">
            <gDNA_exon_boundary e_start="124328" e_stop="124417" e_length="90"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="124418" i_stop="125317" i_length="900"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="125318" e_stop="125401" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.957" acc_prob="0.986">
            <gDNA_intron_boundary i_start="125402" i_stop="125793" i_length="392"/>
          </intron>
          <exon e_serial="6" e_score="0.955">
            <gDNA_exon_boundary e_start="125794" e_stop="125859" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.992">
            <gDNA_intron_boundary i_start="125860" i_stop="126100" i_length="241"/>
          </intron>
          <exon e_serial="7" e_score="0.963">
            <gDNA_exon_boundary e_start="126101" e_stop="126264" e_length="164"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121572" stop="121733"/>
              <exon start="122907" stop="122940"/>
              <exon start="123461" stop="123570"/>
              <exon start="124328" stop="124417"/>
              <exon start="125318" stop="125401"/>
              <exon start="125794" stop="125859"/>
              <exon start="126101" stop="126264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560278" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGATGTAAAATGATCAAGCAAAGACAGCCTGCTTCAAGCAAAAACGGCGATGTAGTTATTGCAATCGACCGGAACCAGTTGGGAAGTTATCTTCAAGGCCGTGGTATGATAGCATGGACAAAGCTAGTGATGGATATGTATCCCAGTGGAACATCTCTTAG : AGGTGTGACTTGCAGTTACTGTAATGTTGTGCAG : CCTCCACGCGCTAAACATTGTCATGATTGTGACAAATGTGTTCTTCAATTTGATCATCATTGTGTTTGGCTTGGCACATGCATAGGACAGGGTAATCATTGCGCTTTTTG : GTGGTACATTTGTGGAGAAACAGCCTTATCCCTTTGGACGGGCACGTTATATATTCAATTTTTGAAGTCTGATATATATTCAAAGCCTTG : GTGGTTATATGCAATTATGATCTTGCTGCTAGCTACTCTGTTTTTCTGCCTCATCTTCCTTCTCCTCCTCCTACTTTTTCATAG : CTATCTAATTTTGACAAATCAGACCACATATGAGCTTGTGAGACGACGGCGCATCCAGTATTTGAG : GAACATTCCTGAAAGAGTGTATCCATTTAGTAACGGAGCATGCAGAAACTTGTATGAGTTTTGCTGTGCCCAGCGTAGCAAATATAGGATGGAACCGCTGCCAACAGGACAAGAACTTGAAGATAAGTTGAGACCCTACACATGCTCAGATGTTTTATCCTGTC</gDNA_template>
            <first_frame> V  M  *  N  D  Q  A  K  T  A  C  F  K  Q  K  R  R  C  S  Y  C  N  R  P  E  P  V  G  K  L  S  S  R  P  W  Y  D  S  M  D  K  A  S  D  G  Y  V  S  Q  W  N  I  S  *  :  R  C  D  L  Q  L  L  *  C  C  A   : A  S  T  R  *  T  L  S  *  L  *  Q  M  C  S  S  I  *  S  S  L  C  L  A  W  H  M  H  R  T  G  *  S  L  R  F  L  :  V  V  H  L  W  R  N  S  L  I  P  L  D  G  H  V  I  Y  S  I  F  E  V  *  Y  I  F  K  A  L  :  V  V  I  C  N  Y  D  L  A  A  S  Y  S  V  F  L  P  H  L  P  S  P  P  P  T  F  S  *  :  L  S  N  F  D  K  S  D  H  I  *  A  C  E  T  T  A  H  P  V  F  E  :  E  H  S  *  K  S  V  S  I  *  *  R  S  M  Q  K  L  V  *  V  L  L  C  P  A  *  Q  I  *  D  G  T  A  A  N  R  T  R  T  *  R  *  V  E  T  L  H  M  L  R  C  F  I  L   </first_frame>
            <second_frame>  *  C  K  M  I  K  Q  R  Q  P  A  S  S  K  N  G  D  V  V  I  A  I  D  R  N  Q  L  G  S  Y  L  Q  G  R  G  M  I  A  W  T  K  L  V  M  D  M  Y  P  S  G  T  S  L  R :   G  V  T  C  S  Y  C  N  V  V  Q  :  P  P  R  A  K  H  C  H  D  C  D  K  C  V  L  Q  F  D  H  H  C  V  W  L  G  T  C  I  G  Q  G  N  H  C  A  F  W :   W  Y  I  C  G  E  T  A  L  S  L  W  T  G  T  L  Y  I  Q  F  L  K  S  D  I  Y  S  K  P  W :   W  L  Y  A  I  M  I  L  L  L  A  T  L  F  F  C  L  I  F  L  L  L  L  L  L  F  H  S :   Y  L  I  L  T  N  Q  T  T  Y  E  L  V  R  R  R  R  I  Q  Y  L  R :   N  I  P  E  R  V  Y  P  F  S  N  G  A  C  R  N  L  Y  E  F  C  C  A  Q  R  S  K  Y  R  M  E  P  L  P  T  G  Q  E  L  E  D  K  L  R  P  Y  T  C  S  D  V  L  S  C  </second_frame>
            <third_frame>   D  V  K  *  S  S  K  D  S  L  L  Q  A  K  T  A  M  *  L  L  Q  S  T  G  T  S  W  E  V  I  F  K  A  V  V  *  *  H  G  Q  S  *  *  W  I  C  I  P  V  E  H  L  L   : E  V  *  L  A  V  T  V  M  L  C  S :   L  H  A  L  N  I  V  M  I  V  T  N  V  F  F  N  L  I  I  I  V  F  G  L  A  H  A  *  D  R  V  I  I  A  L  F   : G  G  T  F  V  E  K  Q  P  Y  P  F  G  R  A  R  Y  I  F  N  F  *  S  L  I  Y  I  Q  S  L   : G  G  Y  M  Q  L  *  S  C  C  *  L  L  C  F  S  A  S  S  S  F  S  S  S  Y  F  F  I   : A  I  *  F  *  Q  I  R  P  H  M  S  L  *  D  D  G  A  S  S  I  *   : G  T  F  L  K  E  C  I  H  L  V  T  E  H  A  E  T  C  M  S  F  A  V  P  S  V  A  N  I  G  W  N  R  C  Q  Q  D  K  N  L  K  I  S  *  D  P  T  H  A  Q  M  F  Y  P  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121576" stop="121733"/>
                    <exon start="122907" stop="122940"/>
                    <exon start="123461" stop="123570"/>
                    <exon start="124328" stop="124417"/>
                    <exon start="125318" stop="125401"/>
                    <exon start="125794" stop="125859"/>
                    <exon start="126101" stop="126263"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>705</number_coding_nucleotides>
                  <number_encoded_amino_acids>235</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CKMIKQRQPASSKNGDVVIAIDRNQLGSYLQGRGMIAWTKLVMDMYPSGTSLRGVTCSYCNVVQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCAFWWYICGETALSLWTGTLYIQFLKSDIYSKPWWLYAIMILLLATLFFCLIFLLLLLLFHSYLILTNQTTYELVRRRRIQYLRNIPERVYPFSNGACRNLYEFCCAQRSKYRMEPLPTGQELEDKLRPYTCSDVLSC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="132482" PGL_stop="127130"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="132482" e_stop="132180"/>
            <exon e_start="132088" e_stop="131771"/>
            <exon e_start="131638" e_stop="131597"/>
            <exon e_start="130964" e_stop="130840"/>
            <exon e_start="130709" e_stop="130562"/>
            <exon e_start="129572" e_stop="129500"/>
            <exon e_start="128980" e_stop="128868"/>
            <exon e_start="128776" e_stop="128657"/>
            <exon e_start="128417" e_stop="128262"/>
            <exon e_start="128175" e_stop="127833"/>
            <exon e_start="127140" e_stop="127130"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.931" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.906" e_score="0.997"/>
          <exon-intron don_prob="0.862" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.848" acc_prob="0.905" e_score="0.991"/>
          <exon-intron don_prob="0.550" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.698" acc_prob="0.000" e_score="0.997"/>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="132482" e_stop="132180" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="0.931" acc_prob="0.915">
            <gDNA_intron_boundary i_start="132179" i_stop="132089" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="132088" e_stop="131771" e_length="318"/>
          </exon>
          <intron i_serial="2" don_prob="0.971" acc_prob="0.906">
            <gDNA_intron_boundary i_start="131770" i_stop="131639" i_length="132"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="131638" e_stop="131597" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.862" acc_prob="0.987">
            <gDNA_intron_boundary i_start="131596" i_stop="130965" i_length="632"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="130964" e_stop="130840" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="130839" i_stop="130710" i_length="130"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="130709" e_stop="130562" e_length="148"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="130561" i_stop="129573" i_length="989"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="129572" e_stop="129500" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.967" acc_prob="1.000">
            <gDNA_intron_boundary i_start="129499" i_stop="128981" i_length="519"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="128980" e_stop="128868" e_length="113"/>
          </exon>
          <intron i_serial="7" don_prob="0.848" acc_prob="0.905">
            <gDNA_intron_boundary i_start="128867" i_stop="128777" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="128776" e_stop="128657" e_length="120"/>
          </exon>
          <intron i_serial="8" don_prob="0.550" acc_prob="0.935">
