<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-27 19:49:53"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563634" ref_strand="+" ref_description="SGN-U563634 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|157358991|emb|CAO66893.1| (e_value=1e-87) unnamed; (*ATH) AT5G46420.1 (e_value=2e-78)  Symbol: None | 16S rRNA processing protein RimM family, contains weak similarity to Swiss-Prot:O74933 UDP-N-acetylglucosamine pyrophosphorylase (Candida albicans); contains Pfam profiles PF01782: 16S rRNA processing protein RimM, PF05239: PRC-barrel... ; (*SWP) sp|Q7V4K0|RIMM_PROMM (e_value=1e-30) Probable 16S rRNA-processing protein rimM OS=Prochlorococcus marinus (strain MIT 9313) GN=rimM; ">
      <seq>agaaaacatgcaaggctcctctgctctttcctgttcttcaaattctatctctgctccagttggtctttgttgttctcaaagattaacacttccttttcgaaatcaaagaattgggtttctggaaaatccatcaagcttgaagattttccattttcaccgaaacactaccctccctttgctgaactgcactgctacggaagagatcgtggaggctagtgaaacagagggattatttgttgaaactgggtacatatatagtgttcatgggcttcaaggtgaggttcgagtaaaagcgacaactgatttccctgaattgcgattttcccagccaggaaggcgatggttgaggcagcaagttacagggagagatatgattcaagaaatcgaactagtggagggaagaggtcatccaggacagaagagttggatacttaaattccacgagattaacacaattgagcaggcccaaaaacttgtggggtcggccttactggtgaagaatgaagatagaccaatcctggaggaaggtgaattttacacccctgaccttgttgggatgaaagtatttctaaaggaaactagagaactggtaggaactgttattaatgttttcaacagtggagctagtgatctcctacatgttgagcttctaccgaatcaaaatgcaagaccacagttggaaggaagtgcatctggtcctcttgtatgggtccctttcgttgaagcaattgttccaaatattgatttgagtaaaagggaaatgctgattacacctccaaagggtcttttagaattgaacatccgtgcagatgagaggtccaagaaagagaggcgacagcttgaatggaaagagagaaaaaagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="15658" stop="9759"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15358" g_stop="15168" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13373" g_stop="13237" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="328" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13236" i_stop="13146" i_length="91">
            <donor d_prob="0.017" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13145" g_stop="13011" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="463" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413">
            <donor d_prob="0.584" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12597" g_stop="12487" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="574" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12486" i_stop="12377" i_length="110">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12376" g_stop="12110" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="841" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12109" i_stop="10084" i_length="2026">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10083" g_stop="10059" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="842" r_stop="866" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-U563634" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563634" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15358" e_stop="15168"/>
          <exon e_start="13373" e_stop="13237"/>
          <exon e_start="13145" e_stop="13011"/>
          <exon e_start="12597" e_stop="12487"/>
          <exon e_start="12376" e_stop="12110"/>
          <exon e_start="10083" e_stop="10059"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTGGTAAATCTTCTTTCCATTAAAGTTTTAATCTTTATTGATTTTTGAGTTTCCATAATGCTTACTTTGATTTTTTCTGACTTTTTCCGAACTGGGTTGTGTTTATTTTGGTAGTATCAGAAATTACTCACTTCCAAGTATATACTGTTTTCAACTGAATTCTGAAATATGTTCTCAAGATGTTATGCTTTGCTTTTGTGGATTTTATGTTCCTTTGAATTATCATTAGTATTATGTTCTGACGAAGTGGTGTCCCTTGTCCAGCCAGCTTGGCAAGATCCTCTTGGTCTGGTTTAGAGATTGTATGTCGATATAAAAATAAGCCCGTGGCTGTGAGATTTAGAGAGTCTGAATTTTTCAGAGAACCCCTAATTTGTTTTAAAGAAAAATTATTGAGTATTGGAGTGAAATGGGTCCAAATATGGGGTGAATGGATGTTGAGGGTTAATATAGTGGACCAAAATTAGTTTAGGATTAACAAGTAGTAGTAGTAGACGACTAGTTTTTGCTGCTGAATAACACGTCAACATACCCAGTGTAGTCCGGGGGGGGGGTCTGGAGTGGGTAGAGTGTACGTAGGCCTTACCCCTACCTCACGGAGGCCTCTGCTGAATACATGCTGCTTAGTATAAAAGTATAGGTACATAGTATGGGATTTGAGACTTATCATTGGACATGTCCTTCTCAGTTCAGCTTATTTCTACATTCCTCGACTTCGTTTTGTTTCTTTTTGTAAGTTTGTTCTGTGGTTTGTCTATTTGTTGGTTCTAGTTTTGAAGCAGGAGCATCTTCAGATAATTCTATCAAGTTAATTGTACTTAAAGTTAGTCATTACTTCACAGTTAGGCAAATTAAGTTAATGTTGGCAACACATTATCAGATTAATGTAAGGTAGATTTATCTAATATCAATTTCTTGGGTCAGATCTTTTGCTTTTTTTAGTTTGCTATTTATGTCTTGCGTAGAAGTAAAGCGTCTTGGCAACTCATATTATGCGGCTTTGTCCCACAGTGACACTTCTGGCTTCATACTTAATCTTGTAGTTGCACTCTGACAATTGCTTTAGAATCCATACCGAAGATCGAAAGTGAGAGCATCATTATTTAAGGCAAAAGATGCAAAAGTACAGTAGGAGATGAATATTTGTTCTTTTGGTAGGTTGGATATACATGAACGGTAACTCAAGACACATTTATGTTTCTTGCCTATCCCAAACAAGGTACAGTGACCACGACCCATCAGAAGACACTAGGTTTAATAGAAGTTTTGGAATTGAGCAAAACCTTGAATTTTGTGCTGTTATTTGCTGTTCTATTGACATTTCACTTGAGCTGTTTCCTTCAATGACACACCGGCTAATCATTACTTTTATCTTCTGCAAGTATATGTTGTATATTTGAGCTATCTTAAGTATCACATCTTGTGATTGTTGTCATTCTACACCCTTAAGCTTAAGCAAGTGTGAGGTAATCTTTGAATTTGTAAATTCTTACAAATTCCAGTTAAAAGTTTCCCGAATCAAGTTAATCACATAACATAGAAAAATCATGTATGATGTTCTTCCTGGAAAGATATCATCTCATAATAATGTACGCTTTCTACAAATTTGTTACTCATCATGATATACCAAGTCATGTGAATTAGTTATCAGTTACAGAACGCAGTGCTTAGACTGTCAAGCATCTTAATTATGCTAGAGTATCACAGTAGTTTTCATTCACTAGAAAGTTTTCTTTATAGTTTCTGCAAAGTCACTTGGTCCTCAAGTTAAGCACCTTTATTGTTTGTTCATTTCAGCTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAGGTAGAAAGCATCAGGAACTTAATAATGGGACTGGTTTCTCGTTTTTGGCCTTCATGAGAATATCCTTTTCATGAATTCACTCTTAATTTAGCCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAGGTGATCTCCGTGTAATTATGCTGTACATTGGGTTTCCACAACCCACACTATTGTTTTTCCTCATATATTATGGAATGCAGTAAATATGTCTTTTGATTATAATGACCTTATCTTTCCTGTGTTAAATTAATTTTAAATCATGCATGTACAATCACAGTATTTCAATACAGCAAAGTGGCAGTGTCATGTAAGAAAGTTGGAAGAATTTTATATGACTTTACTACCGAATCGAAAATATTTGGTTCATCTTTTGTAAATAAAGGCAAATTTCACTCTGCCCATTAAATACGGAACCATTACTACAATTCTAATGCCAGTTTTATGTATCACCTGAGACATATTTTGGAAATGGACTTGATCTTTATCTTAGGGCATGGCCGTTTGATATATCTTGTTTTCTCGATTCTCCTCAGGCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAGGTTTGTTTCCACGGCTTCTGACTTTCATAAAAGGCACACAGTTCTTTAGTTTAATTTCTATTGGAGCTGAGTGGCACTTAAAAGGGATCTTCTATTTTTATGTGCTCCAGGAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTTGTGAGTTGCTTTTCTTTTTTCTCCCATTTTGCCAGAATTTATCATATAGGTCACATGCTATTGCGGAGTGCTGTCAGTGTGGTTTCAGAAATCATAATTTCTTTTAAAAGAAATTTTATTTATCTTTGATTCTTTTCTAGAGAAGCAACACCTTGTGAGTTGATTTTGTTTGTGTTCACTTTTCTAGAATCAGAGTGCTGTCTCAATCATTTAAGAAGTCACTTTGCCATTTTCAAAGAAATTCTAGCTACTTTTTCTCAAGTACTCTGATTGGGTTTTTTCATATTCATTATTGGTTACAAGTTACTCTTGTGTGGTTTACTTTATAAATTTGACCAATCACAGACGTGCGTAAAGCAGTCAAGTTTAATTTTCTTCTTCTTGGCGCCTTCTCTAGTACTCCTTATGCTTCGTCTTGCTACACACCTCTTTCAGGGGTAGACCAGATACAATACCTTCAGTTTGGAAGTAATTAACCAAAAAATTATAGTTTTCCTTAGATTTTTGGTAAGGAATTATAGCTGCCCTCAAAACACATTTTGTTTCATCTCTTTCGGTATCTTCCTGGATTTTTGGCAGTATAGAAGCCTCCACTTTGTTCATCCCATTTGAATCTATTATCTTCACAGGGAAGTCCCTGAAAACTCCCATTTGTACTGTAAAATTCAGCAACTGTCACCAATTGCCAATCGTTGAAATGTCTTCTGAATCTGATGTTTCATATCTCATAGTCCCTGGATTCTGCTACAGTAGCTTCAGGGTACTGAATCAAGTTGAAAAAACAAAAGGAGTTGTATTTTTGGATGATTGTGGACTATCCATTTGTCATGACATAAGAGACTTTCCTTCCATTACTCCCGATGATGCTTGTTATTTGCAAAACTCAGACCACATCTTGCCAATAGGTGGTTTCTTATCTTAACCTATATGTGTTGTTTGCATCCTCTGCCAGGTGTAATCATTTCTAATCTTGCCCAACATCTTTTAAAGACAAATACATCTCAATGTTCACATTTCTATGACACTCATCCTATGAATAATTAGACCTTAGCAGCCTAACTTTTTTTTTTTTATCAAAGCCATGGAAACCCAACATTTACTCCAATATAACATTGCTGGCCTTACTGCCGTTAAATAATTTTTTTTAGGTACTTTGTAGTTGCACGGAAATCCACATCACTTATTCATTTCAGTCATCCTATATTTAATTTCTGTGTTATATCTTCATCTATCATGTCTTTTTTCTTTTAAGGCCAAGTTTAACGGGGTTTATCTTTATAGCTGCTTTACAGGTTTTTGGTCTGTTAGCTTCATGTTACTTTCATGTTTGAAGCAACTTTATTTTCTCTATAACCTTTGCTCCTTGATGCCTTTCTAATACAGTTTAGTCTTCACCAAAAAAAAAAATCTAAAAAGATTCTGCATTTAGGCACAACAATTACATCGAACCTCACTTTGCCTTCATTCTTACTATGGAGGCAAAACTTGCATATTAGTTCTACTTATCCTAAAACCCTTACTTAATGGAGTGTATTTCAATATTTTCAACTTTTTATTGATTCACTCCCTCATTTAATCAATTGACAATTATCTGCAAATAACAGTTCCCGTATAAAGTGAAGTTAGATGACTGTAGCCACTTGTTAGAAGATGGCGGTTGCGCCACCATATATTCACATCATTAATAGTTGTTAACTCCACAATGGTGAGATAAGAACAAGGTGAATTTGGTTTGTGCAGAAGGATAAATTCTTTAACATCTAAATAAATGGTTACCCACTTCTCCTCATAAGAATGTAGTGCAGTGATTATCATTAAATAGATGTCATAATTTTCTTATCCGAGCTCAATGACAAAGTAATTCTTGATGGAGAGTTCATACTTAGCTGTTCCAGATGAGTGCCGGTCATTAAGTAATGCCTCTAAAGTTGCTTTTCTCTCCGGTGCTCCTCTGTGATTGTCGTAGGTACTAAATCTATAGCATTGATCTAGTGTGTTTGGCCTACTTAACCTTCTTCTTTTTCAGGAATGGAAAGAGAGAAAAAAGTCTC</genome_strand>
        <mrna_strand>AGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAG...........................................................................................CCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG..............................................................................................................GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGAAAGAGAGAAAAAAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U602890" ref_strand="+" ref_description="SGN-U602890 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|47834705|gb|AAT39006.1| (e_value=3e-93) AML1 [Solanum tuberosum]; (*ATH) AT4G18120.1 (e_value=2e-40) | Symbol: None | RNA recognition motif (RRM)-containing protein, Mei2-like protein, Arabidopsis thaliana, gb:D86122 | chr4:10038890-10042023 FORWARD | Aliases: F15J5.90, F15J5_90; ">
      <seq>tttttatggagtttatgttctgatattctgaagatgccaatgataaatgtatctaaagaaaagggaagaacaccatgggagattcgtccaggatctaattccgtccttatcactaatgatgcctctcttttcacaagctcagtgcctgttcttcaacatgagaagctgaaagtaagtgacggcgaccatggtcatcaatccgttgatgatgcatcaccaagcttgacaattcacccggatgtagaggttgatgtgctgttggatgatggtgaaaatcgtgcaattggaagcttgcttccagatgatgaggatgaacttttagctgggataatggatgggtttgaccctagtcagcttcccaatcacacaaatgacttggaagagtatgatttttttgaaagtataggaggcttagagttggagtttgatggtcaggaacacttaaacctgggtatatcgagagtaagtctggctgatccagatagcaatggagctgctatttatggactttcaaatggtgggggtgcggttactggagaacatccacttggagagcacccttcaagaacattatttgttcgcaacataaatagcaatgttgaggatgctgagctaagaactctctttgaggttagttgctttacactggataactatgatctttgtaatttcacgtgaccctcttttncnggttttagtgntcattcctgangtgtttcctgcatatgtataaatagtttcatgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="21846" stop="25099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22146" g_stop="22167" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22168" i_stop="23974" i_length="1807">
            <donor d_prob="0.753" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23975" g_stop="24118" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="166" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24119" i_stop="24218" i_length="100">
            <donor d_prob="0.496" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24219" g_stop="24799" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="747" r_length="581" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U602890" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22146" e_stop="22167"/>
          <exon e_start="23975" e_stop="24118"/>
          <exon e_start="24219" e_stop="24799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTATGGAGTTTATGTTCTGGTAATTTTTAGCCATTTTTTTTACTCTTTTCTTTTCTTTAGAGTGGTTTGATTTTGCTACCTTCTGCTACTGTTGTTGAGGTTTTTTCTTTTGTTTTACTTCTTTTAGGCTTTGTTTGGCCTAAATTCTGAATCTTTTTTTGCGGGGTTGTGTTGAAATTGAAGTTTGGAAGTTGTTTTTTTTTGAGGGTGTGTTTGGGTTGTTCGGTTTTAGTCTAGTTATTTAGGTTTTAACTTTGCTGAGTGTTTCTTGCATGTTTTTTTTTTCTGTGTAAGCTTTTTTTTTTTTGTTTGATGATGTTTATTTGTTGTGTGCTGGTATTGGGGTTTGAGAAAGTTGGGAACTTTAATTTCAGTTAAGTGGTTTTGTAAATGGAGTAAAGAAAGAATCTTTAACTGATGTCTCTAGAATTGGAATTTGTTGTTTTAGGTGCCTGTTGAGTAATGAGGTTTTTTTTCTTTCTTAGGGAACACTTTTTTGTTTGTTTGTTGATGTTTAGTTCTCGTGTGCTGGTATTGGATTTTGAGGAAGTTGGAAACTTTAACTTCATTTAGGTGGTTTGTAATGGAGTGAAGAAACGATCTTTAATCTTGTACCTCTAGAAATGGAATTTGTTGTTTTATGTGCCTGTTGAGTAATGATTTCTTCCGTCAGTCTTGGTATTGGTAGGGTTAAGGTCCGGCTCAGACCCCATTTGTGGTTGTTGTTGTACTTTTAATGTCTAGAATTAGAGCTTTGGCGAGTGGTTGTGCTTTTTTTTTGTTATGAGATGAATGAATTTGTCCAATAACTGATGTTGGTCTAAGTTCTTCTGTCTCATTGTTTATTCCTCAACTTTTATGTTCAGTTATCTGGGAAGTTGTTTACTGCAGATTGGGAAGAATAGATGTTTGCCGAGTAGGCTGATCGGTATCTTGGCCTCATTTAGTTATTACCAAGGTACAAACATGGAGTCAGGTCTCCATTAGGAATTGAAAGTTGCTTTTGAAAAAAAAAGAAAGACTAGTTCTTTAATTAAAGTTGGTGTCTCTGGGGACTCTCTACGAGGTAGGGTTAGGGTTTGCGTACACTTATGCTCCTAGATCCCACTTGTGGGATTACACTAGGTAAGTTGTTGTTGTTGTCTTTGGGGGCATCTAGTGGGTCTAGAATTTTGAGGAGAAGCATCTTGCACCAAGTTGAAATAATTGATTGATTGGTGTAGCCGTGGACCCAAAGATGAGTATCATCTGTTTGCAAGTGTACAGCTTTACCCAAAATTTAAGAAGTTGAAAGCTGAAACAGGAGCAAGAGAGGTTTAGAATTTTTATTATGCTGTTATCTTTGCTCTCTATTAGAGCTGGTAAAGAGCTCTTAATGTTGTATCAACTAGCATTCCCAGCATGTATATCACACCTGTTTGGTTGTTATTTTTTTTGTTAAATGCTCTCTGGTTTCTTTAGCTAATGTATATGAATCCGAACTATGAAACCCTCCAATTATTCAGAAAGAAAATGAATAATGCAGATTAAATCACATAGCAAATGTGAAGGTGATAGGAGAGACTCAACCCCAGATGTTCCTCGCAATCACATAATGTTGACAATATCACTTGAGAATATACGCTAGTATGTTTTAGGTGGCTTGTGTGCACTTAATCTTAGCTGGATCGCTTATCAATTTGTTAAGATGGCTTTTTCTAGATTTTATTTTAAATGTAAAAGGCAGCATTGCGTGGACAAGTGTTTTCAACTATGCAATGGTCCCTGGGGATTCTCCAGAAATGATACTGTATTTATTAACCTTACCTAATTATGCTGCATTACAGATATTCTGAAGATGCCAATGATAAATGTATCTAAAGAAAAGGGAAGAACACCATGGGAGATTCGTCCAGGATCTAATTCCGTCCTTATCACTAATGATGCCTCTCTTTTCACAAGCTCAGTGCCTGTTCTTCAACATGAGAAGCGTATGAATACATTGATGAGTCTTGTACTCGTACTGCATATGCCCATTTTCTTTTGGAAAATCCCACATCTTCTTAATGTCTTTGAAATTCTTGGATGTAGTGAAAGTAAGTGACGGCGACCATGGTCATCAATCCGTTGATGATGCATCACCAAGCTTGACAATTCACCCGGATGTAGAGGTTGATGTGCTGTTGGATGATGGTGAAAATCGTGCAATTGGAAGCTTGCTTCCAGATGATGAGGATGAACTTTTAGCTGGGATAATGGATGGGTTTGACCCTAGTCAGCTTCCCAATCACACAAATGACTTGGAAGAGTATGATTTTTTTGAAAGTATAGGAGGCTTAGAGTTGGAGTTTGATGGTCAGGAACACTTAAACCTGGGTATATCGAGAGTAAGTCTGGCTGATCCAGATAGCAATGGAGCTGCTATTTATGGACTTTCAAATGGTGGGGGTGCGGTTACTGGAGAACATCCACTTGGAGAGCACCCTTCAAGAACATTATTTGTTCGCAACATAAATAGCAATGTTGAGGATGCTGAGCTAAGAACTCTCTTTGAGGTTAGTTGCTTTACACTGGATAACTATGATCTTTGTAATTTCACGTGACCCTCTTTT-CCGGTTTTAGTGCTCATTCCTGATGTGTTTCCTGCATATGTATAAATAGTTTTCATGAAC</genome_strand>
        <mrna_strand>TTTTTATGGAGTTTATGTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCTGAAGATGCCAATGATAAATGTATCTAAAGAAAAGGGAAGAACACCATGGGAGATTCGTCCAGGATCTAATTCCGTCCTTATCACTAATGATGCCTCTCTTTTCACAAGCTCAGTGCCTGTTCTTCAACATGAGAAGC....................................................................................................TGAAAGTAAGTGACGGCGACCATGGTCATCAATCCGTTGATGATGCATCACCAAGCTTGACAATTCACCCGGATGTAGAGGTTGATGTGCTGTTGGATGATGGTGAAAATCGTGCAATTGGAAGCTTGCTTCCAGATGATGAGGATGAACTTTTAGCTGGGATAATGGATGGGTTTGACCCTAGTCAGCTTCCCAATCACACAAATGACTTGGAAGAGTATGATTTTTTTGAAAGTATAGGAGGCTTAGAGTTGGAGTTTGATGGTCAGGAACACTTAAACCTGGGTATATCGAGAGTAAGTCTGGCTGATCCAGATAGCAATGGAGCTGCTATTTATGGACTTTCAAATGGTGGGGGTGCGGTTACTGGAGAACATCCACTTGGAGAGCACCCTTCAAGAACATTATTTGTTCGCAACATAAATAGCAATGTTGAGGATGCTGAGCTAAGAACTCTCTTTGAGGTTAGTTGCTTTACACTGGATAACTATGATCTTTGTAATTTCACGTGACCCTCTTTTNCNGGTTTTAGTGNTCATTCCTGANGTGTTTCCTGCATATGTATAAATAG-TTTCATGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U603875" ref_strand="+" ref_description="SGN-U603875 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|47834705|gb|AAT39006.1| (e_value=3e-83) AML1 [Solanum tuberosum]; (*ATH) AT1G29400.2 (e_value=1e-31) | Symbol: None | RNA recognition motif (RRM)-containing protein, similar to GI:6650523 from (Arabidopsis thaliana) | chr1:10290026-10294508 REVERSE | Aliases: None; ">
      <seq>ttttccttgtcaaatcatcaaaaatctttcctcaattcatctcagcaccaccttcatcatattggatctgctccatctggtctttcccttgataggcactttggtttttacccagactcgtcaatcttgagcccaggttttaggggcatgggtataggtactcgtgacgaaagtttgatggttaactatggttctcggactactttgaatgctggtgttgctgttccaaggaatatgtcagatactgcttctcctagatttggcatgatctcttcccaaaaacttagtccattgttcctaggtaatggtcatttcccaggacatgcagctactagctttgaggggctgactgaacgcagtcgcactcgacgtgttgaaaataataatgggaatcagatggataacaagaagctgtttctacttgatttggataagattagatgtggtgaagatactcggacaactntgatgattaaaaatattcctaacaagtacacctccaagatgcttttagctgctattgacgaacaacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="28359" stop="29579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28659" g_stop="29149" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29150" i_stop="29235" i_length="86">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29236" g_stop="29279" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="492" r_stop="535" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U603875" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28659" e_stop="29149"/>
          <exon e_start="29236" e_stop="29279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCACCTTCATCATATTGGATCTGCTCCATCTGGTCTTCCCCTTGATAGGCACTTTGGTTTTTACCCAGACTCGTCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTACTCGTGATGAAAGTTTGATGGTTAACTATGGTTCTCGTACTACTTTGAATGCTGGTGTTGCTGTTCCAAGGAATATGTCAGACAATGCTTCTCCTAGGTTTGGCATGATCTCTTCCCAAAAACTTAGTCCATTGTTCCTAGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAGGGGCTGACTGAACGCAGTCGCACTCGACGTGTTGAAAATAATAATGGGAACCAGATGGATAACAAGAAGCTCTTTCTACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACAACTTTGATGATTAAAAATATTCCTAACAAGTAATAGCAACTTCTCAATGTTTGTACATTGTTGTTAAGTATGTCCTATTTTCGTATGAGTGACAGTTGACCTTGTCTTTCTCCAGGTACACCTCCAAGATGCTTTTAGCTGCTATTGACGAACAACATA</genome_strand>
        <mrna_strand>TTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCACCTTCATCATATTGGATCTGCTCCATCTGGTCTTTCCCTTGATAGGCACTTTGGTTTTTACCCAGACTCGTCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTACTCGTGACGAAAGTTTGATGGTTAACTATGGTTCTCGGACTACTTTGAATGCTGGTGTTGCTGTTCCAAGGAATATGTCAGATACTGCTTCTCCTAGATTTGGCATGATCTCTTCCCAAAAACTTAGTCCATTGTTCCTAGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAGGGGCTGACTGAACGCAGTCGCACTCGACGTGTTGAAAATAATAATGGGAATCAGATGGATAACAAGAAGCTGTTTCTACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACAACTNTGATGATTAAAAATATTCCTAACAA......................................................................................GTACACCTCCAAGATGCTTTTAGCTGCTATTGACGAACAACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U583784" ref_strand="+" ref_description="SGN-U583784 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|47834705|gb|AAT39006.1| (e_value=1e-15) AML1 [Solanum tuberosum]; ">
      <seq>cagaattcaagtttgatgaatgaagataagcgatgtaggccaatccttttccactcagaaagttcagaattgggggatcagattgttcaggaacatctttcatcaggctgcagccaacctgaggatccagttggcaaattggagaatcgctagcagtagcattgaaatgttttttttttgctcgcggctttaagagtgcagctggctagtacaagtgtgagatacatgtgcagagtagcatgatttgaggcacagaatagaagtatgaagatcttttgtattataatgagtaggtgtttttggttcaaaatctaagagggggagggttctgttagactaagtacatcaagcatctgtgtagttcatgttgtaatcctatggcaagttgaaatggcaaaggctatctcaacatggcatgcaaggtcgtagttttgtaacattgttttggtggttagagtgaagaggggatgcttgaaatttgtaaagtgggaaggcaagctgggctgttgttttgtatcaaacaacgcattttggtatttatgtgaaacttgctagaaaattgcataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="29489" stop="30847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29789" g_stop="29869" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29870" i_stop="30060" i_length="191">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30061" g_stop="30549" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="571" r_length="490" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U583784" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U583784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29789" e_stop="29869"/>
          <exon e_start="30061" e_stop="30549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATTCAAGTTTGATGAATGAAGATAAGCGATGTAGGCCAATCCTTTTCCACTCAGAAAGTTCAGAATTGGGGGATCAGGTAATATAGACCATCTTGTTTAGAATTAAGCATGCAAAATGTAACTACTGTTATGTCATGCATTGCGATTCAGCTAGCTTTGATTTTTTCCCCCTAATTTTCAGGCTATATGCTTGTTGAGATGATAATATTGAAACTGCATCTTTTTCATCACAACATAATCGTATCTTAAGATGAAAACTTGCCTGCAGATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAA-GCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAATT</genome_strand>
        <mrna_strand>CAGAATTCAAGTTTGATGAATGAAGATAAGCGATGTAGGCCAATCCTTTTCCACTCAGAAAGTTCAGAATTGGGGGATCAG...............................................................................................................................................................................................ATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAACGCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584357" ref_strand="+" ref_description="SGN-U584357 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|6708129|gb|AAF25812.1|AF178571_1 (e_value=0) phytochrome; (*ATH) AT2G18790.1 (e_value=2e-158) | Symbol: None | phytochrome B (PHYB), Identical to SP:P14713 Phytochrome B {Arabidopsis thaliana} | chr2:8146963-8151512 FORWARD | Aliases: MSF3.17, MSF3_17; (*SWP) sp|P55004|PHYE_IPONI (e_value=0) Phytochrome E OS=Ipomoea nil GN=PHYE; ">
      <seq>accaactgaagcacaagttaaagatattgcacagtggttactagttgctcataaggactctacaggtttaagtaccgactgccttgcggatgctggttatcctggtgcggctttactgggagatgctgtttgtggcatggctactgcgagaattacttccaaggattttctattctggttcaggtctcacacagctaaggaagtcaagtggggaggtgctaagcatcatccagatgataaagatgatggaggaaaaatgcacccacgatcttcatttaatgcctttcttgaagtggttaaaagcagaagtttgccatgggagattccggagattaatgccattcattctctacaaatcataatgagagaatcaatccaagagaacgaaaacagctctctaaaaactttgactacttctcaacagaatgatgctgatgggccaagcatggatgagcttagttctgtggcaatggaaatggttagattgattgagacagccactgctccaattttcggagttgatccatctggcttaataaatggatggaatgagaagattgctgacttaacaggattgcatgctagtgaagcagttggaatgtctctcattaatgatattactcatgaagattcacgtggaactgttgaaaaagttctacatagagctctgttaggtgaggaggaaaaaaatgtggaaataaaactgcgaaggtttgggaaagatccaccaggatcagttatataccttgtgatcaatgcctgcacaagccgggaccacaaaaatggtgttgttggtgtgtcctttgtggctcaagatgtcactcctgagaaatttatcatggataaattcatacagttgcgaggagattatgaggctattgtacaaagtcttagtccattgattccaccaatatttgcttcagatgaaaatgcttgttgttcggagtggaatgcagcaatggaaagattgactggttggacaaaatatgaggtcatggggaggactcttcccggtgaagtttttggtggtctttgtcgtcttacgggacaagatgcccttacaaaatttatgattcttttctaccaagcaattagtggtcatgacaccaaaaagcttccctttggcttttttaataggagaggagagtttttggaagtgttcctaacagcaaacaagagaactgatgaacatgggaatgtatgtgggtgtttctgcttcctgcagcctatgacgattgacccagaagcatcagatgagagacaagactctaaagattctctttggaaatataaagaatatgtttatgtactacagcagatgaaaaatccactgaatggaatccagtttacccataaacttcttgaagcaaccggtgtttcagataatcagaaacagcttctggagacaagtgaagcctgtgagaaacagatactgtctgttattgacaatatggatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="35746" stop="33217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35446" g_stop="34773" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34772" i_stop="34302" i_length="471">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34301" g_stop="33517" g_length="785"/>
          <reference_exon_boundary r_type="cDNA" r_start="675" r_stop="1459" r_length="785" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-U584357" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35446" e_stop="34773"/>
          <exon e_start="34301" e_stop="33517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACTGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGACAGCCACTGCTCCAATTTTCGGAGTTGATCCATCTGGCTTAATAAATGGATGGAATGAGAAGATTGCTGACTTAACAGGATTGCATGCTAGTGAAGCAGTTGGAATGTCTCTCATTAATGATATTACTCATGAAGATTCACGTGGAACTGTTGAAAAAGTTCTACATAGAGCTCTGTTAGGTACTTCTTATGTTGACTTAATAGCAATCATTAAAATTTGGATACGTCCTTAATACTACATGGCTATAATTCTATCTATCTGCTCATGGTGTTATTTTATCTGCATTCTTTATGCATTGCAGTCATACATGATAGCATATCTTCTTAGATTTGAAATTCAGGCGTACTGGTAAGAGAATTGGCTACCTACACTTATTCAATTGGCCTTTCATCTTGTTTGTTGTAATATATACGTAGTTACCTGCATTACTTGGGGCGATATTATGCTTTCAGCATTGACTAGTCGGTCATCTCCACTGCATAGTAGACTTAGGTTGCTCTTTCAGTGCACTCTTTTAGTTAAAATAGATATTTTTCCTCGTCTGGGTAAGTCAAAATTGACTGACAGCCTGAGCACAGAAGTTTCCACTAACATTCCCCAGCTTGTTCTCACTCCCCACCCTCTCTCTATCTTTGTCACTTGTGATTCAGGTGAGGAGGAAAAAAATGTGGAAATAAAATTGCGAAGGTTTGGGAAAGATCCACCAGGATCAGTTATATACCTTGTGATCAATGCCTGCACAAGCCGGGACCACAAAAATGGTGTTGTTGGTGTGTCCTTTGTGGCTCAAGATGTCACTCCTGAGAAATTTATCATGGATAAATTCATACAGTTGCGAGGAGATTATGAGGCTATTGTACAAAGTCTTAGTCCATTGATTCCACCAATATTTGCTTCTGATGAAAATGCTTGTTGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCGCTTTGGAAATATAAAGAATATGCTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGATTTT</genome_strand>
        <mrna_strand>ACCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACCGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGACAGCCACTGCTCCAATTTTCGGAGTTGATCCATCTGGCTTAATAAATGGATGGAATGAGAAGATTGCTGACTTAACAGGATTGCATGCTAGTGAAGCAGTTGGAATGTCTCTCATTAATGATATTACTCATGAAGATTCACGTGGAACTGTTGAAAAAGTTCTACATAGAGCTCTGTTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGGAGGAAAAAAATGTGGAAATAAAACTGCGAAGGTTTGGGAAAGATCCACCAGGATCAGTTATATACCTTGTGATCAATGCCTGCACAAGCCGGGACCACAAAAATGGTGTTGTTGGTGTGTCCTTTGTGGCTCAAGATGTCACTCCTGAGAAATTTATCATGGATAAATTCATACAGTTGCGAGGAGATTATGAGGCTATTGTACAAAGTCTTAGTCCATTGATTCCACCAATATTTGCTTCAGATGAAAATGCTTGTTGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCTCTTTGGAAATATAAAGAATATGTTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572002" ref_strand="+" ref_description="SGN-U572002 Tomato 200607#2 [28 ESTs aligned] (*GB) gi|157358995|emb|CAO66897.1| (e_value=3e-149) unnamed; (*ATH) AT5G46410.1 (e_value=3e-93) | Symbol: None | NLI interacting factor (NIF) family protein, contains Pfam profile PF03031: NLI interacting factor | chr5:18842330-18846448 FORWARD | Aliases: MPL12.21, MPL12_21; (*SWP) sp|Q54GB2|CTSL2_DICDI (e_value=3e-54) CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2; ">
