<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 01:35:31"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E709875" ref_strand="+" ref_description="SGN-E709875 [FA53CB01]">
      <seq>caccgattgaaacggacacctactctttcttggaagctgatatccttggggtaactactatatctgggcagagtagaagattccaacccaagcccaagttacaagtatacagagagagatatgatacaatcattcctgatttagatgtaggagagtctgtgtcatgtctgccagattcacaatccgttcattctgaaatggattttgtgaattctgagaagggacatggattacctgctgctgatgtccttgatttctcagtcagaggatttgatattattacagaatctgcacatgatttcccagttcatgaagactatgttgtggaggcttctcttccagatgctgacatcccagaaaatcactctgaggctacttctcaaatgcctgaggaatctgtaccacagaggcccaagaataaaaaacaaaaattccctgcatctgaactttctgcaattagtgaagagaacggagagagtagattattaaggagtagaagaaagtccgtgaatgcatctagactagtagatgagtctgatgaagacgtaattggtgatggggaatatgtgcctgaacatcctaatgattctgttacaattgggaatgatgaggagtttttggtggaaaatgactcacaagggaaaaaggtacagaagaagtccaagaaaacagctactaaggaaggaaaaccagttacgaagagtaaaaagactgctgaagcttctgatcaggcagccaacaagaagcctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="1138" stop="2673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1438" g_stop="1495" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="66" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1496" i_stop="1573" i_length="78">
            <donor d_prob="0.829" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1574" g_stop="1905" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="398" r_length="332" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1906" i_stop="2020" i_length="115">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2021" g_stop="2373" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="751" r_length="353" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E709875" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1438" e_stop="1495"/>
          <exon e_start="1574" e_stop="1905"/>
          <exon e_start="2021" e_stop="2373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACGGACACCTACTCTTTCTTGGAAGCTGATATCCTTGGGGTAACTACTATATCTGGTATGACTGAATCTTTAGGTTCTGCACTAGTACCAGGTTATATACTGTGCTCCTTCTAAATTTCTTATTGTTATTCAGGGCAGAGTAGAAGATTCCAACCCAAGCCCAAGTTACAAGTATACAGAGAGAGATATGATACAATCATTCCTGATTTAGATGTAGGAGAGTCTGTGCCATGTCTGCCAGATTCACAATCCGTTCATTCTGAAATGGATTTTGTGAATTCTGAGAAGGGACATGGATTACCTGCTGCTGATGTCCTTGATTTCTCAGTCAGAGGATTTGATATTATTACAGAATCTGCACATGATTTCCCAGTTCATGAAGACTATGTTGTGGAGGCTTCTCTTCCAGATGCTGACATCCCAGAAAATCACTCTGAGGCTACTTCTCAAATGCCTGAGGAATCTGTAAATCCTTAACTTGTTTTTTGTATTCTTTAGTTATTTCTCTAATTTATGCAATGGTTTGCCTCGTTGGAGTCCTTTGTTCCTCTTCTTCACCCACTTGCAACTGTCTTTTTAGGTACCACAGAGGCCCAAGAATAAAAAACAAAAATTCCCTGCATCTGAACTTTCTGCAATTAGTGAAGAGAACGGAGAGAGTAGATTATTAAGGAGTAGAAGAAAGTCCGTGAATGCATCTAGACTAGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAA</genome_strand>
        <mrna_strand>GAAACGGACACCTACTCTTTCTTGGAAGCTGATATCCTTGGGGTAACTACTATATCTG..............................................................................GGCAGAGTAGAAGATTCCAACCCAAGCCCAAGTTACAAGTATACAGAGAGAGATATGATACAATCATTCCTGATTTAGATGTAGGAGAGTCTGTGTCATGTCTGCCAGATTCACAATCCGTTCATTCTGAAATGGATTTTGTGAATTCTGAGAAGGGACATGGATTACCTGCTGCTGATGTCCTTGATTTCTCAGTCAGAGGATTTGATATTATTACAGAATCTGCACATGATTTCCCAGTTCATGAAGACTATGTTGTGGAGGCTTCTCTTCCAGATGCTGACATCCCAGAAAATCACTCTGAGGCTACTTCTCAAATGCCTGAGGAATCT...................................................................................................................GTACCACAGAGGCCCAAGAATAAAAAACAAAAATTCCCTGCATCTGAACTTTCTGCAATTAGTGAAGAGAACGGAGAGAGTAGATTATTAAGGAGTAGAAGAAAGTCCGTGAATGCATCTAGACTAGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGCTACTAAGGAAGGAAAACCAGTTACGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E550717" ref_strand="+" ref_description="SGN-E550717 [TUS-50-E3]">
      <seq>agtagatgagtctgatgaagacgtaattggtgatggggaatatgtgcctgaacatcctaatgattctgttacaattgggaatgatgaggagtttttggtggaaaatgactcacaagggaaaaaggtacagaagaagtccaagaaaacagttactaaggaaggaaaacgagttaggaagagtaaaaagactgctgaagcttctgatcaggcagccaacaagaagcctaagaagttttctcattccactcgtcaaaagaggagaacagtggataaggctttgcttgaggctcccatggatgagattgactattcaaaggtgcctattaaggatctaattttattagctgagcacagagagcggttggcgaaaaaagatgcagcagtgtcacagatgcctcctactactacagatcagagtgctggtgcatctgtttctaattatgatgaggatgagacctatgcttcagatgaagatggggaagctgatgatcataataaaagtactatgggtgaagatacttcttcctacttcaattatcagacttacatggacaagacccccagcacaaggtggtcaaaacaggacacagaacttttctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="1846" stop="4068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2146" g_stop="2411" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2492" g_stop="2592" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="367" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2726" g_stop="2775" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="417" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3584" g_stop="3768" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="602" r_length="185" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E550717" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550717" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2146" e_stop="2411"/>
          <exon e_start="2492" e_stop="2592"/>
          <exon e_start="2726" e_stop="2775"/>
          <exon e_start="3584" e_stop="3768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAGGTAATCCTAGTGGGTATTGCTTCCGTTTGGGTTAGCTATAGCTATGATTGTTTGTTGACCAGGAACGTCCTTGTTTACAGTGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCGGTACGTTTCTTCTTTATTTTTCTCTTGTTTGCCATCAACCTTTTATAACAAGGAAAAATTAAAATGATAAGTTTTGTTATTTGATAGTCTTCCTTGATTCTCTTGTTTCATTGCTTGCCATCCTTACTTGCAGAAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAGGTATCAGAAGCTTATGTTCAATTAATAAAATATACTAATCTACATTTATCTTTTGCTTTGTTTGTGAAAAAAATACTAATCCTTGTTTAACCATTTGCTTAGTGTTTCTCGTTTACTGCATAGTTTAATATAGCTGTTCTTGTTGATAGTGAAAATGTAGATGATGCGTATAGGTTATTGTTGGCTTAACACATTCTATTTTTTATTCGCAACGTCTGCTTCTAACTATTTAAGAGCATCACTGGTCTTTCTTATATTGTCTACAGCTTCATTATTTTCTTTACTTTTAGAACTGTTCTAATTACCACTCCAACAACTCTCGTATCAATTCTTCTTTAATGTTTCTCTTGACCAATTTATAATGGTCCTATGGGGTCTATTATGAGAAATTATTTTCGTTAGTTATAGGTAAATGATAAGAGAGATGCCACTAGTAAATACTTCATGCTTAAATATGTTATATATGTGTGCTCCTTCAAGCCGATATATATATATTAGGAGGTCATACTTAGGTGATCTTTGACATGGTTTGAGCTGTATAATTTTCATATCTAATATGAGAAATAATTGTAAAGTACTCTAATTCAATATTGGACACTTAAATTGTATTTCCGGAAGGTAAAATTATCATGACAAGAGATCTTAGAAGTTCGATACATGCTGGAATAGCTTTGTTATCAGTTATTGTTTTTTTGTGTCGAAGTGCACATTTTTACTTGTGCTGGATGGTGTTGCATGTATTTTTGCCTTTGGGACGAAACCCTTCCCTTTTCAAGTCACAGTTTCTTCATGACTTGTGTTTGTGCAGTGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATG</genome_strand>
        <mrna_strand>AGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG................................................................................TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG.....................................................................................................................................AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E688380" ref_strand="+" ref_description="SGN-E688380 [t3_tus_50_e03]">
      <seq>agtagatgagtctgatgaagacgtaattggtgatggggaatatgtgcctgaacatcctaatgattctgttacaattgggaatgatgaggagtttttggtggaaaatgactcacaagggaaaaaggtacagaagaagtccaagaaaacagttactaaggaaggaaaacgagttaggaagagtaaaaagactgctgaagcttctgatcaggcagccaacaagaagcctaagaagttttctcattccactcgtcaaaagaggagaacagtggataaggctttgcttgaggctcccatggatgagattgactattcaaaggtgcctattaaggatctaattttattagctgagcacagagagcggttggcgaaaaaagatgcagcagtgtcacagatgcctcctactactacagatcagagtgctggtgcatctgtttctaattatgatgaggatgagacctatgcttcagatgaagatggggaagctgatgatcataataaaagtactatgggtgaagatacttcttcctacttcaattatcagacttacatggacaagacccccagcacaaggtggtcaaaacaggacacagaacttttctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="1846" stop="4068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2146" g_stop="2411" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2492" g_stop="2592" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="367" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2726" g_stop="2775" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="417" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3584" g_stop="3768" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="602" r_length="185" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E688380" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2146" e_stop="2411"/>
          <exon e_start="2492" e_stop="2592"/>
          <exon e_start="2726" e_stop="2775"/>
          <exon e_start="3584" e_stop="3768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAGGTAATCCTAGTGGGTATTGCTTCCGTTTGGGTTAGCTATAGCTATGATTGTTTGTTGACCAGGAACGTCCTTGTTTACAGTGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCGGTACGTTTCTTCTTTATTTTTCTCTTGTTTGCCATCAACCTTTTATAACAAGGAAAAATTAAAATGATAAGTTTTGTTATTTGATAGTCTTCCTTGATTCTCTTGTTTCATTGCTTGCCATCCTTACTTGCAGAAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAGGTATCAGAAGCTTATGTTCAATTAATAAAATATACTAATCTACATTTATCTTTTGCTTTGTTTGTGAAAAAAATACTAATCCTTGTTTAACCATTTGCTTAGTGTTTCTCGTTTACTGCATAGTTTAATATAGCTGTTCTTGTTGATAGTGAAAATGTAGATGATGCGTATAGGTTATTGTTGGCTTAACACATTCTATTTTTTATTCGCAACGTCTGCTTCTAACTATTTAAGAGCATCACTGGTCTTTCTTATATTGTCTACAGCTTCATTATTTTCTTTACTTTTAGAACTGTTCTAATTACCACTCCAACAACTCTCGTATCAATTCTTCTTTAATGTTTCTCTTGACCAATTTATAATGGTCCTATGGGGTCTATTATGAGAAATTATTTTCGTTAGTTATAGGTAAATGATAAGAGAGATGCCACTAGTAAATACTTCATGCTTAAATATGTTATATATGTGTGCTCCTTCAAGCCGATATATATATATTAGGAGGTCATACTTAGGTGATCTTTGACATGGTTTGAGCTGTATAATTTTCATATCTAATATGAGAAATAATTGTAAAGTACTCTAATTCAATATTGGACACTTAAATTGTATTTCCGGAAGGTAAAATTATCATGACAAGAGATCTTAGAAGTTCGATACATGCTGGAATAGCTTTGTTATCAGTTATTGTTTTTTTGTGTCGAAGTGCACATTTTTACTTGTGCTGGATGGTGTTGCATGTATTTTTGCCTTTGGGACGAAACCCTTCCCTTTTCAAGTCACAGTTTCTTCATGACTTGTGTTTGTGCAGTGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATG</genome_strand>
        <mrna_strand>AGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG................................................................................TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG.....................................................................................................................................AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202681" ref_strand="+" ref_description="SGN-E202681 [cLEC-19-B12]">
      <seq>gtagatgagtctgatgaagacgtaattggtgatggggaatatgtgcctgaacatcctaatgattctgttacaattgggaatgatgaggagtttttggtggaaaatgactcacacgggaaaaaggtacagaagaagtccaagaaaacagttactaaggaaggaaaacgagttaggaagagtaaaaagactgctgaagcttctgatcaggcagccaacaagaagcctaagaagttttctcattccactcgtcaaaagaggagaacagtggataaggctttgcttgaggctcccatggatgagattgactattcaaaggtgcctattaaggatctaattttattatctgagcacacagagcggttggcgaaaaaagatgcatcagtgtcacagatgcctgctactactacagatcagagtgctggtgcatctgtttctaattatgatgaggatgagacctatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="1847" stop="3929"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2147" g_stop="2411" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2492" g_stop="2592" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="366" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2726" g_stop="2775" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="416" r_length="50" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3584" g_stop="3629" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="462" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E202681" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2147" e_stop="2411"/>
          <exon e_start="2492" e_stop="2592"/>
          <exon e_start="2726" e_stop="2775"/>
          <exon e_start="3584" e_stop="3629"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAGGTAATCCTAGTGGGTATTGCTTCCGTTTGGGTTAGCTATAGCTATGATTGTTTGTTGACCAGGAACGTCCTTGTTTACAGTGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCGGTACGTTTCTTCTTTATTTTTCTCTTGTTTGCCATCAACCTTTTATAACAAGGAAAAATTAAAATGATAAGTTTTGTTATTTGATAGTCTTCCTTGATTCTCTTGTTTCATTGCTTGCCATCCTTACTTGCAGAAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAGGTATCAGAAGCTTATGTTCAATTAATAAAATATACTAATCTACATTTATCTTTTGCTTTGTTTGTGAAAAAAATACTAATCCTTGTTTAACCATTTGCTTAGTGTTTCTCGTTTACTGCATAGTTTAATATAGCTGTTCTTGTTGATAGTGAAAATGTAGATGATGCGTATAGGTTATTGTTGGCTTAACACATTCTATTTTTTATTCGCAACGTCTGCTTCTAACTATTTAAGAGCATCACTGGTCTTTCTTATATTGTCTACAGCTTCATTATTTTCTTTACTTTTAGAACTGTTCTAATTACCACTCCAACAACTCTCGTATCAATTCTTCTTTAATGTTTCTCTTGACCAATTTATAATGGTCCTATGGGGTCTATTATGAGAAATTATTTTCGTTAGTTATAGGTAAATGATAAGAGAGATGCCACTAGTAAATACTTCATGCTTAAATATGTTATATATGTGTGCTCCTTCAAGCCGATATATATATATTAGGAGGTCATACTTAGGTGATCTTTGACATGGTTTGAGCTGTATAATTTTCATATCTAATATGAGAAATAATTGTAAAGTACTCTAATTCAATATTGGACACTTAAATTGTATTTCCGGAAGGTAAAATTATCATGACAAGAGATCTTAGAAGTTCGATACATGCTGGAATAGCTTTGTTATCAGTTATTGTTTTTTTGTGTCGAAGTGCACATTTTTACTTGTGCTGGATGGTGTTGCATGTATTTTTGCCTTTGGGACGAAACCCTTCCCTTTTCAAGTCACAGTTTCTTCATGACTTGTGTTTGTGCAGTGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCT</genome_strand>
        <mrna_strand>GTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACACGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG................................................................................TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTATCTGAGCACACAGAGCGGTTGGCG.....................................................................................................................................AAAAAAGATGCATCAGTGTCACAGATGCCTGCTACTACTACAGATCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249489" ref_strand="+" ref_description="SGN-E249489 [cLEF-56-K16]">
      <seq>gtacagaagaagtccaagaaaacagttactaaggaaggaaaacgagttaggaagagtaaaaagactgctgaagcttctgatcaggcagccaacaagaagcctaagaagttttctcattccactcgtcaaaagaggagaacagtggataaggctttgcttgaggctcccatggatgagattgactattcaaaggtgcctattaaggatctaattttattagctgagcacagagagcggttggcgaaaaaagatgcagcagtgtcacagatgcctcctactactacagatcagagtgctggtgcatctgtttctaattatgatgaggatgagacctatgcttcagatgaagatggggaagctgatgatcataataaaagtactatgggtgaagatacttcttcctacttcaattatcagacttacatggacaagacccccagcacaaggtggtcaaaacaggacacagaacttttctatgaggtacacccctttcatttgtagcctactgaatgatgcataagtaaaattgggagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="1970" stop="4125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2270" g_stop="2411" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2492" g_stop="2592" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="243" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2726" g_stop="2775" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="293" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3584" g_stop="3825" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="535" r_length="242" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E249489" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2270" e_stop="2411"/>