            <gDNA_intron_boundary i_start="128656" i_stop="128418" i_length="239"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="128417" e_stop="128262" e_length="156"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="128261" i_stop="128176" i_length="86"/>
          </intron>
          <exon e_serial="10" e_score="0.997">
            <gDNA_exon_boundary e_start="128175" e_stop="127833" e_length="343"/>
          </exon>
          <intron i_serial="10" don_prob="0.698" acc_prob="0.000">
            <gDNA_intron_boundary i_start="127832" i_stop="127141" i_length="692"/>
          </intron>
          <exon e_serial="11" e_score="0.909">
            <gDNA_exon_boundary e_start="127140" e_stop="127130" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132482" stop="132180"/>
              <exon start="132088" stop="131776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132402" stop="132180"/>
              <exon start="132088" stop="131771"/>
              <exon start="131638" stop="131597"/>
              <exon start="130964" stop="130905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131615" stop="131597"/>
              <exon start="130964" stop="130840"/>
              <exon start="130709" stop="130562"/>
              <exon start="129572" stop="129500"/>
              <exon start="128980" stop="128868"/>
              <exon start="128776" stop="128657"/>
              <exon start="128417" stop="128339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131615" stop="131597"/>
              <exon start="130964" stop="130840"/>
              <exon start="130709" stop="130562"/>
              <exon start="129572" stop="129500"/>
              <exon start="128980" stop="128868"/>
              <exon start="128776" stop="128657"/>
              <exon start="128417" stop="128374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131615" stop="131597"/>
              <exon start="130964" stop="130840"/>
              <exon start="130709" stop="130562"/>
              <exon start="129572" stop="129500"/>
              <exon start="128980" stop="128868"/>
              <exon start="128776" stop="128667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293957" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130964" stop="130840"/>
              <exon start="130709" stop="130562"/>
              <exon start="129572" stop="129500"/>
              <exon start="128980" stop="128868"/>
              <exon start="128776" stop="128657"/>
              <exon start="128417" stop="128334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378400" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128945" stop="128868"/>
              <exon start="128776" stop="128657"/>
              <exon start="128417" stop="128262"/>
              <exon start="128175" stop="127833"/>
              <exon start="127140" stop="127130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128907" stop="128868"/>
              <exon start="128776" stop="128657"/>
              <exon start="128417" stop="128262"/>
              <exon start="128175" stop="127833"/>
              <exon start="127140" stop="127130"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372927" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128875" stop="128868"/>
              <exon start="128776" stop="128657"/>
              <exon start="128417" stop="128262"/>
              <exon start="128175" stop="127833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413330" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAGTGGTGATGCTTGTGATATTTTAGAAGTCCTTGCAGAAAATTGTAATGGTAGTGTAACTGAGCATGGGCTTGAAACTCATTCAGAGAAATATCCAGAAGAATCCAGTGGAATTGGGTACCGAGGGCAGAATCCAACTATTGAGCGTGCTATGAATGGTAAGAGAATTTCACAAAGAGATGAAAGCAAGTGGGTCCAGGTCCGAAAAGGCACTAAAATAATTGTGCAAGTTGTTAAAGAAGGATTGGGTACGAAGGGCCCAACACTGACTGCTTATCCGAAATTAAGGAGCAGATTCTGG : GTTTTAGTTCCTCGCGGCAACACGATAGGTATTTCAAAGAAGATTGCTGGTGTTGAGCGCACACGTTTAAGGGTCATTGCAAAAACTTTACAGCCTCAAGGATATGGTCTTACAGTAAGGACAGTTGCAGCTGGTCATTCACTAAATGAATTGCAGAAGGACTTGGAAGGGTTGCTTTCAACTTGGAAAAGTATAATTGAGCATGCAAAGTCTGCAGCTCTTGCCGCAGATGAAGGTGTTGATGGAGCAGTTCCTGTCATGCTTCACCAGGCAATGGGCCAAACACTTTCTGTTGTTCAAGATTATTTTAGCGATAAG : GTGAATAGTTTGGTGGTTGATTCTCCAAGGACATATCATGAG : GTTACAAACTATCTTCAAGAAATGGCACCTAATCTTTGTGAAAGAGTTGAGTTGCATGGTACAAGAACTCCCCTGTTTGATGAATACAACATTGAGGAAGAAATAAACAACATTCTCAGCAAAAG : GGTTCCCCTTGATAATGGAGGTTATTTAGTGATCGAACAGACAGAGGCTTTAGTCTCCATCGATGTAAATGGTGGACATTGTGTGCTTGGTCAAGGGACTTCACAAGAGATGGCTATTCTCAATGTTAACCTTGCAGCTGCTAGACAG : ATTGCTAGGGAAATAAGGCTGAGAGACATTGGTGGCATTATTGTGGTGGATTTCATAGATATGTTGGATGATT : CAAATAAGAGATTGGTCTATGAGGAGGTCAAGAAGGCTGTTGAGAGAGATCGATCAACAGTTAAGGTGTCTGAATTGTCCAGACATGGGCTTATGGAGATTACCAGGAAAAGA : GTTCGACCTAGTGTGACATTCATGATCAGTGAACCATGTATGTGCTGCCATGGTACGGGGAGAGTGGAAGCTTTAGCGACTGCATACTCTAAGATTGAACGTGAAATTTGCCGGTTGCTA : TCCACAACGGATCTGAAGGCAGACCCTGAAAACCCCAAGTCTTGGCCCAGATTTATTCTCAGGGTAGATCAGTACATGTCTAACTATTTAACTTCAGGAAAGAGGACAAGGCTAGCAATCTTGAGTAGTTCTCTCAAAGTTTGGCTTCTTCTAAAG : GTTGCTAGAGGTTTTACCAAAGGGACCTTTGAGCTAAAACCTTTAACAGGCGACAAGGAGTACAAGGGTGATGAACGTGAAACATCTATTTCAGTGTTGCGACCAACAGAGGGTGGATTTCACCCCCCTCGGAAAAAAGTCACCATCTTCCCCATCAAAAAGTGGAGTAGTGGAAAGTGATGTTACCTCCATTAAGAATCATCTGTACAGGTCTCAAAAAACAATGCAAATCCACATATGGTTAGCATAAATTTATTAGCCAATTCTTTCTTCCCTCTTGAGTTTTTCTCGTCGGCTTGTAAGAAATAGCTAGTTTTATGAGGAAATCAATTTTGCATAGCAT : AAAAACAAAAA</gDNA_template>
            <first_frame> E  S  G  D  A  C  D  I  L  E  V  L  A  E  N  C  N  G  S  V  T  E  H  G  L  E  T  H  S  E  K  Y  P  E  E  S  S  G  I  G  Y  R  G  Q  N  P  T  I  E  R  A  M  N  G  K  R  I  S  Q  R  D  E  S  K  W  V  Q  V  R  K  G  T  K  I  I  V  Q  V  V  K  E  G  L  G  T  K  G  P  T  L  T  A  Y  P  K  L  R  S  R  F  W  :  V  L  V  P  R  G  N  T  I  G  I  S  K  K  I  A  G  V  E  R  T  R  L  R  V  I  A  K  T  L  Q  P  Q  G  Y  G  L  T  V  R  T  V  A  A  G  H  S  L  N  E  L  Q  K  D  L  E  G  L  L  S  T  W  K  S  I  I  E  H  A  K  S  A  A  L  A  A  D  E  G  V  D  G  A  V  P  V  M  L  H  Q  A  M  G  Q  T  L  S  V  V  Q  D  Y  F  S  D  K  :  V  N  S  L  V  V  D  S  P  R  T  Y  H  E  :  V  T  N  Y  L  Q  E  M  A  P  N  L  C  E  R  V  E  L  H  G  T  R  T  P  L  F  D  E  Y  N  I  E  E  E  I  N  N  I  L  S  K  R :   V  P  L  D  N  G  G  Y  L  V  I  E  Q  T  E  A  L  V  S  I  D  V  N  G  G  H  C  V  L  G  Q  G  T  S  Q  E  M  A  I  L  N  V  N  L  A  A  A  R  Q  :  I  A  R  E  I  R  L  R  D  I  G  G  I  I  V  V  D  F  I  D  M  L  D  D   : S  N  K  R  L  V  Y  E  E  V  K  K  A  V  E  R  D  R  S  T  V  K  V  S  E  L  S  R  H  G  L  M  E  I  T  R  K  R  :  V  R  P  S  V  T  F  M  I  S  E  P  C  M  C  C  H  G  T  G  R  V  E  A  L  A  T  A  Y  S  K  I  E  R  E  I  C  R  L  L  :  S  T  T  D  L  K  A  D  P  E  N  P  K  S  W  P  R  F  I  L  R  V  D  Q  Y  M  S  N  Y  L  T  S  G  K  R  T  R  L  A  I  L  S  S  S  L  K  V  W  L  L  L  K  :  V  A  R  G  F  T  K  G  T  F  E  L  K  P  L  T  G  D  K  E  Y  K  G  D  E  R  E  T  S  I  S  V  L  R  P  T  E  G  G  F  H  P  P  R  K  K  V  T  I  F  P  I  K  K  W  S  S  G  K  *  C  Y  L  H  *  E  S  S  V  Q  V  S  K  N  N  A  N  P  H  M  V  S  I  N  L  L  A  N  S  F  F  P  L  E  F  F  S  S  A  C  K  K  *  L  V  L  *  G  N  Q  F  C  I  A   : *  K  Q  K </first_frame>
            <second_frame>  K  V  V  M  L  V  I  F  *  K  S  L  Q  K  I  V  M  V  V  *  L  S  M  G  L  K  L  I  Q  R  N  I  Q  K  N  P  V  E  L  G  T  E  G  R  I  Q  L  L  S  V  L  *  M  V  R  E  F  H  K  E  M  K  A  S  G  S  R  S  E  K  A  L  K  *  L  C  K  L  L  K  K  D  W  V  R  R  A  Q  H  *  L  L  I  R  N  *  G  A  D  S  G :   F  *  F  L  A  A  T  R  *  V  F  Q  R  R  L  L  V  L  S  A  H  V  *  G  S  L  Q  K  L  Y  S  L  K  D  M  V  L  Q  *  G  Q  L  Q  L  V  I  H  *  M  N  C  R  R  T  W  K  G  C  F  Q  L  G  K  V  *  L  S  M  Q  S  L  Q  L  L  P  Q  M  K  V  L  M  E  Q  F  L  S  C  F  T  R  Q  W  A  K  H  F  L  L  F  K  I  I  L  A  I  R :   *  I  V  W  W  L  I  L  Q  G  H  I  M  R :   L  Q  T  I  F  K  K  W  H  L  I  F  V  K  E  L  S  C  M  V  Q  E  L  P  C  L  M  N  T  T  L  R  K  K  *  T  T  F  S  A  K   : G  F  P  L  I  M  E  V  I  *  *  S  N  R  Q  R  L  *  S  P  S  M  *  M  V  D  I  V  C  L  V  K  G  L  H  K  R  W  L  F  S  M  L  T  L  Q  L  L  D  R :   L  L  G  K  *  G  *  E  T  L  V  A  L  L  W  W  I  S  *  I  C  W  M  I  :  Q  I  R  D  W  S  M  R  R  S  R  R  L  L  R  E  I  D  Q  Q  L  R  C  L  N  C  P  D  M  G  L  W  R  L  P  G  K  E :   F  D  L  V  *  H  S  *  S  V  N  H  V  C  A  A  M  V  R  G  E  W  K  L  *  R  L  H  T  L  R  L  N  V  K  F  A  G  C  Y :   P  Q  R  I  *  R  Q  T  L  K  T  P  S  L  G  P  D  L  F  S  G  *  I  S  T  C  L  T  I  *  L  Q  E  R  G  Q  G  *  Q  S  *  V  V  L  S  K  F  G  F  F  *  R :   L  L  E  V  L  P  K  G  P  L  S  *  N  L  *  Q  A  T  R  S  T  R  V  M  N  V  K  H  L  F  Q  C  C  D  Q  Q  R  V  D  F  T  P  L  G  K  K  S  P  S  S  P  S  K  S  G  V  V  E  S  D  V  T  S  I  K  N  H  L  Y  R  S  Q  K  T  M  Q  I  H  I  W  L  A  *  I  Y  *  P  I  L  S  S  L  L  S  F  S  R  R  L  V  R  N  S  *  F  Y  E  E  I  N  F  A  *  H  :  K  N  K   </second_frame>