      <seq>ggagagagagaaaagcgcgcgtctagagagagaaagtgagagagacgcttggtgactctaccagtctcttgtggctgatactatatctgcttgaaggggttttgaatccctactgatgctttcagatcaagattgtgctacacattccaagtacgaatcaaatgccatctctaagaatgaagacaaagctagccacatccagttcgaaagaaaaaaatggtctccatgtctgtccaaattctagtgtcatatccaagagttctctctctcgaaccagaagtgtgcagaatgcagacgaagttgcagatctgattcacaatactcatgatgttcctagctactacaaagttcatccacaccaagtcggaagaaatggtgatcatgctaatgatttggtagatgaccttcttgaaaagcaacagccacctgttactgattctgcaaaccttgataccacggttttggaatcggtgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatcttttcacctagtgtggagcctgttagtggtgcgcacagtgagtctgatataccaagtgatggagcaaacaatgatttttatgtaccccaattggagactgaagatagtgatagcagcagaagttcgtgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgtttcttgtttggctgttgagggtgaaaccatctatgataacagtttgactgacaggttcttggctgattacaagtgtgaagaaccaaatatttttaataatgttgatgaggaatacttgctgttgcctttccttgaagacactgcagcagctagctatagtcaagtgtgcagaacgtctagtgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatattcataagaaatttgccagacatattagagaggccaagtattttgccaaacgaatcagaaacatgcaaaccgatcaccctagtacttgacctagatgaaacacttgttcattctacactggagcactgtgacgatgcagacttcacatttcctgttttcttcagcatgaaagaacacattgtctatgtgaaacagcggcctcacctccggacattcttggagagagttgcagagatgtttgacattgtaatttttactgctagtcagagcatatatgcgaagcaattgttggatattctggatccagatggaaagattatctcaaggcgagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaagttgtcattgtagataattccccacaggttttcagattgcaagtgaataatgggattcctattaagagttggtttgatgatccttcagactctgcactaatttctttacttccattcctagagacactggctgatgctgatgatgtccgacctattattgctaagaaattcggtaacaaggaataagaggcccttgtttcttcctagtagttcctctaacacctcctctcttctcatttaaacaaatttatccttcatttacatgctcattgttctatcctcattgagccttgatataattggggtgtgcaataaaaatactagtccttttctggttgagtcagtttttttgtgcgcagtccttttcttgtttccaccctgttgacaactttcttcagtccattgcttactaatttgtttcaaatatagttgcaagaagttctccttgtgtgcactgtacagttatatttgcctagttatttacaagcttgtgtatatggattgatctattgtgaaataaatcgtgatttcgtgtttctttatcgtagcataaagctgtccgttggactaaattacacctgttcattgtatagcctttgcacaatctagtgtacttatcaattttgcagtaacacaagttcccaatcaaaggctaattggccaaaaacatcagggttggcagtcgaaataggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="49159" stop="56848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49457" g_stop="49520" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.326" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51114" g_stop="51379" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="330" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51567" g_stop="51694" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="458" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53685" g_stop="53808" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="582" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54090" g_stop="54611" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="1104" r_length="522" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54867" g_stop="55204" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1105" r_stop="1442" r_length="338" r_score="0.997"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="55881" g_stop="56548" g_length="668"/>
          <reference_exon_boundary r_type="cDNA" r_start="1443" r_stop="2110" r_length="668" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U572002" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2110</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49457" e_stop="49520"/>
          <exon e_start="51114" e_stop="51379"/>
          <exon e_start="51567" e_stop="51694"/>
          <exon e_start="53685" e_stop="53808"/>
          <exon e_start="54090" e_stop="54611"/>
          <exon e_start="54867" e_stop="55204"/>
          <exon e_start="55881" e_stop="56548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGAGAGAAAAGCGCGCGTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAGGTAATATAGACCTATAGATACAGAAATTTGTATCTCTTTGTGTGTATATATCTGACATCCATGAAATCACCTTTCACTGTTTCTGTGTATAGTACTGTTCATCTTATTGTTTTTTTTTGGGGAGGGTTTTTAAAGTTGGTAATTTGAGCTGTGTTTGGACTTTGAATTTTGTGTAGGGTTTTTGATCTGTTGATCATTTGTGGTTTTGGTTGTTGAATTATGTGTGATTCCTTGATTGAATTGATGAAAGTTGATTGAAGTTGACTTTGCGATCTTCTGGGTTTACTTTTAATTATTTTGGGGTTTTGGGTTTCTCTGTTCGAGTGAATTTATAGGCTTTGGTATGGTTATACGAGAATTTTATTACTGGTAAATTTTTATTTTTTTCTTAATTTACGAATAAAATTTAATTTTCTGAAAATATTCTGGAAATATGGAGTATTCATCTGTTTTCTTGACCATATGTGCAGTGTTCTGCTTTTATTTTTTTTTATTATCTTTTTTTTTTATAAAAAAACATTGGGTAAAAAGGTTCAATTTTTATTTTGAATTCTAGGAACTTAGGAAAATAAGTCTTTGTTCTTGTAGATCTTAATTAAAGATGGTTTATCTGGACTATATGGGCCGTGTGGTGGTTTATAGGTTTCCTGATAGGTCTGAATTAGGTTAATTTGAGGATTATTTAGGATTCCATGAGCTGGGGAGGAGAAATCAGAGTAAATAAGTGTTCTTTCCACTGATGTGATTTAACTTTACAAGGTTCTGATGAAAAAACAGTCTTTATGGGTTGATAAGGTGGGCAGAACTAGCATCTTATCTTTATTTTTCATGGGAAAAAGCTTTTATTTTTTTTTAATGTTTAGGGAAATTAAGCTTCTAATTTGGCAGATAATAATAAAGGATGAAGTTTGTGGAGTAGATAGTGATATAGGAAATGGAGTAAAAAAACATGACTTGAGAATTGTGTGAAACAAGTAACCTATCCAGTCAAGGCATTATTGATTGATTGAGACAAAAGGATTCCCTCAAAACAACTCAACTCCAACAAGCCTCTGTGGAAGAAGGTTTATGTCTGTTTGGTGGTGTGAATTGGGTGGTTTTGTTGTCAGGTTCAGTTTTGATGGATTAGTGTGGAGCAAATTAAAAGAGTTAGTAAACAACATTGGTCTTATCATCCATCTTTACAAAAGACTGATTTGAAGGTGTGATTTCACCACCCTTGCAACTTTTGTTAAAATTTGGTGGTTCAACATTAGCAAATTGTGGCTAAAAAAATGTTTCCATGCTTTGATAGGGGGCGAAATACCCAGTGCAGAAAAATTATCTATATATATAGATGTTCTTGATGTTTGCTTCAGCCAATAGTTGAGTTTTGGGAGTGGTTTATGATAGCAGGAATTTCTCTGTTCCTTTATATTCAAGTGATTTTGGTTATTGGTTTGCTAGAGTTCATTTGAGTATTATTTCTTTTGATTAGTTCACTACATACAGTATATAACTATAAACATTGTTCTATATATTCTTCTTTTCGATATTCTAACTTTCAGGCATAGCCATGAATTCTAAAGGTTTTTCAATTTTCTTTGACAACAGTCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATGGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACGGTAAATATGTCCTCGAGTGTTAACTATTAGTACCTGTTGCTTTACGTTTCATTTATAGTAGTCTTAATTTATTTATTCATTTCTTTCAACTATCTGGTGTATAATGGACTCAAATTCTTCCAAATATACACATATCTCTTGTCATGCATCTTCAGCTTGTTATATAATAAATTTATATAGTTCCCATTTTCCCGGTAAATGGTCATAAAGTGTTCTCATAAACATTATGGAGATACAGAAACTGAACATAGAAATTCATAGGAGAAACCATGGAACCAAAGAAAGGTCCACATTTAAGCTGTCTGATCTCTCCATATCTCTACTTCAGTGGTGTGTGAAGAAAACAGTATGTGAAAGGGCTGAGACACACGAGCATCAGGAAAAGTAGGCCATTTGTTTTTCTAGAGTCAAATTGAGCTTCATTTTGATTTTTGACATGAATTAAACCGAGCATCAGTACGAGAGTCAAATTGAGTAATCTTCATTTTGATATTTGACATGAATTAATCTGTTTTCTGAAATAAAATATATATGTAATATTTTTGGAAATGTCTAGTGTTATAGATGTTCAAAATCAGCACTAGAAGGTGCCACAATTACATAAAAAGTCGGAAAAAATGAAAAAAAAAAAAGATAAAAAAGAAAAAATGAAACTTGCTGGCTATCTGTACAAAAGATTTGATGAACTGTAACTGGGTTACACTATCATCTATCCATTTCTGTTTACACCAAAAAGATATCCACAAAATGCAATCTGACTTGATCTTCAAGACTGAGTTCTTTTGTCTTTATAAACATCTTTGTTTCTCTCTTTCCAAGCACACCACCATATGACTTCTGGTACTGTGTTCCATTCTGTCTTGATCTGCTTTGAAAGACCTTTCCTATGCTGAGATAGTACCTAGCATTACCCATTTGATTCCCAGAAATTTCAAGAGAAACTGCAACAACTGTGTGCTGATAGCAATGTAGAAATAAATGGTCAACAGACTCTTCTCTTTCTTCAGACATCTGTAAACTATTGAACTCCCCTTCTTTGAAGATTGTCTTGGGTTAAGCAAGTCTTCCTAGCCACCAACCATACAAAACATTTCGTTTCCATTGGTGCTATAGAGTTCCAAACTTGTTTCCAGAAACCAAAATGTTGCTAATAGGACTCCCTCGTGAGCAAAATTATTACATGCCCTTACAGTAAAGATGTCCTTGCTGTGTTCCTTTACAGGTAATATATTTTAACCAAATACATAAGAACCTTTAAACATAGATTTCATAATTGAATAAAACTGATTTGGGAAATTGTGGTCTGACAAATTTCATCTTGCAAAAAGTGAATGGGTCAGAACAAGACCCCAATGCAAAGGCTGCTGTAATGAGAGCCCAGATATCAGTCTATCACCATAACAAAAATTCATTATGGTCAAATCTTCTGACTAAAATATAATAATTTATCTCAGAAGTAACTAGTGCTTAAATACCCACAAGCACTTTAGTCTGGGATTTCAGTATCCAGTTGCTGAAGTGTTGGACACATTGACAGCCTTGTTACCCGTATAATAGGTCATTGATGGACTCCTTCAATCTATAGATGACTGTGTCGTTTCATGCTTTATCTTGTACGTTCCCATTGATTACCATTTGTTTCTAGCTGCTTTTGTTGAACTTAATTTGTGCTTGATTTTTTTGCTCAAGAAAAAGGATATGCACAAGTAGAGTAAAACAAAAGCCAACCCCAACTAGCTTGAGATTTAGGCATAGTTATTGTTGTTGAGTGCAACATAAACAGCTAGAAAGAAATAGATAATTCACGTTGTATAACAGTATAACTCAGATATTATTACTTTATTAGTTCACATAATATAGGGCTGGCTGACACTAGGATATGCGCGCTCCTATCCCCTGAAAGTTTTACACTTTAGTTTACTATGCCATACATGTGCCTGCATGCTGAAAGTTAACAATTTGATTTTTGATGTCTCTGCTGTCCTATCAGGTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATGGTGAGATTCACTACTTTGGTGCTCCAAGTTTACTACTCATTATAGTCTTGCTGCAATTTTTTGTTACTCTGGAAATGATGCAATGTGTAGCTTATTTTAAAAGCAATCTTTTGCTATACCTGAGAGCTAGTTACTAAGATTCCTTTACAGCAGGGAGAGTACCCTGGTACCTTCTTGTATAATACATATATTTTACAGCATGACATGGTTCCCATAGATTGTCTAATATTTTGCGTGTTCATTTCATGTCTTCAGAAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAGGTAATCTACTTGCATCTTGTTTTTGATGATAAACCTGTTATTACATACCTAAATCTGTTAGTTTGGAATGTGTTAAGTCATGTTAATATGTTTGCTTAGGTCCTATGCTTTGTTCGAGTATTTTAGCCCTGTTAGATAATCTTATGCCACGAGATAACTAGAGAATGTCTTGTACTTGTCATTCTTTTTTGGGGGTATAATGTGGATTGAGAAGATTATAAATGGAGAAACATGGTCTATAAAAATCTACAGCCAACCACAATTTTGAAACTGAGGTGGTTGTAGTAGTAGTTCCTGTATATGCTTATTGGTAGATTCCTCCCCCCTCCCACTCCTCCTCTTTTTTTTTTTTGGGTTATGGATGGTAAGGGGAGTGTACTGGTGAAATCAAGTCGCTAAAATTCATGTGCAATCTGTAAAATAGACACACCACCTTCATCAGGCCATTTCACCGCACTACTCTAGTCGTCTGTAGGCAGAGTTCACAATTGATTGTAAAAGAATATGGTCTCTTGATGGTTGTGAGTTTTTTTCAAGATTCATGTGCTTAGTTGGAAATTGGAGAAAACTAAAAGAGACATGAACAGCAACTTACCAAATGCAGAGTGCTTATTTGCTCATGAAGTAAGGCTATTGTTTTATGTAACTGAATATTAATTTTCCATCTTGTTTTCAGGTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTCGTTATCGTAGCATAAAGCTGTCCGTTGGACTAAATTACACCTGTTCATTGTATAGCCTTTGCACAATCTAGTGTACTTGTCAATTTTGCAGTAACACAAGTTCCCAATCAAAGGCTAATTGGCCAAAAACATCAGGGTTGGCAGTCGAAATAGGTTT</genome_strand>
        <mrna_strand>GGAGAGAGAGAAAAGCGCGCGTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG...........................................................................................................................................................................................TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG.........................................................................................................................................................................................................................................................................................CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG...............................................................................................................................................................................................................................................................AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTCTTTATCGTAGCATAAAGCTGTCCGTTGGACTAAATTACACCTGTTCATTGTATAGCCTTTGCACAATCTAGTGTACTTATCAATTTTGCAGTAACACAAGTTCCCAATCAAAGGCTAATTGGCCAAAAACATCAGGGTTGGCAGTCGAAATAGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595048" ref_strand="+" ref_description="SGN-U595048 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gctaaactatccttatcctattcgaaataaaaatatggtctccatgtctgtcctcattctagtgtcttatcctagatgtctctctctccttgctaaactgtgcagaatgcaaactaatttgcaaatctgattcacattattcatgatagttcctatcaactcctgatttcatcctcactatgtctgaataaatggtgatcatgctaatgatttggtatatgaccttcttgaaaagcaacagccacctgttactgattctgcaaaccttgataccacggttttggaatcggtgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatcttttcacctagtgtggagcctgttagtggtgcgcacagtgagtctgatataccaagtgatggagcaaacaatgatttttatgtaccccaattggagactgaagatagtgataacaacagaaattcgtgtgaacatcatacgtgcaatgtttcatatttctacatctctgatatgattgtttcttgtttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="50934" stop="54516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51232" g_stop="51379" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.791"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187">
            <donor d_prob="0.999" d_score="0.84"/>
            <acceptor a_prob="0.923" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51567" g_stop="51694" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="277" r_length="128" r_score="0.906"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53685" g_stop="53808" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="401" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54090" g_stop="54216" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="528" r_length="127" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U595048" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595048" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51232" e_stop="51379"/>
          <exon e_start="51567" e_stop="51694"/>
          <exon e_start="53685" e_stop="53808"/>
          <exon e_start="54090" e_stop="54216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGAT-GGTAGGTTTTGTTCTATGTTATGGCTTTTCAGAATAAGAACTTTTTCGTTGTTATTGTGATGGTGTGAGATTGATGCTTTTCTCATCACCCACAAGTTTTACAATGTAACTCTCTGCTCTATGCTGACATTGCCATTTCTTTGTACTGCGCATTCTGGTTCAATCATCAGTTGCTTTAATTCTTGCAGTTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACGGTAAATATGTCCTCGAGTGTTAACTATTAGTACCTGTTGCTTTACGTTTCATTTATAGTAGTCTTAATTTATTTATTCATTTCTTTCAACTATCTGGTGTATAATGGACTCAAATTCTTCCAAATATACACATATCTCTTGTCATGCATCTTCAGCTTGTTATATAATAAATTTATATAGTTCCCATTTTCCCGGTAAATGGTCATAAAGTGTTCTCATAAACATTATGGAGATACAGAAACTGAACATAGAAATTCATAGGAGAAACCATGGAACCAAAGAAAGGTCCACATTTAAGCTGTCTGATCTCTCCATATCTCTACTTCAGTGGTGTGTGAAGAAAACAGTATGTGAAAGGGCTGAGACACACGAGCATCAGGAAAAGTAGGCCATTTGTTTTTCTAGAGTCAAATTGAGCTTCATTTTGATTTTTGACATGAATTAAACCGAGCATCAGTACGAGAGTCAAATTGAGTAATCTTCATTTTGATATTTGACATGAATTAATCTGTTTTCTGAAATAAAATATATATGTAATATTTTTGGAAATGTCTAGTGTTATAGATGTTCAAAATCAGCACTAGAAGGTGCCACAATTACATAAAAAGTCGGAAAAAATGAAAAAAAAAAAAGATAAAAAAGAAAAAATGAAACTTGCTGGCTATCTGTACAAAAGATTTGATGAACTGTAACTGGGTTACACTATCATCTATCCATTTCTGTTTACACCAAAAAGATATCCACAAAATGCAATCTGACTTGATCTTCAAGACTGAGTTCTTTTGTCTTTATAAACATCTTTGTTTCTCTCTTTCCAAGCACACCACCATATGACTTCTGGTACTGTGTTCCATTCTGTCTTGATCTGCTTTGAAAGACCTTTCCTATGCTGAGATAGTACCTAGCATTACCCATTTGATTCCCAGAAATTTCAAGAGAAACTGCAACAACTGTGTGCTGATAGCAATGTAGAAATAAATGGTCAACAGACTCTTCTCTTTCTTCAGACATCTGTAAACTATTGAACTCCCCTTCTTTGAAGATTGTCTTGGGTTAAGCAAGTCTTCCTAGCCACCAACCATACAAAACATTTCGTTTCCATTGGTGCTATAGAGTTCCAAACTTGTTTCCAGAAACCAAAATGTTGCTAATAGGACTCCCTCGTGAGCAAAATTATTACATGCCCTTACAGTAAAGATGTCCTTGCTGTGTTCCTTTACAGGTAATATATTTTAACCAAATACATAAGAACCTTTAAACATAGATTTCATAATTGAATAAAACTGATTTGGGAAATTGTGGTCTGACAAATTTCATCTTGCAAAAAGTGAATGGGTCAGAACAAGACCCCAATGCAAAGGCTGCTGTAATGAGAGCCCAGATATCAGTCTATCACCATAACAAAAATTCATTATGGTCAAATCTTCTGACTAAAATATAATAATTTATCTCAGAAGTAACTAGTGCTTAAATACCCACAAGCACTTTAGTCTGGGATTTCAGTATCCAGTTGCTGAAGTGTTGGACACATTGACAGCCTTGTTACCCGTATAATAGGTCATTGATGGACTCCTTCAATCTATAGATGACTGTGTCGTTTCATGCTTTATCTTGTACGTTCCCATTGATTACCATTTGTTTCTAGCTGCTTTTGTTGAACTTAATTTGTGCTTGATTTTTTTGCTCAAGAAAAAGGATATGCACAAGTAGAGTAAAACAAAAGCCAACCCCAACTAGCTTGAGATTTAGGCATAGTTATTGTTGTTGAGTGCAACATAAACAGCTAGAAAGAAATAGATAATTCACGTTGTATAACAGTATAACTCAGATATTATTACTTTATTAGTTCACATAATATAGGGCTGGCTGACACTAGGATATGCGCGCTCCTATCCCCTGAAAGTTTTACACTTTAGTTTACTATGCCATACATGTGCCTGCATGCTGAAAGTTAACAATTTGATTTTTGATGTCTCTGCTGTCCTATCAGGTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGC</genome_strand>
        <mrna_strand>GCTAAACTATCCTTATCCTATTCGAAATAAAAATATGGTCTCCATGTCTGTCCTCATTCTAGTGTCTTATCCTAGATGTCTCTCTCTCCTTGCTAAACTGTGCAGAATGCAAACTAATTTGCAAATCTGATTCACATTATTCATGATAG...........................................................................................................................................................................................TTCCTATCAACTCCTGATTTCATCCTCACTATGTCTGAATAAATGGTGATCATGCTAATGATTTGGTATATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG.........................................................................................................................................................................................................................................................................................CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAACAACAGAAATTCGTGTGAACATCATACGTGCAATGTTTCATATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595046" ref_strand="+" ref_description="SGN-U595046 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157358995|emb|CAO66897.1| (e_value=9e-31) unnamed; ">
      <seq>tctgcaaatcttgataccacggttttggagtcggtgcaggagtctacagtagtgatctgcaaaccaagttcagagacaatcttttcacctagtgtggagcctgttagtgcaaacaatgatttttatgtaccccaattggagactgaagatagtgatagcagcagaagttcgtgtgaacatcagacgtgcaatgtttcagatttctacatctctgatatgattgtgtcttgtttggctgttgagggtgaaaccatctatgataacagtttgactgacaggttcttggctgattacaagtgtgaagaaccaaatatttttaataatgttgatgaggaatacttgctgttgcctttacttgaagacactgcagcagctagctataggcaagtgtgcagaacgtctactgaagaaactgctgttcagtctgatgattcgagcttatacatggcaattcaccagcttagatcatctgaacaatctgatgctttcacatatttagaatctgatcaagcagaatgctttgacccacatatatttataagaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="53373" stop="54827"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53685" g_stop="53772" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="109" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53773" i_stop="54089" i_length="317">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54090" g_stop="54527" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="547" r_length="438" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U595046" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53685" e_stop="53772"/>
          <exon e_start="54090" e_stop="54527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAGGTATACCTCCATTTTTGTTGGATTCTTTTGTTGATTATGAAATTCATATTCAGATTTTGTTTCTTCTCTTTGTCCTGAAAAAGTGCTTAGGCAAACCACAACCCATCCTTAAATTTGCTGTATTTCTTCTGTTCTTGAAAAGGATGTTGCCACACAGCCAAAAGCCCCCCGGGTCGTAGATGATAAGAGCTGGGGAGCACACCTCTCTCTCTCTCTCTGTTCTAGTTCTCGTGAAAAAGATCATTATTACATAAACTTATCGTATTTTTGGTTGCTTACAGCAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATT</genome_strand>
        <mrna_strand>GTTTTGGAGTCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTG.............................................................................................................................................................................................................................................................................................................................CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTGTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTACTTGAAGACACTGCAGCAGCTAGCTATAGGCAAGTGTGCAGAACGTCTACTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTTATAAGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595044" ref_strand="+" ref_description="SGN-U595044 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157358995|emb|CAO66897.1| (e_value=1e-62) unnamed; (*ATH) AT5G46410.1 (e_value=6e-54) | Symbol: None | NLI interacting factor (NIF) family protein, contains Pfam profile PF03031: NLI interacting factor | chr5:18842330-18846448 FORWARD | Aliases: MPL12.21, MPL12_21; (*SWP) sp|Q54GB2|CTSL2_DICDI (e_value=6e-35) CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum GN=ctdspl2; ">
      <seq>gcaaacttcacattttctgttttgttcagcatgaaagaacacattgtcgatgtggaacagcggcctcgggtccggacattcttggagagagttgcagagatgttagacattgtaatttttactgctaggcagagcatatatgcgaagcaattgatggatattctggatccagatggaaagattatgtcaaggggagcatatcgtgaatcatgcatcttctctgatggaagttatacaaaggatttaacggtattaggtgttgatctggcaaaaggagtcattgtagataattccccacaagttttcagattgcaagtgaataatgggattcctattaagagtcggtttgatgatccttcagactctgcactaatttctttacttccattcctagagacactggctgatgctgatgatgtccaacctattattgctaaaaaaatcgggaacaaggaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="54605" stop="56338"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54905" g_stop="55204" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55881" g_stop="56038" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="458" r_length="158" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U595044" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54905" e_stop="55204"/>
          <exon e_start="55881" e_stop="56038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAGGTAATCTACTTGCATCTTGTTTTTGATGATAAACCTGTTATTACATACCTAAATCTGTTAGTTTGGAATGTGTTAAGTCATGTTAATATGTTTGCTTAGGTCCTATGCTTTGTTCGAGTATTTTAGCCCTGTTAGATAATCTTATGCCACGAGATAACTAGAGAATGTCTTGTACTTGTCATTCTTTTTTGGGGGTATAATGTGGATTGAGAAGATTATAAATGGAGAAACATGGTCTATAAAAATCTACAGCCAACCACAATTTTGAAACTGAGGTGGTTGTAGTAGTAGTTCCTGTATATGCTTATTGGTAGATTCCTCCCCCCTCCCACTCCTCCTCTTTTTTTTTTTTGGGTTATGGATGGTAAGGGGAGTGTACTGGTGAAATCAAGTCGCTAAAATTCATGTGCAATCTGTAAAATAGACACACCACCTTCATCAGGCCATTTCACCGCACTACTCTAGTCGTCTGTAGGCAGAGTTCACAATTGATTGTAAAAGAATATGGTCTCTTGATGGTTGTGAGTTTTTTTCAAGATTCATGTGCTTAGTTGGAAATTGGAGAAAACTAAAAGAGACATGAACAGCAACTTACCAAATGCAGAGTGCTTATTTGCTCATGAAGTAAGGCTATTGTTTTATGTAACTGAATATTAATTTTCCATCTTGTTTTCAGGTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATA</genome_strand>
        <mrna_strand>GCAAACTTCACATTTTCTGTTTTGTTCAGCATGAAAGAACACATTGTCGATGTGGAACAGCGGCCTCGGGTCCGGACATTCTTGGAGAGAGTTGCAGAGATGTTAGACATTGTAATTTTTACTGCTAGGCAGAGCATATATGCGAAGCAATTGATGGATATTCTGGATCCAGATGGAAAGATTATGTCAAGGGGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGGAGTCATTGTAGATAATTCCCCACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTCGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCAACCTATTATTGCTAAAAAAATCGGGAACAAGGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585204" ref_strand="+" ref_description="SGN-U585204 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>catcattgtgggggtcagtgtgtagttccgataatttgtttgttaggtatataattgcaggatgttccttggtatacctgcttcccatccttctagtattctcgcccattcaaatcatgatattattgactttcttttcgatcaaaatgatttcataaccacacacaaaaaaaagcctcttccctttgaacatgatgcttgatattgacatgagggttctatttcccggtattgaataggttaggcaattaaattctgcaagaatggatgttttctaggtggtgataaagtggtaggggaagctgcaaacgctagataatgtctatggtgatgtagaggttgggactagactaccaattggatgtttcccagtcgaacccactgtgcgaatactgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="57981" stop="58977"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58281" g_stop="58677" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U585204" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58281" e_stop="58677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCATTGTGGGGGTCAGTGTGTAGTTCCGATAATTTGTTTGTTAGGTATATAATTGCAGGATGTTCCTTGGTATACCTGCTTCCCATCCTTCTAGTATTCTCGCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGTTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTCTAGGTGGTGATAAGGTGGTAGGGGAAGCTGCAAACGCTAGATAATGTCTATGGTGATGTAGAGGTTGGGACTAGACTACCAATTGGATGTTTCCCAGTCGAACCCTCTGTGCGGATACTGAG</genome_strand>
        <mrna_strand>CATCATTGTGGGGGTCAGTGTGTAGTTCCGATAATTTGTTTGTTAGGTATATAATTGCAGGATGTTCCTTGGTATACCTGCTTCCCATCCTTCTAGTATTCTCGCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGGTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTCTAGGTGGTGATAAAGTGGTAGGGGAAGCTGCAAACGCTAGATAATGTCTATGGTGATGTAGAGGTTGGGACTAGACTACCAATTGGATGTTTCCCAGTCGAACCCACTGTGCGAATACTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572839" ref_strand="+" ref_description="SGN-U572839 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157351882|emb|CAO42846.1| (e_value=1e-48) unnamed; (*ATH) AT3G57040.1 (e_value=4e-45)  Symbol: None | two-component responsive regulator / response reactor 4 (RR4), identical to responce reactor4 GI:3273202 from (Arabidopsis thaliana); contains Pfam profile: PF00072 response regulator receiver domain | chr3:21120593-21122411 FORWARD |... ; (*SWP) sp|O80366|ARR9_ARATH (e_value=3e-44) Two-component response regulator ARR9 OS=Arabidopsis thaliana GN=ARR9; ">
      <seq>gaaaatccttaagattctgatttgatatcttcattcgtatctctctttctcttctgtcaaatattttccgtatcttctcgaaatcaacatcacatcccccatatatatatatataattcacttcacaaactcacaaattcataaaaacaaatacaaattcgtaaattttctttttcttcttacaatcaaacaatggatactcaatttcatgttttagctgttgatgacagtattattgatagaaaactcattgaaagacttctcaaaacttcatcttatcaagttactgttgttgattctggaagtaaagctttggagttgcttgaagtaagagaaacgggagtgaatttgataattacagattatagtatgccggaaatgactggttatgatttattgaggaaagttaaaggatcatcttatttgaaggatattccagttataattatgtcatcggaaaatgttccatcaaggattaatagatgtttagaagaaggagctgaagagttttttctgaagccagttcaacaatcagatgttaacagaattaagcctcatttaatgagggagaaacctaattctctaaagagaaaagctatggttgaatgcatttcacctgacagaaccagaaaatacagcagcaacaacaacaacagtttatgtagcatctttttgcagaacatttgtgagtgaaggggaaattgtttcaaacaaacatattcagtgtaatctctcgctcgcaattgagatctcagatctgagatctaagaaaggctgggcagatccagatcgaggtgtttatatcaaacagatgaatttaaaagaattatcaaagaattatagaaaaaaatttgttgaagatggatggaagtgactggattaacactttgtttatatcaatcaagtagatctgatctgatttgggactaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="88620" stop="90229"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88920" g_stop="89196" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89280" g_stop="89929" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="932" r_length="649" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U572839" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>927</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88920" e_stop="89196"/>
          <exon e_start="89280" e_stop="89929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATA-A---TTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAA--AAGAAATTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAGGTAATTAAGTGAATTCAAAATTCTTTTTTCAACGAAAATCATCTGTTTTTTTTTTTCTAATATGTTTATTTTTTAATTAACAGTTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGACAGAACCAGAAAATACAGCAGCAACAACAACAACAGTTTATGTAGCATCTTTTTGCAGAACATTTGTGAGTGAAGGGGAAATTGTTTCAGAGAAACATATTCAGTGTAATCTCTCGCTCGCAATTGAGATCTCAGATCTGAGATCTAAGAAGGGCTGGGCAGATCCAGATCGAGGTGTTTATATCAAACAGACGAATTTAAAAGAATTATCGAAGAATTATAGAAAAAAATTTGTTGAAGATGGATGGGAAGTGACTGGATTAACACTTTGTTTATATCAATCAAGCAGATCTGATCTGATTTGGGACTAATT</genome_strand>
        <mrna_strand>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCGTAAATTTTCTTTTTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG...................................................................................TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGACAGAACCAGAAAATACAGCAGCAACAACAACAACAGTTTATGTAGCATCTTTTTGCAGAACATTTGTGAGTGAAGGGGAAATTGTTTCAAACAAACATATTCAGTGTAATCTCTCGCTCGCAATTGAGATCTCAGATCTGAGATCTAAGAAAGGCTGGGCAGATCCAGATCGAGGTGTTTATATCAAACAGATGAATTTAAAAGAATTATCAAAGAATTATAGAAAAAAATTTGTTGAAGATGGAT-GGAAGTGACTGGATTAACACTTTGTTTATATCAATCAAGTAGATCTGATCTGATTTGGGACTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572045" ref_strand="+" ref_description="SGN-U572045 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|157358997|emb|CAO66899.1| (e_value=3e-56) unnamed; (*ATH) AT1G29390.1 (e_value=8e-55)  Symbol: None | stress-responsive protein, putative, similar to cold acclimation WCOR413-like protein gamma form (Hordeum vulgare) gi:18449100:gb:AAL69988; similar to stress-regulated protein SAP1 (Xerophyta viscosa) gi:21360378:gb:AAM47505 | chr1:10... ; ">