          <exon e_start="2492" e_stop="2592"/>
          <exon e_start="2726" e_stop="2775"/>
          <exon e_start="3584" e_stop="3825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAGGTAATCCTAGTGGGTATTGCTTCCGTTTGGGTTAGCTATAGCTATGATTGTTTGTTGACCAGGAACGTCCTTGTTTACAGTGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCGGTACGTTTCTTCTTTATTTTTCTCTTGTTTGCCATCAACCTTTTATAACAAGGAAAAATTAAAATGATAAGTTTTGTTATTTGATAGTCTTCCTTGATTCTCTTGTTTCATTGCTTGCCATCCTTACTTGCAGAAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAGGTATCAGAAGCTTATGTTCAATTAATAAAATATACTAATCTACATTTATCTTTTGCTTTGTTTGTGAAAAAAATACTAATCCTTGTTTAACCATTTGCTTAGTGTTTCTCGTTTACTGCATAGTTTAATATAGCTGTTCTTGTTGATAGTGAAAATGTAGATGATGCGTATAGGTTATTGTTGGCTTAACACATTCTATTTTTTATTCGCAACGTCTGCTTCTAACTATTTAAGAGCATCACTGGTCTTTCTTATATTGTCTACAGCTTCATTATTTTCTTTACTTTTAGAACTGTTCTAATTACCACTCCAACAACTCTCGTATCAATTCTTCTTTAATGTTTCTCTTGACCAATTTATAATGGTCCTATGGGGTCTATTATGAGAAATTATTTTCGTTAGTTATAGGTAAATGATAAGAGAGATGCCACTAGTAAATACTTCATGCTTAAATATGTTATATATGTGTGCTCCTTCAAGCCGATATATATATATTAGGAGGTCATACTTAGGTGATCTTTGACATGGTTTGAGCTGTATAATTTTCATATCTAATATGAGAAATAATTGTAAAGTACTCTAATTCAATATTGGACACTTAAATTGTATTTCCGGAAGGTAAAATTATCATGACAAGAGATCTTAGAAGTTCGATACATGCTGGAATAGCTTTGTTATCAGTTATTGTTTTTTTGTGTCGAAGTGCACATTTTTACTTGTGCTGGATGGTGTTGCATGTATTTTTGCCTTTGGGACGAAACCCTTCCCTTTTCAAGTCACAGTTTCTTCATGACTTGTGTTTGTGCAGTGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAGGTACACCCCTTTCATTTGTAGCCTACTGAATGATGCATAAGTAAAATTGGGAGAT</genome_strand>
        <mrna_strand>GTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG................................................................................TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG.....................................................................................................................................AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAGGTACACCCCTTTCATTTGTAGCCTACTGAATGATGCATAAGTAAAATTGGGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E309024" ref_strand="+" ref_description="SGN-E309024 [cLEZ-1-C3]">
      <seq>agaagtccaagaaaacagttactaaggaaggaaaacgagttaggaagagtaaaaagactgctgaagcttctgatcaggcagccaacaagaagcctaagaagttttctcattccactcgtcaaaagaggagaacagtggataaggctttgcttgaggctcccatggatgagattgactattcaaaggtgcctattaaggatctaattttattagctgagcacagagagcggttggcgaaaaaagatgcagcagtgtcacagatgcctcctactactacagatcagagtgctggtgcatctgtttctaattatgatgaggatgagacctatgcttcagatgaagatggggaagctgatgatcataataaaagtactatgggtgaagatacttcttcctacttcaattatcagacttacatggacaagacccccagcacaaggtggtcaaaacaggacacagaacttttctatgaggctgtgcagcagtttgggacagatttatcccttatacaacaactttttcctggccggacacgtagacagctaaagctaaaatacaagaaagaagagcggcaaaatccatttaggcttcatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="1977" stop="4931"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2277" g_stop="2411" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2492" g_stop="2592" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="236" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2726" g_stop="2775" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="286" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3584" g_stop="3770" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="473" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3771" i_stop="4508" i_length="738">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4509" g_stop="4631" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="596" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E309024" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2277" e_stop="2411"/>
          <exon e_start="2492" e_stop="2592"/>
          <exon e_start="2726" e_stop="2775"/>
          <exon e_start="3584" e_stop="3770"/>
          <exon e_start="4509" e_stop="4631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAGGTAATCCTAGTGGGTATTGCTTCCGTTTGGGTTAGCTATAGCTATGATTGTTTGTTGACCAGGAACGTCCTTGTTTACAGTGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCGGTACGTTTCTTCTTTATTTTTCTCTTGTTTGCCATCAACCTTTTATAACAAGGAAAAATTAAAATGATAAGTTTTGTTATTTGATAGTCTTCCTTGATTCTCTTGTTTCATTGCTTGCCATCCTTACTTGCAGAAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAGGTATCAGAAGCTTATGTTCAATTAATAAAATATACTAATCTACATTTATCTTTTGCTTTGTTTGTGAAAAAAATACTAATCCTTGTTTAACCATTTGCTTAGTGTTTCTCGTTTACTGCATAGTTTAATATAGCTGTTCTTGTTGATAGTGAAAATGTAGATGATGCGTATAGGTTATTGTTGGCTTAACACATTCTATTTTTTATTCGCAACGTCTGCTTCTAACTATTTAAGAGCATCACTGGTCTTTCTTATATTGTCTACAGCTTCATTATTTTCTTTACTTTTAGAACTGTTCTAATTACCACTCCAACAACTCTCGTATCAATTCTTCTTTAATGTTTCTCTTGACCAATTTATAATGGTCCTATGGGGTCTATTATGAGAAATTATTTTCGTTAGTTATAGGTAAATGATAAGAGAGATGCCACTAGTAAATACTTCATGCTTAAATATGTTATATATGTGTGCTCCTTCAAGCCGATATATATATATTAGGAGGTCATACTTAGGTGATCTTTGACATGGTTTGAGCTGTATAATTTTCATATCTAATATGAGAAATAATTGTAAAGTACTCTAATTCAATATTGGACACTTAAATTGTATTTCCGGAAGGTAAAATTATCATGACAAGAGATCTTAGAAGTTCGATACATGCTGGAATAGCTTTGTTATCAGTTATTGTTTTTTTGTGTCGAAGTGCACATTTTTACTTGTGCTGGATGGTGTTGCATGTATTTTTGCCTTTGGGACGAAACCCTTCCCTTTTCAAGTCACAGTTTCTTCATGACTTGTGTTTGTGCAGTGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAGGTACACCCCTTTCATTTGTAGCCTACTGAATGATGCATAAGTAAAATTGGGAGATAGTTGAAATTCGATCAAGAAAAATAAGTTTTATATAGGGGATCTTACAAGTGCAACTTATAAAGTGCACAAGTTATTAGATTCACCTATGCATTCCACATCAAAGTTTGTGGAGTTCTTTCATAGATCCGTCAATTCTGTTCAAAATCAAATTTGCTTCAATGGTTGAGACCTTCCTATGAGATAGCAGTGAAAGACTCCTGTTGGACATGCTTGTTGGTATTTATTTATTGATAACTGTTGCTTTGTTTTCTCTATTTGAGATAAGGTCCTTTTCAAATATTACATGAATATACTTATTCAAGTGAATTGTGGGATTCAAAGGCACCCATAACAACGACATACTCACTGAGGTCCCACAAGTGGGATGTGGGAGGGTAGAGTGTCCCAGACCTTATCCCACTACCTTAGGCATCCATACCAAAGCATATGGGATGAATTCCCTTTTATATTGTAATTGTTAAGTTTTATGTGAAGAGTAGGGGAGCAGACCCCAGATGCAACGAGTATTCAGGTATTTGAAAGATTATACAACTGTTGGCTTGAAGGTGTCATGACACCAAATAGAGCTAATGGATAAAGATGCTTTATGTGATTGGCATAAATGGTACTGTGATGCACTCCATACACTTCTGTTCTTTTTCCTTGGTATTCTCTTAAACAATTAAACAAACTTGTCTTCAGGCTGTGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGAT</genome_strand>
        <mrna_strand>AGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG................................................................................TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG.....................................................................................................................................AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E273926" ref_strand="+" ref_description="SGN-E273926 [cLEN-7-J23]">
      <seq>atggatgagattgactattcaaaggtgcctattaaggatctaattttattagctgagcacagagagcggttggcgaaaaaagatgcagcagtgtcacagatgcctcctactactacagatcagagtgctggtgcatctgtttctaattatgatgaggatgagacctatgcttcagatgaagatggggaagctgatgatcataataaaagtactatgggtgaagatacttcttcctacttcaattatcagacttacatggacaagacccccagcacaaggtggtcaaaacaggacacagaacttttctatgaggctgtgcagcagtttgggacagatttatcccttatacaacaactttttcctggccggacacgtagacagctaaagctaaaatacaagaaagaagagcggcaaaatccatttaggcttcatgatgttctaacaaatcgttcgaaagatcattcccacttcgaacgagtaatcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="2218" stop="5308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2518" g_stop="2592" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2726" g_stop="2775" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="125" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3584" g_stop="3770" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="312" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3771" i_stop="4508" i_length="738">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4509" g_stop="4653" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="457" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4654" i_stop="4979" i_length="326">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4980" g_stop="5008" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="486" r_length="29" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E273926" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273926" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2518" e_stop="2592"/>
          <exon e_start="2726" e_stop="2775"/>
          <exon e_start="3584" e_stop="3770"/>
          <exon e_start="4509" e_stop="4653"/>
          <exon e_start="4980" e_stop="5008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCGGTACGTTTCTTCTTTATTTTTCTCTTGTTTGCCATCAACCTTTTATAACAAGGAAAAATTAAAATGATAAGTTTTGTTATTTGATAGTCTTCCTTGATTCTCTTGTTTCATTGCTTGCCATCCTTACTTGCAGAAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAGGTATCAGAAGCTTATGTTCAATTAATAAAATATACTAATCTACATTTATCTTTTGCTTTGTTTGTGAAAAAAATACTAATCCTTGTTTAACCATTTGCTTAGTGTTTCTCGTTTACTGCATAGTTTAATATAGCTGTTCTTGTTGATAGTGAAAATGTAGATGATGCGTATAGGTTATTGTTGGCTTAACACATTCTATTTTTTATTCGCAACGTCTGCTTCTAACTATTTAAGAGCATCACTGGTCTTTCTTATATTGTCTACAGCTTCATTATTTTCTTTACTTTTAGAACTGTTCTAATTACCACTCCAACAACTCTCGTATCAATTCTTCTTTAATGTTTCTCTTGACCAATTTATAATGGTCCTATGGGGTCTATTATGAGAAATTATTTTCGTTAGTTATAGGTAAATGATAAGAGAGATGCCACTAGTAAATACTTCATGCTTAAATATGTTATATATGTGTGCTCCTTCAAGCCGATATATATATATTAGGAGGTCATACTTAGGTGATCTTTGACATGGTTTGAGCTGTATAATTTTCATATCTAATATGAGAAATAATTGTAAAGTACTCTAATTCAATATTGGACACTTAAATTGTATTTCCGGAAGGTAAAATTATCATGACAAGAGATCTTAGAAGTTCGATACATGCTGGAATAGCTTTGTTATCAGTTATTGTTTTTTTGTGTCGAAGTGCACATTTTTACTTGTGCTGGATGGTGTTGCATGTATTTTTGCCTTTGGGACGAAACCCTTCCCTTTTCAAGTCACAGTTTCTTCATGACTTGTGTTTGTGCAGTGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAGGTACACCCCTTTCATTTGTAGCCTACTGAATGATGCATAAGTAAAATTGGGAGATAGTTGAAATTCGATCAAGAAAAATAAGTTTTATATAGGGGATCTTACAAGTGCAACTTATAAAGTGCACAAGTTATTAGATTCACCTATGCATTCCACATCAAAGTTTGTGGAGTTCTTTCATAGATCCGTCAATTCTGTTCAAAATCAAATTTGCTTCAATGGTTGAGACCTTCCTATGAGATAGCAGTGAAAGACTCCTGTTGGACATGCTTGTTGGTATTTATTTATTGATAACTGTTGCTTTGTTTTCTCTATTTGAGATAAGGTCCTTTTCAAATATTACATGAATATACTTATTCAAGTGAATTGTGGGATTCAAAGGCACCCATAACAACGACATACTCACTGAGGTCCCACAAGTGGGATGTGGGAGGGTAGAGTGTCCCAGACCTTATCCCACTACCTTAGGCATCCATACCAAAGCATATGGGATGAATTCCCTTTTATATTGTAATTGTTAAGTTTTATGTGAAGAGTAGGGGAGCAGACCCCAGATGCAACGAGTATTCAGGTATTTGAAAGATTATACAACTGTTGGCTTGAAGGTGTCATGACACCAAATAGAGCTAATGGATAAAGATGCTTTATGTGATTGGCATAAATGGTACTGTGATGCACTCCATACACTTCTGTTCTTTTTCCTTGGTATTCTCTTAAACAATTAAACAAACTTGTCTTCAGGCTGTGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGTTCTAACAAATCGTTCGAAAGGTAAATGTTGTTCAACTTTCTCTGCTGCACTCACAGCTATATATTTTGCCAAAGACTCGTTGTTGTGATAACATTTCGTTTTTAATGGGTGTAAAATAGAGTTTGGGGATGCATTGTATGAATGCAACTTTTCTTTTTCATCCAATAAAGAGTAATGTTTCATCAACATGACAAGTATGCACCACTTAAATTTTCCTTCTATGTCATCAGACCATCAAAGAGGGAAAAAGGATCGTTGACCTGAAGAAGAGCCTTCTTTAGTAAAATGTGTCACATTTTTTTGAAGTTCTCTATAGAGGTTTTACATGATACTATACTTGTTGCAGATCATTCCCACTTCGAACGAGTAATCGAG</genome_strand>
        <mrna_strand>ATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG.....................................................................................................................................AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGTTCTAACAAATCGTTCGAAAG......................................................................................................................................................................................................................................................................................................................................ATCATTCCCACTTCGAACGAGTAATCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E350922" ref_strand="+" ref_description="SGN-E350922 [cTOS-7-N15]">
      <seq>tgcagcagtttgggacagatttatcccttatacaacaactttttcctggccggacacgtagacagctaaagctaaaatacaagaaagaagagcggcaaaatccatttaggcttcatgatgttctaacaaatcgttcgaaagatcattcccacttcgaacgagtaatcgagcatttaaagcaaattgaagctgaggaattgcagtacgctgataaagacgagtcaattgacttgactggggaggaggaaatggtggggaatcaggagatctgtgaagaagcgaagtctgaacatgttgaggaaaaagaagttgaaacagtggagcaagatgttccgaatccagttaaggagtatgatgatgatgaagatgatttcatgaaatggagtcagtatacgagtgaagtgtgaatgatgttaagtttcagttaatctatattctcctgccacaagggatctttacatctcttttgttaaattcctttttgaactcgggccaacaatatggtgtacttgagataatcatttcaacggaatatagcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="4213" stop="5986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4513" g_stop="4653" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4654" i_stop="4979" i_length="326">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4980" g_stop="5110" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="272" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5111" i_stop="5416" i_length="306">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5417" g_stop="5686" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="542" r_length="270" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="543" polyA_stop="555"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E350922" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4513" e_stop="4653"/>
          <exon e_start="4980" e_stop="5110"/>
          <exon e_start="5417" e_stop="5686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGTTCTAACAAATCGTTCGAAAGGTAAATGTTGTTCAACTTTCTCTGCTGCACTCACAGCTATATATTTTGCCAAAGACTCGTTGTTGTGATAACATTTCGTTTTTAATGGGTGTAAAATAGAGTTTGGGGATGCATTGTATGAATGCAACTTTTCTTTTTCATCCAATAAAGAGTAATGTTTCATCAACATGACAAGTATGCACCACTTAAATTTTCCTTCTATGTCATCAGACCATCAAAGAGGGAAAAAGGATCGTTGACCTGAAGAAGAGCCTTCTTTAGTAAAATGTGTCACATTTTTTTGAAGTTCTCTATAGAGGTTTTACATGATACTATACTTGTTGCAGATCATTCCCACTTCGAACGAGTAATCGAGCATTTAAAGCAAATTGAAGCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAAATGGTGGGGAATCAGGAGATCTGTGTATGAATCTTCTCTTGCTTCTCATCATCTTTCTTGTATATCTTTCTCTATGTGGGGGGTGGGGGGTGCAGGCTCTTATCTATTATGTTTCTTTTCTATAATGTTATATCTGCACAATGCATCACTATACTAATGCACATGTCATTATGATGTTTTTTTGTGCTATTACCTGGCTGGAGAAATTAAGGAGGAATGTGGCTACGTGGTTTGAGTAGACTATTATCAGGGTTGTTTTCGAGAAATTATCTTTTTATCCCTCTTTTTTCTTTCCGATGCCTGATTCTTGATAATGATTGAGCACAGCAGGAAGAAGCGAAGTCTGAACATGTTGAGGAAAAAGAAGTTGAAACAGTGGAGCAAGATGTTCCGAATCCAGTTAAGGAGTATGATGATGATGAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGAATGATGTTAAGTTTCAGTTAATCTATATTCTCCTGCCACAAGGGATCTTTACATCTCTTTTGTTAAATTCCTTTTTGAACTCGGGCCAACAATATGGTGTACTTGAGATAATCATTTCAACGGAATATAGCAAAA</genome_strand>