            <third_frame>   K  W  *  C  L  *  Y  F  R  S  P  C  R  K  L  *  W  *  C  N  *  A  W  A  *  N  S  F  R  E  I  S  R  R  I  Q  W  N  W  V  P  R  A  E  S  N  Y  *  A  C  Y  E  W  *  E  N  F  T  K  R  *  K  Q  V  G  P  G  P  K  R  H  *  N  N  C  A  S  C  *  R  R  I  G  Y  E  G  P  N  T  D  C  L  S  E  I  K  E  Q  I  L   : G  F  S  S  S  R  Q  H  D  R  Y  F  K  E  D  C  W  C  *  A  H  T  F  K  G  H  C  K  N  F  T  A  S  R  I  W  S  Y  S  K  D  S  C  S  W  S  F  T  K  *  I  A  E  G  L  G  R  V  A  F  N  L  E  K  Y  N  *  A  C  K  V  C  S  S  C  R  R  *  R  C  *  W  S  S  S  C  H  A  S  P  G  N  G  P  N  T  F  C  C  S  R  L  F  *  R  *   : G  E  *  F  G  G  *  F  S  K  D  I  S  *   : G  Y  K  L  S  S  R  N  G  T  *  S  L  *  K  S  *  V  A  W  Y  K  N  S  P  V  *  *  I  Q  H  *  G  R  N  K  Q  H  S  Q  Q  K  :  G  S  P  *  *  W  R  L  F  S  D  R  T  D  R  G  F  S  L  H  R  C  K  W  W  T  L  C  A  W  S  R  D  F  T  R  D  G  Y  S  Q  C  *  P  C  S  C  *  T   : D  C  *  G  N  K  A  E  R  H  W  W  H  Y  C  G  G  F  H  R  Y  V  G  *  F :   K  *  E  I  G  L  *  G  G  Q  E  G  C  *  E  R  S  I  N  S  *  G  V  *  I  V  Q  T  W  A  Y  G  D  Y  Q  E  K   : S  S  T  *  C  D  I  H  D  Q  *  T  M  Y  V  L  P  W  Y  G  E  S  G  S  F  S  D  C  I  L  *  D  *  T  *  N  L  P  V  A   : I  H  N  G  S  E  G  R  P  *  K  P  Q  V  L  A  Q  I  Y  S  Q  G  R  S  V  H  V  *  L  F  N  F  R  K  E  D  K  A  S  N  L  E  *  F  S  Q  S  L  A  S  S  K   : G  C  *  R  F  Y  Q  R  D  L  *  A  K  T  F  N  R  R  Q  G  V  Q  G  *  *  T  *  N  I  Y  F  S  V  A  T  N  R  G  W  I  S  P  P  S  E  K  S  H  H  L  P  H  Q  K  V  E  *  W  K  V  M  L  P  P  L  R  I  I  C  T  G  L  K  K  Q  C  K  S  T  Y  G  *  H  K  F  I  S  Q  F  F  L  P  S  *  V  F  L  V  G  L  *  E  I  A  S  F  M  R  K  S  I  L  H  S  I :   K  T  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132482" stop="132180"/>
                    <exon start="132088" stop="131771"/>
                    <exon start="131638" stop="131597"/>
                    <exon start="130964" stop="130840"/>
                    <exon start="130709" stop="130562"/>
                    <exon start="129572" stop="129500"/>
                    <exon start="128980" stop="128868"/>
                    <exon start="128776" stop="128657"/>
                    <exon start="128417" stop="128262"/>
                    <exon start="128175" stop="127996"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1575</number_coding_nucleotides>
                  <number_encoded_amino_acids>525</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESGDACDILEVLAENCNGSVTEHGLETHSEKYPEESSGIGYRGQNPTIERAMNGKRISQRDESKWVQVRKGTKIIVQVVKEGLGTKGPTLTAYPKLRSRFWVLVPRGNTIGISKKIAGVERTRLRVIAKTLQPQGYGLTVRTVAAGHSLNELQKDLEGLLSTWKSIIEHAKSAALAADEGVDGAVPVMLHQAMGQTLSVVQDYFSDKVNSLVVDSPRTYHEVTNYLQEMAPNLCERVELHGTRTPLFDEYNIEEEINNILSKRVPLDNGGYLVIEQTEALVSIDVNGGHCVLGQGTSQEMAILNVNLAAARQIAREIRLRDIGGIIVVDFIDMLDDSNKRLVYEEVKKAVERDRSTVKVSELSRHGLMEITRKRVRPSVTFMISEPCMCCHGTGRVEALATAYSKIEREICRLLSTTDLKADPENPKSWPRFILRVDQYMSNYLTSGKRTRLAILSSSLKVWLLLKVARGFTKGTFELKPLTGDKEYKGDERETSISVLRPTEGGFHPPRKKVTIFPIKKWSSGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="135234" PGL_stop="133189"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135214" e_stop="135125"/>
            <exon e_start="134498" e_stop="134293"/>
            <exon e_start="133862" e_stop="133616"/>
            <exon e_start="133513" e_stop="133189"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.905" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.705" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="135214" e_stop="135125" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.905" acc_prob="0.992">
            <gDNA_intron_boundary i_start="135124" i_stop="134499" i_length="626"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="134498" e_stop="134293" e_length="206"/>
          </exon>
          <intron i_serial="2" don_prob="0.977" acc_prob="0.705">
            <gDNA_intron_boundary i_start="134292" i_stop="133863" i_length="430"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="133862" e_stop="133616" e_length="247"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.986">
            <gDNA_intron_boundary i_start="133615" i_stop="133514" i_length="102"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="133513" e_stop="133189" e_length="325"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135214" stop="135125"/>
              <exon start="134498" stop="134293"/>
              <exon start="133862" stop="133616"/>
              <exon start="133513" stop="133189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738632" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135166" stop="135125"/>
              <exon start="134498" stop="134293"/>
              <exon start="133862" stop="133616"/>
              <exon start="133513" stop="133246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134498" stop="134293"/>
              <exon start="133862" stop="133646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472034" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAGAAATTGAAAACCCCCGTAGAAAATAGGAAGGAGTGGCTCCTTATCTTTCAAGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAG : AAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAG : ATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAG : ATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCGATTCTTCCTTGCTTCTTCATCATTTGGCAGAGTCTGATGCTTCTGGTGATGTCATTTGTGACAACAAGATTGTTGAGGGTCTTGACTGTGAAAATTTAGAATCAGGATTCGTAAATCAGTCCACACTTAGTGAGACTTTATGGTCCAAGTATGA</gDNA_template>
            <first_frame> K  R  N  *  K  P  P  *  K  I  G  R  S  G  S  L  S  F  K  N  Q  S  *  P  F  S  L  L  S  E  :  K  Q  F  A  R  L  V  V  K  F  Y  D  G  C  L  M  Q  H  I  M  I  S  Q  A  L  C  L  L  N  W  K  Y  H  L  R  C  L  E  L  E  K  L  I  Q  W  M  V  N  F  W  R  W  L  F  S  C  L  V  L  K  S  L  A  Y  G  R  R  Q  R :   Y  C  I  Q  D  I  *  A  A  T  L  L  *  R  E  I  C  G  L  H  L  L  L  Y  A  K  L  G  M  M  S  P  C  Q  Y  L  L  N  K  E  E  N  F  S  Q  G  T  Y  G  L  N  L  I  Q  G  C  L  W  A  A  C  L  D  P  G  L  *  K  G  L  Y  L  S  I  Y  S  F  Q  I  A  L  E  :  M  G  M  L  L  *  N  A  *  T  A  I  L  P  S  *  S  R  S  L  V  I  L  *  M  R  I  V  F  S  Q  M  R  L  I  Q  L  Q  T  V  A  K  V  F  Q  L  N  L  *  P  L  K  S  H  G  Y  A  I  L  P  C  F  F  I  I  W  Q  S  L  M  L  L  V  M  S  F  V  T  T  R  L  L  R  V  L  T  V  K  I  *  N  Q  D  S  *  I  S  P  H  L  V  R  L  Y  G  P  S  M  </first_frame>
            <second_frame>  R  E  I  E  N  P  R  R  K  *  E  G  V  A  P  Y  L  S  R  T  R  V  S  R  S  L  C  C  P  R :   N  S  S  H  A  W  *  L  S  F  M  M  A  A  *  C  S  T  L  *  F  L  K  H  F  V  C  *  I  G  S  I  I  *  G  A  L  S  W  R  S  *  F  S  G  W  S  I  S  G  D  G  Y  S  L  V  L  Y  *  N  L  *  P  M  G  D  V  K   : D  T  A  F  K  T  F  E  L  Q  L  F  C  E  G  R  Y  V  D  F  I  C  C  F  M  Q  S  *  A  *  C  L  R  V  S  T  F  *  T  K  R  K  T  F  P  K  E  L  M  D  *  I  S  Y  K  D  A  F  G  Q  H  V  W  I  L  A  C  R  K  V  Y  T  Y  P  S  I  R  F  R  S  L  *  R :   W  E  C  Y  C  E  M  L  E  Q  Q  F  F  H  P  K  A  G  L  *  *  F  Y  R  *  G  *  F  F  L  R  *  D  *  Y  N  F  R  L  W  Q  K  Y  F  N  *  T  F  D  H  *  R  A  M  A  M  R  F  F  L  A  S  S  S  F  G  R  V  *  C  F  W  *  C  H  L  *  Q  Q  D  C  *  G  S  *  L  *  K  F  R  I  R  I  R  K  S  V  H  T  *  *  D  F  M  V  Q  V  * </second_frame>