      <seq>gattgttgtcgctcttcgttcgacaaatggcacactatttcttgtacgtatgaatcaacccttcactttatactgtcacttctcactctccttcttcaccattattgtctttaactctgatttctcaggcgacccatctctgatttccactttctttatcttcattcgccggcgtataagttaaacagtagaggaattttaaaacaaagatatagaatgatgtccctttctctttctctttcttatcctatacatcgttttgcttcctacaataaacaactatgcgctttgagatctcctcaatctcatcacactaggatttctcagcacaaattgcagcaaagctctagttttcttggatataaccctctcagagtttcaattgatgtaagtggagagatgaatatgaagagacgtggaggagtggtttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtggttctcatgcttgcgaagggcactgctattcacaagtcttttcttgttcctttatttgctttacaagctcctactgcagttgtctcgtggatccagggtgaatatggcatttggtcagcatttttggcacttcttgttcgtctcttcttctcctttcctggtgaacttgaattgccatttatagcattattgatggtaattgtggctccttatcaagttgcaaatctaagggggacaaaggaaggtgtcattctttccttggctatagcagcttatctgggtttccagcatttcacacgtgctggcagcttgcagaaggcgtttgatcaaggttcaattattgccaccctagccatcatttgtattcttgctgtgccatgcttgctcttgatttgatgttaaactacagcgatttctcaaaggagtcctgtaaattatttgagtcatttgagggttggagatcacacaaataaatatctttcttttaatccctcgtgtaaatttctagctgtttatctagtcaagtttgtgggacaaattaaggtgaatatatttatgcaggaataaataggataaacaagctttcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="91908" stop="96789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92207" g_stop="92580" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92722" g_stop="92835" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="488" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95202" g_stop="95297" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="584" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95390" g_stop="95454" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="649" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="95983" g_stop="96052" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="719" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96130" g_stop="96489" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="720" r_stop="1079" r_length="360" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U572045" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1079</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92207" e_stop="92580"/>
          <exon e_start="92722" e_stop="92835"/>
          <exon e_start="95202" e_stop="95297"/>
          <exon e_start="95390" e_stop="95454"/>
          <exon e_start="95983" e_stop="96052"/>
          <exon e_start="96130" e_stop="96489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTTGTACGTATGAATCAACCCTTCACTTTATACTGTCACTTCTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAGGTTTGTTGTTTGATTGATTTGGATATATGAACCTCATTTCAAATTTGGTCTATCAAAATCCCATTTTTGCACGTGTTTTGGGGCGTATTTCCCTAATTTTTTTATCTTATCCTCATGGGGTTTTGATTGTTTCTTTTACAGAGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATTTGTATACTGCAATCTGACAGTCAAATGGTTATTTTTAGGGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCAGTAAGTTTATTAGCATCTGTTAAGTAGCTTGTGCTTACTTCATTAAGCTGAATGTTTTGCAGTACAGCAAACTGACGAGAAATAACTTTCAGGGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTGGTTGGTTCCTTTATCATGTCTATGGTTTAAACCTCAAATCTTGAAATTGACAACCTTGTCTTTTGCTTCTGTATTTTGTATGTTGTTGGATAGCATTATGTATTTTGTATGTTGTTGGATAGCATTATCCACCCAATATTCCCTCGGGAAGCAGGCTATTAAATTGTACCCAATATTTTCCTGGTTCTATTTTAAGGTGAAAATCTCAGCCCATTTCTGGGTAGGAAGTAAGAGAATATGCCCAACTTTTGTATGTTTACAACCCTTAGTGAGTTTAACATTCTAAAGTCATAATAGGAAGCAGAATATGTATTCATGCTGCTTAGCAGAAGATTGTGAATGGACATTGAAACTTGAAAGTTTGACCCTGTTCTATGTTATCAAAAGATGATAAGGAGATCATTTTCTAAGGTTGTTGTCAAGATTTTAGCTACTCATTTTCTTTGGACGCTGTTATGTTTGCTACTACATTCAATCATTTAGATGATTGTCTTTGAAATATCTGACTGCGGTCTTGATCATTTGTAGGTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAGGTTGGTATATCCTTCTCTATAAATGTCACTTGGTCTGATAGAGTAGAGTTATATCTGGTTAGTATTGTTCTTGGCAGGGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATGTATTTATGCAGGAATAAATAGGATAAACAAGCTTTCATTT</genome_strand>
        <mrna_strand>GATTGTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTTGTACGTATGAATCAACCCTTCACTTTATACTGTCACTTCTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAG.............................................................................................................................................AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA............................................................................................GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG.............................................................................GGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATATATTTATGCAGGAATAAATAGGATAAACAAGCTTTCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572044" ref_strand="+" ref_description="SGN-U572044 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>caggtttgttctgctgctgctcttactcctagaaatctacagtgggtctgtactatttcctctgtgatgtggccaaaccatctcatttgactttctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgttagaatttagaagcatcaaccaggagagagcattggcccttgccattgacacattagctttgtgtgcttcacactctatcgttaaggcttgagttaacccaacactgtacagatagaaaagataaaaagagagggacgtgtgcagaagtctttctttatagattgtacacttgttcctgtcacgtaacattagtcaataatatttttagagatttactgtttgctttctcttttttctcgagtatgactgcacattaatttctttggtacaagtgtattgaatcttagaagattcaaagtcagtgccccttgtttttatagtcttgtataatttccggcgaataaactatcttttttttcttttaaagtaaacctttggtctgcatgctgtgccatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="92473" stop="95463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92771" g_stop="92835" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755">
            <donor d_prob="0.201" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94591" g_stop="95163" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="640" r_length="575" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U572044" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92771" e_stop="92835"/>
          <exon e_start="94591" e_stop="95163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGTGTAAGTCTCCCTTACTCATTCGCGCGCTTACAGGAGTTGGTGCTAAGTTTGCTGGTAAAATGGGACATCTAAAGAATTGATTTTTCATTTTCATTTTGACCATGTGAAATTAGAAGTGGTATAAATCTAGTATTGACTCTCAATAACGTCGTATGAATCTTTTTTAGTACTTTTTTTTTTTTGGAATATGATGGGAGTGTCTTCGGTGAAAGGCAAAATTTGGGAAGCAAAGTTGAGATAGTTTGGGCTCGTGATGAATAGATGCAGGGATAGCAAGTGCGGATGTGTGAGCGGTTGTCTGGATTGATCTGTGAGAGGTAGAAGTAGACCAACAAAGTATTGGAGAGAGATGATTAGATACGACATGACATAGTTGGAGTTCACCGAGGACATGATCTTAGATAGTAAGGTGTGGACGACACGGATTAGGGTAGAATGGTAGTAGGTAGGAGTGTATGGACTTATTGTCCATACTACTCGTCGTAGTATTACTCCTGTTTCTTGTTCTTCAATTTCTGTTATTATATGTTGTTCCGTGTAGTTTGATTATAACATTATTTTGTTGTAGTATTGTTCTGCTACAACCTGTGTTATATTACTGTCTGTTGTTCCTTTTATTTCCATTACTTCTTTTTTTTCTAGACTGTTTTTATCTTGACACCGGGTCTATTGGAAACAATCGCTCTACCTCTGAGGTAGAGATTAGGTCTGGTTACGCTCTACCCTCCACTAAAATTTGTGTGACTACACTAGGTATGTTGTTGTTGAGACGTTGAGTGGAACTCTAAGTTCACTTAGGAAAATACCTTATTAGAGTTCCAGCACCAAGGAGAACCTTGTAGACAAAATAAATATACAAATTTTAACCCATATTTTAAAGTTGTAGGGAGCATATGAAGTCCACCAAAGCATTAACATTATTCAAACTACACCAAACATCAAGATGCATAATGTGATTAACAAGAGAAACTCCCTCAAAACACCTCCAGTTCCTTTCCCTCAATAAGGGCCAATATAATCCATTATGGAATGTAACAAACCTTTCGCAGAGAGTTCTGTGGCTCTCTTCCTGTTAACTACAATATGTATCTCTAAAGAATTCGGCATTACCATTGATCCCAGGTAAATTTACAAAACATATTCTGTATGTCAGTACTCATCTCTGAGTGTAGGAAAAGGAGATTCTGTCCTACATATCCTTCTCTCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATC-TTTTTTTCTTTTAAAGTAAACC-TTGTTCTGCATGCTGTGCCATGATT</genome_strand>
        <mrna_strand>CAGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACGTGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTTATAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTTCTTTTAAAGTAAACCTTTGGTCTGCATGCTGTGCCATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588648" ref_strand="+" ref_description="SGN-U588648 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gcacagttattacctatttttcaaatccgtttccctcttctcaggtgtgatacatgcttcatttgtgctgtacaaaatacttctagaggaaccttatgttttcaaattagttgtcaagactctttcctctggtttatatatagtaacacccgtatagaataaaccccttttgtgtgtcacttactcttccttttcaattatcctgttttcttagttcagttgtcagcaacaagttagcctctccaatttccagtcttgactctcctattgatgttatctccacctattattttctagacaataggtaattgtgcattagatcgtgatttgaaactggataagttttgacatacctgtaattcctaccaaaatttgatcttcacaccatttcccaattcaacttaaacatgttgcctctggattcttctcactggtttctaatatgcactgatgatcatgtagataatatttccatccatatgattttagttctatttggtctcctttagccccttcaataatctcatgatgacacatgttgacctgtgcaggatgtggccaaaccatctcatttgactntctcccattttatcctcgagttcaacttggacttccaaagtttccagattacttgatgattaagggtcacttacaggctaatgtacaagcttgatcgtaaagagctaaggtgtataaggaaaacagtttgctggtagcaccactcgttagaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="93741" stop="95072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94040" g_stop="94772" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="733" r_length="733" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U588648" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94040" e_stop="94772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATT</genome_strand>
        <mrna_strand>GCACAGTTATTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTTTGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTNTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563122" ref_strand="+" ref_description="SGN-U563122 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|19774137|gb|AAL99045.1|AF487527_1 (e_value=3e-18) D1; (*ATH) AT5G46390.2 (e_value=4e-17)  Symbol: None | peptidase S41 family protein, similar to C-terminal peptidase of the D1 protein (Hordeum vulgare subsp vulgare) GI:1296805; contains Pfam profiles PF03572: Peptidase family S41B, PF00595: PDZ domain (Also known as DHR or GLGF) | chr5:... ; ">
      <seq>ggtcgggcgtggttgtaacaattgggaagtatgtcacaccaaatcacatggatattaatggcaatggagttgaaccagatttcaggaattttcctgcttggaatgaagtcaacaatcgtttgtcaaagtgccacaaacaacaagatggataaggtaagggtttctattttcttcttcttgtttctttattaacttgtggtttcttatcatggctctttctgtcacatacagctcgctcgttttcctttcagtgtcattccgattcatcatcatgacagatgaataacttggggtagtccttcggtcgtgcaacactcagtttgatatgatattaacagatgttaaccttcacagtcgcttagcttcacccttagcctgagcatcaccaggaagaaacaaagtacgtaatgcatactcttctattgcctagacatcctcttgaagaacaaatcagatcgatatcagcaactttaatctatcaagatgcagaactggccattggatgataaaattagtaggccagaaccagctgagttgtgtcattgtatttatcttactgatagcaggtgcctatggatgatagtagcacaagttgtggacataaataactagcaatttacctgatacaaccaacagttcatattgtacacacattttgagtaaatgtaaatcaatttgcgcctcattttgatgttccctaataagatgtacttctgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="101791" stop="100392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101491" g_stop="101396" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101395" i_stop="101316" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101315" g_stop="100692" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="720" r_length="624" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-U563122" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101491" e_stop="101396"/>
          <exon e_start="101315" e_stop="100692"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTGGTAAGATGCTCCTATTCACATCATTACATGTGTCAACAGCATTCTGTTTCTCTGAATATAAAACTATATAATATTTGCAGCTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGCCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATTTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTTTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATG</genome_strand>
        <mrna_strand>GGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTG................................................................................CTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGTCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATCTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTGTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563089" ref_strand="+" ref_description="SGN-U563089 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|19774137|gb|AAL99045.1|AF487527_1 (e_value=9e-52) D1; (*ATH) AT5G46390.2 (e_value=2e-33)  Symbol: None | peptidase S41 family protein, similar to C-terminal peptidase of the D1 protein (Hordeum vulgare subsp vulgare) GI:1296805; contains Pfam profiles PF03572: Peptidase family S41B, PF00595: PDZ domain (Also known as DHR or GLGF) | chr5:... ; ">
      <seq>tatggagaacgagggggaggaggtgtatgagaaaaacactgaagtatccaaagtggcgagcaatcaaaacattgcggaagaagcttggcagattgtcaatgacagctttcttaacaccagcgatcgccgatcttggtctcctaaatcgtggcttcaaaagaaagatgacatcttaagttcatcaattcagacaaggtcaaaaacacatgatatcatcaagcgtatgttggctagcttgggtgacccctatacacggtatctttctcctgaacagatggctagatatcatatgactgggattggagtttacctcacggatgttccacatggcaatggaggttcaaaactgaaggttttagggctcctattggatggccctgcccataatgccggtgtacgacagggagatgaactgatatctgtgaatggggtggatgtgcacggtaaatcttactttgaagcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="109135" stop="105329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108839" g_stop="108686" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108685" i_stop="107279" i_length="1407">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="0.933" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107278" g_stop="107159" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="274" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107158" i_stop="106473" i_length="686">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.078" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106472" g_stop="106344" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="403" r_length="129" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106343" i_stop="105692" i_length="652">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105691" g_stop="105629" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="466" r_length="63" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-U563089" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108839" e_stop="108686"/>
          <exon e_start="107278" e_stop="107159"/>
          <exon e_start="106472" e_stop="106344"/>
          <exon e_start="105691" e_stop="105629"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGAGAGAACGAGGGGGAGGAGGTGTATGAGAAAGACACTGAAGTATCCAAAGTGGTGAGCAATGAAAACATTGTGGAAGAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCAGCGATCGTCGTTCTTGGTCTCCTGAATCGTGGCTTGTAAGATGTTGTTTTTCTCTTAAAAAACAAGAAAATTTAACTTTTTTGAGCTAAAGGGGTTCTTTTGCATATCAATTCTTGATAGCTATCTCATTGATTGTTTGGTATTTTGCTACCAGAGAATATGCTCTATTTATTTCATTCTAATTGTAGCTTCTTTTTTTCTTTTTAGCTCTAGGGGTTCTCTTGCATATCAATTATTGTTTGGTATTTTGCTGAAAATATGCACTATTTCGTTCTAAGTGTAGAATCTTTTTTTTACCTTTTAGCTGAAGGGTTCTCTTGCATATCAATTATTGAGAGGTATCTCATATCTGGTTGATTGTTTCGTATTCTGCTGCCAGAGAATATGCTCTATTTCATTCTAAATATGGAACTATTCCTTCTTTTAGCTTAAGGGGTATTGAATTTGATGGTTTGCTTAGATCATCTACTTAGCTTGTAAAAATACATACTTGGAGCATATTTAGTATACTATTACTAGGAGAATATATTTAATTTCATTCTATATGTATATTGGAATTCCTTTTATGGATTTAAATCTCTACTGGAAAATTCTCATCCAACATGGCAAAAGAGATGCTCTTAGCAATTTGGTGGGGGCTGGAGGTTAAGATCCATATTGAAATGTTCCCTGAAAATGCTGATTAGCTCTGTTGGTGGGGCAGGAATAAACGTATATTTCGTAAAATAACAGGAATTCTTTTTGGATTGTGTTAGCTACTTATCTTTACTGTAGGGTCATTGTAATGGATGCCTCGAATGAAATCAGCTACTTCATCAAAAATATTCGTATCATCATTAAAGCCATATGATTTTCTGGATTTGGAGGAATAACAAAAATTATTTCTAAGAACATTGAAGTAGAAAATGTCAAACTAATTGTTGGAGGCATGGACTTAACGTGATGTGTAGTTTAACAAGGAAAACATCATGCATTGTTGGAATTGAGATTAATTAGTAGTCGGATTCTTGAAAATTGATGACTGAATATAATGTCAAATATTTTATAATACTGAAGAGATTTTAGTTTCTTTCTACTGTAGATAGTGCACTTAACTAGGATATGTAGTAATAGTGGCGGAATATAAGTCTTTCACCTAACTGCTCAGCAAGTCTGATGCAGTAAAGCGCATGGTGAAAAAAATTCTAATTTTGTTGCTCAGCATGTCTAATGTGGATAAAAATGTGATAAATGAACCAGTGGAAGCATTTTGCTAGCACTACATCATGTCTTTTCGAAAAGATCTGAGCCTTTTATGTCTCTGCTGACATCTTTTTTCTCCCTGGGTTCTTGCCTTCTCTTCATCCTACCTAGATCATTGCTCTCCCTATCATATTCTTTTGTATTGATATCAACTTAGAAGTATTCATGACTAAATATTTCGTTTTCTATGTTATTACCAGCAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGGTCAAAAGCACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTTTCTTTCTCCTGAACAGGTAATAAGTCCTCTTTACATCAATATTTACGTCTGTATTGTTGAATTTGGTATGTATGTTTAAATTAGCATACAATTTTTAGAGGAAGACAGGATGTCTACCACATGGGAATACAAATCTTTTTTGGTTCGGTTCGTTACATAGGACTAGAAATTTTATTTCCGAGTTTAAACATTGCAAAGAGTGAAGCAATTTGGACGTATTCTTTCGTTTATAGGTTGATATAAATGTACTAGGGAAGTTTGGAAGAGGTTCGACGCTTCTTCGTTAGCATTAGTGATTTGAAGTTCCTTTACTTCTTTACATTATGTTCTCAATTTCTCTTTTTATGATTCCAATATATGTATGTATTATTAACCGTCCTGAATCTGTACGGATCTTTCATCTCATCCTCCTGCATTATCATCTTTCCATTTAATTGGATGAAACACAAATTGATGAAGCCATATGTTGTAGAGACGATAGTACTTCTCTACTTTCAGTTAAGAATGGGTATTGTATCGTACGTCATGAGATATATGATTTCTATTGATTCCTTCTTTTTTCAGTGTATCTTGCATTTCCTTAATTCAAATAAACGTCTTACTTACCAACTTTTTCCTTAATTCAAATAAACGTCTTACTTACCAACTTTCCAGTGTTCTTGTTCCATGAAATGTACTGCTTGTCATTGAAAGTTCTCCAAGATGGCTAGATATGATATGACTGGGATTGGAGTTAACCTCAGGGATGTTCCAGATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGGATGGCCCTGCCCATAATGCCGGTGTACGACAGGTATGTCATTTACAGTCATTTACTAACAAAAGCACTTCCCTTATTTATTTTGCTTAGCTTTATGCAGTGGTTCTTTTCTTTTCCCTGTTGATGAAATGCTTAATATCTCGGTTATTGTAGTCATGATTACTTGATAATGCCAACAGTAGGGAATTTGTCTTTGTTATTTATGAATACGATTGAAAAAGGAGAGATAAGCTTTAAACTGGCAAACTAATGGCCTCTGATTCAATATAATTTTCCCTCAAGGTGTCCAGTCCTTCTCACCACACATACTTGGGGCCTTGCCTGTTAGTTTCGCAGGTGTCTTGTACTGCTTGATGGCTTATGATATATTTTAAGTGATGGAATTTTTCCATAGCTAAATATGTAGACCGCATGAAGATGTGTTATTTTGAAATGCTTACTTGAGACGAGGGTTTATCGGAAACAACCTCTCTACCTTCACAGGGTACGGATTCATTGGGTATGTTGTTGTTGCATGAACATGTGCTATTTTGGCTGCAATTGAGTATAACATTAGCACATACTACTTCTTTACATTTTCTCTCCCCACTGAAAGTATCTGGGTTCACTTCAGTTTTCCCTATTCTAGTTTGATTTACCATTCAGTGAAAAATTAACATGTATCTTTCATGTGAACTCGTGGCAGGGAGATGAACTGATATCTGTGAATGGGGTGGATGTGCTGGGTAAATCTTCCTTTGAAGCATCT</genome_strand>
        <mrna_strand>TATGGAGAACGAGGGGGAGGAGGTGTATGAGAAAAACACTGAAGTATCCAAAGTGGCGAGCAATCAAAACATTGCGGAAGAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCAGCGATCGCCGATCTTGGTCTCCTAAATCGTGGCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGGTCAAAAACACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTATCTTTCTCCTGAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCTAGATATCATATGACTGGGATTGGAGTTTACCTCACGGATGTTCCACATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGGATGGCCCTGCCCATAATGCCGGTGTACGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATGAACTGATATCTGTGAATGGGGTGGATGTGCACGGTAAATCTTACTTTGAAGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U565380" ref_strand="+" ref_description="SGN-U565380 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|157359000|emb|CAO66902.1| (e_value=0) unnamed; (*ATH) AT1G29370.1 (e_value=2e-155) | Symbol: None | kinase-related, similar to putative protein kinase (GI:11125348) (Homo sapiens); similar to Paired box protein Pax-8 (Swiss-Prot:P47240) (Canis familiaris) | chr1:10277876-10283184 REVERSE | Aliases: F15D2.28, F15D2_28; ">
      <seq>gggaagaagaagagaagcagcagcagcaaaagcaaaaaccccttcattctgtgcgttatttttcataataaaactgagataaatatacagagttgaggagacccaaaaaaccctaaactataacagatctgaaacaagaaaatattttgtgggtctttcttgtttttttcctctctttttttttagagaaaaagagttgtcttcttcaaagatgagtagcagaaacaatggtggagttggggtacaatcgatacccgcagggtcaagaaagatggtacaaagcttaaaggagatagttaactgtcctgaacctgagatctatgctatgctcaaagaatgtaatatggaccccaatgaagctgtcaataggcttcttactcaagatacttttcatgaggtgaagagcaaacgtgaaaagagaaaagagagtaaggatacgactgaatctaggccacgtggtgcaattagcaactcaggccgtggtagcaggggaggtgcagaacgatatgttgggcgcggtgggtcagccgagtctaccaagcttattcctggatacagaaaagataatggatcaaagacgagtaacctgacttctactctaggagtttccggaataagcaggagggccacaacaatcagtgatattgctgcaaatgaaagtaaaaagtcagcacctgcagcagttgatggtgtttcatcagtctcacagcatgagacttcttctggatatcaacctacttggggtggggtgcccggtcaagtttccatggctgatattgtgaagatgggtaggccacagagcaaagtgccaagtgcacctagtgtatctcaccacaatgtcaatgccgagcaaaaccatattcaggggctcccttctggtgcatcacatcaaaatactcagtggtctgatgatcatactaccaaaatttctgaggtacaccgagagccacaacatctttcaactgatgaggaatggcctctaattgagccgccatcagttgctagtcagacatctatctcagagcctcctgctgattcggagctgcatcctgatccaactaacatgtcatatgacagaattaatcatcaaaatgagattgatgaagttcaggggacagataactgcacgattgaaaatcttggtagtccttcaagcagaaggttgcaggaggataatgctggaggtgcatctatttatgagaatgacctctacggatatcagaaccagaatcatacctttgaccatcaacaagctgaggatgttaacaactctgtttcatcagtttctgcaaacttgcaacagttaaatgtacaagatgatggaggggtgccacctgagggagatggtccttctgttgtaataccagaccatcttcaagttcaaactgcagactgctcacacctgagctttggtagctttggctctggtattggtggctccttttctgggcctttggcatctgctccagtgactagtactttggaagatgcacctaaggaagtggatggttcatcagttgggcacttgggatccagagcttcagaatactatggtgatgagtctctcagacatgcatctgagagtaacttataccatagaactaatgcaagttctgtaaattacgattcacctgcttcacaaccagaacctttgaaatcagaaacaaatgaacaaggaaatcaatattcgtatccctcttctgctgctggctacacatatgaaagtgcacaacaattaactgcagcatttagtcagccacagacaagttcccagatgcaaaatctcactcctttctctaatgtaatggctttcacaaattcattgcctagcaccttgttggctgctattgctcatgctggtcgtgaaactgatctttcatacttacctttttctgcaacacaagcaatggctatgaaatatggcagctctgtttcttcaattggtggttcaacaatttccatgcctgagtctttgaagggtgctggttttccatcagcacagcctacacagcagccactttctggaactagtgtcaccactggacctactgtgccgcaacatcttgctgtgcatccatataaccaaccacctctgggaccatttgctaacatgataggttatccctttttgcctcagagttatacatatatgccatctgcattccagcaaccatttgctggtaacagtaattatcatcagtcactggcggcggtgcttcctcaatataagaacagtgtgtcagtcagcagcttacctcagccagccagtgttgcttctgcgtatggtggttttggaaatacagcaagtatccctggtaacttcccaatgaatccccctgctgctccctctggtactaacttgagttacgatgatgtgttgagctctcagtacaaggataccaatcatttaatgtctcttcagcagagcgagaactcagctatgtggcatggacccggttcaaggacaatgtcagctgttcctgctaacacatattatggttttcaaggtcaaaaccagcaaagtagtggatttaggcaagctcaacagccgctgcaaaatcatggatccttggggtacccaaatttctaccattctcaggcggggatctcattagaacatcaacaacaaaatccgagggatgggtcattgggtggtggatctcaaggccagccaaagcagtttcaacagctatggcaaagtggcggctactaatctcttactgcctccttcttttttggagtcttgtaatgagtgtgaaagtggctatagggtgttgctttggaagcaactagaatgcacaatcaattggatgcttacctgtgcctcaaggttgtactttacatgtttgtcatcagtcaaatgtaacgtaggatgtgagctaacgtcgtgctagtggacttgtcttctgtttcatcaactctttgttacacagttaaccccatggtttctttattaatagtgagaagtgttctgtctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="+" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="111433" stop="120379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111732" g_stop="112114" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112115" i_stop="112974" i_length="860">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112975" g_stop="113018" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="427" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113019" i_stop="113505" i_length="487">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113506" g_stop="113605" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="527" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113606" i_stop="113717" i_length="112">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.484" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113718" g_stop="113829" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="639" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="113830" i_stop="114418" i_length="589">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="114419" g_stop="115032" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="640" r_stop="1253" r_length="614" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="115033" i_stop="116098" i_length="1066">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="116099" g_stop="116381" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1254" r_stop="1536" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="116382" i_stop="117068" i_length="687">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="117069" g_stop="117339" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1537" r_stop="1807" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="117340" i_stop="117751" i_length="412">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="117752" g_stop="117913" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1808" r_stop="1969" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="117914" i_stop="118802" i_length="889">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="118803" g_stop="119258" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1970" r_stop="2425" r_length="456" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="119259" i_stop="119525" i_length="267">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.741" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="119526" g_stop="120079" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="2426" r_stop="2979" r_length="554" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="+" ref_id="SGN-U565380" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2979</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111732" e_stop="112114"/>
          <exon e_start="112975" e_stop="113018"/>
          <exon e_start="113506" e_stop="113605"/>
          <exon e_start="113718" e_stop="113829"/>
          <exon e_start="114419" e_stop="115032"/>
          <exon e_start="116099" e_stop="116381"/>
          <exon e_start="117069" e_stop="117339"/>
          <exon e_start="117752" e_stop="117913"/>
          <exon e_start="118803" e_stop="119258"/>