        <mrna_strand>TGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGTTCTAACAAATCGTTCGAAAG......................................................................................................................................................................................................................................................................................................................................ATCATTCCCACTTCGAACGAGTAATCGAGCATTTAAAGCAAATTGAAGCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAAATGGTGGGGAATCAGGAGATCTGT..................................................................................................................................................................................................................................................................................................................GAAGAAGCGAAGTCTGAACATGTTGAGGAAAAAGAAGTTGAAACAGTGGAGCAAGATGTTCCGAATCCAGTTAAGGAGTATGATGATGATGAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGAATGATGTTAAGTTTCAGTTAATCTATATTCTCCTGCCACAAGGGATCTTTACATCTCTTTTGTTAAATTCCTTTTTGAACTCGGGCCAACAATATGGTGTACTTGAGATAATCATTTCAACGGAATATAGCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E309025" ref_strand="+" ref_description="SGN-E309025 [cLEZ-1-C3](-)">
      <seq>atcgttcgaaagatcattcccacttcgaacgagtaatcgagcatttaaagcaaattgaagctgaggaattgcagtacgctgataaagacgagtcaattgacttgactggggaggaggaaatggtggggaatcaggagatctgtcaggaagaagcgaagtctgaacatgttgaggaaaaagaagttgaaacagtggagcaagatgttccgaatccagttaaggagtatgatgatgatgaagatgatttcatgaaatggagtcagtatacgagtgaagtgtgaatgatgttaagtttcagttaatctatattctcctgccacaagggatctttacatctcttttgttaaattcctttttgaactcgggccaacaatatggtgtacttgagataatcatttcaacggaatatagcaaaagggccaagtgttattaatatgtagtgacaatgtaaagaaaatttgttctgatacgtcagtttaatagtgtaaaaaattcttcgtactattaaagttgaaatattcaacagtaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="4678" stop="6100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4980" g_stop="5110" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="143" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5111" i_stop="5413" i_length="303">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5414" g_stop="5797" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="527" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="528" polyA_stop="545"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E309025" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4980" e_stop="5110"/>
          <exon e_start="5414" e_stop="5797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATTCCCACTTCGAACGAGTAATCGAGCATTTAAAGCAAATTGAAGCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAAATGGTGGGGAATCAGGAGATCTGTGTATGAATCTTCTCTTGCTTCTCATCATCTTTCTTGTATATCTTTCTCTATGTGGGGGGTGGGGGGTGCAGGCTCTTATCTATTATGTTTCTTTTCTATAATGTTATATCTGCACAATGCATCACTATACTAATGCACATGTCATTATGATGTTTTTTTGTGCTATTACCTGGCTGGAGAAATTAAGGAGGAATGTGGCTACGTGGTTTGAGTAGACTATTATCAGGGTTGTTTTCGAGAAATTATCTTTTTATCCCTCTTTTTTCTTTCCGATGCCTGATTCTTGATAATGATTGAGCACAGCAGGAAGAAGCGAAGTCTGAACATGTTGAGGAAAAAGAAGTTGAAACAGTGGAGCAAGATGTTCCGAATCCAGTTAAGGAGTATGATGATGATGAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGAATGATGTTAAGTTTCAGTTAATCTATATTCTCCTGCCACAAGGGATCTTTACATCTCTTTTGTTAAATTCCTTTTTGAACTCGGGCCAACAATATGGTGTACTTGAGATAATCATTTCAACGGAATATAGCAAAAGGGCCAAGTGTTATTAATATGTAGTGACAATGTAAAGAAAATTTGTTCTGATACGTCAGTTTAATAGTGTAAAAAATTCTTCGTACTATTAAAGTTGAAATATTCAACAGT</genome_strand>
        <mrna_strand>ATCATTCCCACTTCGAACGAGTAATCGAGCATTTAAAGCAAATTGAAGCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAAATGGTGGGGAATCAGGAGATCTGT...............................................................................................................................................................................................................................................................................................................CAGGAAGAAGCGAAGTCTGAACATGTTGAGGAAAAAGAAGTTGAAACAGTGGAGCAAGATGTTCCGAATCCAGTTAAGGAGTATGATGATGATGAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGAATGATGTTAAGTTTCAGTTAATCTATATTCTCCTGCCACAAGGGATCTTTACATCTCTTTTGTTAAATTCCTTTTTGAACTCGGGCCAACAATATGGTGTACTTGAGATAATCATTTCAACGGAATATAGCAAAAGGGCCAAGTGTTATTAATATGTAGTGACAATGTAAAGAAAATTTGTTCTGATACGTCAGTTTAATAGTGTAAAAAATTCTTCGTACTATTAAAGTTGAAATATTCAACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E214588" ref_strand="+" ref_description="SGN-E214588 [cLEC-79-N6]">
      <seq>tttagaccgcgtcctcttgacattcacaagaagttgccaattttaaaatctatcaaggattttgaggatgatgattcccagactaatacacggaaccttatccttcgtctcgctgctgaagctacagaaaatgaggttggaggcaattttgtataaactagaagttttagatcacaaggcccgagaaagagcaggagttatagcaaatacgcttggatcgccagttcctgtgcttctaagttttgatgctgctgttgaggccttgcaatctttatccattaaatatggagtattccagtctatttataattactggaaggataagcgggagcggttgcagaagccttctcttcggcgtttgcagccgcctccaccagttaacgacacgaatccttataatgtatttaggccaagggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="7018" stop="12560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7318" g_stop="7452" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7453" i_stop="9677" i_length="2225">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9678" g_stop="9801" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="259" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9802" i_stop="10378" i_length="577">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.273" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10379" g_stop="10444" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="325" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10445" i_stop="11383" i_length="939">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11384" g_stop="11422" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="364" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11423" i_stop="12205" i_length="783">
            <donor d_prob="0.973" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12206" g_stop="12260" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="419" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E214588" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7318" e_stop="7452"/>
          <exon e_start="9678" e_stop="9801"/>
          <exon e_start="10379" e_stop="10444"/>
          <exon e_start="11384" e_stop="11422"/>
          <exon e_start="12206" e_stop="12260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGACCGCGTCCTCTTGACATTCACAAGAAGTTGCCAATTTTAAAATCTATCAAGGATTTTGAGGATGATGATTCCCAGACTAATACACGGAACCTTATCCTTCGTCTCGCTGCTGAAGCTACAGAAAATGAGGTTTTTGAGCTCAATCCTTGTAGTTTTATGCTATATTGCATTGCATGGACTATCTGTGATATAAATTTGCATGCATAAATTCTTCATTCACTTAAACTAACTCTTCTATGTTTTATAAGTTAACTTTCCTAAGTTAAAATTTTCGTAACGTACTTGGTCTTAATCATGACACACATTACTGCTGTGCTGGTGAATTGTGCCTGTACTTAAGCTTATTATATTGGACAATAATTTATTCTCCAGGTGCCACAAACTTCTAGCAAGAAGTTGGCTCCTGAAATACCTACTCCTGAGTATGTGATTGTGGATACATATGAAAGAGATTATTCGCCCACCTTTGGGCAGCCAACATCATATATACATGCTAGAGGAGGTACGTCTAGTGTACTGTACTGGGGGCGAATGTTGTTAGTATCATCTGAGTAGTAACTTCTGAAACTTTGTTAAAATTTAATGTAGCTCGGGCTGAGATTGGAGAATTTGTTGAGTATGATCTTGACAATGAGGATGAAGATTGGCTTCAAGAGTTCAACAGAGAAAGAAAAGTTCTTGCAGCTGAAAAGTAAAAAAAATCTTAAACCATGCTTCTGTATGCCTACTGTGTTACATTAATACACACATCCACATACACAACTTTCCTTGAGACATTTGCTCTTTGTTTCTTCCCTATGGTTGGTTCATCCTTTATTTTGTTTCCTCTCGTCGCTGCTAGTTGGATGTGTTTGCATTCACACGGAGAGTATGTTTGCATTCACATGGAGAGTAATTAAATCTGGTACTTGTGGGAATTATTTTAAAGAATAGAAGTAAGAGACGCTAAAATCTACCTGAGGGTAATTGATATATATCATAGCTGTATTGCATAAGTTCTTATCACACTATGGCACAATGCACCAGAGACTAGAGAGCTTAGCTAACCAAATACTCCAGGTATAAGGAAGAGAGGAAGGTGGACAGAAGCCATTCTGTAGTCATAGCACAACTCCTTTAAACTATACACTTAGCTAATTAGCCAAACCGTAAAGTACCTAGGACAATCCATGCTTATACTGAACGAAAACCACCTAGTGAAGGATAAGCTCAAATAATGGTGCTTTCCTGAAGAGGTCTCAAGAAAATCATTTCCATTATTATATCATGCTAGCGTGCTTGGATGAAGCAAACTGACATTACCTCTGAGGTAACCCAAGCAAATCTTGTGCTGTCTTAACATGGAGAGACAGGTCACTTGTGACATTGTAACATTGATGGATTTGATGTTAAAGACTTAAAAGCTTACAAACTTGGGTCTCTTCTTAGACCTTACTTGACCTTCCACTGATATCTTAGTTGGATTTCAGTTTTTTTGTCTGTTAGTCCTTTTGTGACATGTTGGTTTCCACATGGAAGACACTATTTCCTTTATGCTGAAGTTGCAAAAGTTGTGACATTACCTTTTATCCTAGAAGCATACAAACTTAGGGGTCGTTTGGTTGGTAAACAAGTTAGACATGGATTATAATGTGGGGATTGAATAATGATGGAATCATTTAGTGGATATGCTTTTATTGGTAGATGTTTGTTTCTTTTAACTAAAATTGGATATTGGGGTATAATAAAATACATATGTTTGGTTTTAAACTAGGTAAATTGGGATATACTTTTTTTCCGATTTTAAACTTGACTTTTCTAAAGGACTACAGGAGAAGAGTTTTGGAGAAGGGCATCTAAATCATTTTGGTGTTTTGTCCTGGTATTGTTATCCCACATTGAATGTGGTAGAAAAATAATGCCAGAATTGCGGTATAATCCCAGAATCAAAAGTTCAACCATAAGCGAGATAAGATGATCCTTTTTTTTCCCTGGACTGTTATCCTTATTAATAAAGCAGACAACCCCTTAAGTTTTATTCTAGTATATCCTTCCGACACCATAAGCTAAGTACTGGACCTGAGTTTTGCTTCTTAGAGCTGTCATGTTTGTTACTCTCCTACTTTCTTGCACTCCTTTCTCCATTTTCCTCGAGCTACTTTTAGTCCCTTTAATTATTTTATCTTCAATCTGTATTTGGCTTCAGGTTTCTGATGCTGAGTGTAATTTGTCTATGCTCTATGTATTTCATCCTGTTCTTTTCCTCTCAATATGATGTGCTCTTTTTTCTATAAGGAATACAATATGCCTAATTGAAGACTTGAATTTTGATTATTGATCATAGGCAAAAAAATCACTTTTGTCTCCTGATACAGGTTGGAGGCAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAGGTAAAAGCTAGCTCTTCATGTTAGTCTGTTGATTTTGCAAGTTTAACTTTGTCCTTCATGTTGCATTGTTATTTAGAGAATCCACTTTGCAATTTTTGATATTGTTTACTCTAATAAGAACTCCATATGCTGTAGTTGTAACTTATATGTGGACCTACTGGAGAATTCATGTTCATTATTGCAAGACTGTTGCAAGCTACTTAAAAACTAGAAAATCTTCCATCATTATACGAAAACTAGAGCCATTTCCTGCTCTTTGCAATCCTTTTCGCTTTTGCATTATCTAGCCTCTATTCACGAAAAACTAGCCTCTATTCTCTGAAAATGCTCAAGTTCTGCTATTATAAGATACATGGATTCTTTATGTTTGTTGCTGACATTGGATGTGTTCGTTTCTTCAGTTTGAATAACATAACTTGTACATGATCTTTGTACATCTTTCTTCTTTTTGGATATTCCTATTCTTAGCTGTTTTGATTTTTTTACTTTCTGAGATTTTTTGCTTCTCTGAATGTAGTGAGGTTCAGTTTTCCTACTTATTCATCATTTGTTTCCCTTTTTATGGTTTTAAATCCAGGCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAGGTATGTACTTCTCACCACTTTCGGTTGTAAAATTGGTTAATACACATGTTCATCAGAAGAAAAAATATGACAAACACGCTGTTAATGGGGTTCCATGTCGAGACATTCAACAAGTTATGTTGGGAGATTCTTGTTTGTTTGCCTCCACCAAAATCTGAAAATTTGCTTTCACACTACTGATATATTCACAAAGCTTATATTCTACTTAATAAGCCTGTTTCCCTGTTATTCTCTTACTCATAACCTTTCTTGTAAGTTTTTGAGGTCATCTCTTAATATAAGCGCTTCCATCTAAAGGCGCTAAAGCATAAATGTATTTTCTTCTTATTTTGTAACCTTTTATGGGGCAAAGTTCGGAGAGTGGGTGGGATGTCTGTAACTATTTAATTTGACATTTGTTAGCAGATGTTACTTCTGATATGGAACTTGTTGAAGGTTGTGGAATTGCTGATTTTGATCGAAGACTACGTTGCTGGATTTGTCGTCATTAAGAATCTGACCTTTTCATTTACATCTTGAGACCTCGTTCTTTTGCCCTGTATTCTGAATAAGTTTGTATTTTTTAAAATTGGAAAATAGTTTGAGGATGGGTTATGAGCAACCCATCATGTGTGTTCCATAGGTTTGTATAGATTTGTTTTTTTCCAGAGATGATGAGATTAATCGTAAATCAATTTGAGAATGTGTCCCCATTGCATATCAGCAAATGTTTATGCGGAGTAAACAATGAAAAATTATCCTCCATCTTGTATGTTACAGATTTTAATTGGAAATTCGGGATCACATTGATTGTTCTTTATGTATAATATTCAATATGAAAGCTCCAAATGCTTGATTACTAGAGCCTTGATGTTGCTTCTTATCAGAATTAATAGAGTCGATACATGTGTGGTCCTTAAAGATGAATCCTCATGCAACCTTATGTTTTTTTTAAATTAGCGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAGGTCAGTTCAACAACCCTAATTTGTAAATTCAGCTGAGTGATTTGAATTATTATTCTAACACTAATAGTTATTTGATTTTTTCAACATGCCCTCTCGCATACGATCCTTTTTCTTTTTTCATGGGCCAAGTACATAGAAATTCTTTATGATATTGGATGGTGGTGAAACTCGAATCCGGGCTCTGCAACTATGTTGAACTGCGTGACTATCTCATTTAAAAGGTTTAGATGAGATAGTCAGACACTTCAACATTGTATCAAGCCAGGCCCGCCCAATTGTTGTTTCACTGATGTTGGGCCCCCATATTATCTTGTCCACTCTCCAGTTGGCAGACCTGGGTGCGTGGGTGGTTTTGAATTGTCCTACATTCATGGGTAGGAGGCAATTTGTCTCCTTATATAGTCTTTGGGCAATCCTTATCTCTTGAGCTAGCTTTTTAGGTTGCATTAGGCCCAATTTCCATTTTTTCAGTTACTACTATATAGTTGTTGATTTAATCTTATTCTGTAGTTGTCTTGTCTGCTTCTTTATTCTGTTTTCTGAACCACTTTTGGATTTGGATCTGCAGTCATGTTTGACTGGTACTTTCAGCAATAACTCTTACATTCTACCTAGACCATTGGGTGATCAATGATTACTATGTTTTCTCCATACTAATGAAAAAATGTGCAAATCGTGTCATTATTATAGCATGATGAAGATTTGATGTTCTTTGGTTTTATATGACTGCATTTTCTGCTGTTGATTATCTACTGACTACTGGTCATTGCTGTCATTTTGAAGCCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGA</genome_strand>
        <mrna_strand>TTTAGACCGCGTCCTCTTGACATTCACAAGAAGTTGCCAATTTTAAAATCTATCAAGGATTTTGAGGATGATGATTCCCAGACTAATACACGGAACCTTATCCTTCGTCTCGCTGCTGAAGCTACAGAAAATGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGGCAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E709050" ref_strand="+" ref_description="SGN-E709050 [FA42CC01]">
      <seq>ttgacaatgaggccgtagattggcttcaagagttcaacagagaaagaaaagttcttgcagctgaaaagttggaggcaattttgtataaactagaagttttagatcacaaggcccgagaaagagcaggagttatagcaaatacgcttggatcgccagttcctgtgcttctaagttttgatgctgctgttgaggccttgcaatctttatccattaaatatggagtattccagtctatttataattactggaaggataagcgggagcggttgcagaagccttctcttcggcgtttgcagccgcctccaccagttaacgacacgaatccttataatgtatttaggccaagggagaaggcccacagacttcatacaagaaggatgcaaaggagggaaaacaatgcacagtcatttgaaaagcttcgccaggttaggcgcaaccttgaccaagcaaagatcattcttgaggctctcatcaagagagaggagaagaagcgagaggttattgatagtgagattagcctccagagacttcaaatgaaacacaagaatgaaactgagctttttgtggatgcctttactctgcctgaatttccttccttcccaagtaaggttggttcaagtgaggacgaatttgtcgactctgatgatccttctactagtcgtcggcatatagcacaaaacattaccttcccggacccgaagctggtgactgcttctcctagaatcatgaagcgagagttcaagcgaagaaatgtgtcccatggatggctctataaattggatccaaatgagcccactctgctgtttacgaaacctctggatccacccaaattgtcagctgcaggcattata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="7648" stop="14740"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7948" g_stop="8014" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8015" i_stop="9677" i_length="1663">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9678" g_stop="9801" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="191" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9802" i_stop="10378" i_length="577">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.273" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10379" g_stop="10444" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="257" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10445" i_stop="11383" i_length="939">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11384" g_stop="11422" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="296" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11423" i_stop="12205" i_length="783">
            <donor d_prob="0.973" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12206" g_stop="12286" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="377" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12287" i_stop="12405" i_length="119">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="12406" g_stop="12453" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="425" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="12454" i_stop="13139" i_length="686">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="13140" g_stop="13190" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="476" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="13191" i_stop="13354" i_length="164">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="13355" g_stop="13423" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="545" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="13424" i_stop="13967" i_length="544">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="13968" g_stop="14201" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="779" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="14202" i_stop="14368" i_length="167">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="14369" g_stop="14440" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="780" r_stop="851" r_length="72" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E709050" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>851</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709050" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7948" e_stop="8014"/>