            <third_frame>   E  K  L  K  T  P  V  E  N  R  K  E  W  L  L  I  F  Q  E  P  E  L  A  V  L  F  A  V  R   : E  T  V  R  T  L  G  S  *  V  L  *  W  L  L  D  A  A  H  Y  D  F  S  S  T  L  F  V  E  L  E  V  S  F  E  V  P  *  V  G  E  V  D  S  V  D  G  Q  F  L  E  M  V  I  L  L  S  C  T  E  I  S  S  L  W  E  T  S  K  :  I  L  H  S  R  H  L  S  C  N  S  S  V  K  G  D  M  W  T  S  S  V  A  L  C  K  A  R  H  D  V  S  V  S  V  P  S  K  Q  R  G  K  L  F  P  R  N  L  W  I  K  S  H  T  R  M  P  L  G  S  M  F  G  S  W  L  V  E  R  S  I  P  I  H  L  F  V  S  D  R  S  R   : D  G  N  V  T  V  K  C  L  N  S  N  S  S  I  L  K  Q  V  F  S  D  F  I  D  E  D  S  F  F  S  D  E  I  D  T  T  S  D  C  G  K  S  I  S  T  E  P  L  T  I  E  E  P  W  L  C  D  S  S  L  L  L  H  H  L  A  E  S  D  A  S  G  D  V  I  C  D  N  K  I  V  E  G  L  D  C  E  N  L  E  S  G  F  V  N  Q  S  T  L  S  E  T  L  W  S  K  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134385" stop="134293"/>
                    <exon start="133862" stop="133616"/>
                    <exon start="133513" stop="133191"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGEVDSVDGQFLEMVILLSCTEISSLWETSKILHSRHLSCNSSVKGDMWTSSVALCKARHDVSVSVPSKQRGKLFPRNLWIKSHTRMPLGSMFGSWLVERSIPIHLFVSDRSRDGNVTVKCLNSNSSILKQVFSDFIDEDSFFSDEIDTTSDCGKSISTEPLTIEEPWLCDSSLLLHHLAESDASGDVICDNKIVEGLDCENLESGFVNQSTLSETLWSKY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="135234" e_stop="135125"/>
            <exon e_start="134498" e_stop="134293"/>
            <exon e_start="133862" e_stop="133616"/>
            <exon e_start="133523" e_stop="133328"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.905" acc_prob="0.992" e_score="0.964"/>
          <exon-intron don_prob="0.977" acc_prob="0.705" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="135234" e_stop="135125" e_length="110"/>
          </exon>
          <intron i_serial="1" don_prob="0.905" acc_prob="0.992">
            <gDNA_intron_boundary i_start="135124" i_stop="134499" i_length="626"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="134498" e_stop="134293" e_length="206"/>
          </exon>
          <intron i_serial="2" don_prob="0.977" acc_prob="0.705">
            <gDNA_intron_boundary i_start="134292" i_stop="133863" i_length="430"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="133862" e_stop="133616" e_length="247"/>
          </exon>
          <intron i_serial="3" don_prob="0.978" acc_prob="0.975">
            <gDNA_intron_boundary i_start="133615" i_stop="133524" i_length="92"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="133523" e_stop="133328" e_length="196"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135234" stop="135125"/>
              <exon start="134498" stop="134293"/>
              <exon start="133862" stop="133616"/>
              <exon start="133523" stop="133328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134498" stop="134293"/>
              <exon start="133862" stop="133646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472034" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAGAAAGGAAGGAAAATAAAAGAGAAATTGAAAACCCCCGTAGAAAATAGGAAGGAGTGGCTCCTTATCTTTCAAGAACCAGAGTTAGCCGTTCTCTTTGCTGTCCGAG : AAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAG : ATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAG : TGAAATGCAGATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAGCAGGTCTTTAGTGATTTTATAGATGAGGATAGTTTTTTCTCAGATGAGATTGATACAACTTCAGACTGTGGCAAAAGTATTTCAACTGAACCTTTGACCATTGAAGAGCCATGGCTATGCGATTCTTCCTTGCTTC</gDNA_template>
            <first_frame> Q  E  R  K  E  N  K  R  E  I  E  N  P  R  R  K  *  E  G  V  A  P  Y  L  S  R  T  R  V  S  R  S  L  C  C  P  R :   N  S  S  H  A  W  *  L  S  F  M  M  A  A  *  C  S  T  L  *  F  L  K  H  F  V  C  *  I  G  S  I  I  *  G  A  L  S  W  R  S  *  F  S  G  W  S  I  S  G  D  G  Y  S  L  V  L  Y  *  N  L  *  P  M  G  D  V  K   : D  T  A  F  K  T  F  E  L  Q  L  F  C  E  G  R  Y  V  D  F  I  C  C  F  M  Q  S  *  A  *  C  L  R  V  S  T  F  *  T  K  R  K  T  F  P  K  E  L  M  D  *  I  S  Y  K  D  A  F  G  Q  H  V  W  I  L  A  C  R  K  V  Y  T  Y  P  S  I  R  F  R  S  L  *  S :   E  M  Q  M  G  M  L  L  *  N  A  *  T  A  I  L  P  S  *  S  R  S  L  V  I  L  *  M  R  I  V  F  S  Q  M  R  L  I  Q  L  Q  T  V  A  K  V  F  Q  L  N  L  *  P  L  K  S  H  G  Y  A  I  L  P  C  F </first_frame>
            <second_frame>  K  K  G  R  K  I  K  E  K  L  K  T  P  V  E  N  R  K  E  W  L  L  I  F  Q  E  P  E  L  A  V  L  F  A  V  R   : E  T  V  R  T  L  G  S  *  V  L  *  W  L  L  D  A  A  H  Y  D  F  S  S  T  L  F  V  E  L  E  V  S  F  E  V  P  *  V  G  E  V  D  S  V  D  G  Q  F  L  E  M  V  I  L  L  S  C  T  E  I  S  S  L  W  E  T  S  K  :  I  L  H  S  R  H  L  S  C  N  S  S  V  K  G  D  M  W  T  S  S  V  A  L  C  K  A  R  H  D  V  S  V  S  V  P  S  K  Q  R  G  K  L  F  P  R  N  L  W  I  K  S  H  T  R  M  P  L  G  S  M  F  G  S  W  L  V  E  R  S  I  P  I  H  L  F  V  S  D  R  S  R   : V  K  C  R  W  E  C  Y  C  E  M  L  E  Q  Q  F  F  H  P  K  A  G  L  *  *  F  Y  R  *  G  *  F  F  L  R  *  D  *  Y  N  F  R  L  W  Q  K  Y  F  N  *  T  F  D  H  *  R  A  M  A  M  R  F  F  L  A   </second_frame>
            <third_frame>   R  K  E  G  K  *  K  R  N  *  K  P  P  *  K  I  G  R  S  G  S  L  S  F  K  N  Q  S  *  P  F  S  L  L  S  E  :  K  Q  F  A  R  L  V  V  K  F  Y  D  G  C  L  M  Q  H  I  M  I  S  Q  A  L  C  L  L  N  W  K  Y  H  L  R  C  L  E  L  E  K  L  I  Q  W  M  V  N  F  W  R  W  L  F  S  C  L  V  L  K  S  L  A  Y  G  R  R  Q  R :   Y  C  I  Q  D  I  *  A  A  T  L  L  *  R  E  I  C  G  L  H  L  L  L  Y  A  K  L  G  M  M  S  P  C  Q  Y  L  L  N  K  E  E  N  F  S  Q  G  T  Y  G  L  N  L  I  Q  G  C  L  W  A  A  C  L  D  P  G  L  *  K  G  L  Y  L  S  I  Y  S  F  Q  I  A  L  E  :  *  N  A  D  G  N  V  T  V  K  C  L  N  S  N  S  S  I  L  K  Q  V  F  S  D  F  I  D  E  D  S  F  F  S  D  E  I  D  T  T  S  D  C  G  K  S  I  S  T  E  P  L  T  I  E  E  P  W  L  C  D  S  S  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="22" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134385" stop="134293"/>
                    <exon start="133862" stop="133616"/>
                    <exon start="133523" stop="133453"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGEVDSVDGQFLEMVILLSCTEISSLWETSKILHSRHLSCNSSVKGDMWTSSVALCKARHDVSVSVPSKQRGKLFPRNLWIKSHTRMPLGSMFGSWLVERSIPIHLFVSDRSRVKCRWECYCEMLEQQFFHPKAGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="134501" e_stop="134293"/>
            <exon e_start="133865" e_stop="133616"/>
            <exon e_start="133513" e_stop="133464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.000" e_score="0.947"/>
          <exon-intron don_prob="0.978" acc_prob="0.986" e_score="0.940"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="134501" e_stop="134293" e_length="209"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.000">
            <gDNA_intron_boundary i_start="134292" i_stop="133866" i_length="427"/>
          </intron>
          <exon e_serial="2" e_score="0.940">
            <gDNA_exon_boundary e_start="133865" e_stop="133616" e_length="250"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.986">
            <gDNA_intron_boundary i_start="133615" i_stop="133514" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="0.980">
            <gDNA_exon_boundary e_start="133513" e_stop="133464" e_length="50"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134501" stop="134293"/>
              <exon start="133865" stop="133616"/>
              <exon start="133513" stop="133464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487904" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAAACAGTTCGCACGCTTGGTAGTTAAGTTTTATGATGGCTGCTTGATGCAGCACATTATGATTTCTCAAGCACTTTGTTTGTTGAATTGGAAGTATCATTTGAGGTGCCTTGAGTTGGAGAAGTTGATTCAGTGGATGGTCAATTTCTGGAGATGGTTATTCTCTTGTCTTGTACTGAAATCTCTAGCCTATGGGAGACGTCAAAG : CAGATACTGCATTCAAGACATTTGAGCTGCAACTCTTCTGTGAAGGGAGATATGTGGACTTCATCTGTTGCTTTATGCAAAGCTAGGCATGATGTCTCCGTGTCAGTACCTTCTAAACAAAGAGGAAAACTTTTCCCAAGGAACTTATGGATTAAATCTCATACAAGGATGCCTTTGGGCAGCATGTTTGGATCCTGGCTTGTAGAAAGGTCTATACCTATCCATCTATTCGTTTCAGATCGCTCTAGAG : ATGGGAATGTTACTGTGAAATGCTTGAACAGCAATTCTTCCATCCTAAAG</gDNA_template>