          <exon e_start="119526" e_stop="120079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGAAGAAGAGAAGCAGCAGCAGCAAAAGCAAAAACCCCTTCATTCTGTGCGTTATTTTTCATAATAAAACTGAGATAAATATACAGAGTTGAGGAGACCCAAAAAACCCTAAACTATAACAGATCTGAAACAAGAAAATATTTTGTGGGTCTTTCTTGTTTTTTTCCTCTCTTTTTTTTTAGAGAAAAAGAGTTGTCTTCTTCAAAGATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAGATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTCAAAGAATGTAATATGGACCCCAATGAAGCTGTCAATAGGCTTCTTACTCAAGGTCTACCATAAACCCTAAATCTTTAATTTCCTTTTTTTTTTGGTGGGTTTCGGGTTTTAGGGTTTTTTATGTTTTGGGAAAAAATTGAATAAAGGTACTGTTTTTATAGATAGAAACAAGAAACAAAAGAAAATCTGTAATAATACTTCTTTTCTTGATATTGGGTGTTAGAAGCTGTTTTTTGTAAGGAGAAGAATGAGAAAAGATTTGATTTTTATGCTATATAGTTAGTTCAAGATTTATTGTAAGGTATCTTAATGGATTGAGCATGCAGATATTTCATTGATTGTGACTTTAGAAAATGAAGAGAAGACAAAACTAGGGTCTTTAGGGATTTTGTTAATCAGATTACTAGGATTCTCTTTTTAATGCACTTTGTGTTAGTTCTTGTATTAGATTTCTTAGGTTTACAATTACTCTTCTTTTACTATCTCTGGCCACTGATTTTCATCTACATGTTAATGGGACTTCCATTTCTTCCTTTGTGTGCGAGTTGTCTTATTTGGTAGCCTTTTCTTGGACTTTTGAATTAATGTTGTTGGGATTTCGGTGGTACAAGTACTGAATTCCATGTTAGTTATCCGTTTTCCAGAAATGCACGCTTTACTTTGAAGAAGCATGAGTTTGCTTTTCGTTTCTCTCTTAAAGCCTCAAGAACTTATATTTTGTGCTTTTCACTTTTAGAACGTTAGCTACTGCAGTCATGTTTGCCTTCCTCTGTGCTCTTCTATGTTGTACTTGTACTTGAAGGTTATAGTATTTTTAGTTCTTGATAGAATGGTCTGCCATTCCATTGGATGGTGACCTTAGTTTGTGATTAATTTTGATCACCTTCTAATTATAGTTTATTGATTGGCTAGATACTTTTCATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAGGTTCGTAATTTTTACTTAAAGCGGGATTTTAGAGACAAATTGGTTATGGCGATCTGATTTTAACTTTCTCGTTCTTAATACTGCCTGTTTCTGTTGTAATTTACTATATGATACGAGATTACGGAAAATTAGTCTACTCAGATCTCTTATTACCTTGGCTCGATGATTAACTTCTGATGAAATTCTGAATATTTCTACGGTGAAAACAAAAGTATAAAGTGAAAGATTCTCTGTTTGGAAATTTGTTCAGTAGAGGTTCTTTTTAGTAGGCACCCCATTATTTTGATATTCCAATTTCTCTTTCTGTTTATACTGATAAATTATGGTGCCTTATTCTTTTCAAATAATATGGTGTTTCCTCTTGATATGTTTTACGTCTTATTGGTTAATGCATGATCTAGCAGAATATTACAAGGTGTTACTATGTTACTTTCTTAAATGGCTTGTTCATTTTTTCATTCTTCACTCATAATTATCTTTGGTTCAGAGTAAGGATACGACTGAATCTAGGCCACGTGGTGCAATTAGCAACTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTTGGGCGCGGTGGGTCAGGTATGTACATGATAATGTACACTCTTTTCAAACATAATCATGTCTTAAGTTTTGCATAGTTCATCGTGTCATCTCATGAGGGTATCGTCTTGTTTCTATATACCCTTTCCAGCCGAGTCTACCAAGCTTATTCCTGGATACAGAAAAGATAATGGATCAAAGACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAATAAGCAGGAGGGCCACAACAATCAGGTTAGTTGTTTCAAGTTTCAACTTCATAAATAGTTTAGGTTCTCTCAAAAATACATCAGTTGCACATCAGTTGCCTGTAGATGTTTGTCTTTCTTTTTTCCGTAGAGTATTCTGTAGTACCACAGTATGTTTCTTTTTATTGAAGTGTCTTTGGCAGTAATATAATTAACTTAGTAATTACAATCAGTAATCCCTGTATTGGATTAAGCTAAGACTTTTCATGCACTTCAATAATCACGCAATGTGAGCTATTCTCAAAATGCATGTGACAAAGCACAATAAGGGAAAGGTTTTTTTTTTCCAAATCCTAGTTTGACTGTTTGATCCTTAGCGCAAGCGCTAAGTGAGCAAGCTACCACTCTGTGGGGTAAAAACCGTGGAAAATAAAGAATGTCAAGTAGAAAGGAACAAGGTCTTACGGCTACTAATAAGGGGGTTGGGGTTTGACAATAAAAGACTGGGGCTTGTTTAGCCGCCTAGGTAGTAAGAAAAACTCTGAGTTTGACATTAATAGCCATAGTGAGTTCATCTTTGAGGGGCTTTTGGGAGATGCATAACAGTGTTCTCAATGCTGTGATATGTGTAACAGTGATATTGCTGCAAATGAAAGTAAAAAGTCAGCACCTGCAGCAGTTGATGGTGTTTCATCAGTCTCACAGCATGAGACTTCTTCTGGATATCAACCTACTTGGGGTGGGGTGCCCGGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCGAGCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAGGTTAGTATATTACAGTTTTTATTTGGTAATGATATGCATTTCATTGGTGAGAATATGTAGTATTTGTTGTCAAGTAGCTTGTGTAATGTTTTTTTTTGACATGGCACTGTTAATTTTTGTTTTTTTCCACGAGTTCCAGGCATTGGCAAGTCTTTAGTTCCAGTAAACTAAAGATTCTCTCTATCCCCATTCTACAATAAGTAATCATTACATGTTTCATAGAGCAACTATACTGGCACTTAGCTTTTTAGGAATGCAGTTTTAGAACCGAAGGTTTTATATCATACCACCAGTTTAGCTTAAATAAGCTGGACATTTAGTTATGGCTCTTGAATACATGGGTGTTCAATATGCGGAGTGGGACATATAGCAGCAGTGGAGGGCAACAGGGAATATCATCTTAACTGCATCCAAAGCTCTTTCTTACTGTATTTGGAGCTTCAATGTGATTTTACTGCTTTTCATTTTGTTTTATCTTGTCACTTTGATGATAATGTAGCATAGAAAACACTCCTCACAGCTTTTTGTTTGTCTTAGATTTTTTTAATAGGAATTTAAACAATCATTTTTTCTGCAATTTGTTTATTTTGGTATTATCAATGTTTTGTTAACTGTGGCTTAATACATTACTTGGTTGATTTACTGGGGCATCTGATAGATGTATAAAGAGGGAAGCCTTGAGTGCTGACTTTCTGCTCATACTCGTAGGTTGTGTCAACATGAGGTTATTGCAGATTAAGAGGTTCTTCTCATGAATTTTCAAATCTACCATGTGAAGTTGAAGCTTGATGTTCTTGCACATGGCTCCCATATTTGAAAGAGAAGAAAACCCTAACAAATATCAGGCCACGTAGAGACTACTCTGTTTTTGGGGGTGGTGGTGATGTTCATGGGAATTGAGATGTGCTAGTTAGGAGATAAATCAACCTGCTTTTCATGTCATTATTTAGTGGAAAAGCACTGTAGTTTTACTGCATAATCAAATTGTTAACATATGGAGTTCCGTTACTTATAAACTTTTGGAATGTTTATTTTTGTGTAATAATCCTATTTCATTGTCTTGCAGCTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAGGTAAGGCCTCCTTCTAACCTGTGGATTTTCTTCAACTCATTGATATTTTTTTTATCTAATTATATCAACATATAGTGTAGAAACTATGTTAACATTAACATGCCAAACTCTACTGGCGTTTCCCCTACCCGAGATATGTGGGCAATATAATGCAGAAATTATGTTATGTTAACATGCCAAAACTCTACTGGCATTTTCCCTACCTAGATTTGGGGGTAATTTGTTTTGCCTCTACTTTTTTTACTAAATAACTACAAATATCCTTGCATTTAGTATGTTTGTAGCAGGTTTGTTCTAAATGTTCATCATATTAGTCAATTAAATTAATCTTTACTATTCTAACATCCTAAACAGTTGGTATCTGTATGAATCCTCTGTGCCACCACTGTATTCAGATTCATTTCATTCCAGTCAAATAATTTATCATATAAGACAGGCGTGAAGCTATTCTCTGCCCTTTCCTACCAAAAAGTGATTTAAGACTAAGTTAGGACTTCTCTGAAGCTCACTAAACAGTACATTTTTAAACTTTTATCCTAACATTCCATGTTTTAAGTAAAAAATATCTTACAGGATAACGTTAGTCATCTTATATTCAGTTTCAAAAAAAAAACATTAGTCATCTTATTGAGGGTGTTCAACCTTGCAAGTATTCCTCTTAATTGTTAGTGCATCTTTATATTGCAGAGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATGGTAAGTTTCTTTCCTTGTGAAGGATGCAAATAGTTTCCCTGCTCTTCATTGGATGTTTGCGTGTGTGCATTTGCATAGCTCAAGTCTGAAGGTAATTGTACAGAGTATATTGGAGTGAATTCTACTTCTCCAAGGGGTTGTTTGGTAGAGTGCATAAGAATAATGTTAAATCCAGTGCATTAGTGATGCTTGTAAGTTATATCAGCAATGCATGAATTAGTTATGCTTGCATTAATTATACATAGATTATTTTTATGCATTGTTTGGTTTGATGCATTAAAATAGCATGCATTGCATAAAGAAATTTATTTACATAGATAGCCTCATCTAATATAAGTTACCATTCATTTGTTAGAGATCCTAAGACCAGAATTTTCTACATTGAGGTGCTCACTGCTATTGTTTTGAGCAGGCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTAATGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAGGTAGTGCTATCCTGATGAAGCTAATTATTTCTTCATTGTGATTGTCAATTTCCTCATGTGCACTTGGTGTATTGCTCATGACCTGCTGGTTGTCAGTATTTTCATGTAATATAATAAGCAAAACATGTTCCTTTTTGTATTCTTTTTGAAGTAATTTTAATGATTCTAGTTGTTTATTTGTGCATGATGAAAAGTTTTACATAATGGATGTAGTTGCATCTTACACGTTTGGTATCTTTCAACATTGGGGAAGAAAGCTTCTGCTATTGAAAACTAAAAATTTGAATATTCTCTCTTGATGTCTATCCAAATGTTTTGAGGGCAGCAACTTTTTTTATTGTGTAAAATCTCTATAGTGGAAAGATGTATACAGAGAGAATAGTTACTCGTCATGGATTTCCACAGTAATTCAAGGCGCACTTGATGTATTTCTGTGTTACATTTTGGAGGCTCTTGCTTGTTAAGAGGAGGAAAGGAAAACCACCCTTTAAATTTAGAAAAAGGAGGCTGAAGTTGTGTGTGTAAATTCCTTATATTATTTTTTGGTTTTCTATGTTAAATAAATGTCAGTACCTTCTGGTTTTTGCATGTAAGATTCCTTTTGGGTTGTTGCAAAAGAAAAGAATGGGCACTCGGTTGTTAATAACCTGAAATTTAAAGATTCACAATAAAAACTGCTAAATTCGGTTGCTATAAGACCTACATAAGATTAATTCCTAAGAGGAGTGTAGGTCGAAAATCAGTTGACGAATGATATAAAAGCTGATGTATAAATCTATTATAGTTTTCCTTTATCATGGAGAAGTGCTGTAAGATGGGACAGATTTTCTATCATCTTCTTTCTTTCTAGAGTTTTTGTGTACATGATTGATTTTTTCTTGACTTGCAGTCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGTTATCCCTTTTTGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCTCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAGGTACCCATTTCATTTGCTTTAACAGCTGTTCAATTCTTTGAAGTCAATAGTATACTGCAAAATTGCTGTTGATTCTACCTTACTACTCTAATATAATAGGTTGATATATTTCTAAATTGGACAAATAGTTTCTATAGCACTGCTTTTTTCTGGTTAATTTCTTGTGCTAGCTGTATTCTATTGTTTGAGCTTTTGCTCATCAATCCATCCTTCCTTTCCTTGAATTGAAGGCAGCTCATGTATATGCTCATTATTCCTTCCTTTCAGAGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCC</genome_strand>
        <mrna_strand>GGGAAGAAGAAGAGAAGCAGCAGCAGCAAAAGCAAAAACCCCTTCATTCTGTGCGTTATTTTTCATAATAAAACTGAGATAAATATACAGAGTTGAGGAGACCCAAAAAACCCTAAACTATAACAGATCTGAAACAAGAAAATATTTTGTGGGTCTTTCTTGTTTTTTTCCTCTCTTTTTTTTTAGAGAAAAAGAGTTGTCTTCTTCAAAGATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAGATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTCAAAGAATGTAATATGGACCCCAATGAAGCTGTCAATAGGCTTCTTACTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTTTCATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAGGATACGACTGAATCTAGGCCACGTGGTGCAATTAGCAACTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTTGGGCGCGGTGGGTCAG................................................................................................................CCGAGTCTACCAAGCTTATTCCTGGATACAGAAAAGATAATGGATCAAAGACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAATAAGCAGGAGGGCCACAACAATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATTGCTGCAAATGAAAGTAAAAAGTCAGCACCTGCAGCAGTTGATGGTGTTTCATCAGTCTCACAGCATGAGACTTCTTCTGGATATCAACCTACTTGGGGTGGGGTGCCCGGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCGAGCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATG............................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTATTGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGTTATCCCTTTTTGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCTCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG...........................................................................................................................................................................................................................................................................AGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572530" ref_strand="+" ref_description="SGN-U572530 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|157359002|emb|CAO66904.1| (e_value=3e-65) unnamed; (*ATH) AT1G60970.1 (e_value=9e-60) | Symbol: None | clathrin adaptor complex small chain family protein, contains Pfam profile: PF01217 clathrin adaptor complex small chain | chr1:22451513-22453124 REVERSE | Aliases: T7P1.11, T7P1_11; (*SWP) sp|Q6Z844|COPZ2_ORYSJ (e_value=1e-60) Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica GN=COPZ2; ">
      <seq>gggggctttacggacccagcaaataggctcttctcctcccttctctacggcgtgcaattctggtgtgtccgtaggtcgtgcgatccgccattttcaacctcaattcaccaacaatggagatctgcccttcaattaagaacattctgcttctagattccgaaggaaagcgtgttgctgtaaactactactcagatgattggccaacaaatgctgcaaaggaagcttttgagaaggccgtgtttgccaagactcaaaagacaaatgctagggcagaagcggagattacaatgtttgataattatattgttgtctacaagtttgctcaagatcttcatttctttgttactgggagtgacaatgaaaatgaaataatccttgccagtgttctccaaggattctttgatgctgttggtattcttcttaggggcaatgtagaaaagaaggaggcacttgaaaatttggaccttattcttttgtgtctggatgaaattgttgatggcggaatcgttcttgaaacggatgctaatgttattgctgggaaagtggcaagcaacagcgttgattctggggcacctttgtcggagcagactataagtcaagcattggcaactgcacgagaacacttggcaagatctcttctcaaatgatttgttgggtctacaaaagaaagggaaaacaggtcttgcaagtactgattttctttccttctgaatgaactaattgatgagcatcagtttacatgtgttttggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="125320" stop="120545"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125022" g_stop="124907" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124906" i_stop="123876" i_length="1031">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123875" g_stop="123716" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="276" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="123715" i_stop="123206" i_length="510">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.777" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123205" g_stop="123058" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="424" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95">
            <donor d_prob="0.872" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122962" g_stop="122885" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="502" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="122884" i_stop="121226" i_length="1659">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121225" g_stop="121141" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="587" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="121140" i_stop="121009" i_length="132">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="121008" g_stop="120847" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="749" r_length="162" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-U572530" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125022" e_stop="124907"/>
          <exon e_start="123875" e_stop="123716"/>
          <exon e_start="123205" e_stop="123058"/>
          <exon e_start="122962" e_stop="122885"/>
          <exon e_start="121225" e_stop="121141"/>
          <exon e_start="121008" e_stop="120847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTGCTTTACGGACCCAGCAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTAGGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATGGTTAGCTCTCACTCTTTCTCTTTACACTTTTGAGTAATTCTCTTCTTTTTTTTTCAACTAAACTTTTTTGCCCAAAACAAGCTCTTTGTTTTTTTATCACTGATCTTGTGTTGTATGGTTGAATTTATCACTGGTAGAAAAAATTATGCATTTTTGGGGTTTTAGTTTTAGTCGAATTGGAATAGTTGGACTAGTGTTTTTTCGTGATCTCTTTGATTGTCGACGTTTTTCTAGAGTTTTGTTTACTTGGAGGTATAATTGGAAGGGTATATGAATCAGATCTAGCATCTGTAAGTATTCAACAATGGGAAGAAAAAAACTTAAGAATTAAACAAAAGGAAGAGGAAACTTTTTTATGTGGGCAAGTAAGATTATTTGCAGTATATACAGCACCAGTTAGTTTTTTTTTTCCTTTAGGAACGCCCTAATTGGGAGAATACCAATGTTTAAGTTGGCCAGCAACCCACACATTTAAGGCTAATTTGGGTTTATTCTTGGTTTCATGTTTTGAAATGAGATGTTGTATTTACCTTGTTAGAATCGGAATTTTTGCTCAAGAATAAGGAAATGTGGTACTTTATAACTAGGGCGGAGATATTTTATAAAATAGTGAGGATTTTCTATCGAGAGAATAAAGGGAAAGGGTAGCTGAGCGAACTTCTGGTTTAAGGTTTAGTTGCTGGTGACATCTATAGCTGTGTGGGCCATTGAAAGGGAAGGCAATATCTTTTGTGTTGTCGCTGTGCTTGATTTGGAGTATGATTTATGTTGCACGTGTGCTTTAACAGAAAACTAAAAGGAGAATATGTAATGGTGGCTGTATCTTGGAATGTTGAGACTATGGATGAACTTGAACTATTGATAGATAGAACCATAAGCAATTCATGGATGACTGTCTCAAATGTGTCAATATATGCTTTTAACCCATTTCTCTGTAAAACGGGAAAAGAAATTTATCCCTTTTTAAAAATCATATATGGATGGATGTGTAGACATATCCTGCTATAATATCTTTCAAATCCTTTTCGCAGGAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAGGTATGATATCTCTTTTACTGTTGATTTATTTATTTATATTTAGTCATGCTCTTTCCCAATATCTCCCTCTCAACATGCAAAGGAAGCAAAGCTCATTCGGATAGTTAGTGATGTTCCATTCTGCACTAGAGTTGTTTGTGATGCCATCTTATGTAGTATACCTTGCCAGTCTCTGCAAACATTGAGTTCTATTAAACTCTGGTGGTATGTATTAAATCAAGAGCCAAAAACAAAGTTTTGCTAATTTACCAAATAGATCAGTGATGAGTAGGCTGATAATAATAATCTTAGAAGACTTGGCTTTGTGTTGTTTGCTTGCATATCCTCTTCTTGAAGTTGGTTGTTGGTGTGAGATCACTTGTTACATCAGAGTTGTCTTTATGCCAGTGACTAAATTGGACCGTTGTGCTACTACCCCCCTCCCCACCCCCTCTTGGCTGATGAAACTAAATTTTGTGATTGGAAAGGCAACCTTCATCTGTCTGAACTCTCTTCTCACTTCTTCTGCAGCGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAGGTTGTTTACAAAAGCAGTCTTTTCCTTTTCAATATGCATCCGTTGATATTTTCGTCTTCATGCACTCATCTTGCTGCAAATGCCTTTTGTTTTAGGGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGGGTAAGAGAATTGTACCATGATCATTTTATTTGTTTCAAATTCTGAACTATAAAATCTTCGTTTAATGTTGCTTATCTTACTGTTTTGCTGCAACTTTTACTCGATCTTTGTACAAATATAGCATGTCAGGAACCTTTATTCTTTTCTTTTATAGTTATAGAGAATTAGAGCTTCAAAAGCTTATCTAACTTTCTGAACCATAGTAAAATTAATATTTGGATTTAATATGCCACAAATAGGGGGAAAATAAAAGGCAATTGTGTAGTTAATAAGACATTTTGTCTTTGCTGGAGACTTATTAAGACAAGACTTCTGATTAACAGAATCATAGGATACTTCTTACACAAAATTCCCCCCCACCTACCACCACCCCAAAAAAGAACAAATAGAGGAAAAACGAGAACATCAATTATCAAGCCTATAGCAGTGACCTCTTCCCTATGGACATTTTTCTTTCACAAGCTATAAAGCTCTCCTCAGCTTAGCTATTAATCTTATGAGTAATATATAGTGATAGTACATCACACTCCTTATTTTGGACAGTCACTGTATTAGCTATCCTTTTTCTATGTTAGTGACTTCATTCTTATGAAAAGTTGCCTCGTGGGATTGGGTTGAGTGACTTTTTCCTTTGACGGTATATGTTCATTCATCTTAGTCAAGTAGTTTTGCTCTCCTGTTACTTTAGACTCTGGGTGTATTTGATATGCCGAACAATGTTTTACATAGAAAATATTTTTTATCGAAAAATAAGCCTTTTACTTAATTACTTTGGTGTTTGGTAAGTAAACAAAATATTTTTTTTGTCTCGAGAGCATTTACATGCAGTTTTGGAAAATACTATGAATATGCAGCATAGGAAAACACTATGGGGTGTAGAAGGATAGTAGGTAGCCGTTTGTTGTAGTACATTCATGAGGGAGAAGCATGGAGCTAATCTCCTCTTCTCGTCTTCTCTTTATTTAGTAGTGTTACCTTGTATTCGTGTAGTTTCTTATTCTTCATCTTTGTTTATCTTGTTATTTTCCTTTCTATCCTTCTTTGATTGCACTTTTTTGAGCAGAGGGCCTTAGAAACTACTCTTTCCCACTAAAGTAGGGGTAAGCTCTAGGTACATCCTACCTCCCCTCCACCCCCCCAAACCCCACTTGTGGAATTACACTGGTCTCTGCTGTTGTATTATGTGGTGTTGTATTATGTGGTGGACTGCTAAGGGAGTGGGTGGGGGTGGAAACCATGGCTTCGGGAGGAGACAATGAGCTTGGAATGTCAAGTATGACACTTGTTCTCTTCTTCCACTAGGGAAGTCATTTTACTGATTTTGAAGGAACTTGTGTTCTTAGAGAAAATGTTCTCCAAAATCATTTTGACCAACCAAACATGGGAAAATTGGAAAACATTCTCTGTACTAAACACACCCTCAATGTCCACTTCTTCGTCCATCCTAATTCCCCACTTCCACTGTAGAGTTCATACGTTTTTTGACATGCCGTGTTTAGTAATTAGTACATATTAGAGTGTTTGACCTTGAGAATTGATGTGGAAAAAAGAGAATGGAAAAGAAAGCGGACTTCCAATCTTGCTCTCAATTTCAGTTATGGGGAACTAAGTGTTTACAATCTTTTGAATATCCTCCATGTCACTTTCTTGGCTCTGTAGAATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAGGTAAATATTGCTCTCTTTCTCAGTTTCTTGATGCTTTGGTCCTTCAAACGGATGGAATAGTTGCTTCATTAATTACCATCCCCGTCCACTTAACTCATTTTTTCACTACACATCCTTTGTGGTTTTCTACAGACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTG</genome_strand>
        <mrna_strand>GGGGGCTTTACGGACCCAGCAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTAGGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAG...............................................................................................GGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAG....................................................................................................................................ACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574265" ref_strand="+" ref_description="SGN-U574265 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147790992|emb|CAN63784.1| (e_value=8e-114) hypothetical; (*ATH) AT1G29790.1 (e_value=3e-105) | Symbol: None | expressed protein | chr1:10429961-10432018 FORWARD | Aliases: F1N18.26, F1N18_26; ">
      <seq>gctgatttgcttcatcagtatatgagctacacaccctttagtctttgcccctcagattcttcagtagctgagtctcttattcttagagggtgtcaccctctacctaggaggcgctgtttttcaagaaccccttctagtatccccgcttctttgcctaaaacccctttttctactatccctgaaaaggccttgttgtggaataattacacttgtaagagcttttcttgtttgtctcagtctaatcccaacttgggatttgatatgaaagttgagcaatcaaaattcttggattttaagtcagatctagatctcccaattccacagtttcttcagctaactaagacctcaaagagtgttattaggctggcactcgatattgggggtggtacaggaacttttgctgcacaaatgaagctgcataatgtgactgttgtgacaacaacaatgaatcttggtgccccttatagtgagactgtggcacttaggggattggtgcctttacatgtacctttgcagcagaggctgccagtgtttgatggggtgctggatcttgtaagatgtggtcatgctgtgaataggtggattccagtgaccatgatggagttcttgctttttgatgttgatagagtgttgagggctggtggatgcctctggttggaacatttctttagtaaaagagcagatcttgagaaggtttttcaacccttgatctggaaattgaactacaagaaggtgaagtggacagtggctaataagaatgatgctagtggtgtgaagaatggggaagtttatttgacagctcttcttcagaagccgctttcgagatgaacatctagtccagataccactgctagatttgaatgatcatttgatgccaaatgctgctatgttgtgtcaagatattctcttcttctcgaggtagagaaatgcgattagtctgcatttggagcgagaatgatccaaacaatagaaagctgtgtgcaccacagaaatacagtttgcagcaaacaacagtagctgctctaatagatagctatttcctttcattcatttgtcagttttggtgtaatctttactgatttcgaaactaaacaatagtagagataacagaactgcaagtttaaaaaagtgattattataaatgtaaagatattgcaggaaagtgaaaaagaacttgctgagttctttgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="129321" stop="125729"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129022" g_stop="128182" g_length="841"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="841" r_length="841" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128181" i_stop="126379" i_length="1803">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126378" g_stop="126029" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="842" r_stop="1193" r_length="352" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-U574265" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1191</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129022" e_stop="128182"/>
          <exon e_start="126378" e_stop="126029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATACCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAGGTAACCTCATAGACTCTCTGAAAATGAGATCATATATTGTTTTAGTGGATGGATTATAAACATTGCTAGTAGTGATAGATCTAAAGTAGTTTAGTACTCCTATTACTTTTGGCTTGGCACTGAACTAATGAAAGCACCAATAGACATAATCAAAATCTCCTCGCGTGACTTTGAGAAGCCAAATTATGTCCAAGTAATGCTTGTTCAAAGTTTTATGTCTTTATTATCTACTGCAAATGTAACACTGTAGTAAATATGCACCTTCACTGGTGCACATTTCATATTTGCTAAAAGAAATTAATGGTTTTTGCTTCACTCTCGGCTCACCCTTTTGTTTTTAATAACAATTGTAGCTTGGGATTGAAAGAGCAGATTTCAAATTTTCCATGTTGTGTAGAGATTTAGTGTCCGTTTGGATTAATTTGTGGCTTTTGGCTTATAAGTCATAAGCCAAAAGCCAATCCAAACAGGCCCTTAGTTGATCCAAAGTAAATAATGCTGTATTCTTCATACCTTCTGAGGCTGCCATGTCCCATAGGTATCCAGCTTTAAAGTTGTTTTAAGATGAGCCTGCTACAGATTTGTTTCTCGATACACTATATTATCCATTAAGTGGAGATCCTTCGTAGTAAAAGCCTTTTTTCAGTAAGAACTGTTACCTCTCTGGTGCATTTCTGATGCATTTAGCCTTAGACGGGGAAACTGGCTACTTGAAGTGGAATAATTCAGGTTTGTGGTATGTTTCCTTCTTGTCAGAGTTCTACACTGTCCAAAGTCCTGCGGTGATATCTTTCAATGTACACTCATGTCATTCCAAGAATCTATCTACTTTCCTCTTGCACTATGCTGTCAAGATAATCCACCTAAATGTGACTCTCAATAAGGATCCCTGTCCTGTCCCTTAACTCCAGCATAAACTTATATCATTTGTTGATCCAATTGCGCTTTTGGTATATAATTTGTAAGGTCCTTTATTCTTTATTCTAGTTTATTGAACTATGCATATAGTGCCAGAACATAAAAATGATCTGCAAAAATGACAACTTCCCTTGACAATGTAATTTTATGTCAACAAGAACCCATGTGGCTTAAACACCATTTTCTGATGTACTGAGGGTTCAAAGTCTATTTTCATCTACAAAATATTTCTAGTGGCGATAAGATTCATCAATTAGCTCCAAAATCTACCCATTACCTCTTTATACATATATTGGTAATTTGTATGCATGTTAGTAGTAACCAATAGGTTTCAGATTCAACTGGATGGTCTTCATTCTCCAAAAACTATTCTTAGATGAAGAGTTTTTGATCTCAGAAGGCTGATAAATGGGTCATGTGCAAAGCACTTGACTTTTTTCATCCAAAAATTAAATCCATGTAGAGATGGATTCCATTTAATTAAACACAGTACCTTCCTGCAATTGGTGTCCTATGAATTATCCAACTCAAAGTGATCATTAAGACCCTTAATGAAGGCCATTCTGAATGATTGTTGACAAATTCCCCATGTATAACTGTCACGTGGTGTTGCGTTTCCCGTCTAGCTTGTATGTCAACTGCATGTGATGCACTTTGTTCGCAAACCTGATTGATAACAGCACAGCCAATATAATTCACATTGATTTGACTGTTATAACACAAATCATTATTTCTAATATTTTGATCGGAAATGATTTGGCGCTCTAAACTGATTTGCTCATTAGATTGATTGAATCCTTCTGAAAGCTGCTCAAGTAGATTATCTTTCTCCATCTTTTTCGAGGTTGTTTTAAAATTTCAGCTTTTGCTGTTGTTATTTTGCAGATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTT--AAAAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</genome_strand>
        <mrna_strand>GCTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAAATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATGCCTCTGGTTGGAACATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAAAAAAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U595397" ref_strand="+" ref_description="SGN-U595397 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147790992|emb|CAN63784.1| (e_value=6e-69) hypothetical; (*ATH) AT1G29790.1 (e_value=9e-57) | Symbol: None | expressed protein | chr1:10429961-10432018 FORWARD | Aliases: F1N18.26, F1N18_26; ">
      <seq>agtagatttagtagtagaagtaacataaagcacaaaactttatgcttttcttgagcttttacactctctaaagtgtatcagcaatcaagaaaattttgcaggagccacaaaaatgggattcacaatgggtctaaatttgcttcttttggtagctatggtggctaccaacattctttctttgtatcatctctcttccaacatccaatccaagccccctgttgctccacctgttcctgaccaccttctgcatcagcttcagactatacgcgccactattaaccacctcacgcgcctccagcctccagctccaccatctggtaaagctaagaaatctacagtaacgatcccttctgatctccttctttacactcatttatcacctattgcttcttcttgtaaagacaatcctgatttgcttcatcagtatatgagctacacaccctttagtctttgcccctcagattcttcagtagctgagtctcttattcttagagggtgtcaccctctacctaggaggcgctgtttttcaagaaccccttctagtatccccgcttctttgcctaaaacccctttttctactatccctgaaaaggccttgttgtgnaataattacacttgtaagagcttttcttgtttgtctcantctaatcccaacttggganttgatatgaaagttgancaatcaagantcttgnattttaagtcananctagatctcccaanttcncagtttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0066C13-jJs3P/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0066C13.2" temp_strand="-" temp_description="C02HBa0066C13.2  AC215374.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0066C13 sequenced_by:kribb upload_account_name:korea">
        <position start="129728" stop="128402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129428" g_stop="128693" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="736" r_length="736" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0066C13.2" gen_strand="-" ref_id="SGN-U595397" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0066C13.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129428" e_stop="128693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGATTTAGTAGTAGAAGTAACATAAAGCACAAAACTTTATGCTTTTCTTGAGCTTTTACACTCTCTAAAGTGTATCAGCAATCAAGAAAATTTTGCAGGAGCCACAAAAATGGGATTCACAATGGGTCTAAATTTGCTTCTTTTGGTAGCTATGGTGGCTACCAACATTCTTTCTTTGTATCATCTCTCTTCCAACATCCAATCCAAGCCCCCTGTTGCTCCACCTGTTCCTGACCACCTTCTGCATCAGCTTCAGACTATACGCGCCACTATTAACCACCTCACGCGCCTCCAGCCTCCAGCTCCACCATCTGGTAAAGCTAAGAAATCTACAGTAACGATCCCTTCTGATCTCCTTCTTTACACTCATTTATCACCTATTGCTTCTTCTTGTAAAGACAATCCTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTT</genome_strand>
        <mrna_strand>AGTAGATTTAGTAGTAGAAGTAACATAAAGCACAAAACTTTATGCTTTTCTTGAGCTTTTACACTCTCTAAAGTGTATCAGCAATCAAGAAAATTTTGCAGGAGCCACAAAAATGGGATTCACAATGGGTCTAAATTTGCTTCTTTTGGTAGCTATGGTGGCTACCAACATTCTTTCTTTGTATCATCTCTCTTCCAACATCCAATCCAAGCCCCCTGTTGCTCCACCTGTTCCTGACCACCTTCTGCATCAGCTTCAGACTATACGCGCCACTATTAACCACCTCACGCGCCTCCAGCCTCCAGCTCCACCATCTGGTAAAGCTAAGAAATCTACAGTAACGATCCCTTCTGATCTCCTTCTTTACACTCATTTATCACCTATTGCTTCTTCTTGTAAAGACAATCCTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGNAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCANTCTAATCCCAACTTGGGANTTGATATGAAAGTTGANCAATCAAGANTCTTGNATTTTAAGTCANANCTAGATCTCCCAANTTCNCAGTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>20</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="15358" PGL_stop="10059"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15358" e_stop="15168"/>
            <exon e_start="13373" e_stop="13237"/>
            <exon e_start="13145" e_stop="13011"/>
            <exon e_start="12597" e_stop="12487"/>
            <exon e_start="12376" e_stop="12110"/>
            <exon e_start="10083" e_stop="10059"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.017" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.584" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15358" e_stop="15168" e_length="191"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.880">
            <gDNA_intron_boundary i_start="15167" i_stop="13374" i_length="1794"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13373" e_stop="13237" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.017" acc_prob="0.922">
            <gDNA_intron_boundary i_start="13236" i_stop="13146" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13145" e_stop="13011" e_length="135"/>
          </exon>
          <intron i_serial="3" don_prob="0.584" acc_prob="0.943">
            <gDNA_intron_boundary i_start="13010" i_stop="12598" i_length="413"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12597" e_stop="12487" e_length="111"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.880">
            <gDNA_intron_boundary i_start="12486" i_stop="12377" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="12376" e_stop="12110" e_length="267"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.996">
            <gDNA_intron_boundary i_start="12109" i_stop="10084" i_length="2026"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10083" e_stop="10059" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15358" stop="15168"/>
              <exon start="13373" stop="13237"/>
              <exon start="13145" stop="13011"/>
              <exon start="12597" stop="12487"/>
              <exon start="12376" stop="12110"/>
              <exon start="10083" stop="10059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563634" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAAACATGCAAGGCTCCTCTGCTCTTTCCTGTTCTTCAAATTCTATCTCTGCTCCAGTTGGTCTTTGTTGTTCTCAAAGATTAACACTTCCTTTTCGAAATCAAAGAATTGGGTTTCTGGAAAATCCATCAAGCTTGAAGATTTTCCATTTTCACCGAAACACTACCCTCCCTTTGCTGAACTGCACTG : CTACGGAAGAGATCGTGGAGGCTAGTGAAACAGAGGGATTATTTGTTGAAACTGGGTACATATATAGTGTTCATGGGCTTCAAGGTGAGGTTCGAGTAAAAGCGACAACTGATTTCCCTGAATTGCGATTTTCCCAG : CCAGGAAGGCGATGGTTGAGGCAGCAAGTTACAGGGAGAGATATGATTCAAGAAATCGAACTAGTGGAGGGAAGAGGTCATCCAGGACAGAAGAGTTGGATACTTAAATTCCACGAGATTAACACAATTGAGCAG : GCCCAAAAACTTGTGGGGTCGGCCTTACTGGTGAAGAATGAAGATAGACCAATCCTGGAGGAAGGTGAATTTTACACCCCTGACCTTGTTGGGATGAAAGTATTTCTAAAG : GAAACTAGAGAACTGGTAGGAACTGTTATTAATGTTTTCAACAGTGGAGCTAGTGATCTCCTACATGTTGAGCTTCTACCGAATCAAAATGCAAGACCACAGTTGGAAGGAAGTGCATCTGGTCCTCTTGTATGGGTCCCTTTCGTTGAAGCAATTGTTCCAAATATTGATTTGAGTAAAAGGGAAATGCTGATTACACCTCCAAAGGGTCTTTTAGAATTGAACATCCGTGCAGATGAGAGGTCCAAGAAAGAGAGGCGACAGCTT : GAATGGAAAGAGAGAAAAAAGTCTC</gDNA_template>