          <exon e_start="9678" e_stop="9801"/>
          <exon e_start="10379" e_stop="10444"/>
          <exon e_start="11384" e_stop="11422"/>
          <exon e_start="12206" e_stop="12286"/>
          <exon e_start="12406" e_stop="12453"/>
          <exon e_start="13140" e_stop="13190"/>
          <exon e_start="13355" e_stop="13423"/>
          <exon e_start="13968" e_stop="14201"/>
          <exon e_start="14369" e_stop="14440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACAATGAGGATGAAGATTGGCTTCAAGAGTTCAACAGAGAAAGAAAAGTTCTTGCAGCTGAAAAGTAAAAAAAATCTTAAACCATGCTTCTGTATGCCTACTGTGTTACATTAATACACACATCCACATACACAACTTTCCTTGAGACATTTGCTCTTTGTTTCTTCCCTATGGTTGGTTCATCCTTTATTTTGTTTCCTCTCGTCGCTGCTAGTTGGATGTGTTTGCATTCACACGGAGAGTATGTTTGCATTCACATGGAGAGTAATTAAATCTGGTACTTGTGGGAATTATTTTAAAGAATAGAAGTAAGAGACGCTAAAATCTACCTGAGGGTAATTGATATATATCATAGCTGTATTGCATAAGTTCTTATCACACTATGGCACAATGCACCAGAGACTAGAGAGCTTAGCTAACCAAATACTCCAGGTATAAGGAAGAGAGGAAGGTGGACAGAAGCCATTCTGTAGTCATAGCACAACTCCTTTAAACTATACACTTAGCTAATTAGCCAAACCGTAAAGTACCTAGGACAATCCATGCTTATACTGAACGAAAACCACCTAGTGAAGGATAAGCTCAAATAATGGTGCTTTCCTGAAGAGGTCTCAAGAAAATCATTTCCATTATTATATCATGCTAGCGTGCTTGGATGAAGCAAACTGACATTACCTCTGAGGTAACCCAAGCAAATCTTGTGCTGTCTTAACATGGAGAGACAGGTCACTTGTGACATTGTAACATTGATGGATTTGATGTTAAAGACTTAAAAGCTTACAAACTTGGGTCTCTTCTTAGACCTTACTTGACCTTCCACTGATATCTTAGTTGGATTTCAGTTTTTTTGTCTGTTAGTCCTTTTGTGACATGTTGGTTTCCACATGGAAGACACTATTTCCTTTATGCTGAAGTTGCAAAAGTTGTGACATTACCTTTTATCCTAGAAGCATACAAACTTAGGGGTCGTTTGGTTGGTAAACAAGTTAGACATGGATTATAATGTGGGGATTGAATAATGATGGAATCATTTAGTGGATATGCTTTTATTGGTAGATGTTTGTTTCTTTTAACTAAAATTGGATATTGGGGTATAATAAAATACATATGTTTGGTTTTAAACTAGGTAAATTGGGATATACTTTTTTTCCGATTTTAAACTTGACTTTTCTAAAGGACTACAGGAGAAGAGTTTTGGAGAAGGGCATCTAAATCATTTTGGTGTTTTGTCCTGGTATTGTTATCCCACATTGAATGTGGTAGAAAAATAATGCCAGAATTGCGGTATAATCCCAGAATCAAAAGTTCAACCATAAGCGAGATAAGATGATCCTTTTTTTTCCCTGGACTGTTATCCTTATTAATAAAGCAGACAACCCCTTAAGTTTTATTCTAGTATATCCTTCCGACACCATAAGCTAAGTACTGGACCTGAGTTTTGCTTCTTAGAGCTGTCATGTTTGTTACTCTCCTACTTTCTTGCACTCCTTTCTCCATTTTCCTCGAGCTACTTTTAGTCCCTTTAATTATTTTATCTTCAATCTGTATTTGGCTTCAGGTTTCTGATGCTGAGTGTAATTTGTCTATGCTCTATGTATTTCATCCTGTTCTTTTCCTCTCAATATGATGTGCTCTTTTTTCTATAAGGAATACAATATGCCTAATTGAAGACTTGAATTTTGATTATTGATCATAGGCAAAAAAATCACTTTTGTCTCCTGATACAGGTTGGAGGCAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAGGTAAAAGCTAGCTCTTCATGTTAGTCTGTTGATTTTGCAAGTTTAACTTTGTCCTTCATGTTGCATTGTTATTTAGAGAATCCACTTTGCAATTTTTGATATTGTTTACTCTAATAAGAACTCCATATGCTGTAGTTGTAACTTATATGTGGACCTACTGGAGAATTCATGTTCATTATTGCAAGACTGTTGCAAGCTACTTAAAAACTAGAAAATCTTCCATCATTATACGAAAACTAGAGCCATTTCCTGCTCTTTGCAATCCTTTTCGCTTTTGCATTATCTAGCCTCTATTCACGAAAAACTAGCCTCTATTCTCTGAAAATGCTCAAGTTCTGCTATTATAAGATACATGGATTCTTTATGTTTGTTGCTGACATTGGATGTGTTCGTTTCTTCAGTTTGAATAACATAACTTGTACATGATCTTTGTACATCTTTCTTCTTTTTGGATATTCCTATTCTTAGCTGTTTTGATTTTTTTACTTTCTGAGATTTTTTGCTTCTCTGAATGTAGTGAGGTTCAGTTTTCCTACTTATTCATCATTTGTTTCCCTTTTTATGGTTTTAAATCCAGGCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAGGTATGTACTTCTCACCACTTTCGGTTGTAAAATTGGTTAATACACATGTTCATCAGAAGAAAAAATATGACAAACACGCTGTTAATGGGGTTCCATGTCGAGACATTCAACAAGTTATGTTGGGAGATTCTTGTTTGTTTGCCTCCACCAAAATCTGAAAATTTGCTTTCACACTACTGATATATTCACAAAGCTTATATTCTACTTAATAAGCCTGTTTCCCTGTTATTCTCTTACTCATAACCTTTCTTGTAAGTTTTTGAGGTCATCTCTTAATATAAGCGCTTCCATCTAAAGGCGCTAAAGCATAAATGTATTTTCTTCTTATTTTGTAACCTTTTATGGGGCAAAGTTCGGAGAGTGGGTGGGATGTCTGTAACTATTTAATTTGACATTTGTTAGCAGATGTTACTTCTGATATGGAACTTGTTGAAGGTTGTGGAATTGCTGATTTTGATCGAAGACTACGTTGCTGGATTTGTCGTCATTAAGAATCTGACCTTTTCATTTACATCTTGAGACCTCGTTCTTTTGCCCTGTATTCTGAATAAGTTTGTATTTTTTAAAATTGGAAAATAGTTTGAGGATGGGTTATGAGCAACCCATCATGTGTGTTCCATAGGTTTGTATAGATTTGTTTTTTTCCAGAGATGATGAGATTAATCGTAAATCAATTTGAGAATGTGTCCCCATTGCATATCAGCAAATGTTTATGCGGAGTAAACAATGAAAAATTATCCTCCATCTTGTATGTTACAGATTTTAATTGGAAATTCGGGATCACATTGATTGTTCTTTATGTATAATATTCAATATGAAAGCTCCAAATGCTTGATTACTAGAGCCTTGATGTTGCTTCTTATCAGAATTAATAGAGTCGATACATGTGTGGTCCTTAAAGATGAATCCTCATGCAACCTTATGTTTTTTTTAAATTAGCGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAGGTCAGTTCAACAACCCTAATTTGTAAATTCAGCTGAGTGATTTGAATTATTATTCTAACACTAATAGTTATTTGATTTTTTCAACATGCCCTCTCGCATACGATCCTTTTTCTTTTTTCATGGGCCAAGTACATAGAAATTCTTTATGATATTGGATGGTGGTGAAACTCGAATCCGGGCTCTGCAACTATGTTGAACTGCGTGACTATCTCATTTAAAAGGTTTAGATGAGATAGTCAGACACTTCAACATTGTATCAAGCCAGGCCCGCCCAATTGTTGTTTCACTGATGTTGGGCCCCCATATTATCTTGTCCACTCTCCAGTTGGCAGACCTGGGTGCGTGGGTGGTTTTGAATTGTCCTACATTCATGGGTAGGAGGCAATTTGTCTCCTTATATAGTCTTTGGGCAATCCTTATCTCTTGAGCTAGCTTTTTAGGTTGCATTAGGCCCAATTTCCATTTTTTCAGTTACTACTATATAGTTGTTGATTTAATCTTATTCTGTAGTTGTCTTGTCTGCTTCTTTATTCTGTTTTCTGAACCACTTTTGGATTTGGATCTGCAGTCATGTTTGACTGGTACTTTCAGCAATAACTCTTACATTCTACCTAGACCATTGGGTGATCAATGATTACTATGTTTTCTCCATACTAATGAAAAAATGTGCAAATCGTGTCATTATTATAGCATGATGAAGATTTGATGTTCTTTGGTTTTATATGACTGCATTTTCTGCTGTTGATTATCTACTGACTACTGGTCATTGCTGTCATTTTGAAGCCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGACTTCATACAAGAAGGGTATTCAATTCTATGACTGTCCTAATCTTGTTGTGTAAAATTTCTAATTGACAGTTTAATTCTTGTGGAATTTTGTTTGTGTTAACGGAGAACCTGTGGCTTCCTTTTTTCTTTAACAGATGCAAAGGAGGGAAAACAATGCACAGTCATTTGAAAAGCTTCGCCAGGTGAATCCAAGGACGAATTTTGCTCTTATTTCTTGATCTATCCTCTAAAATGAAATACCCATCTACCTATGATTGTCTATCTTGACAGTTCCCTGTGTATTGGTCAAGGTGATCCTTTCATGTCATAGTTGCTTATCATCATCCCAGTCCAGCTGCACCAGAAGCATAAGCTTCTTTGCCACCAGATGTGTATACTATCCATCATTTCCTTTCATTCAGATATAACAGCTTTGCATTAGGTTCGGCATGAATTGCTGAAACAATGCCAAATTATTGCAAATGTTGCACATCAATTTCTCTTTTCCCTTTAGTGGATCTAGACATCCATTTTAAGATGATGATGACTATTCAATCACATATTGCCTTCTTGCCAACTGCAAGTTGTCACATCATTTCTTATTTGAAGATTGTGTTGTATCAGTCTCTCTTGTTTGCTTAATGAACTTCTTGTATGTAGGAATACGGTGATGTGACAGTGATGTGTGGTAGTTAAATACCTAATAATAATGATCTTAGAATCTAACAGCTGTTCCCTACATGATTTTTCTGTGGGACATAGCCTCTATACTTGGCGAGCGTGATAAACTGCATTAGTAAAGCTTCTCTGGCTATAAATGAGTTGATGCTACATCTGATTTGGTCCTTTTCTCATAGGAAATTTACTTGTATCATTTCACATTGTCCAGGTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAGGTTTGTATTTCTTAACAGTTACTAATATATATATTGGTGCATTGGATAAATTGTGGGTATGAATGGGATACTGGACTTCACGAGCAAGGTTCAGTCCCAATACCAATTGATTCCTTATGATCTGCACAGTCGACAGTCATTTTCCCTGATCTTATTGTGTGCAGAGAGAGGAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAGGTATGCGAGGAGGGTTACTATCTAGTCTATCCTCTTCGTTTTTTCACCATTTTTACTATATGATACTTATCAGCAGTAATAGTAGTATCATTAGATAATATTCTCTCTTATTCTGTCTCGACTGGGAAATAGATTATCTACTTTCTGTTTTATTGTGATTGCATTTAAGATTGACAAATTGAGGTTTTACTAGAATCTTAAATGCAGCTCCGGAGCAATTTCTAATTGCTGTGCTGAAAAGAAATTCAGCTGCCGACTAAAAGTTGGTTTACGGAATAGAGTGATAGTAGTTTTTTTCTTTAAAAAAATAAATGGAAAAACTAGTAGGTTGGAGAGGGAATAGCTCTTTATTGCAATAGATAACTTAAATGTGGGTGCAGATTTTCCTTGTCAAAAATGTCCTGCTTAGTCATATTACAATATCATTAGGCCTTTTCAAGTACCAAATGTAACTGGTTATTCTCCTCAGGGTCAGGGCTGTGTTTTCGGGTTATTCATTTTGAATGTTACATGAATTAATTAATCTACTTTTCTTGGATTCCAGAATGAAACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGAATCATGAAGCGAGAGTTCAAGCGAAGAAATGTGTCCCATGGATGGCTCTATAAATTGGTGCTTTCCTACTCTCTAAAGTTGCTTTCCTATACTGTCTCACTTTATCACACATGTTTTCAAATGTAGTGTTCGAATTACTTTGCATGTGAGTTGAAAGCTACTTGAACTTAATCCATTTGTTAATATTAAACTGAAGACGAGACTGCATAAATTGGGTTATACAGGATCCAAATGAGCCAACTCTGCTGTTTACGAAACCTCTGGATCCAGCCAAATTGTCAGCTGCAGGCATTATA</genome_strand>
        <mrna_strand>TTGACAATGAGGCCGTAGATTGGCTTCAAGAGTTCAACAGAGAAAGAAAAGTTCTTGCAGCTGAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGGCAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGACTTCATACAAGAAGG.......................................................................................................................ATGCAAAGGAGGGAAAACAATGCACAGTCATTTGAAAAGCTTCGCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAG....................................................................................................................................................................AGAGAGGAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAAACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGAATCATGAAGCGAGAGTTCAAGCGAAGAAATGTGTCCCATGGATGGCTCTATAAATTG.......................................................................................................................................................................GATCCAAATGAGCCCACTCTGCTGTTTACGAAACCTCTGGATCCACCCAAATTGTCAGCTGCAGGCATTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E325633" ref_strand="+" ref_description="SGN-E325633 [cTOC-15-P20]">
      <seq>agagagagcaggagttatagcaaatacgcttggatcgccagttcctgtgcttctaagttttgatgctgctgttgaggccttgcaatctttatccattaaatatggagtattccagtctatttataattactggaaggataagcgggagcggttgcagaagccttctcttcggcgtttgcagccgcctccaccagttaacgacacgaatccttataatgtatttaggccaagggagaaggcccacagacttcatacaagaaggatgcaaaggagggaaaacaatgcacagtcatttgaaaagcttcgccaggttaggcgcaaccttgaccaagcaaagatcattcttgaggctctcatcaagagagaggagaagaagcgagaggttattgatagtgagattagcctccagagacttcaaatgaaacacaagaatgaaactgagctttttgtggatgcctttactctgcctgaatttccttccttcccaagtaaggttggttcaagtgaggacgaatttgtcgactctgatgatccttctactagtcgtcggcatatagcacaaaacattaccttcccggacccgaagctggtgactgcttctcctagatcatgaagcgagagtcaagcgaagaatgtgtcccatggatggctctataaattggatccaatgagccaactctgctgtttacgaaacctctggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="9426" stop="14711"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9726" g_stop="9801" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9802" i_stop="10378" i_length="577">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.273" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10379" g_stop="10444" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="142" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10445" i_stop="11383" i_length="939">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11384" g_stop="11422" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="181" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11423" i_stop="12205" i_length="783">
            <donor d_prob="0.973" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12206" g_stop="12286" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="262" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12287" i_stop="12405" i_length="119">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12406" g_stop="12453" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="310" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12454" i_stop="13139" i_length="686">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="13140" g_stop="13190" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="361" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="13191" i_stop="13354" i_length="164">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="13355" g_stop="13423" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="430" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="13424" i_stop="13967" i_length="544">
            <donor d_prob="0.898" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="13968" g_stop="14201" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="661" r_length="231" r_score="0.987"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="14202" i_stop="14368" i_length="167">
            <donor d_prob="0.887" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="14369" g_stop="14411" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="703" r_length="42" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E325633" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325633" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9726" e_stop="9801"/>
          <exon e_start="10379" e_stop="10444"/>
          <exon e_start="11384" e_stop="11422"/>
          <exon e_start="12206" e_stop="12286"/>
          <exon e_start="12406" e_stop="12453"/>
          <exon e_start="13140" e_stop="13190"/>
          <exon e_start="13355" e_stop="13423"/>
          <exon e_start="13968" e_stop="14201"/>
          <exon e_start="14369" e_stop="14411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAGGTAAAAGCTAGCTCTTCATGTTAGTCTGTTGATTTTGCAAGTTTAACTTTGTCCTTCATGTTGCATTGTTATTTAGAGAATCCACTTTGCAATTTTTGATATTGTTTACTCTAATAAGAACTCCATATGCTGTAGTTGTAACTTATATGTGGACCTACTGGAGAATTCATGTTCATTATTGCAAGACTGTTGCAAGCTACTTAAAAACTAGAAAATCTTCCATCATTATACGAAAACTAGAGCCATTTCCTGCTCTTTGCAATCCTTTTCGCTTTTGCATTATCTAGCCTCTATTCACGAAAAACTAGCCTCTATTCTCTGAAAATGCTCAAGTTCTGCTATTATAAGATACATGGATTCTTTATGTTTGTTGCTGACATTGGATGTGTTCGTTTCTTCAGTTTGAATAACATAACTTGTACATGATCTTTGTACATCTTTCTTCTTTTTGGATATTCCTATTCTTAGCTGTTTTGATTTTTTTACTTTCTGAGATTTTTTGCTTCTCTGAATGTAGTGAGGTTCAGTTTTCCTACTTATTCATCATTTGTTTCCCTTTTTATGGTTTTAAATCCAGGCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAGGTATGTACTTCTCACCACTTTCGGTTGTAAAATTGGTTAATACACATGTTCATCAGAAGAAAAAATATGACAAACACGCTGTTAATGGGGTTCCATGTCGAGACATTCAACAAGTTATGTTGGGAGATTCTTGTTTGTTTGCCTCCACCAAAATCTGAAAATTTGCTTTCACACTACTGATATATTCACAAAGCTTATATTCTACTTAATAAGCCTGTTTCCCTGTTATTCTCTTACTCATAACCTTTCTTGTAAGTTTTTGAGGTCATCTCTTAATATAAGCGCTTCCATCTAAAGGCGCTAAAGCATAAATGTATTTTCTTCTTATTTTGTAACCTTTTATGGGGCAAAGTTCGGAGAGTGGGTGGGATGTCTGTAACTATTTAATTTGACATTTGTTAGCAGATGTTACTTCTGATATGGAACTTGTTGAAGGTTGTGGAATTGCTGATTTTGATCGAAGACTACGTTGCTGGATTTGTCGTCATTAAGAATCTGACCTTTTCATTTACATCTTGAGACCTCGTTCTTTTGCCCTGTATTCTGAATAAGTTTGTATTTTTTAAAATTGGAAAATAGTTTGAGGATGGGTTATGAGCAACCCATCATGTGTGTTCCATAGGTTTGTATAGATTTGTTTTTTTCCAGAGATGATGAGATTAATCGTAAATCAATTTGAGAATGTGTCCCCATTGCATATCAGCAAATGTTTATGCGGAGTAAACAATGAAAAATTATCCTCCATCTTGTATGTTACAGATTTTAATTGGAAATTCGGGATCACATTGATTGTTCTTTATGTATAATATTCAATATGAAAGCTCCAAATGCTTGATTACTAGAGCCTTGATGTTGCTTCTTATCAGAATTAATAGAGTCGATACATGTGTGGTCCTTAAAGATGAATCCTCATGCAACCTTATGTTTTTTTTAAATTAGCGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAGGTCAGTTCAACAACCCTAATTTGTAAATTCAGCTGAGTGATTTGAATTATTATTCTAACACTAATAGTTATTTGATTTTTTCAACATGCCCTCTCGCATACGATCCTTTTTCTTTTTTCATGGGCCAAGTACATAGAAATTCTTTATGATATTGGATGGTGGTGAAACTCGAATCCGGGCTCTGCAACTATGTTGAACTGCGTGACTATCTCATTTAAAAGGTTTAGATGAGATAGTCAGACACTTCAACATTGTATCAAGCCAGGCCCGCCCAATTGTTGTTTCACTGATGTTGGGCCCCCATATTATCTTGTCCACTCTCCAGTTGGCAGACCTGGGTGCGTGGGTGGTTTTGAATTGTCCTACATTCATGGGTAGGAGGCAATTTGTCTCCTTATATAGTCTTTGGGCAATCCTTATCTCTTGAGCTAGCTTTTTAGGTTGCATTAGGCCCAATTTCCATTTTTTCAGTTACTACTATATAGTTGTTGATTTAATCTTATTCTGTAGTTGTCTTGTCTGCTTCTTTATTCTGTTTTCTGAACCACTTTTGGATTTGGATCTGCAGTCATGTTTGACTGGTACTTTCAGCAATAACTCTTACATTCTACCTAGACCATTGGGTGATCAATGATTACTATGTTTTCTCCATACTAATGAAAAAATGTGCAAATCGTGTCATTATTATAGCATGATGAAGATTTGATGTTCTTTGGTTTTATATGACTGCATTTTCTGCTGTTGATTATCTACTGACTACTGGTCATTGCTGTCATTTTGAAGCCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGACTTCATACAAGAAGGGTATTCAATTCTATGACTGTCCTAATCTTGTTGTGTAAAATTTCTAATTGACAGTTTAATTCTTGTGGAATTTTGTTTGTGTTAACGGAGAACCTGTGGCTTCCTTTTTTCTTTAACAGATGCAAAGGAGGGAAAACAATGCACAGTCATTTGAAAAGCTTCGCCAGGTGAATCCAAGGACGAATTTTGCTCTTATTTCTTGATCTATCCTCTAAAATGAAATACCCATCTACCTATGATTGTCTATCTTGACAGTTCCCTGTGTATTGGTCAAGGTGATCCTTTCATGTCATAGTTGCTTATCATCATCCCAGTCCAGCTGCACCAGAAGCATAAGCTTCTTTGCCACCAGATGTGTATACTATCCATCATTTCCTTTCATTCAGATATAACAGCTTTGCATTAGGTTCGGCATGAATTGCTGAAACAATGCCAAATTATTGCAAATGTTGCACATCAATTTCTCTTTTCCCTTTAGTGGATCTAGACATCCATTTTAAGATGATGATGACTATTCAATCACATATTGCCTTCTTGCCAACTGCAAGTTGTCACATCATTTCTTATTTGAAGATTGTGTTGTATCAGTCTCTCTTGTTTGCTTAATGAACTTCTTGTATGTAGGAATACGGTGATGTGACAGTGATGTGTGGTAGTTAAATACCTAATAATAATGATCTTAGAATCTAACAGCTGTTCCCTACATGATTTTTCTGTGGGACATAGCCTCTATACTTGGCGAGCGTGATAAACTGCATTAGTAAAGCTTCTCTGGCTATAAATGAGTTGATGCTACATCTGATTTGGTCCTTTTCTCATAGGAAATTTACTTGTATCATTTCACATTGTCCAGGTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAGGTTTGTATTTCTTAACAGTTACTAATATATATATTGGTGCATTGGATAAATTGTGGGTATGAATGGGATACTGGACTTCACGAGCAAGGTTCAGTCCCAATACCAATTGATTCCTTATGATCTGCACAGTCGACAGTCATTTTCCCTGATCTTATTGTGTGCAGAGAGAGGAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAGGTATGCGAGGAGGGTTACTATCTAGTCTATCCTCTTCGTTTTTTCACCATTTTTACTATATGATACTTATCAGCAGTAATAGTAGTATCATTAGATAATATTCTCTCTTATTCTGTCTCGACTGGGAAATAGATTATCTACTTTCTGTTTTATTGTGATTGCATTTAAGATTGACAAATTGAGGTTTTACTAGAATCTTAAATGCAGCTCCGGAGCAATTTCTAATTGCTGTGCTGAAAAGAAATTCAGCTGCCGACTAAAAGTTGGTTTACGGAATAGAGTGATAGTAGTTTTTTTCTTTAAAAAAATAAATGGAAAAACTAGTAGGTTGGAGAGGGAATAGCTCTTTATTGCAATAGATAACTTAAATGTGGGTGCAGATTTTCCTTGTCAAAAATGTCCTGCTTAGTCATATTACAATATCATTAGGCCTTTTCAAGTACCAAATGTAACTGGTTATTCTCCTCAGGGTCAGGGCTGTGTTTTCGGGTTATTCATTTTGAATGTTACATGAATTAATTAATCTACTTTTCTTGGATTCCAGAATGAAACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGAATCATGAAGCGAGAGTTCAAGCGAAGAAATGTGTCCCATGGATGGCTCTATAAATTGGTGCTTTCCTACTCTCTAAAGTTGCTTTCCTATACTGTCTCACTTTATCACACATGTTTTCAAATGTAGTGTTCGAATTACTTTGCATGTGAGTTGAAAGCTACTTGAACTTAATCCATTTGTTAATATTAAACTGAAGACGAGACTGCATAAATTGGGTTATACAGGATCCAAATGAGCCAACTCTGCTGTTTACGAAACCTCTGGATC</genome_strand>