            <first_frame> Q  K  Q  F  A  R  L  V  V  K  F  Y  D  G  C  L  M  Q  H  I  M  I  S  Q  A  L  C  L  L  N  W  K  Y  H  L  R  C  L  E  L  E  K  L  I  Q  W  M  V  N  F  W  R  W  L  F  S  C  L  V  L  K  S  L  A  Y  G  R  R  Q  S :   R  Y  C  I  Q  D  I  *  A  A  T  L  L  *  R  E  I  C  G  L  H  L  L  L  Y  A  K  L  G  M  M  S  P  C  Q  Y  L  L  N  K  E  E  N  F  S  Q  G  T  Y  G  L  N  L  I  Q  G  C  L  W  A  A  C  L  D  P  G  L  *  K  G  L  Y  L  S  I  Y  S  F  Q  I  A  L  E  :  M  G  M  L  L  *  N  A  *  T  A  I  L  P  S  *   </first_frame>
            <second_frame>  R  N  S  S  H  A  W  *  L  S  F  M  M  A  A  *  C  S  T  L  *  F  L  K  H  F  V  C  *  I  G  S  I  I  *  G  A  L  S  W  R  S  *  F  S  G  W  S  I  S  G  D  G  Y  S  L  V  L  Y  *  N  L  *  P  M  G  D  V  K   : A  D  T  A  F  K  T  F  E  L  Q  L  F  C  E  G  R  Y  V  D  F  I  C  C  F  M  Q  S  *  A  *  C  L  R  V  S  T  F  *  T  K  R  K  T  F  P  K  E  L  M  D  *  I  S  Y  K  D  A  F  G  Q  H  V  W  I  L  A  C  R  K  V  Y  T  Y  P  S  I  R  F  R  S  L  *  R :   W  E  C  Y  C  E  M  L  E  Q  Q  F  F  H  P  K  </second_frame>
            <third_frame>   E  T  V  R  T  L  G  S  *  V  L  *  W  L  L  D  A  A  H  Y  D  F  S  S  T  L  F  V  E  L  E  V  S  F  E  V  P  *  V  G  E  V  D  S  V  D  G  Q  F  L  E  M  V  I  L  L  S  C  T  E  I  S  S  L  W  E  T  S  K  :  Q  I  L  H  S  R  H  L  S  C  N  S  S  V  K  G  D  M  W  T  S  S  V  A  L  C  K  A  R  H  D  V  S  V  S  V  P  S  K  Q  R  G  K  L  F  P  R  N  L  W  I  K  S  H  T  R  M  P  L  G  S  M  F  G  S  W  L  V  E  R  S  I  P  I  H  L  F  V  S  D  R  S  R   : D  G  N  V  T  V  K  C  L  N  S  N  S  S  I  L  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="22" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134385" stop="134293"/>
                    <exon start="133865" stop="133616"/>
                    <exon start="133513" stop="133464"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGEVDSVDGQFLEMVILLSCTEISSLWETSKQILHSRHLSCNSSVKGDMWTSSVALCKARHDVSVSVPSKQRGKLFPRNLWIKSHTRMPLGSMFGSWLVERSIPIHLFVSDRSRDGNVTVKCLNSNSSILK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="137170" PGL_stop="136240"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="137170" e_stop="136240"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="137170" e_stop="136240" e_length="931"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137170" stop="136374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137170" stop="136420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461068" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136783" stop="136325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347211" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136656" stop="136243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349516" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136635" stop="136240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349103" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAGAATCGGAAGTTGCCAAATTTGATGACCCAGCTTCAGCTGCTAAAGCAGCTGCTGAATCTGCCAAGCAAGCAATTGCAGCTGCTGAAGCAGCTGCATATCTAGCCAGTAAAGACGCAAAAGCATCTTCTGCTGGTTGTCACTACTCTCCGAAGAATGCAACTGCTGACAATATCCCTTTCATTTCTGGTGCTCAGGCTCCCAAGTTCTCGCAAATTGAAGTGGCACCACCTTCTCAGTCCATAGTTGATCTTTATGATATGCACTGGAGTAGTAAGAACATCAGGAATTCCGAAAATTCTCATAGTTCTGCTGGTGAAGAGATGCCATTAGATATGAAAAGATCACAGAAGTTCGACAGGAGACATAGCTATAATGTTCCATCCTCAAATCGTAATGTTCAGTATGATGATTCAGACTGTGATGAGGAAATCGAGATGGAAGATCCGCCGAGTGGGACATATAAACCCAGCCCACCAACTGATATTGATGGTGGGAAGTTCTACAGAAGGCACAGCTACAATGTTCCATCAGTACATTCAGGTATCAAGTTTGATGAATCAGATGGTGAAGAAGAGATGGGAACTCACGAATTCAGTAGAGGAACCAATCGAGCCCCTAACCGTCCTGCACCTCATGTGCCTCGGGTTCATCCCAATTTACCTGACTACGACAAACTTACTGCTCGCTTCGAGTCTCTCAAGTCCCAGAAATCTCGTCGCACCTAGATTATCCAAGGTTCATGAAGTCAGATACATTTTGTGCCAGTCCAATATTATTGTATACAGTACAGAAACCAAATGATATGTTAAAAATGGTTCATTTATAGTAGGTCATTTCGTGGAGTTCACTTATTGCCTTTGTGTTGACTTTACAAATTTGGGTGTAATAAATCTTGGATATTCCTTTTACAAGGTTGTTCAGTGGATC</gDNA_template>
            <first_frame> G  E  S  E  V  A  K  F  D  D  P  A  S  A  A  K  A  A  A  E  S  A  K  Q  A  I  A  A  A  E  A  A  A  Y  L  A  S  K  D  A  K  A  S  S  A  G  C  H  Y  S  P  K  N  A  T  A  D  N  I  P  F  I  S  G  A  Q  A  P  K  F  S  Q  I  E  V  A  P  P  S  Q  S  I  V  D  L  Y  D  M  H  W  S  S  K  N  I  R  N  S  E  N  S  H  S  S  A  G  E  E  M  P  L  D  M  K  R  S  Q  K  F  D  R  R  H  S  Y  N  V  P  S  S  N  R  N  V  Q  Y  D  D  S  D  C  D  E  E  I  E  M  E  D  P  P  S  G  T  Y  K  P  S  P  P  T  D  I  D  G  G  K  F  Y  R  R  H  S  Y  N  V  P  S  V  H  S  G  I  K  F  D  E  S  D  G  E  E  E  M  G  T  H  E  F  S  R  G  T  N  R  A  P  N  R  P  A  P  H  V  P  R  V  H  P  N  L  P  D  Y  D  K  L  T  A  R  F  E  S  L  K  S  Q  K  S  R  R  T  *  I  I  Q  G  S  *  S  Q  I  H  F  V  P  V  Q  Y  Y  C  I  Q  Y  R  N  Q  M  I  C  *  K  W  F  I  Y  S  R  S  F  R  G  V  H  L  L  P  L  C  *  L  Y  K  F  G  C  N  K  S  W  I  F  L  L  Q  G  C  S  V  D  </first_frame>
            <second_frame>  E  N  R  K  L  P  N  L  M  T  Q  L  Q  L  L  K  Q  L  L  N  L  P  S  K  Q  L  Q  L  L  K  Q  L  H  I  *  P  V  K  T  Q  K  H  L  L  L  V  V  T  T  L  R  R  M  Q  L  L  T  I  S  L  S  F  L  V  L  R  L  P  S  S  R  K  L  K  W  H  H  L  L  S  P  *  L  I  F  M  I  C  T  G  V  V  R  T  S  G  I  P  K  I  L  I  V  L  L  V  K  R  C  H  *  I  *  K  D  H  R  S  S  T  G  D  I  A  I  M  F  H  P  Q  I  V  M  F  S  M  M  I  Q  T  V  M  R  K  S  R  W  K  I  R  R  V  G  H  I  N  P  A  H  Q  L  I  L  M  V  G  S  S  T  E  G  T  A  T  M  F  H  Q  Y  I  Q  V  S  S  L  M  N  Q  M  V  K  K  R  W  E  L  T  N  S  V  E  E  P  I  E  P  L  T  V  L  H  L  M  C  L  G  F  I  P  I  Y  L  T  T  T  N  L  L  L  A  S  S  L  S  S  P  R  N  L  V  A  P  R  L  S  K  V  H  E  V  R  Y  I  L  C  Q  S  N  I  I  V  Y  S  T  E  T  K  *  Y  V  K  N  G  S  F  I  V  G  H  F  V  E  F  T  Y  C  L  C  V  D  F  T  N  L  G  V  I  N  L  G  Y  S  F  Y  K  V  V  Q  W  I </second_frame>
            <third_frame>   R  I  G  S  C  Q  I  *  *  P  S  F  S  C  *  S  S  C  *  I  C  Q  A  S  N  C  S  C  *  S  S  C  I  S  S  Q  *  R  R  K  S  I  F  C  W  L  S  L  L  S  E  E  C  N  C  *  Q  Y  P  F  H  F  W  C  S  G  S  Q  V  L  A  N  *  S  G  T  T  F  S  V  H  S  *  S  L  *  Y  A  L  E  *  *  E  H  Q  E  F  R  K  F  S  *  F  C  W  *  R  D  A  I  R  Y  E  K  I  T  E  V  R  Q  E  T  *  L  *  C  S  I  L  K  S  *  C  S  V  *  *  F  R  L  *  *  G  N  R  D  G  R  S  A  E  W  D  I  *  T  Q  P  T  N  *  Y  *  W  W  E  V  L  Q  K  A  Q  L  Q  C  S  I  S  T  F  R  Y  Q  V  *  *  I  R  W  *  R  R  D  G  N  S  R  I  Q  *  R  N  Q  S  S  P  *  P  S  C  T  S  C  A  S  G  S  S  Q  F  T  *  L  R  Q  T  Y  C  S  L  R  V  S  Q  V  P  E  I  S  S  H  L  D  Y  P  R  F  M  K  S  D  T  F  C  A  S  P  I  L  L  Y  T  V  Q  K  P  N  D  M  L  K  M  V  H  L  *  *  V  I  S  W  S  S  L  I  A  F  V  L  T  L  Q  I  W  V  *  *  I  L  D  I  P  F  T  R  L  F  S  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137170" stop="136442"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>726</number_coding_nucleotides>
                  <number_encoded_amino_acids>242</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GESEVAKFDDPASAAKAAAESAKQAIAAAEAAAYLASKDAKASSAGCHYSPKNATADNIPFISGAQAPKFSQIEVAPPSQSIVDLYDMHWSSKNIRNSENSHSSAGEEMPLDMKRSQKFDRRHSYNVPSSNRNVQYDDSDCDEEIEMEDPPSGTYKPSPPTDIDGGKFYRRHSYNVPSVHSGIKFDESDGEEEMGTHEFSRGTNRAPNRPAPHVPRVHPNLPDYDKLTARFESLKSQKSRRT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="136270" PGL_stop="136821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136270" e_stop="136821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="136270" e_stop="136821" e_length="552"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136270" stop="136821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436564" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCAAGATTTATTACACCCAAATTTGTAAAGTCAACACAAAGGCAATAAGTGAACTCCACGAAATGACCTACTATAAATGAACCATTTTTAACATATCATTTGGTTTCTGTACTGTATACAATAATATTGGACTGGCACAAAATGTATCTGACTTCATGAACCTTGGATAATCTAGGTGCGACGAGATTTCTGGGACTTGAGAGACTCGAAGCGAGCAGTAAGTTTGTCGTAGTCAGGTAAATTGGGATGAACCCGAGGCACATGAGGTGCAGGACGGTTAGGGGCTCGATTGGTTCCTCTACTGAATTCGTGAGTTCCCATCTCTTCTTCACCATCTGATTCATCAAACTTGATACCTGAATGTACTGATGGAACATTGTAGCTGTGCCTTCTGTAGAACTTCCCACCATCAATATCAGTTGGTGGGCTGGGTTTATATGTCCCACTCGGCGGATCTTCCATCTCGATTTCCTCATCACAGTCTGAATCATCATACTGAACATTACGATTTGAGGATGGAACATTATAGCTATGTCTCCTGTCGAACTTCT</gDNA_template>