            <first_frame> R  K  H  A  R  L  L  C  S  F  L  F  F  K  F  Y  L  C  S  S  W  S  L  L  F  S  K  I  N  T  S  F  S  K  S  K  N  W  V  S  G  K  S  I  K  L  E  D  F  P  F  S  P  K  H  Y  P  P  F  A  E  L  H  C :   Y  G  R  D  R  G  G  *  *  N  R  G  I  I  C  *  N  W  V  H  I  *  C  S  W  A  S  R  *  G  S  S  K  S  D  N  *  F  P  *  I  A  I  F  P   : A  R  K  A  M  V  E  A  A  S  Y  R  E  R  Y  D  S  R  N  R  T  S  G  G  K  R  S  S  R  T  E  E  L  D  T  *  I  P  R  D  *  H  N  *  A   : G  P  K  T  C  G  V  G  L  T  G  E  E  *  R  *  T  N  P  G  G  R  *  I  L  H  P  *  P  C  W  D  E  S  I  S  K   : G  N  *  R  T  G  R  N  C  Y  *  C  F  Q  Q  W  S  *  *  S  P  T  C  *  A  S  T  E  S  K  C  K  T  T  V  G  R  K  C  I  W  S  S  C  M  G  P  F  R  *  S  N  C  S  K  Y  *  F  E  *  K  G  N  A  D  Y  T  S  K  G  S  F  R  I  E  H  P  C  R  *  E  V  Q  E  R  E  A  T  A   : *  M  E  R  E  K  K  V   </first_frame>
            <second_frame>  E  N  M  Q  G  S  S  A  L  S  C  S  S  N  S  I  S  A  P  V  G  L  C  C  S  Q  R  L  T  L  P  F  R  N  Q  R  I  G  F  L  E  N  P  S  S  L  K  I  F  H  F  H  R  N  T  T  L  P  L  L  N  C  T   : A  T  E  E  I  V  E  A  S  E  T  E  G  L  F  V  E  T  G  Y  I  Y  S  V  H  G  L  Q  G  E  V  R  V  K  A  T  T  D  F  P  E  L  R  F  S  Q  :  P  G  R  R  W  L  R  Q  Q  V  T  G  R  D  M  I  Q  E  I  E  L  V  E  G  R  G  H  P  G  Q  K  S  W  I  L  K  F  H  E  I  N  T  I  E  Q  :  A  Q  K  L  V  G  S  A  L  L  V  K  N  E  D  R  P  I  L  E  E  G  E  F  Y  T  P  D  L  V  G  M  K  V  F  L  K  :  E  T  R  E  L  V  G  T  V  I  N  V  F  N  S  G  A  S  D  L  L  H  V  E  L  L  P  N  Q  N  A  R  P  Q  L  E  G  S  A  S  G  P  L  V  W  V  P  F  V  E  A  I  V  P  N  I  D  L  S  K  R  E  M  L  I  T  P  P  K  G  L  L  E  L  N  I  R  A  D  E  R  S  K  K  E  R  R  Q  L  :  E  W  K  E  R  K  K  S  </second_frame>
            <third_frame>   K  T  C  K  A  P  L  L  F  P  V  L  Q  I  L  S  L  L  Q  L  V  F  V  V  L  K  D  *  H  F  L  F  E  I  K  E  L  G  F  W  K  I  H  Q  A  *  R  F  S  I  F  T  E  T  L  P  S  L  C  *  T  A  L  :  L  R  K  R  S  W  R  L  V  K  Q  R  D  Y  L  L  K  L  G  T  Y  I  V  F  M  G  F  K  V  R  F  E  *  K  R  Q  L  I  S  L  N  C  D  F  P  S :   Q  E  G  D  G  *  G  S  K  L  Q  G  E  I  *  F  K  K  S  N  *  W  R  E  E  V  I  Q  D  R  R  V  G  Y  L  N  S  T  R  L  T  Q  L  S  R :   P  K  N  L  W  G  R  P  Y  W  *  R  M  K  I  D  Q  S  W  R  K  V  N  F  T  P  L  T  L  L  G  *  K  Y  F  *  R :   K  L  E  N  W  *  E  L  L  L  M  F  S  T  V  E  L  V  I  S  Y  M  L  S  F  Y  R  I  K  M  Q  D  H  S  W  K  E  V  H  L  V  L  L  Y  G  S  L  S  L  K  Q  L  F  Q  I  L  I  *  V  K  G  K  C  *  L  H  L  Q  R  V  F  *  N  *  T  S  V  Q  M  R  G  P  R  K  R  G  D  S  L :   N  G  K  R  E  K  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15357" stop="15168"/>
                    <exon start="13373" stop="13237"/>
                    <exon start="13145" stop="13011"/>
                    <exon start="12597" stop="12487"/>
                    <exon start="12376" stop="12110"/>
                    <exon start="10083" stop="10060"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>864</number_coding_nucleotides>
                  <number_encoded_amino_acids>288</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENMQGSSALSCSSNSISAPVGLCCSQRLTLPFRNQRIGFLENPSSLKIFHFHRNTTLPLLNCTATEEIVEASETEGLFVETGYIYSVHGLQGEVRVKATTDFPELRFSQPGRRWLRQQVTGRDMIQEIELVEGRGHPGQKSWILKFHEINTIEQAQKLVGSALLVKNEDRPILEEGEFYTPDLVGMKVFLKETRELVGTVINVFNSGASDLLHVELLPNQNARPQLEGSASGPLVWVPFVEAIVPNIDLSKREMLITPPKGLLELNIRADERSKKERRQLEWKERKKS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="22146" PGL_stop="24799"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22146" e_stop="22167"/>
            <exon e_start="23975" e_stop="24118"/>
            <exon e_start="24219" e_stop="24799"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.753" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.496" acc_prob="0.932" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22146" e_stop="22167" e_length="22"/>
          </exon>
          <intron i_serial="1" don_prob="0.753" acc_prob="0.994">
            <gDNA_intron_boundary i_start="22168" i_stop="23974" i_length="1807"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23975" e_stop="24118" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.496" acc_prob="0.932">
            <gDNA_intron_boundary i_start="24119" i_stop="24218" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="24219" e_stop="24799" e_length="581"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22146" stop="22167"/>
              <exon start="23975" stop="24118"/>
              <exon start="24219" stop="24799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602890" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTATGGAGTTTATGTTCTG : ATATTCTGAAGATGCCAATGATAAATGTATCTAAAGAAAAGGGAAGAACACCATGGGAGATTCGTCCAGGATCTAATTCCGTCCTTATCACTAATGATGCCTCTCTTTTCACAAGCTCAGTGCCTGTTCTTCAACATGAGAAGC : TGAAAGTAAGTGACGGCGACCATGGTCATCAATCCGTTGATGATGCATCACCAAGCTTGACAATTCACCCGGATGTAGAGGTTGATGTGCTGTTGGATGATGGTGAAAATCGTGCAATTGGAAGCTTGCTTCCAGATGATGAGGATGAACTTTTAGCTGGGATAATGGATGGGTTTGACCCTAGTCAGCTTCCCAATCACACAAATGACTTGGAAGAGTATGATTTTTTTGAAAGTATAGGAGGCTTAGAGTTGGAGTTTGATGGTCAGGAACACTTAAACCTGGGTATATCGAGAGTAAGTCTGGCTGATCCAGATAGCAATGGAGCTGCTATTTATGGACTTTCAAATGGTGGGGGTGCGGTTACTGGAGAACATCCACTTGGAGAGCACCCTTCAAGAACATTATTTGTTCGCAACATAAATAGCAATGTTGAGGATGCTGAGCTAAGAACTCTCTTTGAGGTTAGTTGCTTTACACTGGATAACTATGATCTTTGTAATTTCACGTGACCCTCTTTTCCGGTTTTAGTGCTCATTCCTGATGTGTTTCCTGCATATGTATAAATAGTTTTCATGAAC</gDNA_template>
            <first_frame> F  L  W  S  L  C  S   : D  I  L  K  M  P  M  I  N  V  S  K  E  K  G  R  T  P  W  E  I  R  P  G  S  N  S  V  L  I  T  N  D  A  S  L  F  T  S  S  V  P  V  L  Q  H  E  K   : L  K  V  S  D  G  D  H  G  H  Q  S  V  D  D  A  S  P  S  L  T  I  H  P  D  V  E  V  D  V  L  L  D  D  G  E  N  R  A  I  G  S  L  L  P  D  D  E  D  E  L  L  A  G  I  M  D  G  F  D  P  S  Q  L  P  N  H  T  N  D  L  E  E  Y  D  F  F  E  S  I  G  G  L  E  L  E  F  D  G  Q  E  H  L  N  L  G  I  S  R  V  S  L  A  D  P  D  S  N  G  A  A  I  Y  G  L  S  N  G  G  G  A  V  T  G  E  H  P  L  G  E  H  P  S  R  T  L  F  V  R  N  I  N  S  N  V  E  D  A  E  L  R  T  L  F  E  V  S  C  F  T  L  D  N  Y  D  L  C  N  F  T  *  P  S  F  P  V  L  V  L  I  P  D  V  F  P  A  Y  V  *  I  V  F  M  N </first_frame>
            <second_frame>  F  Y  G  V  Y  V  L  :  I  F  *  R  C  Q  *  *  M  Y  L  K  K  R  E  E  H  H  G  R  F  V  Q  D  L  I  P  S  L  S  L  M  M  P  L  F  S  Q  A  Q  C  L  F  F  N  M  R  S  :  *  K  *  V  T  A  T  M  V  I  N  P  L  M  M  H  H  Q  A  *  Q  F  T  R  M  *  R  L  M  C  C  W  M  M  V  K  I  V  Q  L  E  A  C  F  Q  M  M  R  M  N  F  *  L  G  *  W  M  G  L  T  L  V  S  F  P  I  T  Q  M  T  W  K  S  M  I  F  L  K  V  *  E  A  *  S  W  S  L  M  V  R  N  T  *  T  W  V  Y  R  E  *  V  W  L  I  Q  I  A  M  E  L  L  F  M  D  F  Q  M  V  G  V  R  L  L  E  N  I  H  L  E  S  T  L  Q  E  H  Y  L  F  A  T  *  I  A  M  L  R  M  L  S  *  E  L  S  L  R  L  V  A  L  H  W  I  T  M  I  F  V  I  S  R  D  P  L  F  R  F  *  C  S  F  L  M  C  F  L  H  M  Y  K  *  F  S  *   </second_frame>
            <third_frame>   F  M  E  F  M  F  * :   Y  S  E  D  A  N  D  K  C  I  *  R  K  G  K  N  T  M  G  D  S  S  R  I  *  F  R  P  Y  H  *  *  C  L  S  F  H  K  L  S  A  C  S  S  T  *  E  A :   E  S  K  *  R  R  P  W  S  S  I  R  *  *  C  I  T  K  L  D  N  S  P  G  C  R  G  *  C  A  V  G  *  W  *  K  S  C  N  W  K  L  A  S  R  *  *  G  *  T  F  S  W  D  N  G  W  V  *  P  *  S  A  S  Q  S  H  K  *  L  G  R  V  *  F  F  *  K  Y  R  R  L  R  V  G  V  *  W  S  G  T  L  K  P  G  Y  I  E  S  K  S  G  *  S  R  *  Q  W  S  C  Y  L  W  T  F  K  W  W  G  C  G  Y  W  R  T  S  T  W  R  A  P  F  K  N  I  I  C  S  Q  H  K  *  Q  C  *  G  C  *  A  K  N  S  L  *  G  *  L  L  Y  T  G  *  L  *  S  L  *  F  H  V  T  L  F  S  G  F  S  A  H  S  *  C  V  S  C  I  C  I  N  S  F  H  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22146" stop="22167"/>
                    <exon start="23975" stop="24118"/>
                    <exon start="24219" stop="24730"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLWSLCSDILKMPMINVSKEKGRTPWEIRPGSNSVLITNDASLFTSSVPVLQHEKLKVSDGDHGHQSVDDASPSLTIHPDVEVDVLLDDGENRAIGSLLPDDEDELLAGIMDGFDPSQLPNHTNDLEEYDFFESIGGLELEFDGQEHLNLGISRVSLADPDSNGAAIYGLSNGGGAVTGEHPLGEHPSRTLFVRNINSNVEDAELRTLFEVSCFTLDNYDLCNFT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="28659" PGL_stop="29279"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28659" e_stop="29149"/>
            <exon e_start="29236" e_stop="29279"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.996" e_score="0.982"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="28659" e_stop="29149" e_length="491"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.996">
            <gDNA_intron_boundary i_start="29150" i_stop="29235" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29236" e_stop="29279" e_length="44"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28659" stop="29149"/>
              <exon start="29236" stop="29279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603875" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTCCTTGTCAAATCATCAAAAATCTTTCCTCAATTCATCTCAGCACCACCTTCATCATATTGGATCTGCTCCATCTGGTCTTCCCCTTGATAGGCACTTTGGTTTTTACCCAGACTCGTCAATCTTGAGCCCAGGTTTTAGGGGCATGGGTATAGGTACTCGTGATGAAAGTTTGATGGTTAACTATGGTTCTCGTACTACTTTGAATGCTGGTGTTGCTGTTCCAAGGAATATGTCAGACAATGCTTCTCCTAGGTTTGGCATGATCTCTTCCCAAAAACTTAGTCCATTGTTCCTAGGTAATGGTCATTTCCCAGGACATGCAGCTACTAGCTTTGAGGGGCTGACTGAACGCAGTCGCACTCGACGTGTTGAAAATAATAATGGGAACCAGATGGATAACAAGAAGCTCTTTCTACTTGATTTGGATAAGATTAGATGTGGTGAAGATACTCGGACAACTTTGATGATTAAAAATATTCCTAACAA : GTACACCTCCAAGATGCTTTTAGCTGCTATTGACGAACAACATA</gDNA_template>
            <first_frame> F  S  L  S  N  H  Q  K  S  F  L  N  S  S  Q  H  H  L  H  H  I  G  S  A  P  S  G  L  P  L  D  R  H  F  G  F  Y  P  D  S  S  I  L  S  P  G  F  R  G  M  G  I  G  T  R  D  E  S  L  M  V  N  Y  G  S  R  T  T  L  N  A  G  V  A  V  P  R  N  M  S  D  N  A  S  P  R  F  G  M  I  S  S  Q  K  L  S  P  L  F  L  G  N  G  H  F  P  G  H  A  A  T  S  F  E  G  L  T  E  R  S  R  T  R  R  V  E  N  N  N  G  N  Q  M  D  N  K  K  L  F  L  L  D  L  D  K  I  R  C  G  E  D  T  R  T  T  L  M  I  K  N  I  P  N  K :   Y  T  S  K  M  L  L  A  A  I  D  E  Q  H  </first_frame>
            <second_frame>  F  P  C  Q  I  I  K  N  L  S  S  I  H  L  S  T  T  F  I  I  L  D  L  L  H  L  V  F  P  L  I  G  T  L  V  F  T  Q  T  R  Q  S  *  A  Q  V  L  G  A  W  V  *  V  L  V  M  K  V  *  W  L  T  M  V  L  V  L  L  *  M  L  V  L  L  F  Q  G  I  C  Q  T  M  L  L  L  G  L  A  *  S  L  P  K  N  L  V  H  C  S  *  V  M  V  I  S  Q  D  M  Q  L  L  A  L  R  G  *  L  N  A  V  A  L  D  V  L  K  I  I  M  G  T  R  W  I  T  R  S  S  F  Y  L  I  W  I  R  L  D  V  V  K  I  L  G  Q  L  *  *  L  K  I  F  L  T   : S  T  P  P  R  C  F  *  L  L  L  T  N  N  I </second_frame>
            <third_frame>   F  L  V  K  S  S  K  I  F  P  Q  F  I  S  A  P  P  S  S  Y  W  I  C  S  I  W  S  S  P  *  *  A  L  W  F  L  P  R  L  V  N  L  E  P  R  F  *  G  H  G  Y  R  Y  S  *  *  K  F  D  G  *  L  W  F  S  Y  Y  F  E  C  W  C  C  C  S  K  E  Y  V  R  Q  C  F  S  *  V  W  H  D  L  F  P  K  T  *  S  I  V  P  R  *  W  S  F  P  R  T  C  S  Y  *  L  *  G  A  D  *  T  Q  S  H  S  T  C  *  K  *  *  W  E  P  D  G  *  Q  E  A  L  S  T  *  F  G  *  D  *  M  W  *  R  Y  S  D  N  F  D  D  *  K  Y  S  *  Q  :  V  H  L  Q  D  A  F  S  C  Y  *  R  T  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28659" stop="29149"/>
                    <exon start="29236" stop="29278"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSLSNHQKSFLNSSQHHLHHIGSAPSGLPLDRHFGFYPDSSILSPGFRGMGIGTRDESLMVNYGSRTTLNAGVAVPRNMSDNASPRFGMISSQKLSPLFLGNGHFPGHAATSFEGLTERSRTRRVENNNGNQMDNKKLFLLDLDKIRCGEDTRTTLMIKNIPNKYTSKMLLAAIDEQH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="29789" PGL_stop="30549"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29789" e_stop="29869"/>
            <exon e_start="30061" e_stop="30549"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.962" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29789" e_stop="29869" e_length="81"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.962">
            <gDNA_intron_boundary i_start="29870" i_stop="30060" i_length="191"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="30061" e_stop="30549" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29789" stop="29869"/>
              <exon start="30061" stop="30549"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583784" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGAATTCAAGTTTGATGAATGAAGATAAGCGATGTAGGCCAATCCTTTTCCACTCAGAAAGTTCAGAATTGGGGGATCAG : ATTGTTCAGGAACATCTTTCATCAGGCTGCAGCCAACCTGAGGATCCAGTTGGCAAATTGGAGAATCGCTAGCAGTAGCATTGAAATGTTTTTTTTTTGCTCGCGGCTTTAAGAGTGCAGCTGGCTAGTACAAGTGTGAGATACATGTGCAGAGTAGCATGATTTGAGGCACAGAATAGAAGTATGAAGATCTTTTGTATTATAATGAGTAGGTGTTTTTGGTTCAAAATCTAAGAGGGGGAGGGTTCTGTTAGACTAAGTACATCAAGCATCTGTGTAGTTCATGTTGTAATCCTATGGCAAGTTGAAATGGCAAAGGCTATCTCAACATGGCATGCAAGGTCGTAGTTTTGTAACATTGTTTTGGTGGTTAGAGTGAAGAGGGGATGCTTGAAATTTGTAAAGTGGGAAGGCAAGCTGGGCTGTTGTTTTGTATCAAACAAGCATTTTGGTATTTATGTGAAACTTGCTAGAAAATTGCATAAAATT</gDNA_template>
            <first_frame> Q  N  S  S  L  M  N  E  D  K  R  C  R  P  I  L  F  H  S  E  S  S  E  L  G  D  Q  :  I  V  Q  E  H  L  S  S  G  C  S  Q  P  E  D  P  V  G  K  L  E  N  R  *  Q  *  H  *  N  V  F  F  L  L  A  A  L  R  V  Q  L  A  S  T  S  V  R  Y  M  C  R  V  A  *  F  E  A  Q  N  R  S  M  K  I  F  C  I  I  M  S  R  C  F  W  F  K  I  *  E  G  E  G  S  V  R  L  S  T  S  S  I  C  V  V  H  V  V  I  L  W  Q  V  E  M  A  K  A  I  S  T  W  H  A  R  S  *  F  C  N  I  V  L  V  V  R  V  K  R  G  C  L  K  F  V  K  W  E  G  K  L  G  C  C  F  V  S  N  K  H  F  G  I  Y  V  K  L  A  R  K  L  H  K  I </first_frame>
            <second_frame>  R  I  Q  V  *  *  M  K  I  S  D  V  G  Q  S  F  S  T  Q  K  V  Q  N  W  G  I  R :   L  F  R  N  I  F  H  Q  A  A  A  N  L  R  I  Q  L  A  N  W  R  I  A  S  S  S  I  E  M  F  F  F  C  S  R  L  *  E  C  S  W  L  V  Q  V  *  D  T  C  A  E  *  H  D  L  R  H  R  I  E  V  *  R  S  F  V  L  *  *  V  G  V  F  G  S  K  S  K  R  G  R  V  L  L  D  *  V  H  Q  A  S  V  *  F  M  L  *  S  Y  G  K  L  K  W  Q  R  L  S  Q  H  G  M  Q  G  R  S  F  V  T  L  F  W  W  L  E  *  R  G  D  A  *  N  L  *  S  G  K  A  S  W  A  V  V  L  Y  Q  T  S  I  L  V  F  M  *  N  L  L  E  N  C  I  K   </second_frame>
            <third_frame>   E  F  K  F  D  E  *  R  *  A  M  *  A  N  P  F  P  L  R  K  F  R  I  G  G  S   : D  C  S  G  T  S  F  I  R  L  Q  P  T  *  G  S  S  W  Q  I  G  E  S  L  A  V  A  L  K  C  F  F  F  A  R  G  F  K  S  A  A  G  *  Y  K  C  E  I  H  V  Q  S  S  M  I  *  G  T  E  *  K  Y  E  D  L  L  Y  Y  N  E  *  V  F  L  V  Q  N  L  R  G  G  G  F  C  *  T  K  Y  I  K  H  L  C  S  S  C  C  N  P  M  A  S  *  N  G  K  G  Y  L  N  M  A  C  K  V  V  V  L  *  H  C  F  G  G  *  S  E  E  G  M  L  E  I  C  K  V  G  R  Q  A  G  L  L  F  C  I  K  Q  A  F  W  Y  L  C  E  T  C  *  K  I  A  *  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="35446" PGL_stop="33517"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35446" e_stop="34773"/>
            <exon e_start="34301" e_stop="33517"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.881" acc_prob="0.983" e_score="0.999"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="35446" e_stop="34773" e_length="674"/>
          </exon>
          <intron i_serial="1" don_prob="0.881" acc_prob="0.983">
            <gDNA_intron_boundary i_start="34772" i_stop="34302" i_length="471"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="34301" e_stop="33517" e_length="785"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35446" stop="34773"/>
              <exon start="34301" stop="33517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584357" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCAACTGAAGCACAAGTTAAAGATATTGCACAGTGGTTACTAGTTGCTCATAAGGACTCTACAGGTTTAAGTACTGACTGCCTTGCGGATGCTGGTTATCCTGGTGCGGCTTTACTGGGAGATGCTGTTTGTGGCATGGCTACTGCGAGAATTACTTCCAAGGATTTTCTATTCTGGTTCAGGTCTCACACAGCTAAGGAAGTCAAGTGGGGAGGTGCTAAGCATCATCCAGATGATAAAGATGATGGAGGAAAAATGCACCCACGATCTTCATTTAATGCCTTTCTTGAAGTGGTTAAAAGCAGAAGTTTGCCATGGGAGATTCCGGAGATTAATGCCATTCATTCTCTACAAATCATAATGAGAGAATCAATCCAAGAGAACGAAAACAGCTCTCTAAAAACTTTGACTACTTCTCAACAGAATGATGCTGATGGGCCAAGCATGGATGAGCTTAGTTCTGTGGCAATGGAAATGGTTAGATTGATTGAGACAGCCACTGCTCCAATTTTCGGAGTTGATCCATCTGGCTTAATAAATGGATGGAATGAGAAGATTGCTGACTTAACAGGATTGCATGCTAGTGAAGCAGTTGGAATGTCTCTCATTAATGATATTACTCATGAAGATTCACGTGGAACTGTTGAAAAAGTTCTACATAGAGCTCTGTTAG : GTGAGGAGGAAAAAAATGTGGAAATAAAATTGCGAAGGTTTGGGAAAGATCCACCAGGATCAGTTATATACCTTGTGATCAATGCCTGCACAAGCCGGGACCACAAAAATGGTGTTGTTGGTGTGTCCTTTGTGGCTCAAGATGTCACTCCTGAGAAATTTATCATGGATAAATTCATACAGTTGCGAGGAGATTATGAGGCTATTGTACAAAGTCTTAGTCCATTGATTCCACCAATATTTGCTTCTGATGAAAATGCTTGTTGTTCGGAGTGGAATGCAGCAATGGAAAGATTGACTGGTTGGACAAAATATGAGGTCATGGGGAGGACTCTTCCCGGTGAAGTTTTTGGTGGTCTTTGTCGTCTTACGGGACAAGATGCCCTTACAAAATTTATGATTCTTTTCTACCAAGCAATTAGTGGTCATGACACCAAAAAGCTTCCCTTTGGCTTTTTTAATAGGAGAGGAGAGTTTTTGGAAGTGTTCCTAACAGCAAACAAGAGAACTGATGAACATGGGAATGTATGTGGGTGTTTCTGCTTCCTGCAGCCTATGACGATTGACCCAGAAGCATCAGATGAGAGACAAGACTCTAAAGATTCGCTTTGGAAATATAAAGAATATGCTTATGTACTACAGCAGATGAAAAATCCACTGAATGGAATCCAGTTTACCCATAAACTTCTTGAAGCAACCGGTGTTTCAGATAATCAGAAACAGCTTCTGGAGACAAGTGAAGCCTGTGAGAAACAGATACTGTCTGTTATTGACAATATGGATTTT</gDNA_template>
            <first_frame> T  N  *  S  T  S  *  R  Y  C  T  V  V  T  S  C  S  *  G  L  Y  R  F  K  Y  *  L  P  C  G  C  W  L  S  W  C  G  F  T  G  R  C  C  L  W  H  G  Y  C  E  N  Y  F  Q  G  F  S  I  L  V  Q  V  S  H  S  *  G  S  Q  V  G  R  C  *  A  S  S  R  *  *  R  *  W  R  K  N  A  P  T  I  F  I  *  C  L  S  *  S  G  *  K  Q  K  F  A  M  G  D  S  G  D  *  C  H  S  F  S  T  N  H  N  E  R  I  N  P  R  E  R  K  Q  L  S  K  N  F  D  Y  F  S  T  E  *  C  *  W  A  K  H  G  *  A  *  F  C  G  N  G  N  G  *  I  D  *  D  S  H  C  S  N  F  R  S  *  S  I  W  L  N  K  W  M  E  *  E  D  C  *  L  N  R  I  A  C  *  *  S  S  W  N  V  S  H  *  *  Y  Y  S  *  R  F  T  W  N  C  *  K  S  S  T  *  S  S  V  R :   *  G  G  K  K  C  G  N  K  I  A  K  V  W  E  R  S  T  R  I  S  Y  I  P  C  D  Q  C  L  H  K  P  G  P  Q  K  W  C  C  W  C  V  L  C  G  S  R  C  H  S  *  E  I  Y  H  G  *  I  H  T  V  A  R  R  L  *  G  Y  C  T  K  S  *  S  I  D  S  T  N  I  C  F  *  *  K  C  L  L  F  G  V  E  C  S  N  G  K  I  D  W  L  D  K  I  *  G  H  G  E  D  S  S  R  *  S  F  W  W  S  L  S  S  Y  G  T  R  C  P  Y  K  I  Y  D  S  F  L  P  S  N  *  W  S  *  H  Q  K  A  S  L  W  L  F  *  *  E  R  R  V  F  G  S  V  P  N  S  K  Q  E  N  *  *  T  W  E  C  M  W  V  F  L  L  P  A  A  Y  D  D  *  P  R  S  I  R  *  E  T  R  L  *  R  F  A  L  E  I  *  R  I  C  L  C  T  T  A  D  E  K  S  T  E  W  N  P  V  Y  P  *  T  S  *  S  N  R  C  F  R  *  S  E  T  A  S  G  D  K  *  S  L  *  E  T  D  T  V  C  Y  *  Q  Y  G  F  </first_frame>
            <second_frame>  P  T  E  A  Q  V  K  D  I  A  Q  W  L  L  V  A  H  K  D  S  T  G  L  S  T  D  C  L  A  D  A  G  Y  P  G  A  A  L  L  G  D  A  V  C  G  M  A  T  A  R  I  T  S  K  D  F  L  F  W  F  R  S  H  T  A  K  E  V  K  W  G  G  A  K  H  H  P  D  D  K  D  D  G  G  K  M  H  P  R  S  S  F  N  A  F  L  E  V  V  K  S  R  S  L  P  W  E  I  P  E  I  N  A  I  H  S  L  Q  I  I  M  R  E  S  I  Q  E  N  E  N  S  S  L  K  T  L  T  T  S  Q  Q  N  D  A  D  G  P  S  M  D  E  L  S  S  V  A  M  E  M  V  R  L  I  E  T  A  T  A  P  I  F  G  V  D  P  S  G  L  I  N  G  W  N  E  K  I  A  D  L  T  G  L  H  A  S  E  A  V  G  M  S  L  I  N  D  I  T  H  E  D  S  R  G  T  V  E  K  V  L  H  R  A  L  L   : G  E  E  E  K  N  V  E  I  K  L  R  R  F  G  K  D  P  P  G  S  V  I  Y  L  V  I  N  A  C  T  S  R  D  H  K  N  G  V  V  G  V  S  F  V  A  Q  D  V  T  P  E  K  F  I  M  D  K  F  I  Q  L  R  G  D  Y  E  A  I  V  Q  S  L  S  P  L  I  P  P  I  F  A  S  D  E  N  A  C  C  S  E  W  N  A  A  M  E  R  L  T  G  W  T  K  Y  E  V  M  G  R  T  L  P  G  E  V  F  G  G  L  C  R  L  T  G  Q  D  A  L  T  K  F  M  I  L  F  Y  Q  A  I  S  G  H  D  T  K  K  L  P  F  G  F  F  N  R  R  G  E  F  L  E  V  F  L  T  A  N  K  R  T  D  E  H  G  N  V  C  G  C  F  C  F  L  Q  P  M  T  I  D  P  E  A  S  D  E  R  Q  D  S  K  D  S  L  W  K  Y  K  E  Y  A  Y  V  L  Q  Q  M  K  N  P  L  N  G  I  Q  F  T  H  K  L  L  E  A  T  G  V  S  D  N  Q  K  Q  L  L  E  T  S  E  A  C  E  K  Q  I  L  S  V  I  D  N  M  D  F </second_frame>
            <third_frame>   Q  L  K  H  K  L  K  I  L  H  S  G  Y  *  L  L  I  R  T  L  Q  V  *  V  L  T  A  L  R  M  L  V  I  L  V  R  L  Y  W  E  M  L  F  V  A  W  L  L  R  E  L  L  P  R  I  F  Y  S  G  S  G  L  T  Q  L  R  K  S  S  G  E  V  L  S  I  I  Q  M  I  K  M  M  E  E  K  C  T  H  D  L  H  L  M  P  F  L  K  W  L  K  A  E  V  C  H  G  R  F  R  R  L  M  P  F  I  L  Y  K  S  *  *  E  N  Q  S  K  R  T  K  T  A  L  *  K  L  *  L  L  L  N  R  M  M  L  M  G  Q  A  W  M  S  L  V  L  W  Q  W  K  W  L  D  *  L  R  Q  P  L  L  Q  F  S  E  L  I  H  L  A  *  *  M  D  G  M  R  R  L  L  T  *  Q  D  C  M  L  V  K  Q  L  E  C  L  S  L  M  I  L  L  M  K  I  H  V  E  L  L  K  K  F  Y  I  E  L  C  *  :  V  R  R  K  K  M  W  K  *  N  C  E  G  L  G  K  I  H  Q  D  Q  L  Y  T  L  *  S  M  P  A  Q  A  G  T  T  K  M  V  L  L  V  C  P  L  W  L  K  M  S  L  L  R  N  L  S  W  I  N  S  Y  S  C  E  E  I  M  R  L  L  Y  K  V  L  V  H  *  F  H  Q  Y  L  L  L  M  K  M  L  V  V  R  S  G  M  Q  Q  W  K  D  *  L  V  G  Q  N  M  R  S  W  G  G  L  F  P  V  K  F  L  V  V  F  V  V  L  R  D  K  M  P  L  Q  N  L  *  F  F  S  T  K  Q  L  V  V  M  T  P  K  S  F  P  L  A  F  L  I  G  E  E  S  F  W  K  C  S  *  Q  Q  T  R  E  L  M  N  M  G  M  Y  V  G  V  S  A  S  C  S  L  *  R  L  T  Q  K  H  Q  M  R  D  K  T  L  K  I  R  F  G  N  I  K  N  M  L  M  Y  Y  S  R  *  K  I  H  *  M  E  S  S  L  P  I  N  F  L  K  Q  P  V  F  Q  I  I  R  N  S  F  W  R  Q  V  K  P  V  R  N  R  Y  C  L  L  L  T  I  W  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35445" stop="34773"/>
                    <exon start="34301" stop="33517"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1458</number_coding_nucleotides>
                  <number_encoded_amino_acids>486</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PTEAQVKDIAQWLLVAHKDSTGLSTDCLADAGYPGAALLGDAVCGMATARITSKDFLFWFRSHTAKEVKWGGAKHHPDDKDDGGKMHPRSSFNAFLEVVKSRSLPWEIPEINAIHSLQIIMRESIQENENSSLKTLTTSQQNDADGPSMDELSSVAMEMVRLIETATAPIFGVDPSGLINGWNEKIADLTGLHASEAVGMSLINDITHEDSRGTVEKVLHRALLGEEEKNVEIKLRRFGKDPPGSVIYLVINACTSRDHKNGVVGVSFVAQDVTPEKFIMDKFIQLRGDYEAIVQSLSPLIPPIFASDENACCSEWNAAMERLTGWTKYEVMGRTLPGEVFGGLCRLTGQDALTKFMILFYQAISGHDTKKLPFGFFNRRGEFLEVFLTANKRTDEHGNVCGCFCFLQPMTIDPEASDERQDSKDSLWKYKEYAYVLQQMKNPLNGIQFTHKLLEATGVSDNQKQLLETSEACEKQILSVIDNMDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="49457" PGL_stop="56548"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49457" e_stop="49520"/>
            <exon e_start="51114" e_stop="51379"/>
            <exon e_start="51567" e_stop="51694"/>
            <exon e_start="53685" e_stop="53808"/>
            <exon e_start="54090" e_stop="54611"/>
            <exon e_start="54867" e_stop="55204"/>
            <exon e_start="55881" e_stop="56548"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.326" e_score="0.969"/>
          <exon-intron don_prob="0.999" acc_prob="0.923" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="0.997"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="49457" e_stop="49520" e_length="64"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.326">
            <gDNA_intron_boundary i_start="49521" i_stop="51113" i_length="1593"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="51114" e_stop="51379" e_length="266"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.923">
            <gDNA_intron_boundary i_start="51380" i_stop="51566" i_length="187"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51567" e_stop="51694" e_length="128"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.933">
            <gDNA_intron_boundary i_start="51695" i_stop="53684" i_length="1990"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53685" e_stop="53808" e_length="124"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.955">
            <gDNA_intron_boundary i_start="53809" i_stop="54089" i_length="281"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54090" e_stop="54611" e_length="522"/>
          </exon>
          <intron i_serial="5" don_prob="0.953" acc_prob="0.974">
            <gDNA_intron_boundary i_start="54612" i_stop="54866" i_length="255"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="54867" e_stop="55204" e_length="338"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="55205" i_stop="55880" i_length="676"/>
          </intron>
          <exon e_serial="7" e_score="0.997">