        <mrna_strand>AGAGAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGACTTCATACAAGAAGG.......................................................................................................................ATGCAAAGGAGGGAAAACAATGCACAGTCATTTGAAAAGCTTCGCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAG....................................................................................................................................................................AGAGAGGAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAAACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAG-ATCATGAAGCGAGAG-TCAAGCGAAG-AATGTGTCCCATGGATGGCTCTATAAATTG.......................................................................................................................................................................GATCC-AATGAGCCAACTCTGCTGTTTACGAAACCTCTGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267200" ref_strand="+" ref_description="SGN-E267200 [cLEI-4-G24]">
      <seq>aagaagcgagaggttattgatagtgagattagcctccagagacttcaaatgaaacacaaggtatgcgaggagggttactatctagtctatcctcttcgttttttcaccatttttactatatgatacttatcagcagtaatagtagtatcattagataatattctctcttattctgtctcgactgggaaatagattatctactttctgttttattgtgattgcatttaagattgacaaattgaggttttactagaatcttaaatgcagctccggagcaatttctaattgctgtgctgaaaagaaattcagctgccgactaaaagttggtttacggaatagagtgatagtagtttttttctttaaaaaaataaatggaaaaactagtaggttggagagggaatagctctttattgcaatagataacttaaatgtgggtgcagattttccttgtcaaaaatgtcctgcttagtcatattacaatatcattaggccttttcaagtaccaaatgtaactggttattctcctcagggtcagggctgtgttttcgggttattcattttgaatgttacatgaattaattaatctacttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="13064" stop="14256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13364" g_stop="13956" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="593" r_length="593" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E267200" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13364" e_stop="13956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAGGTATGCGAGGAGGGTTACTATCTAGTCTATCCTCTTCGTTTTTTCACCATTTTTACTATATGATACTTATCAGCAGTAATAGTAGTATCATTAGATAATATTCTCTCTTATTCTGTCTCGACTGGGAAATAGATTATCTACTTTCTGTTTTATTGTGATTGCATTTAAGATTGACAAATTGAGGTTTTACTAGAATCTTAAATGCAGCTCCGGAGCAATTTCTAATTGCTGTGCTGAAAAGAAATTCAGCTGCCGACTAAAAGTTGGTTTACGGAATAGAGTGATAGTAGTTTTTTTCTTTAAAAAAATAAATGGAAAAACTAGTAGGTTGGAGAGGGAATAGCTCTTTATTGCAATAGATAACTTAAATGTGGGTGCAGATTTTCCTTGTCAAAAATGTCCTGCTTAGTCATATTACAATATCATTAGGCCTTTTCAAGTACCAAATGTAACTGGTTATTCTCCTCAGGGTCAGGGCTGTGTTTTCGGGTTATTCATTTTGAATGTTACATGAATTAATTAATCTACTTTTC</genome_strand>
        <mrna_strand>AAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAGGTATGCGAGGAGGGTTACTATCTAGTCTATCCTCTTCGTTTTTTCACCATTTTTACTATATGATACTTATCAGCAGTAATAGTAGTATCATTAGATAATATTCTCTCTTATTCTGTCTCGACTGGGAAATAGATTATCTACTTTCTGTTTTATTGTGATTGCATTTAAGATTGACAAATTGAGGTTTTACTAGAATCTTAAATGCAGCTCCGGAGCAATTTCTAATTGCTGTGCTGAAAAGAAATTCAGCTGCCGACTAAAAGTTGGTTTACGGAATAGAGTGATAGTAGTTTTTTTCTTTAAAAAAATAAATGGAAAAACTAGTAGGTTGGAGAGGGAATAGCTCTTTATTGCAATAGATAACTTAAATGTGGGTGCAGATTTTCCTTGTCAAAAATGTCCTGCTTAGTCATATTACAATATCATTAGGCCTTTTCAAGTACCAAATGTAACTGGTTATTCTCCTCAGGGTCAGGGCTGTGTTTTCGGGTTATTCATTTTGAATGTTACATGAATTAATTAATCTACTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E710316" ref_strand="+" ref_description="SGN-E710316 [FA55AC03]">
      <seq>ctgatactgagctttttgtggatgcctttactctgcctgaatttccttccttcccaagtaaggttggttcaagtgaggacgaatttgtcgactctgatgatccttctactagtcgtcggcatatagcacaaaacattaccttcccggacccgaagctggtgactgcttctcctagaatcatgaagcgagagttcaagcgaagaaatgtgtcccatggatggctctataaattggatccaaatgagccaactctgctgtttacgaaacctctggatccagccaaattgtcagctgcaggcattatacctccaggttctccaacaccaaatggcctacctgctcacacatttagctttcgtggaaggatggggcgaggtggtcgtatcgtgtttgatagatggaatccactcagccatacacccatggattgcggtgatactttatatgttccaccgaaggctcgacattctgcacatcaatgacatgatcagcacttcatgagcttgtttctcaatccccttgaaagttgtatatgttgtatgatatttgcatggatgatgctaaagatggaaggggaaattttgaaccagtgataattgaagaaccaagtcctggagatgcacgtaccgattgttgaaggcaaatgtcataaaatgaatgcttaaagcatcgttttgcctcctggttatgtttttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="13670" stop="15133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13969" g_stop="14201" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14202" i_stop="14368" i_length="167">
            <donor d_prob="0.887" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14369" g_stop="14833" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="698" r_length="465" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E710316" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13969" e_stop="14201"/>
          <exon e_start="14369" e_stop="14833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGAATCATGAAGCGAGAGTTCAAGCGAAGAAATGTGTCCCATGGATGGCTCTATAAATTGGTGCTTTCCTACTCTCTAAAGTTGCTTTCCTATACTGTCTCACTTTATCACACATGTTTTCAAATGTAGTGTTCGAATTACTTTGCATGTGAGTTGAAAGCTACTTGAACTTAATCCATTTGTTAATATTAAACTGAAGACGAGACTGCATAAATTGGGTTATACAGGATCCAAATGAGCCAACTCTGCTGTTTACGAAACCTCTGGATCCAGCCAAATTGTCAGCTGCAGGCATTATACCTCCAGGTTCTCCAACACCAAATGGCCTACCTGCTCACACATTTAGCTTTCGTGGAAGGATGGGGCGAGGTGGTCGTATCGTGTTTGATAGATGGAATCCACTCAGCCATACACCCATGGATTGCGGTGATACTTTATATGTTCCACCGAAGGCTCGACATTCTGCACATCAATGACATGATCAGCACTTCATGAGCTTGTTTCTCAATCCCCTTGAAAGTTGTATATGTTGTATGATATTTGCATGGATGATGCTAAAGATGGAAGGGGAAATTTTGAACCAGTGATAATTGAAGAACCAAGTCCTGGAGATGCACGTACCGATTGTTGAAGGCAAATGTCATAAAATGAATGCTTAGAGCATCGTTTTGCCTCCTGTTTATGTTTTTGGG</genome_strand>
        <mrna_strand>CTGATACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGAATCATGAAGCGAGAGTTCAAGCGAAGAAATGTGTCCCATGGATGGCTCTATAAATTG.......................................................................................................................................................................GATCCAAATGAGCCAACTCTGCTGTTTACGAAACCTCTGGATCCAGCCAAATTGTCAGCTGCAGGCATTATACCTCCAGGTTCTCCAACACCAAATGGCCTACCTGCTCACACATTTAGCTTTCGTGGAAGGATGGGGCGAGGTGGTCGTATCGTGTTTGATAGATGGAATCCACTCAGCCATACACCCATGGATTGCGGTGATACTTTATATGTTCCACCGAAGGCTCGACATTCTGCACATCAATGACATGATCAGCACTTCATGAGCTTGTTTCTCAATCCCCTTGAAAGTTGTATATGTTGTATGATATTTGCATGGATGATGCTAAAGATGGAAGGGGAAATTTTGAACCAGTGATAATTGAAGAACCAAGTCCTGGAGATGCACGTACCGATTGTTGAAGGCAAATGTCATAAAATGAATGCTTAAAGCATCGTTTTGCCTCCTGGTTATGTTTTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E372379" ref_strand="+" ref_description="SGN-E372379 [TUS-30-P21]">
      <seq>actaaaaccctcaaaacccctttgtccattttacagttcttacagcatctccttctcaatagcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaagctgcactggaccggcctgatgaggaaggggacgaagataaagaggatgagttggtgaaggaagaagttatgaagaatatttcaatggaggtagtcagggacaagttgctacattacatacatcangaaatcccatatggcaattgaccatcgcctgatggactggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15204" stop="21689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15504" g_stop="16128" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16129" i_stop="21186" i_length="5058">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21187" g_stop="21245" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="684" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102">
            <donor d_prob="0.469" d_score="0.96"/>
            <acceptor a_prob="0.962" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21348" g_stop="21389" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="727" r_length="43" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E372379" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15504" e_stop="16128"/>
          <exon e_start="21187" e_stop="21245"/>
          <exon e_start="21348" e_stop="21389"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTGGGAATTATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGTGGATCTCTTCTTGATAGATTTCTATGCTTATTGTTATTGCTGGTTACTTGAGTTTATAATGACCTCTTTTCACAAAAAATAAGAAAGAAAAGTATACTAATGACTAGTTGCCAGTATTAGCTAAAATGGATTACATGCCAGATTGATAACGACTAGAAATTGCTAAATCTACTGCTCCTCTAGAAATGCTTGTGGACCAGTTCCCTTCAAATAGTTAGGACCCACTTAACCATCGAATAGAAAATGAAGATGCAAAGTTAGAGCTCTCATCCCACCAAGGTAATTCAAAGAAGAAAGACACCCAACTAAAGCTAGAAAATGAATGAAGCTTGCCTGTTAAAATACTTTTTGTTTTGTTGCTAAGTATAAAATTTTGAACAAGCATTAAGTTTTCAAGTACACAGTTCAACTACTCTGGATAAATTTTCATGTTTTATTGTTGTTGTTGCTATTCTATGAGTATAATGATGACTAATTTGTCAATAGTGGTGGTTAGTGATCAAAAGAGCAATGATATGCTTAAGTGGTTTAGCTCATATCTGGCTAAATAAATTTTTTTAAAAGAACAATTAGTGCCTCCTCTCCAGGGTTTTGGAGGATTCATATGGACAACCTCAGCTAGTATGAGATTGAGATGTAGTTGCTGCTGTTGTATTGTCTATAGAGTATACCTCATGAACTGTAACAACTCTTGTTTTACCCTAAACAAAATGATATTATATTATTATGGCATCTAATTCCTGCACTAGTCTTTAACTATGCGGTTGTTGTCTGATTTTTTCCCTTTCTGTAGGTTGGGACCAAAGTTTCTGCTGTATCACGGAAGACAAATACCACTACTCATGAAGTCTTAGGTGTGATGACTAAAGGGAAAACACAAATTGTGAGTGTACTTTGAATTACTAGGTTTCAGTTCCATTTTCCCTGATTGTTGATCTCCATTTCATTTTATCAGCTTTTTGTTGCTTGAGCTGCATCTATTTGCAAAAATGAATTCTAATCTCCAATATACAATAAATACATATATTTTTCATGGACTTTAGTTTCATGTATGATCACTGAACTTTACTCGCTGTATTGGTAAAGAGTTATGTAAAATAATTGGATTTTGTCCACTACAATAGTGAAGTCCCAAACTATCTTTTCTCACATCAAAGTGATTAAACTATGTTTGAATAGCTCAGAAAATCATTAAATATCCTGCTCAAATTAGACAACATGATAAAACAACAACCAATAACATACTCCTTGTAATCGCACAAGTGGGGTGTTGGAGGGTAGAGTGTAAGCAGAACAACCCTTGTAGAGATAGAGAAGTTGTTTCTGATAGACCCTCAGCTTAGAGCCTGCCAAACAAAAAATACAAATGACAGAAAATGAAAAATTCATCGTGTAAAGGCTTTGACTACTCATGTTTTACAATTAAACAAAAAAGTAAAAAAGATTACTTGGCACTGGGAATTTTGACCATCCAGTCAATTCTATTTTTTGAGCAATTCAGACATAGTTCAGTCAAAAAAAGAAAATGAAGAAAACAGCTTTGTGATTTTACTATTCTTTTGGATAAAGTGCCGTTACATTGATGTGACAAAAATATTGTTTTGCAACTTAACTGGTATACAGGGTACCCATACGTAAAACTGACCCACTAAATGGTCAAAAATTAGTTTTCTTGGACTTAGAGTAAGATTACCCAAGCTTGATGTCAGCCATCGTTCTTTTTGAAAAGGGGGTATGTACTCTTACCTGCAGCATCTTATCAACTGATTTTTTTTTTTCCTTTTTGAAGAACTTTTTTTTATTTTAAGGGAAAATTTTCACAAAAGAGAAAATAAGCAAATATATGACTACTAGCAAAAATGCCAAATCTTATGAGCTTATCTTGCAGGTTGAAGTATACTTTTTGGGTCTAAAATATATGGAGAGCAAAAGTTCTATATGTCTAATGAGTTCTTTCTGCAGTGTTTCTTTGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAAGTTAGTTTTTCTTCTTGCTTCAACTCCAAAAGTTCATATTTATGCAATAACTATATGCTCATCTCATGATATTATGTATGCAACATTGTTATCTGTAATTACTAGTAATATATGATTTAATAATAGAAGAAAAAATATCATAGGCTAAGATGTGTTTTGCTTGTTTAATCTGGATATGTTTGTCTAATTTTCAGATTTTCATCGTTAGGCGAGTTCACAGAAGAACGTAGATAGTGTTTTCCATAGTAGTTCTCTTACCCCAAGCCTGCATGCACTTACTTCCTATATTTTTGGACTAGATAGCTCTCTAATTGGTATACTAGCCCATGTCATATGGTAAGATGTGCTTTGCTTGTTTAATCTGGATATGTTTTGTCTATTTCATAGTTAGGCGAGTTCACAGAAGAAGGTAGATAGTGTTTCCACAGTACTACCCTTACCCCCAAGCCTGCATGTACTTATTTGCCTGTATTTTTGGACTAGATACCTCTCTGATTCATACACTAGTCAATGTCAATTTTATATCAGTGTTTTTATTAAGCATAAATCAAACAGTCCTATGCATACTTTTGCATTCACCATCATTAACAAGGTGCAAATCATATTAACATTTTAAAGGGGAATCTTAGTAGCTTAGTTGGTTGGTTACTCCCACCTTGTTGGTGAGGGTTCGATTCCCCACATTGAGATCCCCTCCCCTATTTCCCCTTCCCCTACCTCCAATTTTTCAAAAATAATTGAGAAAATATTAACATCTTAAATGTGCATAGCTCAAAATTTGCACATAATATAGGTGGAGGGAATAGAATTTCTGAATGATGATACACATCCTCTATGACTTACTCAAATAGATGGGCTTTGGCCTGTCCAATTTTCTTGCTCTGTAAATAAGATATTTATTGCAACCACAACAAACTCAGTGTAGAAGGCTGTATAAATGCTTTATAGAGGTAAGATTATAGGTCCAGAAGAGAAGTTCAGCTTGAAATATATCAATGATGTAACACCTGTGTTTTGCACGTCGAGGAAAGAAAACTACTTACTCCATCACAATCTTGTCATTATAGGCTTTTTGGCGGTTAGTGGACCATTTCTAAGTGAATTTTGTCCCTTTGAGCTTTTTGACAGTCAACTGATCAACCTTGAACTGAAATTTGACTTGGATAAAGCTCTTATATGCCGGTTGGGGTTTATTTTTTTGAAGATTCATCTTCAGTATCAAGATAATATGTGAAGTAATCTCATGGTCCAATTAATTTCCTGTCAAATTCGACTTCTGGGCCAATTTTTACCAACGGTTTTTGGTTTTTGTTCAAGGGTAAGCTTCTTTCCCTACACAAAAACATGATTCAGATTGTGTGTTAAGCCTTGATAAAAATTTTCTCGCTTTGATAGAGTAGGCTTCCACTTGGAATAGAAATGTGAGGACCTTCCAAGATCATTGTTGAGATTGGTTTGTCATTTGTGAGGACTTCCTGAGATGATTATTTACTTGTAGAATGTAGAATATGTAGCAGCTAGAGTAGGTTTCCTTTCTTCTTTGTAGTCATGTGATGTGCTATCTCCAAATGTCTGTCACTAGTTTCTCAAGGTGGGATGCTATTTATGTCTATCTAATCCTTCCTTTTCTTTTATATTAGAAACTTTTTTTTTAATTTGCAAATTCCAATCTAGGGTTATGATTTCCGAACTTCGTATATGTATATATGCTAGCAAAGCTCCAAATATTGAGTTTTTGGTGTGAACAGTTAAGTTCTGTGTCCTTTGAGCCAAATGAGAGGCTTTGGAATTTATTCTCCCCCCGGCATCACCTTAAGTAGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAGGTAATCTTTTACTTTTTCCTGTTATGGTATGTTATTTGGTACGAATGCTCATTATGGTGTTTGCTTTGTTGATTTATCCTTTATAGGTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAGGTATGTTCATGTCTGAGGCTCTGTGTTTGAGTGTGGTATTTTTACCCTTCTACATGTTATGTTTAAGTTGCACCTATAATTGATACACATACCACCTGCTCTTCTTTTTTTGGGGGGGGGGGGGGCAACTGCTAACTCAGTGATTCTGTCTACCTTTGGAATTTTTTGCTCCTTAAAGTTGCTTCTGCCTTATTCCTCCAAGTAATGGGGAGTGTAGTTTGAGCAAAAAACTGTAAGTGTTAGAGTGTAGTTAAAAGGTTCTTTCACGTTATATTATTTCTTGCTGGCACTTCTTTTAGTTATTAACTGCAGGCACTACTTTTTAAAGAGAGTGCATAGGGATGGGTTGCTTTGTTGTCTTGCATATATCATATTATACTTGTGTGAAGTTAAAAGGTTCTTTTAGTTATTTTATTTCTTGCTTTGATCTCTTTGTTAGTGCACTCAACCTCTCTTGTAATCTATCCACTAACTTAAGTGCTTAACTCGTATACCATGTTGTTTGTTATGCTTAGTCAGTGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAGGTACCCGTTGTCTTGTTTGTGCACTTTGAGGATGTGCTTTCTTTAACCAGCAGGCGACCAGCTTACTAAGCATGACAATGACCTGATAATTTGTTTATTTAGGAAATCCCATATGGC-ATTGACCATCGCCTGATGGACTGGAAG</genome_strand>