            <first_frame> S  K  I  Y  Y  T  Q  I  C  K  V  N  T  K  A  I  S  E  L  H  E  M  T  Y  Y  K  *  T  I  F  N  I  S  F  G  F  C  T  V  Y  N  N  I  G  L  A  Q  N  V  S  D  F  M  N  L  G  *  S  R  C  D  E  I  S  G  T  *  E  T  R  S  E  Q  *  V  C  R  S  Q  V  N  W  D  E  P  E  A  H  E  V  Q  D  G  *  G  L  D  W  F  L  Y  *  I  R  E  F  P  S  L  L  H  H  L  I  H  Q  T  *  Y  L  N  V  L  M  E  H  C  S  C  A  F  C  R  T  S  H  H  Q  Y  Q  L  V  G  W  V  Y  M  S  H  S  A  D  L  P  S  R  F  P  H  H  S  L  N  H  H  T  E  H  Y  D  L  R  M  E  H  Y  S  Y  V  S  C  R  T  S </first_frame>
            <second_frame>  P  R  F  I  T  P  K  F  V  K  S  T  Q  R  Q  *  V  N  S  T  K  *  P  T  I  N  E  P  F  L  T  Y  H  L  V  S  V  L  Y  T  I  I  L  D  W  H  K  M  Y  L  T  S  *  T  L  D  N  L  G  A  T  R  F  L  G  L  E  R  L  E  A  S  S  K  F  V  V  V  R  *  I  G  M  N  P  R  H  M  R  C  R  T  V  R  G  S  I  G  S  S  T  E  F  V  S  S  H  L  F  F  T  I  *  F  I  K  L  D  T  *  M  Y  *  W  N  I  V  A  V  P  S  V  E  L  P  T  I  N  I  S  W  W  A  G  F  I  C  P  T  R  R  I  F  H  L  D  F  L  I  T  V  *  I  I  I  L  N  I  T  I  *  G  W  N  I  I  A  M  S  P  V  E  L   </second_frame>
            <third_frame>   Q  D  L  L  H  P  N  L  *  S  Q  H  K  G  N  K  *  T  P  R  N  D  L  L  *  M  N  H  F  *  H  I  I  W  F  L  Y  C  I  Q  *  Y  W  T  G  T  K  C  I  *  L  H  E  P  W  I  I  *  V  R  R  D  F  W  D  L  R  D  S  K  R  A  V  S  L  S  *  S  G  K  L  G  *  T  R  G  T  *  G  A  G  R  L  G  A  R  L  V  P  L  L  N  S  *  V  P  I  S  S  S  P  S  D  S  S  N  L  I  P  E  C  T  D  G  T  L  *  L  C  L  L  *  N  F  P  P  S  I  S  V  G  G  L  G  L  Y  V  P  L  G  G  S  S  I  S  I  S  S  S  Q  S  E  S  S  Y  *  T  L  R  F  E  D  G  T  L  *  L  C  L  L  S  N  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136624" stop="136821"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLNVLMEHCSCAFCRTSHHQYQLVGWVYMSHSADLPSRFPHHSLNHHTEHYDLRMEHYSYVSCRTS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="139550" PGL_stop="137334"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="139550" e_stop="139359"/>
            <exon e_start="139280" e_stop="139148"/>
            <exon e_start="138086" e_stop="137983"/>
            <exon e_start="137894" e_stop="137723"/>
            <exon e_start="137611" e_stop="137471"/>
            <exon e_start="137380" e_stop="137334"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.646" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.535" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="139550" e_stop="139359" e_length="192"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="139358" i_stop="139281" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="139280" e_stop="139148" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.989">
            <gDNA_intron_boundary i_start="139147" i_stop="138087" i_length="1061"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="138086" e_stop="137983" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.646" acc_prob="0.980">
            <gDNA_intron_boundary i_start="137982" i_stop="137895" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="137894" e_stop="137723" e_length="172"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.535">
            <gDNA_intron_boundary i_start="137722" i_stop="137612" i_length="111"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="137611" e_stop="137471" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.979">
            <gDNA_intron_boundary i_start="137470" i_stop="137381" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="137380" e_stop="137334" e_length="47"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139550" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="137983"/>
              <exon start="137894" stop="137723"/>
              <exon start="137611" stop="137471"/>
              <exon start="137380" stop="137351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139546" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="137983"/>
              <exon start="137894" stop="137723"/>
              <exon start="137611" stop="137594"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139531" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="137983"/>
              <exon start="137894" stop="137723"/>
              <exon start="137611" stop="137471"/>
              <exon start="137380" stop="137334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619517" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139529" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="138039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139520" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="137983"/>
              <exon start="137894" stop="137723"/>
              <exon start="137611" stop="137553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313784" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139481" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="137983"/>
              <exon start="137894" stop="137731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139474" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="137983"/>
              <exon start="137894" stop="137778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482346" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139397" stop="139359"/>
              <exon start="139280" stop="139148"/>
              <exon start="138086" stop="137983"/>
              <exon start="137894" stop="137723"/>
              <exon start="137611" stop="137597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138047" stop="137983"/>
              <exon start="137894" stop="137742"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590705" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAACGACCGTTACACATACAACTCTGTTCTCTTCTTCACTACCATTCTCACACACACTCTTCTCATCGCTTCACTCTCTCTCTCTCTTTTAACAAGAAAATGACAGTAGCAAACGCTGCCACCAAGCACTGCAAGAAGGCCATGAAGATGGGTCTTTCTCTCTTCTGCAGAACCTTCAATTCTTCTAAATG : CAAGACAATGGCAAAAATGACGGTGGCGAGAATAAAATTGCTGAGAAACAAGAGGGAGGTGGTTGTGCGGCAAATGAGGAGAGACATTGCTATGCTTCTTGAATCCCATCAGGATGCCACTGCTCGTATTAGG : GTCGAACATGTAATAAGAGAACAAAATATATTACAAGCAAATGAGATCCTCGAGCTCTTCTGTGAACTTATTGTGGCTAGGTTAACAATTATTGCAAAGCAAAA : GCAATGTCCAGCTGATTTGAAAGAGGGGATATCAAGTTTGATTTTCGCTGCCCCAAGGTGCTCAGATATTCCAGAATTGATGGGAATCAAAGATGTTTTTGAGAAGAAATATGGAAAAGATTTTGTTTCAGCAGCGACTGACCTGCGACCCAATGCTGGTGTAAACCGGACG : CTCATTGAAAAGCTCTCTGTGAAAACTCCAAGTGGTGAAGTCAAACTAAAAATCATGAAAGAAATAGCCAAAGAATACCAGGTTGAATGGGACACCGCAGATTCAGAGATGGAGCTTCTCAAGCCACCAGAAGAGCGTATA : GAAGGACCAAATGGCTTTGTAAGTGCCACTAGCTTACCCCTGAAGCC</gDNA_template>
            <first_frame> E  T  T  V  T  H  T  T  L  F  S  S  S  L  P  F  S  H  T  L  F  S  S  L  H  S  L  S  L  F  *  Q  E  N  D  S  S  K  R  C  H  Q  A  L  Q  E  G  H  E  D  G  S  F  S  L  L  Q  N  L  Q  F  F  *  M  :  Q  D  N  G  K  N  D  G  G  E  N  K  I  A  E  K  Q  E  G  G  G  C  A  A  N  E  E  R  H  C  Y  A  S  *  I  P  S  G  C  H  C  S  Y  *   : G  R  T  C  N  K  R  T  K  Y  I  T  S  K  *  D  P  R  A  L  L  *  T  Y  C  G  *  V  N  N  Y  C  K  A  K  :  A  M  S  S  *  F  E  R  G  D  I  K  F  D  F  R  C  P  K  V  L  R  Y  S  R  I  D  G  N  Q  R  C  F  *  E  E  I  W  K  R  F  C  F  S  S  D  *  P  A  T  Q  C  W  C  K  P  D   : A  H  *  K  A  L  C  E  N  S  K  W  *  S  Q  T  K  N  H  E  R  N  S  Q  R  I  P  G  *  M  G  H  R  R  F  R  D  G  A  S  Q  A  T  R  R  A  Y   : R  R  T  K  W  L  C  K  C  H  *  L  T  P  E  A </first_frame>
            <second_frame>  K  R  P  L  H  I  Q  L  C  S  L  L  H  Y  H  S  H  T  H  S  S  H  R  F  T  L  S  L  S  F  N  K  K  M  T  V  A  N  A  A  T  K  H  C  K  K  A  M  K  M  G  L  S  L  F  C  R  T  F  N  S  S  K  C :   K  T  M  A  K  M  T  V  A  R  I  K  L  L  R  N  K  R  E  V  V  V  R  Q  M  R  R  D  I  A  M  L  L  E  S  H  Q  D  A  T  A  R  I  R  :  V  E  H  V  I  R  E  Q  N  I  L  Q  A  N  E  I  L  E  L  F  C  E  L  I  V  A  R  L  T  I  I  A  K  Q  K :   Q  C  P  A  D  L  K  E  G  I  S  S  L  I  F  A  A  P  R  C  S  D  I  P  E  L  M  G  I  K  D  V  F  E  K  K  Y  G  K  D  F  V  S  A  A  T  D  L  R  P  N  A  G  V  N  R  T  :  L  I  E  K  L  S  V  K  T  P  S  G  E  V  K  L  K  I  M  K  E  I  A  K  E  Y  Q  V  E  W  D  T  A  D  S  E  M  E  L  L  K  P  P  E  E  R  I  :  E  G  P  N  G  F  V  S  A  T  S  L  P  L  K   </second_frame>