            <gDNA_exon_boundary e_start="55881" e_stop="56548" e_length="668"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49457" stop="49520"/>
              <exon start="51114" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54611"/>
              <exon start="54867" stop="55204"/>
              <exon start="55881" stop="56548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51232" stop="51379"/>
              <exon start="51567" stop="51694"/>
              <exon start="53685" stop="53808"/>
              <exon start="54090" stop="54216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595048" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54905" stop="55204"/>
              <exon start="55881" stop="56038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595044" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGAGAGAGAAAAGCGCGCGTCTAGAGAGAGAAAGTGAGAGAGACGCTTGGTGACTCTACCAG : TCTCTTGTGGCTGATACTATATCTGCTTGAAGGGGTTTTGAATCCCTACTGATGCTTTCAGATCAAGATTGTGCTACACATTCCAAGTACGAATCAAATGCCATCTCTAAGAATGAAGACAAAGCTAGCCACATCCAGTTCGAAAGAAAAAAATGGTCTCCATGTCTGTCCAAATTCTAGTGTCATATCCAAGAGTTCTCTCTCTCGAACCAGAAGTGTGCAGAATGCAGACGAAGTTGCAGATCTGATTCACAATACTCATGATG : TTCCTAGCTACTACAAAGTTCATCCACACCAAGTCGGAAGAAATGGTGATCATGCTAATGATTTGGTAGATGACCTTCTTGAAAAGCAACAGCCACCTGTTACTGATTCTGCAAACCTTGATACCACG : GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTGGTGCGCACAGTGAGTCTGATATACCAAGTGATGGAG : CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATTTGCCAGACATATTAGAGAGGCCAAGTATTTTGCCAAACGAATCAGAAACATGCAAACCGATCACCCTAGTACTTGACCTAGATG : AAACACTTGTTCATTCTACACTGGAGCACTGTGACGATGCAGACTTCACATTTCCTGTTTTCTTCAGCATGAAAGAACACATTGTCTATGTGAAACAGCGGCCTCACCTCCAGACATTCTTGGAGAGAGTTGCAGAGATGTTTGACATTGTAATTTTTACTGCTAGTCAGAGCATATATGCGAAGCAATTGTTGGATATTCTGGATCCAGATGGAAAGATTATCTCAAGGCGAGCATATCGTGAATCATGCATCTTCTCTGATGGAAGTTATACAAAGGATTTAACGGTATTAGGTGTTGATCTGGCAAAAGTTGTCATTGTAGATAATTCCCCACAG : GTTTTCAGATTGCAAGTGAATAATGGGATTCCTATTAAGAGTTGGTTTGATGATCCTTCAGACTCTGCACTAATTTCTTTACTTCCATTCCTAGAGACACTGGCTGATGCTGATGATGTCCGACCTATTATTGCTAAGAAATTCGGTAACAAGGAATAAGAGGCCCTTGTTTCTTCCTAGTAGTTCCTCTAACACCTCCTCTCTTCTCATTTAAACAAATTTATCCTTCATTTACATGCTCATTGTTCTATCCTCATTGAGCCTTGATATAATTGGGGTGTGCAATAAAAATACTAGTCCTTTTCTGGTTGAGTCAGTTTTTTTGTGCGCAGTCCTTTTCTTGTTTCCACCCTGTTGACAACTTTCTTCAGTCCATTGCTTACTAATTTGTTTCAAATATAGTTGCAAGAAGTTCTCCTTGTGTGCACTGTACAGTTATATTTGCCTAGTTATTTACAAGCTTGTGTATATGGATTGATCTATTGTGAAATAAATCGTGATTTCGTGTTTCGTTATCGTAGCATAAAGCTGTCCGTTGGACTAAATTACACCTGTTCATTGTATAGCCTTTGCACAATCTAGTGTACTTGTCAATTTTGCAGTAACACAAGTTCCCAATCAAAGGCTAATTGGCCAAAAACATCAGGGTTGGCAGTCGAAATAGGTTT</gDNA_template>
            <first_frame> K  E  R  E  K  R  A  S  R  E  R  K  *  E  R  R  L  V  T  L  P   : V  S  C  G  *  Y  Y  I  C  L  K  G  F  *  I  P  T  D  A  F  R  S  R  L  C  Y  T  F  Q  V  R  I  K  C  H  L  *  E  *  R  Q  S  *  P  H  P  V  R  K  K  K  M  V  S  M  S  V  Q  I  L  V  S  Y  P  R  V  L  S  L  E  P  E  V  C  R  M  Q  T  K  L  Q  I  *  F  T  I  L  M  M  :  F  L  A  T  T  K  F  I  H  T  K  S  E  E  M  V  I  M  L  M  I  W  *  M  T  F  L  K  S  N  S  H  L  L  L  I  L  Q  T  L  I  P  R :   F  W  N  R  C  R  S  L  Q  *  *  S  A  N  Q  V  Q  R  Q  S  F  H  L  V  W  S  L  L  V  V  R  T  V  S  L  I  Y  Q  V  M  E  :  Q  T  M  I  F  M  Y  P  N  W  R  L  K  I  V  I  A  A  E  V  R  V  N  I  R  R  A  M  F  Q  I  S  T  S  L  I  *  L  F  L  V  W  L  L  R  V  K  P  S  M  I  T  V  *  L  T  G  S  W  L  I  T  S  V  K  N  Q  I  F  L  I  M  L  M  R  N  T  C  C  C  L  S  L  K  T  L  Q  Q  L  A  I  V  K  C  A  E  R  L  V  K  K  L  L  F  S  L  M  I  R  A  Y  T  W  Q  F  T  S  L  D  H  L  N  N  L  M  L  S  H  I  *  N  L  I  K  Q  N  A  L  T  H  I  Y  S  *  E  I  C  Q  T  Y  *  R  G  Q  V  F  C  Q  T  N  Q  K  H  A  N  R  S  P  *  Y  L  T  *  M  :  K  H  L  F  I  L  H  W  S  T  V  T  M  Q  T  S  H  F  L  F  S  S  A  *  K  N  T  L  S  M  *  N  S  G  L  T  S  R  H  S  W  R  E  L  Q  R  C  L  T  L  *  F  L  L  L  V  R  A  Y  M  R  S  N  C  W  I  F  W  I  Q  M  E  R  L  S  Q  G  E  H  I  V  N  H  A  S  S  L  M  E  V  I  Q  R  I  *  R  Y  *  V  L  I  W  Q  K  L  S  L  *  I  I  P  H  R :   F  S  D  C  K  *  I  M  G  F  L  L  R  V  G  L  M  I  L  Q  T  L  H  *  F  L  Y  F  H  S  *  R  H  W  L  M  L  M  M  S  D  L  L  L  L  R  N  S  V  T  R  N  K  R  P  L  F  L  P  S  S  S  S  N  T  S  S  L  L  I  *  T  N  L  S  F  I  Y  M  L  I  V  L  S  S  L  S  L  D  I  I  G  V  C  N  K  N  T  S  P  F  L  V  E  S  V  F  L  C  A  V  L  F  L  F  P  P  C  *  Q  L  S  S  V  H  C  L  L  I  C  F  K  Y  S  C  K  K  F  S  L  C  A  L  Y  S  Y  I  C  L  V  I  Y  K  L  V  Y  M  D  *  S  I  V  K  *  I  V  I  S  C  F  V  I  V  A  *  S  C  P  L  D  *  I  T  P  V  H  C  I  A  F  A  Q  S  S  V  L  V  N  F  A  V  T  Q  V  P  N  Q  R  L  I  G  Q  K  H  Q  G  W  Q  S  K  *  V  </first_frame>
            <second_frame>  K  R  E  K  S  A  R  L  E  R  E  S  E  R  D  A  W  *  L  Y  Q  :  S  L  V  A  D  T  I  S  A  *  R  G  F  E  S  L  L  M  L  S  D  Q  D  C  A  T  H  S  K  Y  E  S  N  A  I  S  K  N  E  D  K  A  S  H  I  Q  F  E  R  K  K  W  S  P  C  L  S  K  F  *  C  H  I  Q  E  F  S  L  S  N  Q  K  C  A  E  C  R  R  S  C  R  S  D  S  Q  Y  S  *  C :   S  *  L  L  Q  S  S  S  T  P  S  R  K  K  W  *  S  C  *  *  F  G  R  *  P  S  *  K  A  T  A  T  C  Y  *  F  C  K  P  *  Y  H   : G  F  G  I  G  A  G  V  Y  S  S  D  L  Q  T  K  F  R  D  N  L  F  T  *  C  G  A  C  *  W  C  A  Q  *  V  *  Y  T  K  *  W  S :   K  Q  *  F  L  C  T  P  I  G  D  *  R  *  *  *  Q  Q  K  F  V  *  T  S  D  V  Q  C  F  R  F  L  H  L  *  Y  D  C  F  L  F  G  C  *  G  *  N  H  L  *  *  Q  F  D  *  Q  V  L  G  *  L  Q  V  *  R  T  K  Y  F  *  *  C  *  *  G  I  L  A  V  A  F  P  *  R  H  C  S  S  *  L  *  S  S  V  Q  N  V  *  *  R  N  C  C  S  V  *  *  F  E  L  I  H  G  N  S  P  A  *  I  I  *  T  I  *  C  F  H  I  F  R  I  *  S  S  R  M  L  *  P  T  Y  I  H  K  K  F  A  R  H  I  R  E  A  K  Y  F  A  K  R  I  R  N  M  Q  T  D  H  P  S  T  *  P  R  * :   N  T  C  S  F  Y  T  G  A  L  *  R  C  R  L  H  I  S  C  F  L  Q  H  E  R  T  H  C  L  C  E  T  A  A  S  P  P  D  I  L  G  E  S  C  R  D  V  *  H  C  N  F  Y  C  *  S  E  H  I  C  E  A  I  V  G  Y  S  G  S  R  W  K  D  Y  L  K  A  S  I  S  *  I  M  H  L  L  *  W  K  L  Y  K  G  F  N  G  I  R  C  *  S  G  K  S  C  H  C  R  *  F  P  T   : G  F  Q  I  A  S  E  *  W  D  S  Y  *  E  L  V  *  *  S  F  R  L  C  T  N  F  F  T  S  I  P  R  D  T  G  *  C  *  *  C  P  T  Y  Y  C  *  E  I  R  *  Q  G  I  R  G  P  C  F  F  L  V  V  P  L  T  P  P  L  F  S  F  K  Q  I  Y  P  S  F  T  C  S  L  F  Y  P  H  *  A  L  I  *  L  G  C  A  I  K  I  L  V  L  F  W  L  S  Q  F  F  C  A  Q  S  F  S  C  F  H  P  V  D  N  F  L  Q  S  I  A  Y  *  F  V  S  N  I  V  A  R  S  S  P  C  V  H  C  T  V  I  F  A  *  L  F  T  S  L  C  I  W  I  D  L  L  *  N  K  S  *  F  R  V  S  L  S  *  H  K  A  V  R  W  T  K  L  H  L  F  I  V  *  P  L  H  N  L  V  Y  L  S  I  L  Q  *  H  K  F  P  I  K  G  *  L  A  K  N  I  R  V  G  S  R  N  R  F </second_frame>
            <third_frame>   R  E  R  K  A  R  V  *  R  E  K  V  R  E  T  L  G  D  S  T  S :   L  L  W  L  I  L  Y  L  L  E  G  V  L  N  P  Y  *  C  F  Q  I  K  I  V  L  H  I  P  S  T  N  Q  M  P  S  L  R  M  K  T  K  L  A  T  S  S  S  K  E  K  N  G  L  H  V  C  P  N  S  S  V  I  S  K  S  S  L  S  R  T  R  S  V  Q  N  A  D  E  V  A  D  L  I  H  N  T  H  D   : V  P  S  Y  Y  K  V  H  P  H  Q  V  G  R  N  G  D  H  A  N  D  L  V  D  D  L  L  E  K  Q  Q  P  P  V  T  D  S  A  N  L  D  T  T  :  V  L  E  S  V  Q  E  S  T  V  V  I  C  K  P  S  S  E  T  I  F  S  P  S  V  E  P  V  S  G  A  H  S  E  S  D  I  P  S  D  G   : A  N  N  D  F  Y  V  P  Q  L  E  T  E  D  S  D  S  S  R  S  S  C  E  H  Q  T  C  N  V  S  D  F  Y  I  S  D  M  I  V  S  C  L  A  V  E  G  E  T  I  Y  D  N  S  L  T  D  R  F  L  A  D  Y  K  C  E  E  P  N  I  F  N  N  V  D  E  E  Y  L  L  L  P  F  L  E  D  T  A  A  A  S  Y  S  Q  V  C  R  T  S  S  E  E  T  A  V  Q  S  D  D  S  S  L  Y  M  A  I  H  Q  L  R  S  S  E  Q  S  D  A  F  T  Y  L  E  S  D  Q  A  E  C  F  D  P  H  I  F  I  R  N  L  P  D  I  L  E  R  P  S  I  L  P  N  E  S  E  T  C  K  P  I  T  L  V  L  D  L  D   : E  T  L  V  H  S  T  L  E  H  C  D  D  A  D  F  T  F  P  V  F  F  S  M  K  E  H  I  V  Y  V  K  Q  R  P  H  L  Q  T  F  L  E  R  V  A  E  M  F  D  I  V  I  F  T  A  S  Q  S  I  Y  A  K  Q  L  L  D  I  L  D  P  D  G  K  I  I  S  R  R  A  Y  R  E  S  C  I  F  S  D  G  S  Y  T  K  D  L  T  V  L  G  V  D  L  A  K  V  V  I  V  D  N  S  P  Q  :  V  F  R  L  Q  V  N  N  G  I  P  I  K  S  W  F  D  D  P  S  D  S  A  L  I  S  L  L  P  F  L  E  T  L  A  D  A  D  D  V  R  P  I  I  A  K  K  F  G  N  K  E  *  E  A  L  V  S  S  *  *  F  L  *  H  L  L  S  S  H  L  N  K  F  I  L  H  L  H  A  H  C  S  I  L  I  E  P  *  Y  N  W  G  V  Q  *  K  Y  *  S  F  S  G  *  V  S  F  F  V  R  S  P  F  L  V  S  T  L  L  T  T  F  F  S  P  L  L  T  N  L  F  Q  I  *  L  Q  E  V  L  L  V  C  T  V  Q  L  Y  L  P  S  Y  L  Q  A  C  V  Y  G  L  I  Y  C  E  I  N  R  D  F  V  F  R  Y  R  S  I  K  L  S  V  G  L  N  Y  T  C  S  L  Y  S  L  C  T  I  *  C  T  C  Q  F  C  S  N  T  S  S  Q  S  K  A  N  W  P  K  T  S  G  L  A  V  E  I  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51166" stop="51379"/>
                    <exon start="51567" stop="51694"/>
                    <exon start="53685" stop="53808"/>
                    <exon start="54090" stop="54611"/>
                    <exon start="54867" stop="55204"/>
                    <exon start="55881" stop="56039"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1482</number_coding_nucleotides>
                  <number_encoded_amino_acids>494</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFQIKIVLHIPSTNQMPSLRMKTKLATSSSKEKNGLHVCPNSSVISKSSLSRTRSVQNADEVADLIHNTHDVPSYYKVHPHQVGRNGDHANDLVDDLLEKQQPPVTDSANLDTTVLESVQESTVVICKPSSETIFSPSVEPVSGAHSESDIPSDGANNDFYVPQLETEDSDSSRSSCEHQTCNVSDFYISDMIVSCLAVEGETIYDNSLTDRFLADYKCEEPNIFNNVDEEYLLLPFLEDTAAASYSQVCRTSSEETAVQSDDSSLYMAIHQLRSSEQSDAFTYLESDQAECFDPHIFIRNLPDILERPSILPNESETCKPITLVLDLDETLVHSTLEHCDDADFTFPVFFSMKEHIVYVKQRPHLQTFLERVAEMFDIVIFTASQSIYAKQLLDILDPDGKIISRRAYRESCIFSDGSYTKDLTVLGVDLAKVVIVDNSPQVFRLQVNNGIPIKSWFDDPSDSALISLLPFLETLADADDVRPIIAKKFGNKE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="53685" e_stop="53772"/>
            <exon e_start="54090" e_stop="54527"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.955" e_score="0.989"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="53685" e_stop="53772" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.955">
            <gDNA_intron_boundary i_start="53773" i_stop="54089" i_length="317"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="54090" e_stop="54527" e_length="438"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53685" stop="53772"/>
              <exon start="54090" stop="54527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595046" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTTGGAATCGGTGCAGGAGTCTACAGTAGTGATCTGCAAACCAAGTTCAGAGACAATCTTTTCACCTAGTGTGGAGCCTGTTAGTG : CAAACAATGATTTTTATGTACCCCAATTGGAGACTGAAGATAGTGATAGCAGCAGAAGTTCGTGTGAACATCAGACGTGCAATGTTTCAGATTTCTACATCTCTGATATGATTGTTTCTTGTTTGGCTGTTGAGGGTGAAACCATCTATGATAACAGTTTGACTGACAGGTTCTTGGCTGATTACAAGTGTGAAGAACCAAATATTTTTAATAATGTTGATGAGGAATACTTGCTGTTGCCTTTCCTTGAAGACACTGCAGCAGCTAGCTATAGTCAAGTGTGCAGAACGTCTAGTGAAGAAACTGCTGTTCAGTCTGATGATTCGAGCTTATACATGGCAATTCACCAGCTTAGATCATCTGAACAATCTGATGCTTTCACATATTTAGAATCTGATCAAGCAGAATGCTTTGACCCACATATATTCATAAGAAATT</gDNA_template>
            <first_frame> V  L  E  S  V  Q  E  S  T  V  V  I  C  K  P  S  S  E  T  I  F  S  P  S  V  E  P  V  S   : A  N  N  D  F  Y  V  P  Q  L  E  T  E  D  S  D  S  S  R  S  S  C  E  H  Q  T  C  N  V  S  D  F  Y  I  S  D  M  I  V  S  C  L  A  V  E  G  E  T  I  Y  D  N  S  L  T  D  R  F  L  A  D  Y  K  C  E  E  P  N  I  F  N  N  V  D  E  E  Y  L  L  L  P  F  L  E  D  T  A  A  A  S  Y  S  Q  V  C  R  T  S  S  E  E  T  A  V  Q  S  D  D  S  S  L  Y  M  A  I  H  Q  L  R  S  S  E  Q  S  D  A  F  T  Y  L  E  S  D  Q  A  E  C  F  D  P  H  I  F  I  R  N  </first_frame>
            <second_frame>  F  W  N  R  C  R  S  L  Q  *  *  S  A  N  Q  V  Q  R  Q  S  F  H  L  V  W  S  L  L  V  :  Q  T  M  I  F  M  Y  P  N  W  R  L  K  I  V  I  A  A  E  V  R  V  N  I  R  R  A  M  F  Q  I  S  T  S  L  I  *  L  F  L  V  W  L  L  R  V  K  P  S  M  I  T  V  *  L  T  G  S  W  L  I  T  S  V  K  N  Q  I  F  L  I  M  L  M  R  N  T  C  C  C  L  S  L  K  T  L  Q  Q  L  A  I  V  K  C  A  E  R  L  V  K  K  L  L  F  S  L  M  I  R  A  Y  T  W  Q  F  T  S  L  D  H  L  N  N  L  M  L  S  H  I  *  N  L  I  K  Q  N  A  L  T  H  I  Y  S  *  E  I </second_frame>
            <third_frame>   F  G  I  G  A  G  V  Y  S  S  D  L  Q  T  K  F  R  D  N  L  F  T  *  C  G  A  C  *  C :   K  Q  *  F  L  C  T  P  I  G  D  *  R  *  *  *  Q  Q  K  F  V  *  T  S  D  V  Q  C  F  R  F  L  H  L  *  Y  D  C  F  L  F  G  C  *  G  *  N  H  L  *  *  Q  F  D  *  Q  V  L  G  *  L  Q  V  *  R  T  K  Y  F  *  *  C  *  *  G  I  L  A  V  A  F  P  *  R  H  C  S  S  *  L  *  S  S  V  Q  N  V  *  *  R  N  C  C  S  V  *  *  F  E  L  I  H  G  N  S  P  A  *  I  I  *  T  I  *  C  F  H  I  F  R  I  *  S  S  R  M  L  *  P  T  Y  I  H  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53685" stop="53772"/>
                    <exon start="54090" stop="54526"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLESVQESTVVICKPSSETIFSPSVEPVSANNDFYVPQLETEDSDSSRSSCEHQTCNVSDFYISDMIVSCLAVEGETIYDNSLTDRFLADYKCEEPNIFNNVDEEYLLLPFLEDTAAASYSQVCRTSSEETAVQSDDSSLYMAIHQLRSSEQSDAFTYLESDQAECFDPHIFIRN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="58281" PGL_stop="58677"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58281" e_stop="58677"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="58281" e_stop="58677" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58281" stop="58677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585204" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCATTGTGGGGGTCAGTGTGTAGTTCCGATAATTTGTTTGTTAGGTATATAATTGCAGGATGTTCCTTGGTATACCTGCTTCCCATCCTTCTAGTATTCTCGCCCATTCAAATCATGATATTATTGACTTTCTTTTCGATCAAAATGATTTCATAACCACACACAAAAAAAAGCCTCTTCCCTTTGAACATGATGCTTGATATTGACATGAGGGTTCTATTTCCCGGTATTGAATAGTTTAGGCAATTAAATTCTGCAAGAATGGATGTTTTCTAGGTGGTGATAAGGTGGTAGGGGAAGCTGCAAACGCTAGATAATGTCTATGGTGATGTAGAGGTTGGGACTAGACTACCAATTGGATGTTTCCCAGTCGAACCCTCTGTGCGGATACTGAG</gDNA_template>
            <first_frame> H  H  C  G  G  Q  C  V  V  P  I  I  C  L  L  G  I  *  L  Q  D  V  P  W  Y  T  C  F  P  S  F  *  Y  S  R  P  F  K  S  *  Y  Y  *  L  S  F  R  S  K  *  F  H  N  H  T  Q  K  K  A  S  S  L  *  T  *  C  L  I  L  T  *  G  F  Y  F  P  V  L  N  S  L  G  N  *  I  L  Q  E  W  M  F  S  R  W  *  *  G  G  R  G  S  C  K  R  *  I  M  S  M  V  M  *  R  L  G  L  D  Y  Q  L  D  V  S  Q  S  N  P  L  C  G  Y  *  </first_frame>
            <second_frame>  I  I  V  G  V  S  V  *  F  R  *  F  V  C  *  V  Y  N  C  R  M  F  L  G  I  P  A  S  H  P  S  S  I  L  A  H  S  N  H  D  I  I  D  F  L  F  D  Q  N  D  F  I  T  T  H  K  K  K  P  L  P  F  E  H  D  A  *  Y  *  H  E  G  S  I  S  R  Y  *  I  V  *  A  I  K  F  C  K  N  G  C  F  L  G  G  D  K  V  V  G  E  A  A  N  A  R  *  C  L  W  *  C  R  G  W  D  *  T  T  N  W  M  F  P  S  R  T  L  C  A  D  T  E </second_frame>
            <third_frame>   S  L  W  G  S  V  C  S  S  D  N  L  F  V  R  Y  I  I  A  G  C  S  L  V  Y  L  L  P  I  L  L  V  F  S  P  I  Q  I  M  I  L  L  T  F  F  S  I  K  M  I  S  *  P  H  T  K  K  S  L  F  P  L  N  M  M  L  D  I  D  M  R  V  L  F  P  G  I  E  *  F  R  Q  L  N  S  A  R  M  D  V  F  *  V  V  I  R  W  *  G  K  L  Q  T  L  D  N  V  Y  G  D  V  E  V  G  T  R  L  P  I  G  C  F  P  V  E  P  S  V  R  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="88920" PGL_stop="89929"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88920" e_stop="89196"/>
            <exon e_start="89280" e_stop="89929"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="0.931"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="88920" e_stop="89196" e_length="277"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="89197" i_stop="89279" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="89280" e_stop="89929" e_length="650"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88920" stop="89196"/>
              <exon start="89280" stop="89929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572839" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAATCCTTAAGATTCTGATTTGATATCTTCATTCGTATCTCTCTTTCTCTTCTGTCAAATATTTTCCGTATCTTCTCGAAATCAACATCACATCCCCCATATATATATAATTCACTTCACAAACTCACAAATTCATAAAAACAAATACAAATTCATAAAAAGAAATTCTTCTTACAATCAAACAATGGATACTCAATTTCATGTTTTAGCTGTTGATGACAGTATTATTGATAGAAAACTCATTGAAAGACTTCTCAAAACTTCATCTTATCAAG : TTACTGTTGTTGATTCTGGAAGTAAAGCTTTGGAGTTGCTTGAAGTAAGAGAAACGGGAGTGAATTTGATAATTACAGATTATAGTATGCCGGAAATGACTGGTTATGATTTATTGAGGAAAGTTAAAGGATCATCTTATTTGAAGGATATTCCAGTTATAATTATGTCATCGGAAAATGTTCCATCAAGGATTAATAGATGTTTAGAAGAAGGAGCTGAAGAGTTTTTTCTGAAGCCAGTTCAACAATCAGATGTTAACAGAATTAAGCCTCATTTAATGAGGGAGAAACCTAATTCTCTAAAGAGAAAAGCTATGGTTGAATGCATTTCACCTGACAGAACCAGAAAATACAGCAGCAACAACAACAACAGTTTATGTAGCATCTTTTTGCAGAACATTTGTGAGTGAAGGGGAAATTGTTTCAGAGAAACATATTCAGTGTAATCTCTCGCTCGCAATTGAGATCTCAGATCTGAGATCTAAGAAGGGCTGGGCAGATCCAGATCGAGGTGTTTATATCAAACAGACGAATTTAAAAGAATTATCGAAGAATTATAGAAAAAAATTTGTTGAAGATGGATGGGAAGTGACTGGATTAACACTTTGTTTATATCAATCAAGCAGATCTGATCTGATTTGGGACTAATT</gDNA_template>
            <first_frame> E  N  P  *  D  S  D  L  I  S  S  F  V  S  L  F  L  F  C  Q  I  F  S  V  S  S  R  N  Q  H  H  I  P  H  I  Y  I  I  H  F  T  N  S  Q  I  H  K  N  K  Y  K  F  I  K  R  N  S  S  Y  N  Q  T  M  D  T  Q  F  H  V  L  A  V  D  D  S  I  I  D  R  K  L  I  E  R  L  L  K  T  S  S  Y  Q   : V  T  V  V  D  S  G  S  K  A  L  E  L  L  E  V  R  E  T  G  V  N  L  I  I  T  D  Y  S  M  P  E  M  T  G  Y  D  L  L  R  K  V  K  G  S  S  Y  L  K  D  I  P  V  I  I  M  S  S  E  N  V  P  S  R  I  N  R  C  L  E  E  G  A  E  E  F  F  L  K  P  V  Q  Q  S  D  V  N  R  I  K  P  H  L  M  R  E  K  P  N  S  L  K  R  K  A  M  V  E  C  I  S  P  D  R  T  R  K  Y  S  S  N  N  N  N  S  L  C  S  I  F  L  Q  N  I  C  E  *  R  G  N  C  F  R  E  T  Y  S  V  *  S  L  A  R  N  *  D  L  R  S  E  I  *  E  G  L  G  R  S  R  S  R  C  L  Y  Q  T  D  E  F  K  R  I  I  E  E  L  *  K  K  I  C  *  R  W  M  G  S  D  W  I  N  T  L  F  I  S  I  K  Q  I  *  S  D  L  G  L  I </first_frame>
            <second_frame>  K  I  L  K  I  L  I  *  Y  L  H  S  Y  L  S  F  S  S  V  K  Y  F  P  Y  L  L  E  I  N  I  T  S  P  I  Y  I  *  F  T  S  Q  T  H  K  F  I  K  T  N  T  N  S  *  K  E  I  L  L  T  I  K  Q  W  I  L  N  F  M  F  *  L  L  M  T  V  L  L  I  E  N  S  L  K  D  F  S  K  L  H  L  I  K  :  L  L  L  L  I  L  E  V  K  L  W  S  C  L  K  *  E  K  R  E  *  I  *  *  L  Q  I  I  V  C  R  K  *  L  V  M  I  Y  *  G  K  L  K  D  H  L  I  *  R  I  F  Q  L  *  L  C  H  R  K  M  F  H  Q  G  L  I  D  V  *  K  K  E  L  K  S  F  F  *  S  Q  F  N  N  Q  M  L  T  E  L  S  L  I  *  *  G  R  N  L  I  L  *  R  E  K  L  W  L  N  A  F  H  L  T  E  P  E  N  T  A  A  T  T  T  T  V  Y  V  A  S  F  C  R  T  F  V  S  E  G  E  I  V  S  E  K  H  I  Q  C  N  L  S  L  A  I  E  I  S  D  L  R  S  K  K  G  W  A  D  P  D  R  G  V  Y  I  K  Q  T  N  L  K  E  L  S  K  N  Y  R  K  K  F  V  E  D  G  W  E  V  T  G  L  T  L  C  L  Y  Q  S  S  R  S  D  L  I  W  D  *   </second_frame>
            <third_frame>   K  S  L  R  F  *  F  D  I  F  I  R  I  S  L  S  L  L  S  N  I  F  R  I  F  S  K  S  T  S  H  P  P  Y  I  Y  N  S  L  H  K  L  T  N  S  *  K  Q  I  Q  I  H  K  K  K  F  F  L  Q  S  N  N  G  Y  S  I  S  C  F  S  C  *  *  Q  Y  Y  *  *  K  T  H  *  K  T  S  Q  N  F  I  L  S  S :   Y  C  C  *  F  W  K  *  S  F  G  V  A  *  S  K  R  N  G  S  E  F  D  N  Y  R  L  *  Y  A  G  N  D  W  L  *  F  I  E  E  S  *  R  I  I  L  F  E  G  Y  S  S  Y  N  Y  V  I  G  K  C  S  I  K  D  *  *  M  F  R  R  R  S  *  R  V  F  S  E  A  S  S  T  I  R  C  *  Q  N  *  A  S  F  N  E  G  E  T  *  F  S  K  E  K  S  Y  G  *  M  H  F  T  *  Q  N  Q  K  I  Q  Q  Q  Q  Q  Q  Q  F  M  *  H  L  F  A  E  H  L  *  V  K  G  K  L  F  Q  R  N  I  F  S  V  I  S  R  S  Q  L  R  S  Q  I  *  D  L  R  R  A  G  Q  I  Q  I  E  V  F  I  S  N  R  R  I  *  K  N  Y  R  R  I  I  E  K  N  L  L  K  M  D  G  K  *  L  D  *  H  F  V  Y  I  N  Q  A  D  L  I  *  F  G  T  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88932" stop="89196"/>
                    <exon start="89280" stop="89689"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSDLISSFVSLFLFCQIFSVSSRNQHHIPHIYIIHFTNSQIHKNKYKFIKRNSSYNQTMDTQFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGSKALELLEVRETGVNLIITDYSMPEMTGYDLLRKVKGSSYLKDIPVIIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNRIKPHLMREKPNSLKRKAMVECISPDRTRKYSSNNNNSLCSIFLQNICE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="92207" PGL_stop="96489"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92207" e_stop="92580"/>
            <exon e_start="92722" e_stop="92835"/>
            <exon e_start="95202" e_stop="95297"/>
            <exon e_start="95390" e_stop="95454"/>
            <exon e_start="95983" e_stop="96052"/>
            <exon e_start="96130" e_stop="96489"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.898" acc_prob="0.999" e_score="0.997"/>
          <exon-intron don_prob="0.201" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.902" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="92207" e_stop="92580" e_length="374"/>
          </exon>
          <intron i_serial="1" don_prob="0.898" acc_prob="0.999">
            <gDNA_intron_boundary i_start="92581" i_stop="92721" i_length="141"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92722" e_stop="92835" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.201" acc_prob="0.942">
            <gDNA_intron_boundary i_start="92836" i_stop="95201" i_length="2366"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95202" e_stop="95297" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.902" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95298" i_stop="95389" i_length="92"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="95390" e_stop="95454" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.910" acc_prob="0.998">
            <gDNA_intron_boundary i_start="95455" i_stop="95982" i_length="528"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="95983" e_stop="96052" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.971">
            <gDNA_intron_boundary i_start="96053" i_stop="96129" i_length="77"/>
          </intron>
          <exon e_serial="6" e_score="0.994">
            <gDNA_exon_boundary e_start="96130" e_stop="96489" e_length="360"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92207" stop="92580"/>
              <exon start="92722" stop="92835"/>
              <exon start="95202" stop="95297"/>
              <exon start="95390" stop="95454"/>
              <exon start="95983" stop="96052"/>
              <exon start="96130" stop="96489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572045" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTGTTGTCGCTCTTCGTTCGACAAATGGCACACTATTTCTTGTACGTATGAATCAACCCTTCACTTTATACTGTCACTTCTCACTCTCCTTCTTCACCATTATTGTCTTTAACTCTGATTTCTCAGGCGACCCATCTCTGATTTCCACTTTCTTTATCTTCATTCGCCGGCGTATAAGTTAAACAGTAGAGGAATTTTAAAACAAAGATATAGAATGATGTCCCTTTCTCTTTCTCTTTCTTATCCTATACATCGTTTTGCTTCCTACAATAAACAACTATGCGCTTTGAGATCTCCTCAATCTCATCACACTAGGATTTCTCAGCACAAATTGCAGCAAAGCTCTAGTTTTCTTGGATATAACCCTCTCAG : AGTTTCAATTGATGTAAGTGGAGAGATGAATATGAAGAGACGTGGAGGAGTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT : GGTTCTCATGCTTGCGAAGGGCACTGCTATTCACAAGTCTTTTCTTGTTCCTTTATTTGCTTTACAAGCTCCTACTGCAGTTGTCTCGTGGATCCA : GGGTGAATATGGCATTTGGTCAGCATTTTTGGCACTTCTTGTTCGTCTCTTCTTCTCCTTTCCTG : GTGAACTTGAATTGCCATTTATAGCATTATTGATGGTAATTGTGGCTCCTTATCAAGTTGCAAATCTAAG : GGGGACAAAGGAAGGTGTCATTCTTTCCTTGGCTATAGCAGCTTATCTGGGTTTCCAGCATTTCACACGTGCTGGCAGCTTGCAGAAGGCGTTTGATCAAGGTTCAATTATTGCCACCCTAGCCATCATTTGTATTCTTGCTGTGCCATGCTTGCTCTTGATTTGATGTTAAACTACAGCGATTTCTCAAAGGAGTCCTGTAAATTATTTGAGTCATTTGAGGGTTGGAGATCACACAAATAAATATCTTTCTTTTAATCCCTCGTGTAAATTTCTAGCTGTTTATCTAGTCAAGTTTGTGGGACAAATTAAGGTGAATGTATTTATGCAGGAATAAATAGGATAAACAAGCTTTCATTT</gDNA_template>
            <first_frame> Y  C  C  R  S  S  F  D  K  W  H  T  I  S  C  T  Y  E  S  T  L  H  F  I  L  S  L  L  T  L  L  L  H  H  Y  C  L  *  L  *  F  L  R  R  P  I  S  D  F  H  F  L  Y  L  H  S  P  A  Y  K  L  N  S  R  G  I  L  K  Q  R  Y  R  M  M  S  L  S  L  S  L  S  Y  P  I  H  R  F  A  S  Y  N  K  Q  L  C  A  L  R  S  P  Q  S  H  H  T  R  I  S  Q  H  K  L  Q  Q  S  S  S  F  L  G  Y  N  P  L  R :   V  S  I  D  V  S  G  E  M  N  M  K  R  R  G  G  V  V  C  S  A  A  A  L  T  P  R  N  L  Q  W  V  C  T  I  S  S  V :   V  L  M  L  A  K  G  T  A  I  H  K  S  F  L  V  P  L  F  A  L  Q  A  P  T  A  V  V  S  W  I  Q :   G  E  Y  G  I  W  S  A  F  L  A  L  L  V  R  L  F  F  S  F  P   : G  E  L  E  L  P  F  I  A  L  L  M  V  I  V  A  P  Y  Q  V  A  N  L  R :   G  T  K  E  G  V  I  L  S  L  A  I  A  A  Y  L  G  F  Q  H  F  T  R  A  G  S  L  Q  K  A  F  D  Q  G  S  I  I  A  T  L  A  I  I  C  I  L  A  V  P  C  L  L  L  I  *  C  *  T  T  A  I  S  Q  R  S  P  V  N  Y  L  S  H  L  R  V  G  D  H  T  N  K  Y  L  S  F  N  P  S  C  K  F  L  A  V  Y  L  V  K  F  V  G  Q  I  K  V  N  V  F  M  Q  E  *  I  G  *  T  S  F  H   </first_frame>