        <mrna_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAAGAATATTTCAATGGAGGTAGTCAGGGACAAGTTGCTACATTACATACATCAN......................................................................................................GAAATCCCATATGGCAATTGACCATCGCCTGATGGACTGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E372112" ref_strand="+" ref_description="SGN-E372112 [TUS-30-P22]">
      <seq>actaaaaccctcaaaacccctttgtccattttacagttcttacagcatctccttctcaatagcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaagctgcactggaccggcctgatgaggaaggggacgaagataaagaggatgagttggtgaaggaagaagttatgaagaatatttcaatggaggtagtcagggaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15204" stop="21523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15504" g_stop="16128" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16129" i_stop="16670" i_length="542">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16671" g_stop="16707" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="662" r_length="37" r_score="0.676"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E372112" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372112" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15504" e_stop="16128"/>
          <exon e_start="16671" e_stop="16707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTGGGAATTATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGTGGATCTCTTCTTGATAGATTTCTATGCTTATTGTTATTGCTGGTTACTTGAGTTTATAATGACCTCTTTTCACAAAAAATAAGAAAGAAAAGTATACTAATGACTAGTTGCCAGTATTAGCTAAAATGGATTACATGCCAGATTGATAACGACTAGAAATTGCTAAATCTACTGCTCCTCTAGAAATGCTTGTGGACCAGTTCCCTTCAAATAGTTAGGACCCACTTAACCATCGAATAGAAAATGAAGATGCAAAGTTAGAGCTCTCATCCCACCAAGGTAATTCAAAGAAGAAAGACACCCAACTAAAGCTAGAAAATGAATGAAGCTTGCCTGTTAAAATACTTTTTGTTTTGTTGCTAAGTATAAAATTTTGAACAAGCATTAAGTTTTCAAGTACACAGTTCAACTACTCTGGATAAATTTTCATGTTTTATTGTTGTTGTTGCTATTCTATGAGTATAATGATGACTAATTTGTCAATAGTGGTGGTTAGTGATCA</genome_strand>
        <mrna_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E372201" ref_strand="+" ref_description="SGN-E372201 [TUS-30-P20]">
      <seq>actaaaaccctcaaaacccctttgtccattttacagttcttacagcatctccttctcaatagcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaagctgcactggaccggcctgatgaggaaggggacgaagataaagaggatgagttggtgaaggaagaagttatgaagaatatttcaatggaggtagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15204" stop="21514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15504" g_stop="16128" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16129" i_stop="16670" i_length="542">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16671" g_stop="16698" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="626" r_stop="653" r_length="28" r_score="0.714"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E372201" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372201" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15504" e_stop="16128"/>
          <exon e_start="16671" e_stop="16698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTGGGAATTATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGTGGATCTCTTCTTGATAGATTTCTATGCTTATTGTTATTGCTGGTTACTTGAGTTTATAATGACCTCTTTTCACAAAAAATAAGAAAGAAAAGTATACTAATGACTAGTTGCCAGTATTAGCTAAAATGGATTACATGCCAGATTGATAACGACTAGAAATTGCTAAATCTACTGCTCCTCTAGAAATGCTTGTGGACCAGTTCCCTTCAAATAGTTAGGACCCACTTAACCATCGAATAGAAAATGAAGATGCAAAGTTAGAGCTCTCATCCCACCAAGGTAATTCAAAGAAGAAAGACACCCAACTAAAGCTAGAAAATGAATGAAGCTTGCCTGTTAAAATACTTTTTGTTTTGTTGCTAAGTATAAAATTTTGAACAAGCATTAAGTTTTCAAGTACACAGTTCAACTACTCTGGATAAATTTTCATGTTTTATTGTTGTTGTTGCTATTCTATGAGTATAATGATGACTAATTTGTCAATAGTGGTGGT</genome_strand>
        <mrna_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAAGAATATTTCAATGGAGGTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E289173" ref_strand="+" ref_description="SGN-E289173 [cLES-18-D16]">
      <seq>actaaaaccctcaaaacccctttgtccattttacagttcttacagcatctccttctcaatagcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15204" stop="16236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15504" g_stop="15936" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E289173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15504" e_stop="15936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAAT</genome_strand>
        <mrna_strand>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E359149" ref_strand="+" ref_description="SGN-E359149 [cLHT-11-E13]">
      <seq>gaggaaacccctttgtccattttaccagttcttaccagcatctccttctcaatagcagtataaagcaagtgccaaaagctgattctgggttctttaaatctgcatgtttttcttgcatttggattttgcataagctcaaagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatcccagcaaaacccatttcaattcaatcgttttccttcgattttacctcagcccaacctcaagaagaccaccccacaagccctggtatttcttcctctgaagaagaggacccgtcttcctcagtcttcgacagttcgcaatacgatgtgggtatgggattaaacaatgatgttaattcagaaagcagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15217" stop="16346"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15513" g_stop="16046" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E359149" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15513" e_stop="16046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAAACCCCTTTGTCCATTTTA-CAGTTCTTA-CAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTG-CAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTA-CTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCT</genome_strand>
        <mrna_strand>GAGGAAACCCCTTTGTCCATTTTACCAGTTCTTACCAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCCAAAAGCTGATTCTGGGTTCTTTAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAAAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCCAGCAAAACCCATTTCAATTCAATCGTTTTCCTTCGATTTTACCTCAGCCCAACCTCAAGAAGACCACCCCACAAGCCCTGGTATTTCTTCCTCTGAAGAAGAGGACCCGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTATGGGATTAAACAATGATGTTAATTCAGAAAGCAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E319904" ref_strand="+" ref_description="SGN-E319904 [cTOB-12-F15]">
      <seq>tcaaaacccctttgtccattttacagttcttacagcatctccttctcaatagcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctaaaagctgcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15214" stop="16369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15514" g_stop="16069" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E319904" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15514" e_stop="16069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACT</genome_strand>
        <mrna_strand>TCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAAAAGCTGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E359187" ref_strand="+" ref_description="SGN-E359187 [cLHT-11-F3]">
      <seq>aacccctttgtccattttacagttcttacagcatctccttctcaatagcagtataaagcaagtgcaaaagctgattctgggttctttaaatctgcatgtttttcttgcatttggattttgcataagctcaaagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaatcgttttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtatttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtatgggattaaacaatgatgttaattcagaaagcagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaatctgcactggaccggcctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15218" stop="16383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15518" g_stop="16083" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="566" r_length="566" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E359187" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15518" e_stop="16083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATG</genome_strand>
        <mrna_strand>AACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTTAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAAAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAATCGTTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTATTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTATGGGATTAAACAATGATGTTAATTCAGAAAGCAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAATCTGCACTGGACCGGCCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E206246" ref_strand="+" ref_description="SGN-E206246 [cLEC-29-J8]">
      <seq>gtccattttacagttcttacagcatctccttctcaatagcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattctactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaagctgcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15227" stop="16369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15527" g_stop="16069" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E206246" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E206246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15527" e_stop="16069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACT</genome_strand>
        <mrna_strand>GTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTCTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E312202" ref_strand="+" ref_description="SGN-E312202 [cTOA-11-P21]">
      <seq>ttcttacagcatctccttctcaatagctttataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaagctgcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15240" stop="16369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15540" g_stop="16069" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E312202" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312202" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15540" e_stop="16069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACT</genome_strand>
        <mrna_strand>TTCTTACAGCATCTCCTTCTCAATAGCTTTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E321848" ref_strand="+" ref_description="SGN-E321848 [cTOB-29-A5]">
      <seq>ctcaatagcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaagctgcactggaccggcctgatgaggaaggggacgaagataaagaggatgagttggtgaaggaagaagatcaaatgtcattgagtgtgggaattattggagctccctatgctgggaaatcttcattgactaattacatgggtggtggatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15258" stop="16512"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15558" g_stop="16212" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E321848" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15558" e_stop="16212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTGGGAATTATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGTGGATCTC</genome_strand>
        <mrna_strand>CTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTGGGAATTATTGGAGCTCCCTATGCTGGGAAATCTTCATTGACTAATTACATGGGTGGTGGATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E321938" ref_strand="+" ref_description="SGN-E321938 [cTOB-29-A4]">
      <seq>gcagtataaagcaagtgcaaaagctgattctgggttcttaaaatctgcatgtttttcttgcatttggattttgcataagctcagagttgaaagatttgtgaaatcttgatatgaaagctttaagagttttgaggacattgaactcatcactatcttcaaatccaagcaaaacccatttcaattcaaccattttccttcgattttactcagcccaacctcaagaagaccaccccacaagcactggtgtttcttcctctgaagaagaggacacgtcttcctcagtcttcgacagttcgcaatacgatgtgggtgtgggattaaacaatgatgttaattcagaaagaagtgtaagctccacttgggacgagaaatatagggaaagagtgaaaactaaagtctttggtgaagacccttccgagattaagagttcaagaatcttgattaaagaagaggagaagagaagaagagctgctttattggctaggactcttctagaagctgcactggaccgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15265" stop="16376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15565" g_stop="16076" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E321938" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15565" e_stop="16076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGG</genome_strand>
        <mrna_strand>GCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E372111" ref_strand="+" ref_description="SGN-E372111 [TUS-30-P22](-)">
      <seq>agctgcactggaccggcctgatgaggaaggggacgaagataaagaggatgagttggtgaaggaagaagttatgaagaatatttcaatggaggtagtcagggaaaagttgctacattacatacatcaggaaatcccatatggcattgaccatcgcctgatggactggaaggagttacgtgatggttccctgagaattgaacaccatttgatcacacacaagataagccaacgcaagattctcgtaggaaagaatggttccaaaatagggagaataggtatcgaggcaaatgaagagttgagaacgatattcaagagaaatgtccatctaatgcttatggttagagtgaaatcatgaagatgaaagacaatatccttgttttgcatgtgtgtatatatagatgtgctccagtttttgtcccttaccaaagcagttctcagttgacacaataatttaccaaagcattaatccaaaattatattgttatgatacaaaatatggaagagaagcttgatttccctttacatgtgaatacactcatattcttttccatagatttaaggtcaaaattctagacattgtttgtattcatgttgggatcaattgtttgtaatgttggttcatttgcattgatatatttgaaccttcagttgctccatttcctcatctaaacaatgtactttttgattgttccattgccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15761" stop="22651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16061" g_stop="16128" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16129" i_stop="21186" i_length="5058">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21187" g_stop="21245" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="127" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102">
            <donor d_prob="0.469" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21348" g_stop="21487" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="267" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21918" g_stop="22350" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="700" r_length="433" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="701" polyA_stop="711"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E372111" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16061" e_stop="16128"/>
          <exon e_start="21187" e_stop="21245"/>
          <exon e_start="21348" e_stop="21487"/>