            <third_frame>   N  D  R  Y  T  Y  N  S  V  L  F  F  T  T  I  L  T  H  T  L  L  I  A  S  L  S  L  S  L  L  T  R  K  *  Q  *  Q  T  L  P  P  S  T  A  R  R  P  *  R  W  V  F  L  S  S  A  E  P  S  I  L  L  N   : A  R  Q  W  Q  K  *  R  W  R  E  *  N  C  *  E  T  R  G  R  W  L  C  G  K  *  G  E  T  L  L  C  F  L  N  P  I  R  M  P  L  L  V  L  G :   S  N  M  *  *  E  N  K  I  Y  Y  K  Q  M  R  S  S  S  S  S  V  N  L  L  W  L  G  *  Q  L  L  Q  S  K   : S  N  V  Q  L  I  *  K  R  G  Y  Q  V  *  F  S  L  P  Q  G  A  Q  I  F  Q  N  *  W  E  S  K  M  F  L  R  R  N  M  E  K  I  L  F  Q  Q  R  L  T  C  D  P  M  L  V  *  T  G  R :   S  L  K  S  S  L  *  K  L  Q  V  V  K  S  N  *  K  S  *  K  K  *  P  K  N  T  R  L  N  G  T  P  Q  I  Q  R  W  S  F  S  S  H  Q  K  S  V  * :   K  D  Q  M  A  L  *  V  P  L  A  Y  P  *  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139549" stop="139359"/>
                    <exon start="139280" stop="139148"/>
                    <exon start="138086" stop="137983"/>
                    <exon start="137894" stop="137723"/>
                    <exon start="137611" stop="137471"/>
                    <exon start="137380" stop="137336"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRPLHIQLCSLLHYHSHTHSSHRFTLSLSFNKKMTVANAATKHCKKAMKMGLSLFCRTFNSSKCKTMAKMTVARIKLLRNKREVVVRQMRRDIAMLLESHQDATARIRVEHVIREQNILQANEILELFCELIVARLTIIAKQKQCPADLKEGISSLIFAAPRCSDIPELMGIKDVFEKKYGKDFVSAATDLRPNAGVNRTLIEKLSVKTPSGEVKLKIMKEIAKEYQVEWDTADSEMELLKPPEERIEGPNGFVSATSLPLK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="-" PGL_start="143348" PGL_stop="141073"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="143348" e_stop="141882"/>
            <exon e_start="141091" e_stop="141073"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.996"/>
          <exon-only e_score="0.895"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="143348" e_stop="141882" e_length="1467"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="141881" i_stop="141092" i_length="790"/>
          </intron>
          <exon e_serial="2" e_score="0.895">
            <gDNA_exon_boundary e_start="141091" e_stop="141073" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143348" stop="141882"/>
              <exon start="141091" stop="141073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745278" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143321" stop="142490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143072" stop="142321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322073" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATGAACATAACCTGTTTTGTAAAAGGAAAAAAAAAATGAACCTTTCAACAATTCGAACAATGGCTGCTCTTTCCCCAAGGTCTCATTCTCATAACTCTTACCGTACCCGTTGTGTTAGTTTTCCTGCTAGATCACACCCCAGCACAATCAAGATTGAGCAAGTTTTGAACAAAATCAAAACTTGGGAATCATCTTCTCCTTTATCTCCAAAAGCAGAAGAAAAAACCCAAAATGCCCTGTCAAGCGGCCTTGTAGAATTGTACGAGTGTATAGAGGAACTCCTTGCGTTGCCAATGACTCAGAGGGCGCTTCTCCAGCATCAAGATGACAATTTTGTGAAGGAATTGCTGGAAAGATCAGTGAGATTCATAGATATCTGTAGCAATACAAGGGATACCGTTATGTGTTTGAAAGAAAGCGTGAGAGAACTACAATCCGCGCTTCGAAGAAGCAAAGCTGGAGATGATTTATTGACTATTGAGGGTAGTGTTAGTGCTTATATTTCTTCAAGAAAAAACGCTCAAAAGGAAATTGAAAAATCCCTTACTATACTGAAACAGATACATAACACCCCATCAGCCACAATGAAAGACTCTCAGCTCTCTGCTATAATAAGAGTTCTTGAAGATGCCAGTTTCACAACTATTTCTACTTTCCAGTCATTGCTGATGTTTCTTTATGTGCCAGCCTCGAAACCAAAGTCCAATAAATGGTCATTGGTTTCGAAGCTAGTACATAAAGGGGTTGTAGGCAGTGAAGGGCAAAGGGAAAAGCTAACTGAGTTGGAGAAAGTTGACACTGCACTCAACAGCTTGCTGGATCATGTTTCTGGACATGAAGAGGAAGTGGAAAGTTTTGAATTTGCACAAAAGAATCTGGAGAATTTGGAGAGTAGCATTGAGGATCTTGAAAATGGATTGGAAATGTTGTTCAAGCTTTTGATCCGGACAAGGGTGTCTCTACTCAACATACTTTCTCTCAGTAGATAAATTGAGGTATCATGCATAACAGCTCAAGTATTTTTTTGCATGATTGAAGCTGTGATGTATAGATATTGAATTTCTAGTCATTGAGTACTGTAGATGAACATATTGTGTATAGTATTAGCAGCTAAGGGTGAAGAGGATTAAGAAACATGGACAAAGTTTTCCAATTTCCTAATCTTTTTCTCTGTTTGTCTTTTGTGTTATTCCAGTTTTACAGATTAGTGCCAAAATTTTGCAGAGGTGCTAATTCTGGCCAAGATTAGTTATTATTTGGACTTGAGGCCCAAAGAAGTCCAAGAGTGTGTGCAAGTAACATGTAGCTGTCAATGGGCTGATATGATATGAGTAGGCCCATTCAGTATTTCAGTCCATTAAGGGATTTTAGCCCTTTCTTGTGTATGTTCATTCTGTACTATATAATCCATTAATTAATGGATCTAATTGCTCATTGTGTATGAAATTTGTGAATTTTTTTTTTGG : AAAAAAAAAAGAAAAAGAA</gDNA_template>
            <first_frame> H  E  H  N  L  F  C  K  R  K  K  K  M  N  L  S  T  I  R  T  M  A  A  L  S  P  R  S  H  S  H  N  S  Y  R  T  R  C  V  S  F  P  A  R  S  H  P  S  T  I  K  I  E  Q  V  L  N  K  I  K  T  W  E  S  S  S  P  L  S  P  K  A  E  E  K  T  Q  N  A  L  S  S  G  L  V  E  L  Y  E  C  I  E  E  L  L  A  L  P  M  T  Q  R  A  L  L  Q  H  Q  D  D  N  F  V  K  E  L  L  E  R  S  V  R  F  I  D  I  C  S  N  T  R  D  T  V  M  C  L  K  E  S  V  R  E  L  Q  S  A  L  R  R  S  K  A  G  D  D  L  L  T  I  E  G  S  V  S  A  Y  I  S  S  R  K  N  A  Q  K  E  I  E  K  S  L  T  I  L  K  Q  I  H  N  T  P  S  A  T  M  K  D  S  Q  L  S  A  I  I  R  V  L  E  D  A  S  F  T  T  I  S  T  F  Q  S  L  L  M  F  L  Y  V  P  A  S  K  P  K  S  N  K  W  S  L  V  S  K  L  V  H  K  G  V  V  G  S  E  G  Q  R  E  K  L  T  E  L  E  K  V  D  T  A  L  N  S  L  L  D  H  V  S  G  H  E  E  E  V  E  S  F  E  F  A  Q  K  N  L  E  N  L  E  S  S  I  E  D  L  E  N  G  L  E  M  L  F  K  L  L  I  R  T  R  V  S  L  L  N  I  L  S  L  S  R  *  I  E  V  S  C  I  T  A  Q  V  F  F  C  M  I  E  A  V  M  Y  R  Y  *  I  S  S  H  *  V  L  *  M  N  I  L  C  I  V  L  A  A  K  G  E  E  D  *  E  T  W  T  K  F  S  N  F  L  I  F  F  S  V  C  L  L  C  Y  S  S  F  T  D  *  C  Q  N  F  A  E  V  L  I  L  A  K  I  S  Y  Y  L  D  L  R  P  K  E  V  Q  E  C  V  Q  V  T  C  S  C  Q  W  A  D  M  I  *  V  G  P  F  S  I  S  V  H  *  G  I  L  A  L  S  C  V  C  S  F  C  T  I  *  S  I  N  *  W  I  *  L  L  I  V  Y  E  I  C  E  F  F  F  W  :  K  K  K  R  K  R  </first_frame>
            <second_frame>  M  N  I  T  C  F  V  K  G  K  K  K  *  T  F  Q  Q  F  E  Q  W  L  L  F  P  Q  G  L  I  L  I  T  L  T  V  P  V  V  L  V  F  L  L  D  H  T  P  A  Q  S  R  L  S  K  F  *  T  K  S  K  L  G  N  H  L  L  L  Y  L  Q  K  Q  K  K  K  P  K  M  P  C  Q  A  A  L  *  N  C  T  S  V  *  R  N  S  L  R  C  Q  *  L  R  G  R  F  S  S  I  K  M  T  I  L  *  R  N  C  W  K  D  Q  *  D  S  *  I  S  V  A  I  Q  G  I  P  L  C  V  *  K  K  A  *  E  N  Y  N  P  R  F  E  E  A  K  L  E  M  I  Y  *  L  L  R  V  V  L  V  L  I  F  L  Q  E  K  T  L  K  R  K  L  K  N  P  L  L  Y  *  N  R  Y  I  T  P  H  Q  P  Q  *  K  T  L  S  S  L  L  *  *  E  F  L  K  M  P  V  S  Q  L  F  L  L  S  S  H  C  *  C  F  F  M  C  Q  P  R  N  Q  S  P  I  N  G  H  W  F  R  S  *  Y  I  K  G  L  *  A  V  K  G  K  G  K  S  *  L  S  W  R  K  L  T  L  H  S  T  A  C  W  I  M  F  L  D  M  K  R  K  W  K  V  L  N  L  H  K  R  I  W  R  I  W  R  V  A  L  R  I  L  K  M  D  W  K  C  C  S  S  F  *  S  G  Q  G  C  L  Y  S  T  Y  F  L  S  V  D  K  L  R  Y  H  A  *  Q  L  K  Y  F  F  A  *  L  K  L  *  C  I  D  I  E  F  L  V  I  E  Y  C  R  *  T  Y  C  V  *  Y  *  Q  L  R  V  K  R  I  K  K  H  G  Q  S  F  P  I  S  *  S  F  S  L  F  V  F  C  V  I  P  V  L  Q  I  S  A  K  I  L  Q  R  C  *  F  W  P  R  L  V  I  I  W  T  *  G  P  K  K  S  K  S  V  C  K  *  H  V  A  V  N  G  L  I  *  Y  E  *  A  H  S  V  F  Q  S  I  K  G  F  *  P  F  L  V  Y  V  H  S  V  L  Y  N  P  L  I  N  G  S  N  C  S  L  C  M  K  F  V  N  F  F  F  G :   K  K  K  E  K  E </second_frame>