            <second_frame>  I  V  V  A  L  R  S  T  N  G  T  L  F  L  V  R  M  N  Q  P  F  T  L  Y  C  H  F  S  L  S  F  F  T  I  I  V  F  N  S  D  F  S  G  D  P  S  L  I  S  T  F  F  I  F  I  R  R  R  I  S  *  T  V  E  E  F  *  N  K  D  I  E  *  C  P  F  L  F  L  F  L  I  L  Y  I  V  L  L  P  T  I  N  N  Y  A  L  *  D  L  L  N  L  I  T  L  G  F  L  S  T  N  C  S  K  A  L  V  F  L  D  I  T  L  S   : E  F  Q  L  M  *  V  E  R  *  I  *  R  D  V  E  E  W  F  V  L  L  L  L  L  L  L  E  I  Y  S  G  S  V  L  F  P  L   : W  F  S  C  L  R  R  A  L  L  F  T  S  L  F  L  F  L  Y  L  L  Y  K  L  L  L  Q  L  S  R  G  S   : R  V  N  M  A  F  G  Q  H  F  W  H  F  L  F  V  S  S  S  P  F  L  :  V  N  L  N  C  H  L  *  H  Y  *  W  *  L  W  L  L  I  K  L  Q  I  *   : G  G  Q  R  K  V  S  F  F  P  W  L  *  Q  L  I  W  V  S  S  I  S  H  V  L  A  A  C  R  R  R  L  I  K  V  Q  L  L  P  P  *  P  S  F  V  F  L  L  C  H  A  C  S  *  F  D  V  K  L  Q  R  F  L  K  G  V  L  *  I  I  *  V  I  *  G  L  E  I  T  Q  I  N  I  F  L  L  I  P  R  V  N  F  *  L  F  I  *  S  S  L  W  D  K  L  R  *  M  Y  L  C  R  N  K  *  D  K  Q  A  F  I  </second_frame>
            <third_frame>   L  L  S  L  F  V  R  Q  M  A  H  Y  F  L  Y  V  *  I  N  P  S  L  Y  T  V  T  S  H  S  P  S  S  P  L  L  S  L  T  L  I  S  Q  A  T  H  L  *  F  P  L  S  L  S  S  F  A  G  V  *  V  K  Q  *  R  N  F  K  T  K  I  *  N  D  V  P  F  S  F  S  F  L  S  Y  T  S  F  C  F  L  Q  *  T  T  M  R  F  E  I  S  S  I  S  S  H  *  D  F  S  A  Q  I  A  A  K  L  *  F  S  W  I  *  P  S  Q  :  S  F  N  *  C  K  W  R  D  E  Y  E  E  T  W  R  S  G  L  F  C  C  C  S  Y  S  *  K  S  T  V  G  L  Y  Y  F  L  C  :  G  S  H  A  C  E  G  H  C  Y  S  Q  V  F  S  C  S  F  I  C  F  T  S  S  Y  C  S  C  L  V  D  P  :  G  *  I  W  H  L  V  S  I  F  G  T  S  C  S  S  L  L  L  L  S  W :   *  T  *  I  A  I  Y  S  I  I  D  G  N  C  G  S  L  S  S  C  K  S  K  :  G  D  K  G  R  C  H  S  F  L  G  Y  S  S  L  S  G  F  P  A  F  H  T  C  W  Q  L  A  E  G  V  *  S  R  F  N  Y  C  H  P  S  H  H  L  Y  S  C  C  A  M  L  A  L  D  L  M  L  N  Y  S  D  F  S  K  E  S  C  K  L  F  E  S  F  E  G  W  R  S  H  K  *  I  S  F  F  *  S  L  V  *  I  S  S  C  L  S  S  Q  V  C  G  T  N  *  G  E  C  I  Y  A  G  I  N  R  I  N  K  L  S  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92327" stop="92580"/>
                    <exon start="92722" stop="92835"/>
                    <exon start="95202" stop="95297"/>
                    <exon start="95390" stop="95454"/>
                    <exon start="95983" stop="96052"/>
                    <exon start="96130" stop="96295"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLRRPISDFHFLYLHSPAYKLNSRGILKQRYRMMSLSLSLSYPIHRFASYNKQLCALRSPQSHHTRISQHKLQQSSSFLGYNPLRVSIDVSGEMNMKRRGGVVCSAAALTPRNLQWVCTISSVVLMLAKGTAIHKSFLVPLFALQAPTAVVSWIQGEYGIWSAFLALLVRLFFSFPGELELPFIALLMVIVAPYQVANLRGTKEGVILSLAIAAYLGFQHFTRAGSLQKAFDQGSIIATLAIICILAVPCLLLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="94040" e_stop="94772"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="94040" e_stop="94772" e_length="733"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94040" stop="94772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588648" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCACAGTTGTTACCTATTTTTCAAATCCGTTTCCCTCTTCTCAGGTGTGATACATGCTTCATTTGTGCTGTACAAAATACTTCTAGAGGAACCTTATGTTTTCAAATTAGTTGTCAAGACTCTTTCCTCTGGTTTATATATAGTAACACCCGTATAGAATAAACCCCTTTTGTGTGTCACTTACTCTTCCTTTTCAATTATCCTGTTTTCTTAGTTCAGTTGTCAGCAACAAGTTAGCCTCTCCAATTTCCAGTCTTGACTCTCCTATTGATGTTATCTCCACCTATTATTTTCTAGACAATAGGTAATTGTGCATTAGATCGTGATTTGAAACTGGATAAGTTATGACATACCTGTAATTCCTACCAAAATTTGATCTTCACACCATTTCCCAATTCAACTTAAACATGTTGCCTCTGGATTCTTCTCACTGGTTTCTAATATGCACTGATGATCATGTAGATAATATTTCCATCCATATGATTTTAGTTCTATTTGGTCTCCTTTAGCCCCTTCAATAATCTCATGATGACACATGTTGACCTGTGCAGGATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATT</gDNA_template>
            <first_frame> S  Q  L  L  P  I  F  Q  I  R  F  P  L  L  R  C  D  T  C  F  I  C  A  V  Q  N  T  S  R  G  T  L  C  F  Q  I  S  C  Q  D  S  F  L  W  F  I  Y  S  N  T  R  I  E  *  T  P  F  V  C  H  L  L  F  L  F  N  Y  P  V  F  L  V  Q  L  S  A  T  S  *  P  L  Q  F  P  V  L  T  L  L  L  M  L  S  P  P  I  I  F  *  T  I  G  N  C  A  L  D  R  D  L  K  L  D  K  L  *  H  T  C  N  S  Y  Q  N  L  I  F  T  P  F  P  N  S  T  *  T  C  C  L  W  I  L  L  T  G  F  *  Y  A  L  M  I  M  *  I  I  F  P  S  I  *  F  *  F  Y  L  V  S  F  S  P  F  N  N  L  M  M  T  H  V  D  L  C  R  M  W  P  N  H  L  I  *  L  S  P  I  L  S  S  S  S  T  W  T  S  K  V  S  R  L  L  D  D  *  G  S  L  T  G  *  C  T  S  L  I  V  K  S  *  G  V  *  G  K  Q  F  A  G  S  T  T  R  *  N  </first_frame>
            <second_frame>  H  S  C  Y  L  F  F  K  S  V  S  L  F  S  G  V  I  H  A  S  F  V  L  Y  K  I  L  L  E  E  P  Y  V  F  K  L  V  V  K  T  L  S  S  G  L  Y  I  V  T  P  V  *  N  K  P  L  L  C  V  T  Y  S  S  F  S  I  I  L  F  S  *  F  S  C  Q  Q  Q  V  S  L  S  N  F  Q  S  *  L  S  Y  *  C  Y  L  H  L  L  F  S  R  Q  *  V  I  V  H  *  I  V  I  *  N  W  I  S  Y  D  I  P  V  I  P  T  K  I  *  S  S  H  H  F  P  I  Q  L  K  H  V  A  S  G  F  F  S  L  V  S  N  M  H  *  *  S  C  R  *  Y  F  H  P  Y  D  F  S  S  I  W  S  P  L  A  P  S  I  I  S  *  *  H  M  L  T  C  A  G  C  G  Q  T  I  S  F  D  F  L  P  F  Y  P  R  V  Q  L  G  L  P  K  F  P  D  Y  L  M  I  K  G  H  L  Q  A  N  V  Q  A  *  S  *  R  A  K  V  Y  K  E  N  S  L  L  V  A  P  L  V  R  I </second_frame>
            <third_frame>   T  V  V  T  Y  F  S  N  P  F  P  S  S  Q  V  *  Y  M  L  H  L  C  C  T  K  Y  F  *  R  N  L  M  F  S  N  *  L  S  R  L  F  P  L  V  Y  I  *  *  H  P  Y  R  I  N  P  F  C  V  S  L  T  L  P  F  Q  L  S  C  F  L  S  S  V  V  S  N  K  L  A  S  P  I  S  S  L  D  S  P  I  D  V  I  S  T  Y  Y  F  L  D  N  R  *  L  C  I  R  S  *  F  E  T  G  *  V  M  T  Y  L  *  F  L  P  K  F  D  L  H  T  I  S  Q  F  N  L  N  M  L  P  L  D  S  S  H  W  F  L  I  C  T  D  D  H  V  D  N  I  S  I  H  M  I  L  V  L  F  G  L  L  *  P  L  Q  *  S  H  D  D  T  C  *  P  V  Q  D  V  A  K  P  S  H  L  T  F  S  H  F  I  L  E  F  N  L  D  F  Q  S  F  Q  I  T  *  *  L  R  V  T  Y  R  L  M  Y  K  L  D  R  K  E  L  R  C  I  R  K  T  V  C  W  *  H  H  S  L  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="92771" e_stop="92835"/>
            <exon e_start="94591" e_stop="95163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.201" acc_prob="0.933" e_score="0.969"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="92771" e_stop="92835" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.201" acc_prob="0.933">
            <gDNA_intron_boundary i_start="92836" i_stop="94590" i_length="1755"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="94591" e_stop="95163" e_length="573"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92771" stop="92835"/>
              <exon start="94591" stop="95163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572044" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGGTTTGTTCTGCTGCTGCTCTTACTCCTAGAAATCTACAGTGGGTCTGTACTATTTCCTCTGT : GATGTGGCCAAACCATCTCATTTGACTTTCTCCCATTTTATCCTCGAGTTCAACTTGGACTTCCAAAGTTTCCAGATTACTTGATGATTAAGGGTCACTTACAGGCTAATGTACAAGCTTGATCGTAAAGAGCTAAGGTGTATAAGGAAAACAGTTTGCTGGTAGCACCACTCGTTAGAATTTAGAAGCATCAACCAGGAGAGAGCATTGGCCCTTGCCATTGACACATTAGCTTTGTGTGCTTCACACTCTATCGTTAAGGCTTGAGTTAACCCAACACTGTACAGATAGAAAAGATAAAAAGAGAGGGACATGTGCAGAAGTCTTTCTTTATAGATTGTACACTTGTTCCTGTCACGTAACATTAGTCAATAATATTTTTAGAGATTTACTGTTTGCTTTCTCTTTTTTCTCGAGTATGACTGCACATTAATTTCTTTGGTACAAGTGTATTGAATCTTAGAAGATTCAAAGTCAGTGCCCCTTGTTTTATAAGTCTTGTATAATTTCCGGCGAATAAACTATCTTTTTTTCTTTTAAAGTAAACCTTGTTCTGCATGCTGTGCCATGATT</gDNA_template>
            <first_frame> V  V  C  S  A  A  A  L  T  P  R  N  L  Q  W  V  C  T  I  S  S  V :   M  W  P  N  H  L  I  *  L  S  P  I  L  S  S  S  S  T  W  T  S  K  V  S  R  L  L  D  D  *  G  S  L  T  G  *  C  T  S  L  I  V  K  S  *  G  V  *  G  K  Q  F  A  G  S  T  T  R  *  N  L  E  A  S  T  R  R  E  H  W  P  L  P  L  T  H  *  L  C  V  L  H  T  L  S  L  R  L  E  L  T  Q  H  C  T  D  R  K  D  K  K  R  G  T  C  A  E  V  F  L  Y  R  L  Y  T  C  S  C  H  V  T  L  V  N  N  I  F  R  D  L  L  F  A  F  S  F  F  S  S  M  T  A  H  *  F  L  W  Y  K  C  I  E  S  *  K  I  Q  S  Q  C  P  L  F  Y  K  S  C  I  I  S  G  E  *  T  I  F  F  S  F  K  V  N  L  V  L  H  A  V  P  *   </first_frame>
            <second_frame>  W  F  V  L  L  L  L  L  L  L  E  I  Y  S  G  S  V  L  F  P  L   : *  C  G  Q  T  I  S  F  D  F  L  P  F  Y  P  R  V  Q  L  G  L  P  K  F  P  D  Y  L  M  I  K  G  H  L  Q  A  N  V  Q  A  *  S  *  R  A  K  V  Y  K  E  N  S  L  L  V  A  P  L  V  R  I  *  K  H  Q  P  G  E  S  I  G  P  C  H  *  H  I  S  F  V  C  F  T  L  Y  R  *  G  L  S  *  P  N  T  V  Q  I  E  K  I  K  R  E  G  H  V  Q  K  S  F  F  I  D  C  T  L  V  P  V  T  *  H  *  S  I  I  F  L  E  I  Y  C  L  L  S  L  F  S  R  V  *  L  H  I  N  F  F  G  T  S  V  L  N  L  R  R  F  K  V  S  A  P  C  F  I  S  L  V  *  F  P  A  N  K  L  S  F  F  L  L  K  *  T  L  F  C  M  L  C  H  D  </second_frame>
            <third_frame>   G  L  F  C  C  C  S  Y  S  *  K  S  T  V  G  L  Y  Y  F  L  C  :  D  V  A  K  P  S  H  L  T  F  S  H  F  I  L  E  F  N  L  D  F  Q  S  F  Q  I  T  *  *  L  R  V  T  Y  R  L  M  Y  K  L  D  R  K  E  L  R  C  I  R  K  T  V  C  W  *  H  H  S  L  E  F  R  S  I  N  Q  E  R  A  L  A  L  A  I  D  T  L  A  L  C  A  S  H  S  I  V  K  A  *  V  N  P  T  L  Y  R  *  K  R  *  K  E  R  D  M  C  R  S  L  S  L  *  I  V  H  L  F  L  S  R  N  I  S  Q  *  Y  F  *  R  F  T  V  C  F  L  F  F  L  E  Y  D  C  T  L  I  S  L  V  Q  V  Y  *  I  L  E  D  S  K  S  V  P  L  V  L  *  V  L  Y  N  F  R  R  I  N  Y  L  F  F  F  *  S  K  P  C  S  A  C  C  A  M  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94823" stop="95023"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCVLHTLSLRLELTQHCTDRKDKKRGTCAEVFLYRLYTCSCHVTLVNNIFRDLLFAFSFFSSMTAH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="101491" PGL_stop="100692"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101491" e_stop="101396"/>
            <exon e_start="101315" e_stop="100692"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101491" e_stop="101396" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="101395" i_stop="101316" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="101315" e_stop="100692" e_length="624"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101491" stop="101396"/>
              <exon start="101315" stop="100692"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563122" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTCGGGCGTGGTTGTAACAATTGGGAAGTATGTCACACCAAATCACATGGATATTAATGGCAATGGAGTTGAACCAGATTTCAGGAATTTTCCTG : CTTGGAATGAAGTCAACAATCGTTTGTCAAAGTGCCACAAACAACAAGATGGATAAGGTAAGGGTTTCTATTTTCTTCTTCTTGTTTCTTTATTAACTTGTGGTTTCTTATCATGGCTCTTTCTGCCACATACAGCTCGCTCGTTTTCCTTTCAGTGTCATTCCGATTCATCATCATGACAGATGAATAACTTGGGGTAGTCCTTCGGTCGTGCAACACTCAGTTTGATATGATATTAACAGATGTTAACCTTCACAGTCGCTTAGCTTCACCCTTAGCCTGAGCATCACCAGGAAGAAACAAAGTACGTAATGCATACTCTTCTATTGCCTAGACATCCTCTTGAAGAACAAATCAGATCGATATCAGCAACTTTAATCTATCAAGATGCAGAACTGGCCATTGGATGATAAAATTAGTAGGCCAGAACCAGCTGAGTTGTGTCATTGTATTTATTTTACTGATAGCAGGTGCCTATGGATGATAGTAGCACAAGTTTTGGACATAAATAACTAGCAATTTACCTGATACAACCAACAGTTCATATTGTACACACATTTTGAGTAAATGTAAATCAATTTGCGCCTCATTTTGATGTTCCCTAATAAGATGTACTTCTGTATG</gDNA_template>
            <first_frame> G  R  A  W  L  *  Q  L  G  S  M  S  H  Q  I  T  W  I  L  M  A  M  E  L  N  Q  I  S  G  I  F  L  :  L  G  M  K  S  T  I  V  C  Q  S  A  T  N  N  K  M  D  K  V  R  V  S  I  F  F  F  L  F  L  Y  *  L  V  V  S  Y  H  G  S  F  C  H  I  Q  L  A  R  F  P  F  S  V  I  P  I  H  H  H  D  R  *  I  T  W  G  S  P  S  V  V  Q  H  S  V  *  Y  D  I  N  R  C  *  P  S  Q  S  L  S  F  T  L  S  L  S  I  T  R  K  K  Q  S  T  *  C  I  L  F  Y  C  L  D  I  L  L  K  N  K  S  D  R  Y  Q  Q  L  *  S  I  K  M  Q  N  W  P  L  D  D  K  I  S  R  P  E  P  A  E  L  C  H  C  I  Y  F  T  D  S  R  C  L  W  M  I  V  A  Q  V  L  D  I  N  N  *  Q  F  T  *  Y  N  Q  Q  F  I  L  Y  T  H  F  E  *  M  *  I  N  L  R  L  I  L  M  F  P  N  K  M  Y  F  C  M </first_frame>
            <second_frame>  V  G  R  G  C  N  N  W  E  V  C  H  T  K  S  H  G  Y  *  W  Q  W  S  *  T  R  F  Q  E  F  S  C :   L  E  *  S  Q  Q  S  F  V  K  V  P  Q  T  T  R  W  I  R  *  G  F  L  F  S  S  S  C  F  F  I  N  L  W  F  L  I  M  A  L  S  A  T  Y  S  S  L  V  F  L  S  V  S  F  R  F  I  I  M  T  D  E  *  L  G  V  V  L  R  S  C  N  T  Q  F  D  M  I  L  T  D  V  N  L  H  S  R  L  A  S  P  L  A  *  A  S  P  G  R  N  K  V  R  N  A  Y  S  S  I  A  *  T  S  S  *  R  T  N  Q  I  D  I  S  N  F  N  L  S  R  C  R  T  G  H  W  M  I  K  L  V  G  Q  N  Q  L  S  C  V  I  V  F  I  L  L  I  A  G  A  Y  G  *  *  *  H  K  F  W  T  *  I  T  S  N  L  P  D  T  T  N  S  S  Y  C  T  H  I  L  S  K  C  K  S  I  C  A  S  F  *  C  S  L  I  R  C  T  S  V   </second_frame>
            <third_frame>   S  G  V  V  V  T  I  G  K  Y  V  T  P  N  H  M  D  I  N  G  N  G  V  E  P  D  F  R  N  F  P   : A  W  N  E  V  N  N  R  L  S  K  C  H  K  Q  Q  D  G  *  G  K  G  F  Y  F  L  L  L  V  S  L  L  T  C  G  F  L  S  W  L  F  L  P  H  T  A  R  S  F  S  F  Q  C  H  S  D  S  S  S  *  Q  M  N  N  L  G  *  S  F  G  R  A  T  L  S  L  I  *  Y  *  Q  M  L  T  F  T  V  A  *  L  H  P  *  P  E  H  H  Q  E  E  T  K  Y  V  M  H  T  L  L  L  P  R  H  P  L  E  E  Q  I  R  S  I  S  A  T  L  I  Y  Q  D  A  E  L  A  I  G  *  *  N  *  *  A  R  T  S  *  V  V  S  L  Y  L  F  Y  *  *  Q  V  P  M  D  D  S  S  T  S  F  G  H  K  *  L  A  I  Y  L  I  Q  P  T  V  H  I  V  H  T  F  *  V  N  V  N  Q  F  A  P  H  F  D  V  P  *  *  D  V  L  L  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0066C13.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="108839" PGL_stop="105629"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108839" e_stop="108686"/>
            <exon e_start="107278" e_stop="107159"/>
            <exon e_start="106472" e_stop="106344"/>
            <exon e_start="105691" e_stop="105629"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.933" e_score="0.929"/>
          <exon-intron don_prob="0.999" acc_prob="0.078" e_score="0.983"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.969"/>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="108839" e_stop="108686" e_length="154"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.933">
            <gDNA_intron_boundary i_start="108685" i_stop="107279" i_length="1407"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="107278" e_stop="107159" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.078">
            <gDNA_intron_boundary i_start="107158" i_stop="106473" i_length="686"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="106472" e_stop="106344" e_length="129"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="106343" i_stop="105692" i_length="652"/>
          </intron>
          <exon e_serial="4" e_score="0.937">
            <gDNA_exon_boundary e_start="105691" e_stop="105629" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108839" stop="108686"/>
              <exon start="107278" stop="107159"/>
              <exon start="106472" stop="106344"/>
              <exon start="105691" stop="105629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563089" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCGAGAGAACGAGGGGGAGGAGGTGTATGAGAAAGACACTGAAGTATCCAAAGTGGTGAGCAATGAAAACATTGTGGAAGAAGCTTGGCAGATTGTCAATGACAGCTTTCTTAACACCAGCGATCGTCGTTCTTGGTCTCCTGAATCGTGGCTT : CAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGGTCAAAAGCACATGATATCATCAAGCGTATGTTGGCTAGCTTGGGTGACCCCTATACACGGTTTCTTTCTCCTGAACAG : ATGGCTAGATATGATATGACTGGGATTGGAGTTAACCTCAGGGATGTTCCAGATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTATTGGATGGCCCTGCCCATAATGCCGGTGTACGACAG : GGAGATGAACTGATATCTGTGAATGGGGTGGATGTGCTGGGTAAATCTTCCTTTGAAGCATCT</gDNA_template>
            <first_frame> P  R  E  R  G  G  G  G  V  *  E  R  H  *  S  I  Q  S  G  E  Q  *  K  H  C  G  R  S  L  A  D  C  Q  *  Q  L  S  *  H  Q  R  S  S  F  L  V  S  *  I  V  A   : S  K  E  R  *  H  L  K  F  I  N  S  D  K  V  K  S  T  *  Y  H  Q  A  Y  V  G  *  L  G  *  P  L  Y  T  V  S  F  S  *  T   : D  G  *  I  *  Y  D  W  D  W  S  *  P  Q  G  C  S  R  W  Q  W  R  F  K  T  E  G  F  R  A  P  I  G  W  P  C  P  *  C  R  C  T  T   : G  R  *  T  D  I  C  E  W  G  G  C  A  G  *  I  F  L  *  S  I  </first_frame>
            <second_frame>  R  E  N  E  G  E  E  V  Y  E  K  D  T  E  V  S  K  V  V  S  N  E  N  I  V  E  E  A  W  Q  I  V  N  D  S  F  L  N  T  S  D  R  R  S  W  S  P  E  S  W  L  :  Q  K  K  D  D  I  L  S  S  S  I  Q  T  R  S  K  A  H  D  I  I  K  R  M  L  A  S  L  G  D  P  Y  T  R  F  L  S  P  E  Q  :  M  A  R  Y  D  M  T  G  I  G  V  N  L  R  D  V  P  D  G  N  G  G  S  K  L  K  V  L  G  L  L  L  D  G  P  A  H  N  A  G  V  R  Q  :  G  D  E  L  I  S  V  N  G  V  D  V  L  G  K  S  S  F  E  A  S </second_frame>
            <third_frame>   E  R  T  R  G  R  R  C  M  R  K  T  L  K  Y  P  K  W  *  A  M  K  T  L  W  K  K  L  G  R  L  S  M  T  A  F  L  T  P  A  I  V  V  L  G  L  L  N  R  G  F :   K  R  K  M  T  S  *  V  H  Q  F  R  Q  G  Q  K  H  M  I  S  S  S  V  C  W  L  A  W  V  T  P  I  H  G  F  F  L  L  N  R :   W  L  D  M  I  *  L  G  L  E  L  T  S  G  M  F  Q  M  A  M  E  V  Q  N  *  R  F  *  G  S  Y  W  M  A  L  P  I  M  P  V  Y  D  R :   E  M  N  *  Y  L  *  M  G  W  M  C  W  V  N  L  P  L  K  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108838" stop="108686"/>
                    <exon start="107278" stop="107159"/>
                    <exon start="106472" stop="106344"/>
                    <exon start="105691" stop="105629"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RENEGEEVYEKDTEVSKVVSNENIVEEAWQIVNDSFLNTSDRRSWSPESWLQKKDDILSSSIQTRSKAHDIIKRMLASLGDPYTRFLSPEQMARYDMTGIGVNLRDVPDGNGGSKLKVLGLLLDGPAHNAGVRQGDELISVNGVDVLGKSSFEAS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="111732" PGL_stop="120079"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111732" e_stop="112114"/>
            <exon e_start="112975" e_stop="113018"/>
            <exon e_start="113506" e_stop="113605"/>
            <exon e_start="113718" e_stop="113829"/>
            <exon e_start="114419" e_stop="115032"/>
            <exon e_start="116099" e_stop="116381"/>
            <exon e_start="117069" e_stop="117339"/>
            <exon e_start="117752" e_stop="117913"/>
            <exon e_start="118803" e_stop="119258"/>
            <exon e_start="119526" e_stop="120079"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.963" e_score="0.997"/>
          <exon-intron don_prob="0.720" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.484" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="0.994"/>
          <exon-intron don_prob="0.989" acc_prob="0.741" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="111732" e_stop="112114" e_length="383"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.963">
            <gDNA_intron_boundary i_start="112115" i_stop="112974" i_length="860"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="112975" e_stop="113018" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.720" acc_prob="0.993">
            <gDNA_intron_boundary i_start="113019" i_stop="113505" i_length="487"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="113506" e_stop="113605" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.484">
            <gDNA_intron_boundary i_start="113606" i_stop="113717" i_length="112"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="113718" e_stop="113829" e_length="112"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="113830" i_stop="114418" i_length="589"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="114419" e_stop="115032" e_length="614"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="115033" i_stop="116098" i_length="1066"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="116099" e_stop="116381" e_length="283"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="116382" i_stop="117068" i_length="687"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="117069" e_stop="117339" e_length="271"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.951">
            <gDNA_intron_boundary i_start="117340" i_stop="117751" i_length="412"/>
          </intron>
          <exon e_serial="8" e_score="0.994">
            <gDNA_exon_boundary e_start="117752" e_stop="117913" e_length="162"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="117914" i_stop="118802" i_length="889"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="118803" e_stop="119258" e_length="456"/>
          </exon>
          <intron i_serial="9" don_prob="0.989" acc_prob="0.741">
            <gDNA_intron_boundary i_start="119259" i_stop="119525" i_length="267"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="119526" e_stop="120079" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111732" stop="112114"/>
              <exon start="112975" stop="113018"/>
              <exon start="113506" stop="113605"/>
              <exon start="113718" stop="113829"/>
              <exon start="114419" stop="115032"/>
              <exon start="116099" stop="116381"/>
              <exon start="117069" stop="117339"/>
              <exon start="117752" stop="117913"/>
              <exon start="118803" stop="119258"/>
              <exon start="119526" stop="120079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565380" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAGAAGAAGAGAAGCAGCAGCAGCAAAAGCAAAAACCCCTTCATTCTGTGCGTTATTTTTCATAATAAAACTGAGATAAATATACAGAGTTGAGGAGACCCAAAAAACCCTAAACTATAACAGATCTGAAACAAGAAAATATTTTGTGGGTCTTTCTTGTTTTTTTCCTCTCTTTTTTTTTAGAGAAAAAGAGTTGTCTTCTTCAAAGATGAGTAGCAGAAACAATGGTGGAGTTGGGGTACAATCGATACCCGCAGGGTCAAGAAAGATGGTACAAAGCTTAAAGGAGATAGTTAACTGTCCTGAACCTGAGATCTATGCTATGCTCAAAGAATGTAATATGGACCCCAATGAAGCTGTCAATAGGCTTCTTACTCAAG : ATACTTTTCATGAGGTGAAGAGCAAACGTGAAAAGAGAAAAGAG : AGTAAGGATACGACTGAATCTAGGCCACGTGGTGCAATTAGCAACTCAGGCCGTGGTAGCAGGGGAGGTGCAGAACGATATGTTGGGCGCGGTGGGTCAG : CCGAGTCTACCAAGCTTATTCCTGGATACAGAAAAGATAATGGATCAAAGACGAGTAACCTGACTTCTACTCTAGGAGTTTCCGGAATAAGCAGGAGGGCCACAACAATCAG : TGATATTGCTGCAAATGAAAGTAAAAAGTCAGCACCTGCAGCAGTTGATGGTGTTTCATCAGTCTCACAGCATGAGACTTCTTCTGGATATCAACCTACTTGGGGTGGGGTGCCCGGTCAAGTTTCCATGGCTGATATTGTGAAGATGGGTAGGCCACAGAGCAAAGTGCCAAGTGCACCTAGTGTATCTCACCACAATGTCAATGCCGAGCAAAACCATATTCAGGGGCTCCCTTCTGGTGCATCACATCAAAATACTCAGTGGTCTGATGATCATACTACCAAAATTTCTGAGGTACACCGAGAGCCACAACATCTTTCAACTGATGAGGAATGGCCTCTAATTGAGCCGCCATCAGTTGCTAGTCAGACATCTATCTCAGAGCCTCCTGCTGATTCGGAGCTGCATCCTGATCCAACTAACATGTCATATGACAGAATTAATCATCAAAATGAGATTGATGAAGTTCAGGGGACAGATAACTGCACGATTGAAAATCTTGGTAGTCCTTCAAGCAGAAGGTTGCAGGAGGATAATGCTGGAGGTGCATCTATTTATGAGAATGACCTCTACGGATATCAGAACCAGAATCATACCTTTGACCATCAACAAG : CTGAGGATGTTAACAACTCTGTTTCATCAGTTTCTGCAAACTTGCAACAGTTAAATGTACAAGATGATGGAGGGGTGCCACCTGAGGGAGATGGTCCTTCTGTTGTAATACCAGACCATCTTCAAGTTCAAACTGCAGACTGCTCACACCTGAGCTTTGGTAGCTTTGGCTCTGGTATTGGTGGCTCCTTTTCTGGGCCTTTGGCATCTGCTCCAGTGACTAGTACTTTGGAAGATGCACCTAAGGAAGTGGATGGTTCATCAGTTGGGCACTTGGGATCCAG : AGCTTCAGAATACTATGGTGATGAGTCTCTCAGACATGCATCTGAGAGTAACTTATACCATAGAACTAATGCAAGTTCTGTAAATTACGATTCACCTGCTTCACAACCAGAACCTTTGAAATCAGAAACAAATGAACAAGGAAATCAATATTCGTATCCCTCTTCTGCTGCTGGCTACACATATGAAAGTGCACAACAATTAACTGCAGCATTTAGTCAGCCACAGACAAGTTCCCAGATGCAAAATCTCACTCCTTTCTCTAATGTAATG : GCTTTCACAAATTCATTGCCTAGCACCTTGTTGGCTGCTAATGCTCATGCTGGTCGTGAAACTGATCTTTCATACTTACCTTTTTCTGCAACACAAGCAATGGCTATGAAATATGGCAGCTCTGTTTCTTCAATTGGTGGTTCAACAATTTCCATGCCTGAG : TCTTTGAAGGGTGCTGGTTTTCCATCAGCACAGCCTACACAGCAGCCACTTTCTGGAACTAGTGTCACCACTGGACCTACTGTGCCGCAACATCTTGCTGTGCATCCATATAACCAACCACCTCTGGGACCATTTGCTAACATGATAGGTTATCCCTTTTTGCCTCAGAGTTATACATATATGCCATCTGCATTCCAGCAACCATTTGCTGGTAACAGTAATTATCATCAGTCACTGGCGGCGGTGCTTCCTCAATATAAGAACAGTGTGTCAGTCAGCAGCTTACCTCAGCCAGCCAGTGTTGCTTCTGCGTATGGTGGTTTTGGAAATACAGCAAGTATCCCTGGTAACTTCCCAATGAATCCCCCTGCTGCTCCCTCTGGTACTAACTTGAGTTACGATGATGTGTTGAGCTCTCAGTACAAGGATACCAATCATTTAATGTCTCTTCAGCAG : AGCGAGAACTCAGCTATGTGGCATGGACCCGGTTCAAGGACAATGTCAGCTGTTCCTGCTAACACATATTATGGTTTTCAAGGTCAAAACCAGCAAAGTAGTGGATTTAGGCAAGCTCAACAGCCGCTGCAAAATCATGGATCCTTGGGGTACCCAAATTTCTACCATTCTCAGGCGGGGATCTCATTAGAACATCAACAACAAAATCCGAGGGATGGGTCATTGGGTGGTGGATCTCAAGGCCAGCCAAAGCAGTTTCAACAGCTATGGCAAAGTGGCGGCTACTAATCTCTTACTGCCTCCTTCTTTTTTGGAGTCTTGTAATGAGTGTGAAAGTGGCTATAGGGTGTTGCTTTGGAAGCAACTAGAATGCACAATCAATTGGATGCTTACCTGTGCCTCAAGGTTGTACTTTACATGTTTGTCATCAGTCAAATGTAACGTAGGATGTGAGCTAACGTCGTGCTAGTGGACTTGTCTTCTGTTTCATCAACTCTTTGTTACACAGTTAACCCCATGGTTTCTTTATTAATAGTGAGAAGTGTTCTGTCTCC</gDNA_template>