          <exon e_start="21918" e_stop="22350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTGGGAATTATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGTGGATCTCTTCTTGATAGATTTCTATGCTTATTGTTATTGCTGGTTACTTGAGTTTATAATGACCTCTTTTCACAAAAAATAAGAAAGAAAAGTATACTAATGACTAGTTGCCAGTATTAGCTAAAATGGATTACATGCCAGATTGATAACGACTAGAAATTGCTAAATCTACTGCTCCTCTAGAAATGCTTGTGGACCAGTTCCCTTCAAATAGTTAGGACCCACTTAACCATCGAATAGAAAATGAAGATGCAAAGTTAGAGCTCTCATCCCACCAAGGTAATTCAAAGAAGAAAGACACCCAACTAAAGCTAGAAAATGAATGAAGCTTGCCTGTTAAAATACTTTTTGTTTTGTTGCTAAGTATAAAATTTTGAACAAGCATTAAGTTTTCAAGTACACAGTTCAACTACTCTGGATAAATTTTCATGTTTTATTGTTGTTGTTGCTATTCTATGAGTATAATGATGACTAATTTGTCAATAGTGGTGGTTAGTGATCAAAAGAGCAATGATATGCTTAAGTGGTTTAGCTCATATCTGGCTAAATAAATTTTTTTAAAAGAACAATTAGTGCCTCCTCTCCAGGGTTTTGGAGGATTCATATGGACAACCTCAGCTAGTATGAGATTGAGATGTAGTTGCTGCTGTTGTATTGTCTATAGAGTATACCTCATGAACTGTAACAACTCTTGTTTTACCCTAAACAAAATGATATTATATTATTATGGCATCTAATTCCTGCACTAGTCTTTAACTATGCGGTTGTTGTCTGATTTTTTCCCTTTCTGTAGGTTGGGACCAAAGTTTCTGCTGTATCACGGAAGACAAATACCACTACTCATGAAGTCTTAGGTGTGATGACTAAAGGGAAAACACAAATTGTGAGTGTACTTTGAATTACTAGGTTTCAGTTCCATTTTCCCTGATTGTTGATCTCCATTTCATTTTATCAGCTTTTTGTTGCTTGAGCTGCATCTATTTGCAAAAATGAATTCTAATCTCCAATATACAATAAATACATATATTTTTCATGGACTTTAGTTTCATGTATGATCACTGAACTTTACTCGCTGTATTGGTAAAGAGTTATGTAAAATAATTGGATTTTGTCCACTACAATAGTGAAGTCCCAAACTATCTTTTCTCACATCAAAGTGATTAAACTATGTTTGAATAGCTCAGAAAATCATTAAATATCCTGCTCAAATTAGACAACATGATAAAACAACAACCAATAACATACTCCTTGTAATCGCACAAGTGGGGTGTTGGAGGGTAGAGTGTAAGCAGAACAACCCTTGTAGAGATAGAGAAGTTGTTTCTGATAGACCCTCAGCTTAGAGCCTGCCAAACAAAAAATACAAATGACAGAAAATGAAAAATTCATCGTGTAAAGGCTTTGACTACTCATGTTTTACAATTAAACAAAAAAGTAAAAAAGATTACTTGGCACTGGGAATTTTGACCATCCAGTCAATTCTATTTTTTGAGCAATTCAGACATAGTTCAGTCAAAAAAAGAAAATGAAGAAAACAGCTTTGTGATTTTACTATTCTTTTGGATAAAGTGCCGTTACATTGATGTGACAAAAATATTGTTTTGCAACTTAACTGGTATACAGGGTACCCATACGTAAAACTGACCCACTAAATGGTCAAAAATTAGTTTTCTTGGACTTAGAGTAAGATTACCCAAGCTTGATGTCAGCCATCGTTCTTTTTGAAAAGGGGGTATGTACTCTTACCTGCAGCATCTTATCAACTGATTTTTTTTTTTCCTTTTTGAAGAACTTTTTTTTATTTTAAGGGAAAATTTTCACAAAAGAGAAAATAAGCAAATATATGACTACTAGCAAAAATGCCAAATCTTATGAGCTTATCTTGCAGGTTGAAGTATACTTTTTGGGTCTAAAATATATGGAGAGCAAAAGTTCTATATGTCTAATGAGTTCTTTCTGCAGTGTTTCTTTGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAAGTTAGTTTTTCTTCTTGCTTCAACTCCAAAAGTTCATATTTATGCAATAACTATATGCTCATCTCATGATATTATGTATGCAACATTGTTATCTGTAATTACTAGTAATATATGATTTAATAATAGAAGAAAAAATATCATAGGCTAAGATGTGTTTTGCTTGTTTAATCTGGATATGTTTGTCTAATTTTCAGATTTTCATCGTTAGGCGAGTTCACAGAAGAACGTAGATAGTGTTTTCCATAGTAGTTCTCTTACCCCAAGCCTGCATGCACTTACTTCCTATATTTTTGGACTAGATAGCTCTCTAATTGGTATACTAGCCCATGTCATATGGTAAGATGTGCTTTGCTTGTTTAATCTGGATATGTTTTGTCTATTTCATAGTTAGGCGAGTTCACAGAAGAAGGTAGATAGTGTTTCCACAGTACTACCCTTACCCCCAAGCCTGCATGTACTTATTTGCCTGTATTTTTGGACTAGATACCTCTCTGATTCATACACTAGTCAATGTCAATTTTATATCAGTGTTTTTATTAAGCATAAATCAAACAGTCCTATGCATACTTTTGCATTCACCATCATTAACAAGGTGCAAATCATATTAACATTTTAAAGGGGAATCTTAGTAGCTTAGTTGGTTGGTTACTCCCACCTTGTTGGTGAGGGTTCGATTCCCCACATTGAGATCCCCTCCCCTATTTCCCCTTCCCCTACCTCCAATTTTTCAAAAATAATTGAGAAAATATTAACATCTTAAATGTGCATAGCTCAAAATTTGCACATAATATAGGTGGAGGGAATAGAATTTCTGAATGATGATACACATCCTCTATGACTTACTCAAATAGATGGGCTTTGGCCTGTCCAATTTTCTTGCTCTGTAAATAAGATATTTATTGCAACCACAACAAACTCAGTGTAGAAGGCTGTATAAATGCTTTATAGAGGTAAGATTATAGGTCCAGAAGAGAAGTTCAGCTTGAAATATATCAATGATGTAACACCTGTGTTTTGCACGTCGAGGAAAGAAAACTACTTACTCCATCACAATCTTGTCATTATAGGCTTTTTGGCGGTTAGTGGACCATTTCTAAGTGAATTTTGTCCCTTTGAGCTTTTTGACAGTCAACTGATCAACCTTGAACTGAAATTTGACTTGGATAAAGCTCTTATATGCCGGTTGGGGTTTATTTTTTTGAAGATTCATCTTCAGTATCAAGATAATATGTGAAGTAATCTCATGGTCCAATTAATTTCCTGTCAAATTCGACTTCTGGGCCAATTTTTACCAACGGTTTTTGGTTTTTGTTCAAGGGTAAGCTTCTTTCCCTACACAAAAACATGATTCAGATTGTGTGTTAAGCCTTGATAAAAATTTTCTCGCTTTGATAGAGTAGGCTTCCACTTGGAATAGAAATGTGAGGACCTTCCAAGATCATTGTTGAGATTGGTTTGTCATTTGTGAGGACTTCCTGAGATGATTATTTACTTGTAGAATGTAGAATATGTAGCAGCTAGAGTAGGTTTCCTTTCTTCTTTGTAGTCATGTGATGTGCTATCTCCAAATGTCTGTCACTAGTTTCTCAAGGTGGGATGCTATTTATGTCTATCTAATCCTTCCTTTTCTTTTATATTAGAAACTTTTTTTTTAATTTGCAAATTCCAATCTAGGGTTATGATTTCCGAACTTCGTATATGTATATATGCTAGCAAAGCTCCAAATATTGAGTTTTTGGTGTGAACAGTTAAGTTCTGTGTCCTTTGAGCCAAATGAGAGGCTTTGGAATTTATTCTCCCCCCGGCATCACCTTAAGTAGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAGGTAATCTTTTACTTTTTCCTGTTATGGTATGTTATTTGGTACGAATGCTCATTATGGTGTTTGCTTTGTTGATTTATCCTTTATAGGTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAGGTATGTTCATGTCTGAGGCTCTGTGTTTGAGTGTGGTATTTTTACCCTTCTACATGTTATGTTTAAGTTGCACCTATAATTGATACACATACCACCTGCTCTTCTTTTTTTGGGGGGGGGGGGGGCAACTGCTAACTCAGTGATTCTGTCTACCTTTGGAATTTTTTGCTCCTTAAAGTTGCTTCTGCCTTATTCCTCCAAGTAATGGGGAGTGTAGTTTGAGCAAAAAACTGTAAGTGTTAGAGTGTAGTTAAAAGGTTCTTTCACGTTATATTATTTCTTGCTGGCACTTCTTTTAGTTATTAACTGCAGGCACTACTTTTTAAAGAGAGTGCATAGGGATGGGTTGCTTTGTTGTCTTGCATATATCATATTATACTTGTGTGAAGTTAAAAGGTTCTTTTAGTTATTTTATTTCTTGCTTTGATCTCTTTGTTAGTGCACTCAACCTCTCTTGTAATCTATCCACTAACTTAAGTGCTTAACTCGTATACCATGTTGTTTGTTATGCTTAGTCAGTGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAGGTACCCGTTGTCTTGTTTGTGCACTTTGAGGATGTGCTTTCTTTAACCAGCAGGCGACCAGCTTACTAAGCATGACAATGACCTGATAATTTGTTTATTTAGGAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGTAAGTATCTTCCCGTTGAGCCTTACTCATCTCTCTCATTAATACTAGAAGAACTTCAAGTATCTGTCAATGACTTCTCTGCTTAATACCTGAACCATGAAACTCTGAAATTGGGATTAAGCGTAATGCATGATTCTATACAGAAGGACTGGACTTAGCTGATGTCACTTGAACCATCGCCCTAGATAAAATCTTTTCTTTCTCTATGTAATTTACTGATTTATGAACATTGAACACAGATGTTCAGATCTATAGTTCTGTTTTCTAATTCCTTGTCTTCAAAACTATGACTCTACGAAATGTTACAGAGAAAAAACATTTATAATTTAGGATTCAGTATTTGTTTAAGCAAATTGTCGTTTGACATAATTATCTCAGCTTGGGCAAAGTTGCTTTATTATAACGTTATGTATCTGTCGTTTTCATGCAGGAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCAC</genome_strand>
        <mrna_strand>AGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG......................................................................................................GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E330690" ref_strand="+" ref_description="SGN-E330690 [cTOD-8-O7]">
      <seq>tatcacggaaaacaaataccactactcatgaagtcttaggtgtgatgactaaagggaaaacacaaatttgtttctttgacactcccgggcttatgctaaagaaaagtggatttccttacaaagacataaaagcacgtattgaaagtgcatggaggtctattgatctatatgatgtactcattgtcatatttgatgctcataggcatcttaccaagcctgattctcgagtggtgaggttgattgagagaatgggctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="16721" stop="20653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17021" g_stop="17088" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17089" i_stop="18167" i_length="1079">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.658" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18168" g_stop="18313" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="214" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18314" i_stop="20310" i_length="1997">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20311" g_stop="20353" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="257" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E330690" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>257</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17021" e_stop="17088"/>
          <exon e_start="18168" e_stop="18313"/>
          <exon e_start="20311" e_stop="20353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCACGGAAGACAAATACCACTACTCATGAAGTCTTAGGTGTGATGACTAAAGGGAAAACACAAATTGTGAGTGTACTTTGAATTACTAGGTTTCAGTTCCATTTTCCCTGATTGTTGATCTCCATTTCATTTTATCAGCTTTTTGTTGCTTGAGCTGCATCTATTTGCAAAAATGAATTCTAATCTCCAATATACAATAAATACATATATTTTTCATGGACTTTAGTTTCATGTATGATCACTGAACTTTACTCGCTGTATTGGTAAAGAGTTATGTAAAATAATTGGATTTTGTCCACTACAATAGTGAAGTCCCAAACTATCTTTTCTCACATCAAAGTGATTAAACTATGTTTGAATAGCTCAGAAAATCATTAAATATCCTGCTCAAATTAGACAACATGATAAAACAACAACCAATAACATACTCCTTGTAATCGCACAAGTGGGGTGTTGGAGGGTAGAGTGTAAGCAGAACAACCCTTGTAGAGATAGAGAAGTTGTTTCTGATAGACCCTCAGCTTAGAGCCTGCCAAACAAAAAATACAAATGACAGAAAATGAAAAATTCATCGTGTAAAGGCTTTGACTACTCATGTTTTACAATTAAACAAAAAAGTAAAAAAGATTACTTGGCACTGGGAATTTTGACCATCCAGTCAATTCTATTTTTTGAGCAATTCAGACATAGTTCAGTCAAAAAAAGAAAATGAAGAAAACAGCTTTGTGATTTTACTATTCTTTTGGATAAAGTGCCGTTACATTGATGTGACAAAAATATTGTTTTGCAACTTAACTGGTATACAGGGTACCCATACGTAAAACTGACCCACTAAATGGTCAAAAATTAGTTTTCTTGGACTTAGAGTAAGATTACCCAAGCTTGATGTCAGCCATCGTTCTTTTTGAAAAGGGGGTATGTACTCTTACCTGCAGCATCTTATCAACTGATTTTTTTTTTTCCTTTTTGAAGAACTTTTTTTTATTTTAAGGGAAAATTTTCACAAAAGAGAAAATAAGCAAATATATGACTACTAGCAAAAATGCCAAATCTTATGAGCTTATCTTGCAGGTTGAAGTATACTTTTTGGGTCTAAAATATATGGAGAGCAAAAGTTCTATATGTCTAATGAGTTCTTTCTGCAGTGTTTCTTTGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAAGTTAGTTTTTCTTCTTGCTTCAACTCCAAAAGTTCATATTTATGCAATAACTATATGCTCATCTCATGATATTATGTATGCAACATTGTTATCTGTAATTACTAGTAATATATGATTTAATAATAGAAGAAAAAATATCATAGGCTAAGATGTGTTTTGCTTGTTTAATCTGGATATGTTTGTCTAATTTTCAGATTTTCATCGTTAGGCGAGTTCACAGAAGAACGTAGATAGTGTTTTCCATAGTAGTTCTCTTACCCCAAGCCTGCATGCACTTACTTCCTATATTTTTGGACTAGATAGCTCTCTAATTGGTATACTAGCCCATGTCATATGGTAAGATGTGCTTTGCTTGTTTAATCTGGATATGTTTTGTCTATTTCATAGTTAGGCGAGTTCACAGAAGAAGGTAGATAGTGTTTCCACAGTACTACCCTTACCCCCAAGCCTGCATGTACTTATTTGCCTGTATTTTTGGACTAGATACCTCTCTGATTCATACACTAGTCAATGTCAATTTTATATCAGTGTTTTTATTAAGCATAAATCAAACAGTCCTATGCATACTTTTGCATTCACCATCATTAACAAGGTGCAAATCATATTAACATTTTAAAGGGGAATCTTAGTAGCTTAGTTGGTTGGTTACTCCCACCTTGTTGGTGAGGGTTCGATTCCCCACATTGAGATCCCCTCCCCTATTTCCCCTTCCCCTACCTCCAATTTTTCAAAAATAATTGAGAAAATATTAACATCTTAAATGTGCATAGCTCAAAATTTGCACATAATATAGGTGGAGGGAATAGAATTTCTGAATGATGATACACATCCTCTATGACTTACTCAAATAGATGGGCTTTGGCCTGTCCAATTTTCTTGCTCTGTAAATAAGATATTTATTGCAACCACAACAAACTCAGTGTAGAAGGCTGTATAAATGCTTTATAGAGGTAAGATTATAGGTCCAGAAGAGAAGTTCAGCTTGAAATATATCAATGATGTAACACCTGTGTTTTGCACGTCGAGGAAAGAAAACTACTTACTCCATCACAATCTTGTCATTATAGGCTTTTTGGCGGTTAGTGGACCATTTCTAAGTGAATTTTGTCCCTTTGAGCTTTTTGACAGTCAACTGATCAACCTTGAACTGAAATTTGACTTGGATAAAGCTCTTATATGCCGGTTGGGGTTTATTTTTTTGAAGATTCATCTTCAGTATCAAGATAATATGTGAAGTAATCTCATGGTCCAATTAATTTCCTGTCAAATTCGACTTCTGGGCCAATTTTTACCAACGGTTTTTGGTTTTTGTTCAAGGGTAAGCTTCTTTCCCTACACAAAAACATGATTCAGATTGTGTGTTAAGCCTTGATAAAAATTTTCTCGCTTTGATAGAGTAGGCTTCCACTTGGAATAGAAATGTGAGGACCTTCCAAGATCATTGTTGAGATTGGTTTGTCATTTGTGAGGACTTCCTGAGATGATTATTTACTTGTAGAATGTAGAATATGTAGCAGCTAGAGTAGGTTTCCTTTCTTCTTTGTAGTCATGTGATGTGCTATCTCCAAATGTCTGTCACTAGTTTCTCAAGGTGGGATGCTATTTATGTCTATCTAATCCTTCCTTTTCTTTTATATTAGAAACTTTTTTTTTAATTTGCAAATTCCAATCTAGGGTTATGATTTCCGAACTTCGTATATGTATATATGCTAGCAAAGCTCCAAATATTGAGTTTTTGGTGTGAACAGTTAAGTTCTGTGTCCTTTGAGCCAAATGAGAGGCTTTGGAATTTATTCTCCCCCCGGCATCACCTTAAGTAGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCT</genome_strand>
        <mrna_strand>TATCACGGAAAACAAATACCACTACTCATGAAGTCTTAGGTGTGATGACTAAAGGGAAAACACAAATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCTTTGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E203298" ref_strand="+" ref_description="SGN-E203298 [cLEB-3-F3]">
      <seq>gcacgagcccgggcttatgctaaagaaaagtggatttccttacaaagacataaaagcacgtattgaaagtgcatggaggtctattgatctatatgatgtactcattgtcatatttgatgctcataggcatcttaccaagttagtttttcttcttgcttcaactccaaaagttcatatttatgcaataactatatgctcatctcatgatattatgtatgcaacattgttatctgtaattactagtaatatatgatttaataatagaagaaaaaatatcataggctaagatgtgttttgcttggttaatctggatatgtttgtctaattttcagattttcatcgttaggcgagttcacagaagaacgtagatagtgttttccatagtagttctcttaccccaagcctgcatgcacttacttcctatatttttggactagatagctctctaattggtatactagcccatgtcatatggtaagatgtgctttgcttgtttaatctggatatgttttgtctatttcatagttaggcgagttcacagaagaaggtagatagtgtttccacagtactacccttacccccaagcctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="17883" stop="19066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18176" g_stop="18766" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E203298" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18176" e_stop="18766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAAGTTAGTTTTTCTTCTTGCTTCAACTCCAAAAGTTCATATTTATGCAATAACTATATGCTCATCTCATGATATTATGTATGCAACATTGTTATCTGTAATTACTAGTAATATATGATTTAATAATAGAAGAAAAAATATCATAGGCTAAGATGTGTTTTGCTTGTTTAATCTGGATATGTTTGTCTAATTTTCAGATTTTCATCGTTAGGCGAGTTCACAGAAGAACGTAGATAGTGTTTTCCATAGTAGTTCTCTTACCCCAAGCCTGCATGCACTTACTTCCTATATTTTTGGACTAGATAGCTCTCTAATTGGTATACTAGCCCATGTCATATGGTAAGATGTGCTTTGCTTGTTTAATCTGGATATGTTTTGTCTATTTCATAGTTAGGCGAGTTCACAGAAGAAGGTAGATAGTGTTTCCACAGTACTACCCTTACCCCCAAGCCTGCA</genome_strand>
        <mrna_strand>GCACGAGCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAAGTTAGTTTTTCTTCTTGCTTCAACTCCAAAAGTTCATATTTATGCAATAACTATATGCTCATCTCATGATATTATGTATGCAACATTGTTATCTGTAATTACTAGTAATATATGATTTAATAATAGAAGAAAAAATATCATAGGCTAAGATGTGTTTTGCTTGGTTAATCTGGATATGTTTGTCTAATTTTCAGATTTTCATCGTTAGGCGAGTTCACAGAAGAACGTAGATAGTGTTTTCCATAGTAGTTCTCTTACCCCAAGCCTGCATGCACTTACTTCCTATATTTTTGGACTAGATAGCTCTCTAATTGGTATACTAGCCCATGTCATATGGTAAGATGTGCTTTGCTTGTTTAATCTGGATATGTTTTGTCTATTTCATAGTTAGGCGAGTTCACAGAAGAAGGTAGATAGTGTTTCCACAGTACTACCCTTACCCCCAAGCCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703037" ref_strand="+" ref_description="SGN-E703037 [FA20BE09]">
      <seq>ttgatctatatgatgtactcattgtcatatttgatgctcataggcatcttaccaagcctgattctcgagtggtgaggttgattgagagaatgggctctgaggctaatccaaatcagaaacgcttactgtgcatcaataaagttgacctaatcgagaaaaagaaagacttgttgaaagttgttgaggaattcaaagaccttcctggatatgaaaggtgctttacggtatccggactaaagggcgctggagtgaaagatctaactaaatacttgatggagcagtcagtgaaaagaccgtgggatgaagatccatttgtcatgagtgaagaagttatgaagaatatttcaatggaggtagtcagggaaaagttgctacattacatacatcaggaaatcccatatggcattgaccatcgcctgatggactggaaggagttacgtgatggttccctgagaattgaacaccatttgatcacacacaagataagccaacgcaagattctcgtaggaaagaatggttccaaaatagggagaataggtatcgaggcaaatgaagagttgagaacgatattcaagagaaatgtccatctaatgcttatggttagagtgaaatcatgaagatgaaagacaatatccttgttttgcatgtgtgtatatatagatgtgctccagtttttgtcccttaccaaagcagttctcagttgacacaataatttaccaaagcattaatccaaaattatattgttatgatacaaaatatggaagagaagcttgatttccctttacatgtgaatacactcatattcttttccatagatttaaggtcaaaattctagacattgtttgtattcatgttgggatcaattgtttgtaatgttggttcatttgcattgatatatttgaaccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="17959" stop="22596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18259" g_stop="18313" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18314" i_stop="20310" i_length="1997">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20311" g_stop="20469" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="214" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20470" i_stop="20555" i_length="86">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20556" g_stop="20622" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="281" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20623" i_stop="21137" i_length="515">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21138" g_stop="21245" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="389" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102">
            <donor d_prob="0.469" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21348" g_stop="21487" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="529" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21918" g_stop="22296" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="908" r_length="379" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E703037" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>908</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18259" e_stop="18313"/>
          <exon e_start="20311" e_stop="20469"/>
          <exon e_start="20556" e_stop="20622"/>
          <exon e_start="21138" e_stop="21245"/>
          <exon e_start="21348" e_stop="21487"/>