            <third_frame>   *  T  *  P  V  L  *  K  E  K  K  N  E  P  F  N  N  S  N  N  G  C  S  F  P  K  V  S  F  S  *  L  L  P  Y  P  L  C  *  F  S  C  *  I  T  P  Q  H  N  Q  D  *  A  S  F  E  Q  N  Q  N  L  G  I  I  F  S  F  I  S  K  S  R  R  K  N  P  K  C  P  V  K  R  P  C  R  I  V  R  V  Y  R  G  T  P  C  V  A  N  D  S  E  G  A  S  P  A  S  R  *  Q  F  C  E  G  I  A  G  K  I  S  E  I  H  R  Y  L  *  Q  Y  K  G  Y  R  Y  V  F  E  R  K  R  E  R  T  T  I  R  A  S  K  K  Q  S  W  R  *  F  I  D  Y  *  G  *  C  *  C  L  Y  F  F  K  K  K  R  S  K  G  N  *  K  I  P  Y  Y  T  E  T  D  T  *  H  P  I  S  H  N  E  R  L  S  A  L  C  Y  N  K  S  S  *  R  C  Q  F  H  N  Y  F  Y  F  P  V  I  A  D  V  S  L  C  A  S  L  E  T  K  V  Q  *  M  V  I  G  F  E  A  S  T  *  R  G  C  R  Q  *  R  A  K  G  K  A  N  *  V  G  E  S  *  H  C  T  Q  Q  L  A  G  S  C  F  W  T  *  R  G  S  G  K  F  *  I  C  T  K  E  S  G  E  F  G  E  *  H  *  G  S  *  K  W  I  G  N  V  V  Q  A  F  D  P  D  K  G  V  S  T  Q  H  T  F  S  Q  *  I  N  *  G  I  M  H  N  S  S  S  I  F  L  H  D  *  S  C  D  V  *  I  L  N  F  *  S  L  S  T  V  D  E  H  I  V  Y  S  I  S  S  *  G  *  R  G  L  R  N  M  D  K  V  F  Q  F  P  N  L  F  L  C  L  S  F  V  L  F  Q  F  Y  R  L  V  P  K  F  C  R  G  A  N  S  G  Q  D  *  L  L  F  G  L  E  A  Q  R  S  P  R  V  C  A  S  N  M  *  L  S  M  G  *  Y  D  M  S  R  P  I  Q  Y  F  S  P  L  R  D  F  S  P  F  L  C  M  F  I  L  Y  Y  I  I  H  *  L  M  D  L  I  A  H  C  V  *  N  L  *  I  F  F  L   : E  K  K  K  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="-"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143348" stop="142359"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>987</number_coding_nucleotides>
                  <number_encoded_amino_acids>329</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HEHNLFCKRKKKMNLSTIRTMAALSPRSHSHNSYRTRCVSFPARSHPSTIKIEQVLNKIKTWESSSPLSPKAEEKTQNALSSGLVELYECIEELLALPMTQRALLQHQDDNFVKELLERSVRFIDICSNTRDTVMCLKESVRELQSALRRSKAGDDLLTIEGSVSAYISSRKNAQKEIEKSLTILKQIHNTPSATMKDSQLSAIIRVLEDASFTTISTFQSLLMFLYVPASKPKSNKWSLVSKLVHKGVVGSEGQREKLTELEKVDTALNSLLDHVSGHEEEVESFEFAQKNLENLESSIEDLENGLEMLFKLLIRTRVSLLNILSLSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="+" PGL_start="149030" PGL_stop="149608"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="149030" e_stop="149608"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="149030" e_stop="149608" e_length="579"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="149030" stop="149607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="149060" stop="149608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710268" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCCAAAATTGCTGCTACTGTGTTAGACAATGGCCAACAAGGTTTCCAATTTCTCGGATCTGATCCAACGTGTCACTGCTTCTTGCTTGCTCCACCCACTTTCCTCCAACGGCCACATCTCTGGTGCTCGTGACGCCGACGAATCTGAAGATGACAAGTACACTACCGAAGAAGAAGAAGAAGAACACTCACCTTATGTGGAAACTCTGGAAAAATTCCAGAATTTCGAGGTAAAAAATGAGGAGATAAGAACTGAGAAAGTAAATGAAATGGAAATGCTTTTAGGGGAAGTGTTTGATGCAGTGTCGGCAATGAAGAAGGCTTACGTTAGTCTACAGGAGGCGCATTGTCCTTGGGATCAGGATAAAATGCGCGTGGCTGACGTGGCTGTGATATCTGAACTGCGAAGGCTTGGAGTGTTGAGGGAAAGATTCCGGCGGAATGTCGGCGGTGGAAGTGAAAGAGGGGACTGGAGAGTCGGGGTGGCGACGCTGAGAGAAGTGGTGGCGCCGTATGAGTCAGCCGTGGAAGAACTGAAGCAAGAGGTGAAGGCAAAGGATATTGAGATCGATGATTTGA</gDNA_template>
            <first_frame> S  Q  N  C  C  Y  C  V  R  Q  W  P  T  R  F  P  I  S  R  I  *  S  N  V  S  L  L  L  A  C  S  T  H  F  P  P  T  A  T  S  L  V  L  V  T  P  T  N  L  K  M  T  S  T  L  P  K  K  K  K  K  N  T  H  L  M  W  K  L  W  K  N  S  R  I  S  R  *  K  M  R  R  *  E  L  R  K  *  M  K  W  K  C  F  *  G  K  C  L  M  Q  C  R  Q  *  R  R  L  T  L  V  Y  R  R  R  I  V  L  G  I  R  I  K  C  A  W  L  T  W  L  *  Y  L  N  C  E  G  L  E  C  *  G  K  D  S  G  G  M  S  A  V  E  V  K  E  G  T  G  E  S  G  W  R  R  *  E  K  W  W  R  R  M  S  Q  P  W  K  N  *  S  K  R  *  R  Q  R  I  L  R  S  M  I  * </first_frame>
            <second_frame>  P  K  I  A  A  T  V  L  D  N  G  Q  Q  G  F  Q  F  L  G  S  D  P  T  C  H  C  F  L  L  A  P  P  T  F  L  Q  R  P  H  L  W  C  S  *  R  R  R  I  *  R  *  Q  V  H  Y  R  R  R  R  R  R  T  L  T  L  C  G  N  S  G  K  I  P  E  F  R  G  K  K  *  G  D  K  N  *  E  S  K  *  N  G  N  A  F  R  G  S  V  *  C  S  V  G  N  E  E  G  L  R  *  S  T  G  G  A  L  S  L  G  S  G  *  N  A  R  G  *  R  G  C  D  I  *  T  A  K  A  W  S  V  E  G  K  I  P  A  E  C  R  R  W  K  *  K  R  G  L  E  S  R  G  G  D  A  E  R  S  G  G  A  V  *  V  S  R  G  R  T  E  A  R  G  E  G  K  G  Y  *  D  R  *  F   </second_frame>
            <third_frame>   P  K  L  L  L  L  C  *  T  M  A  N  K  V  S  N  F  S  D  L  I  Q  R  V  T  A  S  C  L  L  H  P  L  S  S  N  G  H  I  S  G  A  R  D  A  D  E  S  E  D  D  K  Y  T  T  E  E  E  E  E  E  H  S  P  Y  V  E  T  L  E  K  F  Q  N  F  E  V  K  N  E  E  I  R  T  E  K  V  N  E  M  E  M  L  L  G  E  V  F  D  A  V  S  A  M  K  K  A  Y  V  S  L  Q  E  A  H  C  P  W  D  Q  D  K  M  R  V  A  D  V  A  V  I  S  E  L  R  R  L  G  V  L  R  E  R  F  R  R  N  V  G  G  G  S  E  R  G  D  W  R  V  G  V  A  T  L  R  E  V  V  A  P  Y  E  S  A  V  E  E  L  K  Q  E  V  K  A  K  D  I  E  I  D  D  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149056" stop="149607"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMANKVSNFSDLIQRVTASCLLHPLSSNGHISGARDADESEDDKYTTEEEEEEHSPYVETLEKFQNFEVKNEEIRTEKVNEMEMLLGEVFDAVSAMKKAYVSLQEAHCPWDQDKMRVADVAVISELRRLGVLRERFRRNVGGGSERGDWRVGVATLREVVAPYESAVEELKQEVKAKDIEIDDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="149899" PGL_stop="150370"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="149899" e_stop="150370"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="149899" e_stop="150370" e_length="472"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="149899" stop="150370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404564" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAAATACGCACTGGAATCTTATGTGAACCGCAAAATGTTCCAAGGATTCGATCACGAGACGTTCTACATGGACGGAAGCTTGTCATCACTCCTCCACCCAGACCAGCACCGCCGGGAGTGTTATACACAGTACAGGGACATGAAAGCCATGGACCCAATGGAACTTCTGGGAATTCTCCCAACTTGTAGTTTTGGGAACTTCTGTTTCAAGAAGTATTTGGCCATCGTGCATCCTAAAATGGAGGAGTCTTTGTTTGGTGATTTGGAGCAGAGGCGTCAGGTACTGGCTGGGAACCATCCGAGGAGTCAGTTTTACGGAGAGTTTCTTGGGCTAGCAAAGGCCGTTTGGCTGCTGCATTTGCTGGCCTTTTCTTTGGATCCTCCGCCAAGTCACTTTGAGACAAGCAATGGATCGGAGTTTCACCCCAAGTACATGGAAAGTGTGGTGAAGTATTCCATTTCCATGGGGA</gDNA_template>
            <first_frame> A  K  Y  A  L  E  S  Y  V  N  R  K  M  F  Q  G  F  D  H  E  T  F  Y  M  D  G  S  L  S  S  L  L  H  P  D  Q  H  R  R  E  C  Y  T  Q  Y  R  D  M  K  A  M  D  P  M  E  L  L  G  I  L  P  T  C  S  F  G  N  F  C  F  K  K  Y  L  A  I  V  H  P  K  M  E  E  S  L  F  G  D  L  E  Q  R  R  Q  V  L  A  G  N  H  P  R  S  Q  F  Y  G  E  F  L  G  L  A  K  A  V  W  L  L  H  L  L  A  F  S  L  D  P  P  P  S  H  F  E  T  S  N  G  S  E  F  H  P  K  Y  M  E  S  V  V  K  Y  S  I  S  M  G  </first_frame>
            <second_frame>  Q  N  T  H  W  N  L  M  *  T  A  K  C  S  K  D  S  I  T  R  R  S  T  W  T  E  A  C  H  H  S  S  T  Q  T  S  T  A  G  S  V  I  H  S  T  G  T  *  K  P  W  T  Q  W  N  F  W  E  F  S  Q  L  V  V  L  G  T  S  V  S  R  S  I  W  P  S  C  I  L  K  W  R  S  L  C  L  V  I  W  S  R  G  V  R  Y  W  L  G  T  I  R  G  V  S  F  T  E  S  F  L  G  *  Q  R  P  F  G  C  C  I  C  W  P  F  L  W  I  L  R  Q  V  T  L  R  Q  A  M  D  R  S  F  T  P  S  T  W  K  V  W  *  S  I  P  F  P  W  G </second_frame>
            <third_frame>   K  I  R  T  G  I  L  C  E  P  Q  N  V  P  R  I  R  S  R  D  V  L  H  G  R  K  L  V  I  T  P  P  P  R  P  A  P  P  G  V  L  Y  T  V  Q  G  H  E  S  H  G  P  N  G  T  S  G  N  S  P  N  L  *  F  W  E  L  L  F  Q  E  V  F  G  H  R  A  S  *  N  G  G  V  F  V  W  *  F  G  A  E  A  S  G  T  G  W  E  P  S  E  E  S  V  L  R  R  V  S  W  A  S  K  G  R  L  A  A  A  F  A  G  L  F  F  G  S  S  A  K  S  L  *  D  K  Q  W  I  G  V  S  P  Q  V  H  G  K  C  G  E  V  F  H  F  H  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0060J03.2" strand="+"/>
                <serials PGL_serial="28" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149899" stop="150369"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKYALESYVNRKMFQGFDHETFYMDGSLSSLLHPDQHRRECYTQYRDMKAMDPMELLGILPTCSFGNFCFKKYLAIVHPKMEESLFGDLEQRRQVLAGNHPRSQFYGEFLGLAKAVWLLHLLAFSLDPPPSHFETSNGSEFHPKYMESVVKYSISMG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 420 chains have been computed
$ 
$ memory statistics:
$ 3166288 bytes spliced alignments in total
$ 282 spliced alignments have been stored
$ 11227 bytes was the average size of a spliced alignment
$ 54400 bytes predicted gene locations in total
$ 28 predicted gene locations have been stored
$ 1942 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 476 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 20:00:43
-->