            <first_frame> R  K  K  K  R  S  S  S  S  K  S  K  N  P  F  I  L  C  V  I  F  H  N  K  T  E  I  N  I  Q  S  *  G  D  P  K  N  P  K  L  *  Q  I  *  N  K  K  I  F  C  G  S  F  L  F  F  S  S  L  F  F  *  R  K  R  V  V  F  F  K  D  E  *  Q  K  Q  W  W  S  W  G  T  I  D  T  R  R  V  K  K  D  G  T  K  L  K  G  D  S  *  L  S  *  T  *  D  L  C  Y  A  Q  R  M  *  Y  G  P  Q  *  S  C  Q  *  A  S  Y  S  R :   Y  F  S  *  G  E  E  Q  T  *  K  E  K  R   : E  *  G  Y  D  *  I  *  A  T  W  C  N  *  Q  L  R  P  W  *  Q  G  R  C  R  T  I  C  W  A  R  W  V  S :   R  V  Y  Q  A  Y  S  W  I  Q  K  R  *  W  I  K  D  E  *  P  D  F  Y  S  R  S  F  R  N  K  Q  E  G  H  N  N  Q  :  *  Y  C  C  K  *  K  *  K  V  S  T  C  S  S  *  W  C  F  I  S  L  T  A  *  D  F  F  W  I  S  T  Y  L  G  W  G  A  R  S  S  F  H  G  *  Y  C  E  D  G  *  A  T  E  Q  S  A  K  C  T  *  C  I  S  P  Q  C  Q  C  R  A  K  P  Y  S  G  A  P  F  W  C  I  T  S  K  Y  S  V  V  *  *  S  Y  Y  Q  N  F  *  G  T  P  R  A  T  T  S  F  N  *  *  G  M  A  S  N  *  A  A  I  S  C  *  S  D  I  Y  L  R  A  S  C  *  F  G  A  A  S  *  S  N  *  H  V  I  *  Q  N  *  S  S  K  *  D  *  *  S  S  G  D  R  *  L  H  D  *  K  S  W  *  S  F  K  Q  K  V  A  G  G  *  C  W  R  C  I  Y  L  *  E  *  P  L  R  I  S  E  P  E  S  Y  L  *  P  S  T  S :   *  G  C  *  Q  L  C  F  I  S  F  C  K  L  A  T  V  K  C  T  R  *  W  R  G  A  T  *  G  R  W  S  F  C  C  N  T  R  P  S  S  S  S  N  C  R  L  L  T  P  E  L  W  *  L  W  L  W  Y  W  W  L  L  F  W  A  F  G  I  C  S  S  D  *  Y  F  G  R  C  T  *  G  S  G  W  F  I  S  W  A  L  G  I  Q  :  S  F  R  I  L  W  *  *  V  S  Q  T  C  I  *  E  *  L  I  P  *  N  *  C  K  F  C  K  L  R  F  T  C  F  T  T  R  T  F  E  I  R  N  K  *  T  R  K  S  I  F  V  S  L  F  C  C  W  L  H  I  *  K  C  T  T  I  N  C  S  I  *  S  A  T  D  K  F  P  D  A  K  S  H  S  F  L  *  C  N   : G  F  H  K  F  I  A  *  H  L  V  G  C  *  C  S  C  W  S  *  N  *  S  F  I  L  T  F  F  C  N  T  S  N  G  Y  E  I  W  Q  L  C  F  F  N  W  W  F  N  N  F  H  A  *   : V  F  E  G  C  W  F  S  I  S  T  A  Y  T  A  A  T  F  W  N  *  C  H  H  W  T  Y  C  A  A  T  S  C  C  A  S  I  *  P  T  T  S  G  T  I  C  *  H  D  R  L  S  L  F  A  S  E  L  Y  I  Y  A  I  C  I  P  A  T  I  C  W  *  Q  *  L  S  S  V  T  G  G  G  A  S  S  I  *  E  Q  C  V  S  Q  Q  L  T  S  A  S  Q  C  C  F  C  V  W  W  F  W  K  Y  S  K  Y  P  W  *  L  P  N  E  S  P  C  C  S  L  W  Y  *  L  E  L  R  *  C  V  E  L  S  V  Q  G  Y  Q  S  F  N  V  S  S  A   : E  R  E  L  S  Y  V  A  W  T  R  F  K  D  N  V  S  C  S  C  *  H  I  L  W  F  S  R  S  K  P  A  K  *  W  I  *  A  S  S  T  A  A  A  K  S  W  I  L  G  V  P  K  F  L  P  F  S  G  G  D  L  I  R  T  S  T  T  K  S  E  G  W  V  I  G  W  W  I  S  R  P  A  K  A  V  S  T  A  M  A  K  W  R  L  L  I  S  Y  C  L  L  L  F  W  S  L  V  M  S  V  K  V  A  I  G  C  C  F  G  S  N  *  N  A  Q  S  I  G  C  L  P  V  P  Q  G  C  T  L  H  V  C  H  Q  S  N  V  T  *  D  V  S  *  R  R  A  S  G  L  V  F  C  F  I  N  S  L  L  H  S  *  P  H  G  F  F  I  N  S  E  K  C  S  V  S </first_frame>
            <second_frame>  G  R  R  R  E  A  A  A  A  K  A  K  T  P  S  F  C  A  L  F  F  I  I  K  L  R  *  I  Y  R  V  E  E  T  Q  K  T  L  N  Y  N  R  S  E  T  R  K  Y  F  V  G  L  S  C  F  F  P  L  F  F  F  R  E  K  E  L  S  S  S  K  M  S  S  R  N  N  G  G  V  G  V  Q  S  I  P  A  G  S  R  K  M  V  Q  S  L  K  E  I  V  N  C  P  E  P  E  I  Y  A  M  L  K  E  C  N  M  D  P  N  E  A  V  N  R  L  L  T  Q   : D  T  F  H  E  V  K  S  K  R  E  K  R  K  E  :  S  K  D  T  T  E  S  R  P  R  G  A  I  S  N  S  G  R  G  S  R  G  G  A  E  R  Y  V  G  R  G  G  S   : A  E  S  T  K  L  I  P  G  Y  R  K  D  N  G  S  K  T  S  N  L  T  S  T  L  G  V  S  G  I  S  R  R  A  T  T  I  S :   D  I  A  A  N  E  S  K  K  S  A  P  A  A  V  D  G  V  S  S  V  S  Q  H  E  T  S  S  G  Y  Q  P  T  W  G  G  V  P  G  Q  V  S  M  A  D  I  V  K  M  G  R  P  Q  S  K  V  P  S  A  P  S  V  S  H  H  N  V  N  A  E  Q  N  H  I  Q  G  L  P  S  G  A  S  H  Q  N  T  Q  W  S  D  D  H  T  T  K  I  S  E  V  H  R  E  P  Q  H  L  S  T  D  E  E  W  P  L  I  E  P  P  S  V  A  S  Q  T  S  I  S  E  P  P  A  D  S  E  L  H  P  D  P  T  N  M  S  Y  D  R  I  N  H  Q  N  E  I  D  E  V  Q  G  T  D  N  C  T  I  E  N  L  G  S  P  S  S  R  R  L  Q  E  D  N  A  G  G  A  S  I  Y  E  N  D  L  Y  G  Y  Q  N  Q  N  H  T  F  D  H  Q  Q   : A  E  D  V  N  N  S  V  S  S  V  S  A  N  L  Q  Q  L  N  V  Q  D  D  G  G  V  P  P  E  G  D  G  P  S  V  V  I  P  D  H  L  Q  V  Q  T  A  D  C  S  H  L  S  F  G  S  F  G  S  G  I  G  G  S  F  S  G  P  L  A  S  A  P  V  T  S  T  L  E  D  A  P  K  E  V  D  G  S  S  V  G  H  L  G  S  R :   A  S  E  Y  Y  G  D  E  S  L  R  H  A  S  E  S  N  L  Y  H  R  T  N  A  S  S  V  N  Y  D  S  P  A  S  Q  P  E  P  L  K  S  E  T  N  E  Q  G  N  Q  Y  S  Y  P  S  S  A  A  G  Y  T  Y  E  S  A  Q  Q  L  T  A  A  F  S  Q  P  Q  T  S  S  Q  M  Q  N  L  T  P  F  S  N  V  M  :  A  F  T  N  S  L  P  S  T  L  L  A  A  N  A  H  A  G  R  E  T  D  L  S  Y  L  P  F  S  A  T  Q  A  M  A  M  K  Y  G  S  S  V  S  S  I  G  G  S  T  I  S  M  P  E  :  S  L  K  G  A  G  F  P  S  A  Q  P  T  Q  Q  P  L  S  G  T  S  V  T  T  G  P  T  V  P  Q  H  L  A  V  H  P  Y  N  Q  P  P  L  G  P  F  A  N  M  I  G  Y  P  F  L  P  Q  S  Y  T  Y  M  P  S  A  F  Q  Q  P  F  A  G  N  S  N  Y  H  Q  S  L  A  A  V  L  P  Q  Y  K  N  S  V  S  V  S  S  L  P  Q  P  A  S  V  A  S  A  Y  G  G  F  G  N  T  A  S  I  P  G  N  F  P  M  N  P  P  A  A  P  S  G  T  N  L  S  Y  D  D  V  L  S  S  Q  Y  K  D  T  N  H  L  M  S  L  Q  Q  :  S  E  N  S  A  M  W  H  G  P  G  S  R  T  M  S  A  V  P  A  N  T  Y  Y  G  F  Q  G  Q  N  Q  Q  S  S  G  F  R  Q  A  Q  Q  P  L  Q  N  H  G  S  L  G  Y  P  N  F  Y  H  S  Q  A  G  I  S  L  E  H  Q  Q  Q  N  P  R  D  G  S  L  G  G  G  S  Q  G  Q  P  K  Q  F  Q  Q  L  W  Q  S  G  G  Y  *  S  L  T  A  S  F  F  F  G  V  L  *  *  V  *  K  W  L  *  G  V  A  L  E  A  T  R  M  H  N  Q  L  D  A  Y  L  C  L  K  V  V  L  Y  M  F  V  I  S  Q  M  *  R  R  M  *  A  N  V  V  L  V  D  L  S  S  V  S  S  T  L  C  Y  T  V  N  P  M  V  S  L  L  I  V  R  S  V  L  S   </second_frame>
            <third_frame>   E  E  E  E  K  Q  Q  Q  Q  K  Q  K  P  L  H  S  V  R  Y  F  S  *  *  N  *  D  K  Y  T  E  L  R  R  P  K  K  P  *  T  I  T  D  L  K  Q  E  N  I  L  W  V  F  L  V  F  F  L  S  F  F  L  E  K  K  S  C  L  L  Q  R  *  V  A  E  T  M  V  E  L  G  Y  N  R  Y  P  Q  G  Q  E  R  W  Y  K  A  *  R  R  *  L  T  V  L  N  L  R  S  M  L  C  S  K  N  V  I  W  T  P  M  K  L  S  I  G  F  L  L  K  :  I  L  F  M  R  *  R  A  N  V  K  R  E  K  R :   V  R  I  R  L  N  L  G  H  V  V  Q  L  A  T  Q  A  V  V  A  G  E  V  Q  N  D  M  L  G  A  V  G  Q  :  P  S  L  P  S  L  F  L  D  T  E  K  I  M  D  Q  R  R  V  T  *  L  L  L  *  E  F  P  E  *  A  G  G  P  Q  Q  S   : V  I  L  L  Q  M  K  V  K  S  Q  H  L  Q  Q  L  M  V  F  H  Q  S  H  S  M  R  L  L  L  D  I  N  L  L  G  V  G  C  P  V  K  F  P  W  L  I  L  *  R  W  V  G  H  R  A  K  C  Q  V  H  L  V  Y  L  T  T  M  S  M  P  S  K  T  I  F  R  G  S  L  L  V  H  H  I  K  I  L  S  G  L  M  I  I  L  P  K  F  L  R  Y  T  E  S  H  N  I  F  Q  L  M  R  N  G  L  *  L  S  R  H  Q  L  L  V  R  H  L  S  Q  S  L  L  L  I  R  S  C  I  L  I  Q  L  T  C  H  M  T  E  L  I  I  K  M  R  L  M  K  F  R  G  Q  I  T  A  R  L  K  I  L  V  V  L  Q  A  E  G  C  R  R  I  M  L  E  V  H  L  F  M  R  M  T  S  T  D  I  R  T  R  I  I  P  L  T  I  N  K  :  L  R  M  L  T  T  L  F  H  Q  F  L  Q  T  C  N  S  *  M  Y  K  M  M  E  G  C  H  L  R  E  M  V  L  L  L  *  Y  Q  T  I  F  K  F  K  L  Q  T  A  H  T  *  A  L  V  A  L  A  L  V  L  V  A  P  F  L  G  L  W  H  L  L  Q  *  L  V  L  W  K  M  H  L  R  K  W  M  V  H  Q  L  G  T  W  D  P   : E  L  Q  N  T  M  V  M  S  L  S  D  M  H  L  R  V  T  Y  T  I  E  L  M  Q  V  L  *  I  T  I  H  L  L  H  N  Q  N  L  *  N  Q  K  Q  M  N  K  E  I  N  I  R  I  P  L  L  L  L  A  T  H  M  K  V  H  N  N  *  L  Q  H  L  V  S  H  R  Q  V  P  R  C  K  I  S  L  L  S  L  M  *  W :   L  S  Q  I  H  C  L  A  P  C  W  L  L  M  L  M  L  V  V  K  L  I  F  H  T  Y  L  F  L  Q  H  K  Q  W  L  *  N  M  A  A  L  F  L  Q  L  V  V  Q  Q  F  P  C  L  S :   L  *  R  V  L  V  F  H  Q  H  S  L  H  S  S  H  F  L  E  L  V  S  P  L  D  L  L  C  R  N  I  L  L  C  I  H  I  T  N  H  L  W  D  H  L  L  T  *  *  V  I  P  F  C  L  R  V  I  H  I  C  H  L  H  S  S  N  H  L  L  V  T  V  I  I  I  S  H  W  R  R  C  F  L  N  I  R  T  V  C  Q  S  A  A  Y  L  S  Q  P  V  L  L  L  R  M  V  V  L  E  I  Q  Q  V  S  L  V  T  S  Q  *  I  P  L  L  L  P  L  V  L  T  *  V  T  M  M  C  *  A  L  S  T  R  I  P  I  I  *  C  L  F  S  R :   A  R  T  Q  L  C  G  M  D  P  V  Q  G  Q  C  Q  L  F  L  L  T  H  I  M  V  F  K  V  K  T  S  K  V  V  D  L  G  K  L  N  S  R  C  K  I  M  D  P  W  G  T  Q  I  S  T  I  L  R  R  G  S  H  *  N  I  N  N  K  I  R  G  M  G  H  W  V  V  D  L  K  A  S  Q  S  S  F  N  S  Y  G  K  V  A  A  T  N  L  L  L  P  P  S  F  L  E  S  C  N  E  C  E  S  G  Y  R  V  L  L  W  K  Q  L  E  C  T  I  N  W  M  L  T  C  A  S  R  L  Y  F  T  C  L  S  S  V  K  C  N  V  G  C  E  L  T  S  C  *  W  T  C  L  L  F  H  Q  L  F  V  T  Q  L  T  P  W  F  L  Y  *  *  *  E  V  F  C  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111814" stop="112114"/>
                    <exon start="112975" stop="113018"/>
                    <exon start="113506" stop="113605"/>
                    <exon start="113718" stop="113829"/>
                    <exon start="114419" stop="115032"/>
                    <exon start="116099" stop="116381"/>
                    <exon start="117069" stop="117339"/>
                    <exon start="117752" stop="117913"/>
                    <exon start="118803" stop="119258"/>
                    <exon start="119526" stop="119813"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2628</number_coding_nucleotides>
                  <number_encoded_amino_acids>876</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYRVEETQKTLNYNRSETRKYFVGLSCFFPLFFFREKELSSSKMSSRNNGGVGVQSIPAGSRKMVQSLKEIVNCPEPEIYAMLKECNMDPNEAVNRLLTQDTFHEVKSKREKRKESKDTTESRPRGAISNSGRGSRGGAERYVGRGGSAESTKLIPGYRKDNGSKTSNLTSTLGVSGISRRATTISDIAANESKKSAPAAVDGVSSVSQHETSSGYQPTWGGVPGQVSMADIVKMGRPQSKVPSAPSVSHHNVNAEQNHIQGLPSGASHQNTQWSDDHTTKISEVHREPQHLSTDEEWPLIEPPSVASQTSISEPPADSELHPDPTNMSYDRINHQNEIDEVQGTDNCTIENLGSPSSRRLQEDNAGGASIYENDLYGYQNQNHTFDHQQAEDVNNSVSSVSANLQQLNVQDDGGVPPEGDGPSVVIPDHLQVQTADCSHLSFGSFGSGIGGSFSGPLASAPVTSTLEDAPKEVDGSSVGHLGSRASEYYGDESLRHASESNLYHRTNASSVNYDSPASQPEPLKSETNEQGNQYSYPSSAAGYTYESAQQLTAAFSQPQTSSQMQNLTPFSNVMAFTNSLPSTLLAANAHAGRETDLSYLPFSATQAMAMKYGSSVSSIGGSTISMPESLKGAGFPSAQPTQQPLSGTSVTTGPTVPQHLAVHPYNQPPLGPFANMIGYPFLPQSYTYMPSAFQQPFAGNSNYHQSLAAVLPQYKNSVSVSSLPQPASVASAYGGFGNTASIPGNFPMNPPAAPSGTNLSYDDVLSSQYKDTNHLMSLQQSENSAMWHGPGSRTMSAVPANTYYGFQGQNQQSSGFRQAQQPLQNHGSLGYPNFYHSQAGISLEHQQQNPRDGSLGGGSQGQPKQFQQLWQSGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="125022" PGL_stop="120847"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125022" e_stop="124907"/>
            <exon e_start="123875" e_stop="123716"/>
            <exon e_start="123205" e_stop="123058"/>
            <exon e_start="122962" e_stop="122885"/>
            <exon e_start="121225" e_stop="121141"/>
            <exon e_start="121008" e_stop="120847"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.912" e_score="0.974"/>
          <exon-intron don_prob="1.000" acc_prob="0.777" e_score="1.000"/>
          <exon-intron don_prob="0.872" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="125022" e_stop="124907" e_length="116"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.912">
            <gDNA_intron_boundary i_start="124906" i_stop="123876" i_length="1031"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="123875" e_stop="123716" e_length="160"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.777">
            <gDNA_intron_boundary i_start="123715" i_stop="123206" i_length="510"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="123205" e_stop="123058" e_length="148"/>
          </exon>
          <intron i_serial="3" don_prob="0.872" acc_prob="0.968">
            <gDNA_intron_boundary i_start="123057" i_stop="122963" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122962" e_stop="122885" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="122884" i_stop="121226" i_length="1659"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="121225" e_stop="121141" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="121140" i_stop="121009" i_length="132"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="121008" e_stop="120847" e_length="162"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125022" stop="124907"/>
              <exon start="123875" stop="123716"/>
              <exon start="123205" stop="123058"/>
              <exon start="122962" stop="122885"/>
              <exon start="121225" stop="121141"/>
              <exon start="121008" stop="120847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572530" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCGTGCTTTACGGACCCAGCAAATAGGCTCTTCTCCTCCCTTCTCTACGGCGTGCAATTCTGGTGTGTCCGTAGGTCGTGCGATCCGCCATTTTCAACCTCAATTCACCAACAATG : GAGATCTGCCCTTCAATTAAGAACATTCTGCTTCTAGATTCCGAAGGAAAGCGTGTTGCTGTAAACTACTACTCAGATGATTGGCCAACAAATGCTGCAAAGGAAGCTTTTGAGAAGGCCGTGTTTGCCAAGACTCAAAAGACAAATGCTAGGGCAGAAG : CGGAGATTACAATGTTTGATAATTATATTGTTGTCTACAAGTTTGCTCAAGATCTTCATTTCTTTGTTACTGGGAGTGACAATGAAAATGAAATAATCCTTGCCAGTGTTCTCCAAGGATTCTTTGATGCTGTTGGTATTCTTCTTAG : GGGCAATGTAGAAAAGAAGGAGGCACTTGAAAATTTGGACCTTATTCTTTTGTGTCTGGATGAAATTGTTGATGGCGG : AATCGTTCTTGAAACGGATGCTAATGTTATTGCTGGGAAAGTGGCAAGCAACAGCGTTGATTCTGGGGCACCTTTGTCGGAGCAG : ACTATAAGTCAAGCATTGGCAACTGCACGAGAACACTTGGCAAGATCTCTTCTCAAATGATTTGTTGGGTCTACAAAAGAAAGGGAAAACAGGTCTTGCAAGTACTGATTTTCTTTCCTTCTGAATGAACTAATTGATGAGCATCAGTTTACATGTGTTTTG</gDNA_template>
            <first_frame> P  C  F  T  D  P  A  N  R  L  F  S  S  L  L  Y  G  V  Q  F  W  C  V  R  R  S  C  D  P  P  F  S  T  S  I  H  Q  Q  W :   R  S  A  L  Q  L  R  T  F  C  F  *  I  P  K  E  S  V  L  L  *  T  T  T  Q  M  I  G  Q  Q  M  L  Q  R  K  L  L  R  R  P  C  L  P  R  L  K  R  Q  M  L  G  Q  K  :  R  R  L  Q  C  L  I  I  I  L  L  S  T  S  L  L  K  I  F  I  S  L  L  L  G  V  T  M  K  M  K  *  S  L  P  V  F  S  K  D  S  L  M  L  L  V  F  F  L   : G  A  M  *  K  R  R  R  H  L  K  I  W  T  L  F  F  C  V  W  M  K  L  L  M  A   : E  S  F  L  K  R  M  L  M  L  L  L  G  K  W  Q  A  T  A  L  I  L  G  H  L  C  R  S  R :   L  *  V  K  H  W  Q  L  H  E  N  T  W  Q  D  L  F  S  N  D  L  L  G  L  Q  K  K  G  K  T  G  L  A  S  T  D  F  L  S  F  *  M  N  *  L  M  S  I  S  L  H  V  F   </first_frame>
            <second_frame>  R  A  L  R  T  Q  Q  I  G  S  S  P  P  F  S  T  A  C  N  S  G  V  S  V  G  R  A  I  R  H  F  Q  P  Q  F  T  N  N   : G  D  L  P  F  N  *  E  H  S  A  S  R  F  R  R  K  A  C  C  C  K  L  L  L  R  *  L  A  N  K  C  C  K  G  S  F  *  E  G  R  V  C  Q  D  S  K  D  K  C  *  G  R  S :   G  D  Y  N  V  *  *  L  Y  C  C  L  Q  V  C  S  R  S  S  F  L  C  Y  W  E  *  Q  *  K  *  N  N  P  C  Q  C  S  P  R  I  L  *  C  C  W  Y  S  S  *  :  G  Q  C  R  K  E  G  G  T  *  K  F  G  P  Y  S  F  V  S  G  *  N  C  *  W  R  :  N  R  S  *  N  G  C  *  C  Y  C  W  E  S  G  K  Q  Q  R  *  F  W  G  T  F  V  G  A   : D  Y  K  S  S  I  G  N  C  T  R  T  L  G  K  I  S  S  Q  M  I  C  W  V  Y  K  R  K  G  K  Q  V  L  Q  V  L  I  F  F  P  S  E  *  T  N  *  *  A  S  V  Y  M  C  F  </second_frame>
            <third_frame>   V  L  Y  G  P  S  K  *  A  L  L  L  P  S  L  R  R  A  I  L  V  C  P  *  V  V  R  S  A  I  F  N  L  N  S  P  T  M  :  E  I  C  P  S  I  K  N  I  L  L  L  D  S  E  G  K  R  V  A  V  N  Y  Y  S  D  D  W  P  T  N  A  A  K  E  A  F  E  K  A  V  F  A  K  T  Q  K  T  N  A  R  A  E   : A  E  I  T  M  F  D  N  Y  I  V  V  Y  K  F  A  Q  D  L  H  F  F  V  T  G  S  D  N  E  N  E  I  I  L  A  S  V  L  Q  G  F  F  D  A  V  G  I  L  L  R :   G  N  V  E  K  K  E  A  L  E  N  L  D  L  I  L  L  C  L  D  E  I  V  D  G  G :   I  V  L  E  T  D  A  N  V  I  A  G  K  V  A  S  N  S  V  D  S  G  A  P  L  S  E  Q  :  T  I  S  Q  A  L  A  T  A  R  E  H  L  A  R  S  L  L  K  *  F  V  G  S  T  K  E  R  E  N  R  S  C  K  Y  *  F  S  F  L  L  N  E  L  I  D  E  H  Q  F  T  C  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124948" stop="124907"/>
                    <exon start="123875" stop="123716"/>
                    <exon start="123205" stop="123058"/>
                    <exon start="122962" stop="122885"/>
                    <exon start="121225" stop="121141"/>
                    <exon start="121008" stop="120949"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>570</number_coding_nucleotides>
                  <number_encoded_amino_acids>190</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVRSAIFNLNSPTMEICPSIKNILLLDSEGKRVAVNYYSDDWPTNAAKEAFEKAVFAKTQKTNARAEAEITMFDNYIVVYKFAQDLHFFVTGSDNENEIILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLDEIVDGGIVLETDANVIAGKVASNSVDSGAPLSEQTISQALATAREHLARSLLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="129428" PGL_stop="126029"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129428" e_stop="128182"/>
            <exon e_start="126378" e_stop="126029"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.999" e_score="0.995"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="129428" e_stop="128182" e_length="1247"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.999">
            <gDNA_intron_boundary i_start="128181" i_stop="126379" i_length="1803"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="126378" e_stop="126029" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129428" stop="128693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129022" stop="128182"/>
              <exon start="126378" stop="126029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574265" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTAGATTTAGTAGTAGAAGTAACATAAAGCACAAAACTTTATGCTTTTCTTGAGCTTTTACACTCTCTAAAGTGTATCAGCAATCAAGAAAATTTTGCAGGAGCCACAAAAATGGGATTCACAATGGGTCTAAATTTGCTTCTTTTGGTAGCTATGGTGGCTACCAACATTCTTTCTTTGTATCATCTCTCTTCCAACATCCAATCCAAGCCCCCTGTTGCTCCACCTGTTCCTGACCACCTTCTGCATCAGCTTCAGACTATACGCGCCACTATTAACCACCTCACGCGCCTCCAGCCTCCAGCTCCACCATCTGGTAAAGCTAAGAAATCTACAGTAACGATCCCTTCTGATCTCCTTCTTTACACTCATTTATCACCTATTGCTTCTTCTTGTAAAGACAATCCTGATTTGCTTCATCAGTATATGAGCTACACACCCTTTAGTCTTTGCCCCTCAGATTCTTCAGTAGCTGAGTCTCTTATTCTTAGAGGGTGTCACCCTCTACCTAGGAGGCGCTGTTTTTCAAGAACCCCTTCTAGTATCCCCGCTTCTTTGCCTAAAACCCCTTTTTCTACTATCCCTGAAAAGGCCTTGTTGTGGAATAATTACACTTGTAAGAGCTTTTCTTGTTTGTCTCAGTCTAATCCCAACTTGGGATTTGATATGAAAGTTGAGCAATCAAGATTCTTGGATTTTAAGTCAGATCTAGATCTCCCAATTCCACAGTTTCTTCAGCTAACTAAGACCTCAAAGAGTGTTATTAGGCTGGCACTCGATATTGGGGGTGGTACAGGAACTTTTGCTGCACAAATGAAGCTGCATAATGTGACTGTTGTGACAACAACAATGAATCTTGGTGCCCCTTATAGTGAGACTGTGGCACTTAGGGGATTGGTGCCTTTACATGTACCTTTGCAGCAGAGGCTGCCAGTGTTTGATGGGGTGCTGGATCTTGTAAGATGTGGTCATGCTGTGAATAGGTGGATTCCAGTGACCATGATGGAGTTCTTGCTTTTTGATGTTGATAGAGTGTTGAGGGCTGGTGGATACCTCTGGTTGGACCATTTCTTTAGTAAAAGAGCAGATCTTGAGAAGGTTTTTCAACCCTTGATCTGGAAATTGAACTACAAGAAGGTGAAGTGGACAGTGGCTAATAAGAATGATGCTAGTGGTGTGAAGAATGGGGAAGTTTATTTGACAGCTCTTCTTCAGAAGCCGCTTTCGAGATGAACATCTAGTCCAG : ATACCACTGCTAGATTTGAATGATCATTTGATGCCAAATGCTGCTATGTTGTGTCAAGATATTCTCTTCTTCTCGAGGTAGAGAAATGCGATTAGTCTGCATTTGGAGCGAGAATGATCCAAACAATAGAAAGCTGTGTGCACCACAGAAATACAGTTTGCAGCAAACAACAGTAGCTGCTCTAATAGATAGCTATTTCCTTTCATTCATTTGTCAGTTTTGGTGTAATCTTTACTGATTTCGAAACTAAACAATAGTAGAGATAACAGAACTGCAAGTTTAAAAGTGATTATTATAAATGTAAAGATATTGCAGGAAAGTGAAAAAGAACTTGCTGAGTTCTTTGCTTC</gDNA_template>
            <first_frame> S  R  F  S  S  R  S  N  I  K  H  K  T  L  C  F  S  *  A  F  T  L  S  K  V  Y  Q  Q  S  R  K  F  C  R  S  H  K  N  G  I  H  N  G  S  K  F  A  S  F  G  S  Y  G  G  Y  Q  H  S  F  F  V  S  S  L  F  Q  H  P  I  Q  A  P  C  C  S  T  C  S  *  P  P  S  A  S  A  S  D  Y  T  R  H  Y  *  P  P  H  A  P  P  A  S  S  S  T  I  W  *  S  *  E  I  Y  S  N  D  P  F  *  S  P  S  L  H  S  F  I  T  Y  C  F  F  L  *  R  Q  S  *  F  A  S  S  V  Y  E  L  H  T  L  *  S  L  P  L  R  F  F  S  S  *  V  S  Y  S  *  R  V  S  P  S  T  *  E  A  L  F  F  K  N  P  F  *  Y  P  R  F  F  A  *  N  P  F  F  Y  Y  P  *  K  G  L  V  V  E  *  L  H  L  *  E  L  F  L  F  V  S  V  *  S  Q  L  G  I  *  Y  E  S  *  A  I  K  I  L  G  F  *  V  R  S  R  S  P  N  S  T  V  S  S  A  N  *  D  L  K  E  C  Y  *  A  G  T  R  Y  W  G  W  Y  R  N  F  C  C  T  N  E  A  A  *  C  D  C  C  D  N  N  N  E  S  W  C  P  L  *  *  D  C  G  T  *  G  I  G  A  F  T  C  T  F  A  A  E  A  A  S  V  *  W  G  A  G  S  C  K  M  W  S  C  C  E  *  V  D  S  S  D  H  D  G  V  L  A  F  *  C  *  *  S  V  E  G  W  W  I  P  L  V  G  P  F  L  *  *  K  S  R  S  *  E  G  F  S  T  L  D  L  E  I  E  L  Q  E  G  E  V  D  S  G  *  *  E  *  C  *  W  C  E  E  W  G  S  L  F  D  S  S  S  S  E  A  A  F  E  M  N  I  *  S  R :   Y  H  C  *  I  *  M  I  I  *  C  Q  M  L  L  C  C  V  K  I  F  S  S  S  R  G  R  E  M  R  L  V  C  I  W  S  E  N  D  P  N  N  R  K  L  C  A  P  Q  K  Y  S  L  Q  Q  T  T  V  A  A  L  I  D  S  Y  F  L  S  F  I  C  Q  F  W  C  N  L  Y  *  F  R  N  *  T  I  V  E  I  T  E  L  Q  V  *  K  *  L  L  *  M  *  R  Y  C  R  K  V  K  K  N  L  L  S  S  L  L  </first_frame>
            <second_frame>  V  D  L  V  V  E  V  T  *  S  T  K  L  Y  A  F  L  E  L  L  H  S  L  K  C  I  S  N  Q  E  N  F  A  G  A  T  K  M  G  F  T  M  G  L  N  L  L  L  L  V  A  M  V  A  T  N  I  L  S  L  Y  H  L  S  S  N  I  Q  S  K  P  P  V  A  P  P  V  P  D  H  L  L  H  Q  L  Q  T  I  R  A  T  I  N  H  L  T  R  L  Q  P  P  A  P  P  S  G  K  A  K  K  S  T  V  T  I  P  S  D  L  L  L  Y  T  H  L  S  P  I  A  S  S  C  K  D  N  P  D  L  L  H  Q  Y  M  S  Y  T  P  F  S  L  C  P  S  D  S  S  V  A  E  S  L  I  L  R  G  C  H  P  L  P  R  R  R  C  F  S  R  T  P  S  S  I  P  A  S  L  P  K  T  P  F  S  T  I  P  E  K  A  L  L  W  N  N  Y  T  C  K  S  F  S  C  L  S  Q  S  N  P  N  L  G  F  D  M  K  V  E  Q  S  R  F  L  D  F  K  S  D  L  D  L  P  I  P  Q  F  L  Q  L  T  K  T  S  K  S  V  I  R  L  A  L  D  I  G  G  G  T  G  T  F  A  A  Q  M  K  L  H  N  V  T  V  V  T  T  T  M  N  L  G  A  P  Y  S  E  T  V  A  L  R  G  L  V  P  L  H  V  P  L  Q  Q  R  L  P  V  F  D  G  V  L  D  L  V  R  C  G  H  A  V  N  R  W  I  P  V  T  M  M  E  F  L  L  F  D  V  D  R  V  L  R  A  G  G  Y  L  W  L  D  H  F  F  S  K  R  A  D  L  E  K  V  F  Q  P  L  I  W  K  L  N  Y  K  K  V  K  W  T  V  A  N  K  N  D  A  S  G  V  K  N  G  E  V  Y  L  T  A  L  L  Q  K  P  L  S  R  *  T  S  S  P   : D  T  T  A  R  F  E  *  S  F  D  A  K  C  C  Y  V  V  S  R  Y  S  L  L  L  E  V  E  K  C  D  *  S  A  F  G  A  R  M  I  Q  T  I  E  S  C  V  H  H  R  N  T  V  C  S  K  Q  Q  *  L  L  *  *  I  A  I  S  F  H  S  F  V  S  F  G  V  I  F  T  D  F  E  T  K  Q  *  *  R  *  Q  N  C  K  F  K  S  D  Y  Y  K  C  K  D  I  A  G  K  *  K  R  T  C  *  V  L  C  F </second_frame>
            <third_frame>   *  I  *  *  *  K  *  H  K  A  Q  N  F  M  L  F  L  S  F  Y  T  L  *  S  V  S  A  I  K  K  I  L  Q  E  P  Q  K  W  D  S  Q  W  V  *  I  C  F  F  W  *  L  W  W  L  P  T  F  F  L  C  I  I  S  L  P  T  S  N  P  S  P  L  L  L  H  L  F  L  T  T  F  C  I  S  F  R  L  Y  A  P  L  L  T  T  S  R  A  S  S  L  Q  L  H  H  L  V  K  L  R  N  L  Q  *  R  S  L  L  I  S  F  F  T  L  I  Y  H  L  L  L  L  L  V  K  T  I  L  I  C  F  I  S  I  *  A  T  H  P  L  V  F  A  P  Q  I  L  Q  *  L  S  L  L  F  L  E  G  V  T  L  Y  L  G  G  A  V  F  Q  E  P  L  L  V  S  P  L  L  C  L  K  P  L  F  L  L  S  L  K  R  P  C  C  G  I  I  T  L  V  R  A  F  L  V  C  L  S  L  I  P  T  W  D  L  I  *  K  L  S  N  Q  D  S  W  I  L  S  Q  I  *  I  S  Q  F  H  S  F  F  S  *  L  R  P  Q  R  V  L  L  G  W  H  S  I  L  G  V  V  Q  E  L  L  L  H  K  *  S  C  I  M  *  L  L  *  Q  Q  Q  *  I  L  V  P  L  I  V  R  L  W  H  L  G  D  W  C  L  Y  M  Y  L  C  S  R  G  C  Q  C  L  M  G  C  W  I  L  *  D  V  V  M  L  *  I  G  G  F  Q  *  P  *  W  S  S  C  F  L  M  L  I  E  C  *  G  L  V  D  T  S  G  W  T  I  S  L  V  K  E  Q  I  L  R  R  F  F  N  P  *  S  G  N  *  T  T  R  R  *  S  G  Q  W  L  I  R  M  M  L  V  V  *  R  M  G  K  F  I  *  Q  L  F  F  R  S  R  F  R  D  E  H  L  V  Q  :  I  P  L  L  D  L  N  D  H  L  M  P  N  A  A  M  L  C  Q  D  I  L  F  F  S  R  *  R  N  A  I  S  L  H  L  E  R  E  *  S  K  Q  *  K  A  V  C  T  T  E  I  Q  F  A  A  N  N  S  S  C  S  N  R  *  L  F  P  F  I  H  L  S  V  L  V  *  S  L  L  I  S  K  L  N  N  S  R  D  N  R  T  A  S  L  K  V  I  I  I  N  V  K  I  L  Q  E  S  E  K  E  L  A  E  F  F  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129400" stop="128195"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1203</number_coding_nucleotides>
                  <number_encoded_amino_acids>401</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STKLYAFLELLHSLKCISNQENFAGATKMGFTMGLNLLLLVAMVATNILSLYHLSSNIQSKPPVAPPVPDHLLHQLQTIRATINHLTRLQPPAPPSGKAKKSTVTIPSDLLLYTHLSPIASSCKDNPDLLHQYMSYTPFSLCPSDSSVAESLILRGCHPLPRRRCFSRTPSSIPASLPKTPFSTIPEKALLWNNYTCKSFSCLSQSNPNLGFDMKVEQSRFLDFKSDLDLPIPQFLQLTKTSKSVIRLALDIGGGTGTFAAQMKLHNVTVVTTTMNLGAPYSETVALRGLVPLHVPLQQRLPVFDGVLDLVRCGHAVNRWIPVTMMEFLLFDVDRVLRAGGYLWLDHFFSKRADLEKVFQPLIWKLNYKKVKWTVANKNDASGVKNGEVYLTALLQKPLSR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0066C13.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126347" stop="126141"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQMLLCCVKIFSSSRGREMRLVCIWSENDPNNRKLCAPQKYSLQQTTVAALIDSYFLSFICQFWCNLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 29 chains have been computed
$ 
$ memory statistics:
$ 43856 bytes spliced alignments in total
$ 20 spliced alignments have been stored
$ 2192 bytes was the average size of a spliced alignment
$ 22456 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1604 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 34 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-27 19:50:21
-->