          <exon e_start="21918" e_stop="22296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAAGTTAGTTTTTCTTCTTGCTTCAACTCCAAAAGTTCATATTTATGCAATAACTATATGCTCATCTCATGATATTATGTATGCAACATTGTTATCTGTAATTACTAGTAATATATGATTTAATAATAGAAGAAAAAATATCATAGGCTAAGATGTGTTTTGCTTGTTTAATCTGGATATGTTTGTCTAATTTTCAGATTTTCATCGTTAGGCGAGTTCACAGAAGAACGTAGATAGTGTTTTCCATAGTAGTTCTCTTACCCCAAGCCTGCATGCACTTACTTCCTATATTTTTGGACTAGATAGCTCTCTAATTGGTATACTAGCCCATGTCATATGGTAAGATGTGCTTTGCTTGTTTAATCTGGATATGTTTTGTCTATTTCATAGTTAGGCGAGTTCACAGAAGAAGGTAGATAGTGTTTCCACAGTACTACCCTTACCCCCAAGCCTGCATGTACTTATTTGCCTGTATTTTTGGACTAGATACCTCTCTGATTCATACACTAGTCAATGTCAATTTTATATCAGTGTTTTTATTAAGCATAAATCAAACAGTCCTATGCATACTTTTGCATTCACCATCATTAACAAGGTGCAAATCATATTAACATTTTAAAGGGGAATCTTAGTAGCTTAGTTGGTTGGTTACTCCCACCTTGTTGGTGAGGGTTCGATTCCCCACATTGAGATCCCCTCCCCTATTTCCCCTTCCCCTACCTCCAATTTTTCAAAAATAATTGAGAAAATATTAACATCTTAAATGTGCATAGCTCAAAATTTGCACATAATATAGGTGGAGGGAATAGAATTTCTGAATGATGATACACATCCTCTATGACTTACTCAAATAGATGGGCTTTGGCCTGTCCAATTTTCTTGCTCTGTAAATAAGATATTTATTGCAACCACAACAAACTCAGTGTAGAAGGCTGTATAAATGCTTTATAGAGGTAAGATTATAGGTCCAGAAGAGAAGTTCAGCTTGAAATATATCAATGATGTAACACCTGTGTTTTGCACGTCGAGGAAAGAAAACTACTTACTCCATCACAATCTTGTCATTATAGGCTTTTTGGCGGTTAGTGGACCATTTCTAAGTGAATTTTGTCCCTTTGAGCTTTTTGACAGTCAACTGATCAACCTTGAACTGAAATTTGACTTGGATAAAGCTCTTATATGCCGGTTGGGGTTTATTTTTTTGAAGATTCATCTTCAGTATCAAGATAATATGTGAAGTAATCTCATGGTCCAATTAATTTCCTGTCAAATTCGACTTCTGGGCCAATTTTTACCAACGGTTTTTGGTTTTTGTTCAAGGGTAAGCTTCTTTCCCTACACAAAAACATGATTCAGATTGTGTGTTAAGCCTTGATAAAAATTTTCTCGCTTTGATAGAGTAGGCTTCCACTTGGAATAGAAATGTGAGGACCTTCCAAGATCATTGTTGAGATTGGTTTGTCATTTGTGAGGACTTCCTGAGATGATTATTTACTTGTAGAATGTAGAATATGTAGCAGCTAGAGTAGGTTTCCTTTCTTCTTTGTAGTCATGTGATGTGCTATCTCCAAATGTCTGTCACTAGTTTCTCAAGGTGGGATGCTATTTATGTCTATCTAATCCTTCCTTTTCTTTTATATTAGAAACTTTTTTTTTAATTTGCAAATTCCAATCTAGGGTTATGATTTCCGAACTTCGTATATGTATATATGCTAGCAAAGCTCCAAATATTGAGTTTTTGGTGTGAACAGTTAAGTTCTGTGTCCTTTGAGCCAAATGAGAGGCTTTGGAATTTATTCTCCCCCCGGCATCACCTTAAGTAGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAGGTAATCTTTTACTTTTTCCTGTTATGGTATGTTATTTGGTACGAATGCTCATTATGGTGTTTGCTTTGTTGATTTATCCTTTATAGGTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAGGTATGTTCATGTCTGAGGCTCTGTGTTTGAGTGTGGTATTTTTACCCTTCTACATGTTATGTTTAAGTTGCACCTATAATTGATACACATACCACCTGCTCTTCTTTTTTTGGGGGGGGGGGGGGCAACTGCTAACTCAGTGATTCTGTCTACCTTTGGAATTTTTTGCTCCTTAAAGTTGCTTCTGCCTTATTCCTCCAAGTAATGGGGAGTGTAGTTTGAGCAAAAAACTGTAAGTGTTAGAGTGTAGTTAAAAGGTTCTTTCACGTTATATTATTTCTTGCTGGCACTTCTTTTAGTTATTAACTGCAGGCACTACTTTTTAAAGAGAGTGCATAGGGATGGGTTGCTTTGTTGTCTTGCATATATCATATTATACTTGTGTGAAGTTAAAAGGTTCTTTTAGTTATTTTATTTCTTGCTTTGATCTCTTTGTTAGTGCACTCAACCTCTCTTGTAATCTATCCACTAACTTAAGTGCTTAACTCGTATACCATGTTGTTTGTTATGCTTAGTCAGTGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAGGTACCCGTTGTCTTGTTTGTGCACTTTGAGGATGTGCTTTCTTTAACCAGCAGGCGACCAGCTTACTAAGCATGACAATGACCTGATAATTTGTTTATTTAGGAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGTAAGTATCTTCCCGTTGAGCCTTACTCATCTCTCTCATTAATACTAGAAGAACTTCAAGTATCTGTCAATGACTTCTCTGCTTAATACCTGAACCATGAAACTCTGAAATTGGGATTAAGCGTAATGCATGATTCTATACAGAAGGACTGGACTTAGCTGATGTCACTTGAACCATCGCCCTAGATAAAATCTTTTCTTTCTCTATGTAATTTACTGATTTATGAACATTGAACACAGATGTTCAGATCTATAGTTCTGTTTTCTAATTCCTTGTCTTCAAAACTATGACTCTACGAAATGTTACAGAGAAAAAACATTTATAATTTAGGATTCAGTATTTGTTTAAGCAAATTGTCGTTTGACATAATTATCTCAGCTTGGGCAAAGTTGCTTTATTATAACGTTATGTATCTGTCGTTTTCATGCAGGAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTC</genome_strand>
        <mrna_strand>TTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAG......................................................................................GTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG......................................................................................................GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E254592" ref_strand="+" ref_description="SGN-E254592 [cLEG-29-J18]">
      <seq>agctctgttcagtgaagataggtatcggtttccatgtttaaaatgaagtaaacttatcgagaaaaaagtattgtagagaggactggaggatgcacatataactgcatcttatagcaactaagtagattcatctgaattttgctggcattatttcttctgtctaattttttgatatataggcctgattctcgagtggtgaggttgattgagagaatgggctctgaggctaatccaaatcagaaacgcttactgtgcatcaataaagttgacctaatcgagaaaaagaaagacttgttgaaagttgttgaggaattcaaagaccttcctggatatgaaaggtgctttacggtatccggactaaagggcgctggagtgaaagatctaactaaatacttgatggagcagtgaaaagaccgtgggatgaagatccatttgtcatgagtgaagaagttatgaagaatatttcaatggaggtagtcagggaaaagttgctacattacatacatcaggaaatcccatatggcattgaccatcgcctgatggactggaaggagttacgtgatggttccctgagaattgaacaccatttgatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="19832" stop="21732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20132" g_stop="20469" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20470" i_stop="20555" i_length="86">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20556" g_stop="20622" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="405" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20623" i_stop="21141" i_length="519">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21142" g_stop="21245" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="509" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102">
            <donor d_prob="0.469" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21348" g_stop="21432" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="594" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E254592" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254592" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20132" e_stop="20469"/>
          <exon e_start="20556" e_stop="20622"/>
          <exon e_start="21142" e_stop="21245"/>
          <exon e_start="21348" e_stop="21432"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAGGTAATCTTTTACTTTTTCCTGTTATGGTATGTTATTTGGTACGAATGCTCATTATGGTGTTTGCTTTGTTGATTTATCCTTTATAGGTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAGGTATGTTCATGTCTGAGGCTCTGTGTTTGAGTGTGGTATTTTTACCCTTCTACATGTTATGTTTAAGTTGCACCTATAATTGATACACATACCACCTGCTCTTCTTTTTTTGGGGGGGGGGGGGGCAACTGCTAACTCAGTGATTCTGTCTACCTTTGGAATTTTTTGCTCCTTAAAGTTGCTTCTGCCTTATTCCTCCAAGTAATGGGGAGTGTAGTTTGAGCAAAAAACTGTAAGTGTTAGAGTGTAGTTAAAAGGTTCTTTCACGTTATATTATTTCTTGCTGGCACTTCTTTTAGTTATTAACTGCAGGCACTACTTTTTAAAGAGAGTGCATAGGGATGGGTTGCTTTGTTGTCTTGCATATATCATATTATACTTGTGTGAAGTTAAAAGGTTCTTTTAGTTATTTTATTTCTTGCTTTGATCTCTTTGTTAGTGCACTCAACCTCTCTTGTAATCTATCCACTAACTTAAGTGCTTAACTCGTATACCATGTTGTTTGTTATGCTTAGTCAGTGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAGGTACCCGTTGTCTTGTTTGTGCACTTTGAGGATGTGCTTTCTTTAACCAGCAGGCGACCAGCTTACTAAGCATGACAATGACCTGATAATTTGTTTATTTAGGAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCA</genome_strand>
        <mrna_strand>AGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAG......................................................................................GTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG......................................................................................................GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E254722" ref_strand="+" ref_description="SGN-E254722 [cLEG-29-L6]">
      <seq>agctctgttcagtgaagataggtatcggtttccatgtttaaaatgaagtaaacttatcgagaaaaaagtattgtagagaggactggaggatgcacatataactgcatcttatagcaactaagtagattcatctgaattttgctggcattatttcttctgtctaattttttgatatataggcctgattctcgagtggtgaggttgattgagagaatgggctctgaggctaatccaaatcagaaacgcttactgtgcatcaataaagttgacctaatcgagaaaaagaaagacttgttgaaagttgttgaggaattcaaagaccttcctggatatgaaaggtgctttacggtatccggactaaagggcgctggagtgaaagatctaactaaatacttgatggagcagtgaaaagaccgtgggatgaagatccatttgtcatgagtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="19832" stop="21481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20132" g_stop="20469" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20470" i_stop="20555" i_length="86">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20556" g_stop="20622" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="405" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20623" i_stop="21141" i_length="519">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21142" g_stop="21181" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="445" r_length="40" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E254722" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20132" e_stop="20469"/>
          <exon e_start="20556" e_stop="20622"/>
          <exon e_start="21142" e_stop="21181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAGGTAATCTTTTACTTTTTCCTGTTATGGTATGTTATTTGGTACGAATGCTCATTATGGTGTTTGCTTTGTTGATTTATCCTTTATAGGTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAGGTATGTTCATGTCTGAGGCTCTGTGTTTGAGTGTGGTATTTTTACCCTTCTACATGTTATGTTTAAGTTGCACCTATAATTGATACACATACCACCTGCTCTTCTTTTTTTGGGGGGGGGGGGGGCAACTGCTAACTCAGTGATTCTGTCTACCTTTGGAATTTTTTGCTCCTTAAAGTTGCTTCTGCCTTATTCCTCCAAGTAATGGGGAGTGTAGTTTGAGCAAAAAACTGTAAGTGTTAGAGTGTAGTTAAAAGGTTCTTTCACGTTATATTATTTCTTGCTGGCACTTCTTTTAGTTATTAACTGCAGGCACTACTTTTTAAAGAGAGTGCATAGGGATGGGTTGCTTTGTTGTCTTGCATATATCATATTATACTTGTGTGAAGTTAAAAGGTTCTTTTAGTTATTTTATTTCTTGCTTTGATCTCTTTGTTAGTGCACTCAACCTCTCTTGTAATCTATCCACTAACTTAAGTGCTTAACTCGTATACCATGTTGTTTGTTATGCTTAGTCAGTGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGA</genome_strand>
        <mrna_strand>AGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAG......................................................................................GTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E372378" ref_strand="+" ref_description="SGN-E372378 [TUS-30-P21](-)">
      <seq>tgagttggtgaaggaagaagttatgaagaatatttcaatggaggtagtcagggaaaagttgctacattacatacatcaggaaatcccatatggcattgaccatcgcctgatggactggaaggagttacgtgatggttccctgagaattgaacaccatttgatcacacacaagataagccaacgcaagattctcgtaggaaagaatggttccaaaatagggagaataggtatcgaggcaaatgaagagttgagaacgatattcaagagaaatgtccatttaatgcttatggttagagtgaaatcatgaagatgaaagacaatatccttgttttgcatgtgtgtatatatagatgtgctccagtttttgtcccttaccaaagcagttctcagttgacacaataatttaccaaagcattaatccaaaattatattgttatgatacaaaatatggaagagaagcttgatttccctttacatgtgaatacactcatattcttttccatagatttaaggtcaaaattctagacattgtttgtattcatgttgggatcaattgtttgtaatgttggttcatttgcattgatatatttgaaccttcagttgctccatttcctcatctaaacaatgtactttttgattgttccattgccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="15809" stop="22651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21165" g_stop="21245" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.901"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102">
            <donor d_prob="0.469" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21348" g_stop="21487" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="219" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21918" g_stop="22350" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="652" r_length="433" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="653" polyA_stop="663"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E372378" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21165" e_stop="21245"/>
          <exon e_start="21348" e_stop="21487"/>
          <exon e_start="21918" e_stop="22350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAGGTACCCGTTGTCTTGTTTGTGCACTTTGAGGATGTGCTTTCTTTAACCAGCAGGCGACCAGCTTACTAAGCATGACAATGACCTGATAATTTGTTTATTTAGGAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGTAAGTATCTTCCCGTTGAGCCTTACTCATCTCTCTCATTAATACTAGAAGAACTTCAAGTATCTGTCAATGACTTCTCTGCTTAATACCTGAACCATGAAACTCTGAAATTGGGATTAAGCGTAATGCATGATTCTATACAGAAGGACTGGACTTAGCTGATGTCACTTGAACCATCGCCCTAGATAAAATCTTTTCTTTCTCTATGTAATTTACTGATTTATGAACATTGAACACAGATGTTCAGATCTATAGTTCTGTTTTCTAATTCCTTGTCTTCAAAACTATGACTCTACGAAATGTTACAGAGAAAAAACATTTATAATTTAGGATTCAGTATTTGTTTAAGCAAATTGTCGTTTGACATAATTATCTCAGCTTGGGCAAAGTTGCTTTATTATAACGTTATGTATCTGTCGTTTTCATGCAGGAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCAC</genome_strand>
        <mrna_strand>TGAGTTG--GTGAAGGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG......................................................................................................GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATTTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E349485" ref_strand="+" ref_description="SGN-E349485 [cTOS-1-E23]">
      <seq>aagttatgaagaatatttcaatggaggtagtcagggaaaagttgctacattacatacatcaggaaatcccatatggcattgaccatcgcctgatggactggaaggagttacgtgatggttccctgagaattgaacaccatttgatcacacacaagataagccaacgcaagattctcgtaggaaagaatggttccaaaatagggagaataggtatcgaggcaaatgaagagttgagaacgatattcaagagaaatgtccatctaatgcttatggttagagtgaaatcatgaagatgaaagacaatatccttgttttgcatgtgtgtatatatagatgtgctccagtttttgtcccttaccaaagcagttctcagttgacacaataatttaccaaagcattaatccaaaattatattgttatgatacaaaatatggaagagaagcttgatttccctttacatgtgaatacactcatattcttttccatagatttaaggtcaaaattctagacattgtttgtattcatgttgggatcaattgtttgtaatgttggttcatttgcattgatatatttgaaccttcagttgctccatttcctcatctaaacaatgtactttttgattgttccattgccacattttcccatctaacctatgtgcttctgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="20884" stop="22682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21184" g_stop="21245" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102">
            <donor d_prob="0.469" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21348" g_stop="21487" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="202" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21918" g_stop="22382" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="667" r_length="465" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E349485" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21184" e_stop="21245"/>
          <exon e_start="21348" e_stop="21487"/>
          <exon e_start="21918" e_stop="22382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAGGTACCCGTTGTCTTGTTTGTGCACTTTGAGGATGTGCTTTCTTTAACCAGCAGGCGACCAGCTTACTAAGCATGACAATGACCTGATAATTTGTTTATTTAGGAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGTAAGTATCTTCCCGTTGAGCCTTACTCATCTCTCTCATTAATACTAGAAGAACTTCAAGTATCTGTCAATGACTTCTCTGCTTAATACCTGAACCATGAAACTCTGAAATTGGGATTAAGCGTAATGCATGATTCTATACAGAAGGACTGGACTTAGCTGATGTCACTTGAACCATCGCCCTAGATAAAATCTTTTCTTTCTCTATGTAATTTACTGATTTATGAACATTGAACACAGATGTTCAGATCTATAGTTCTGTTTTCTAATTCCTTGTCTTCAAAACTATGACTCTACGAAATGTTACAGAGAAAAAACATTTATAATTTAGGATTCAGTATTTGTTTAAGCAAATTGTCGTTTGACATAATTATCTCAGCTTGGGCAAAGTTGCTTTATTATAACGTTATGTATCTGTCGTTTTCATGCAGGAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCACATTTTCCCATCTAACCTATGTGCTTCTGTTCT</genome_strand>
        <mrna_strand>AAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG......................................................................................................GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCACATTTTCCCATCTAACCTATGTGCTTCTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E372200" ref_strand="+" ref_description="SGN-E372200 [TUS-30-P20](-)">
      <seq>agttatgaagaatatttcaatggaggtagtcagggaaaagttgctacattacatacatcaggaaatcccatatggcattgaccatcgcctgatggactggaaggagttacgtgatggttccctgagaattgaacaccatttgatcacacacaagataagccaacgcaagattctcgtaggaaagaatggttccaaaatagggagaataggtatcgaggcaaatgaagagttgagaacgatattcaagagaaatgtccatctaatgcttatggttagagtgaaatcatgaagatgaaagacaatatccttgttttgcatgtgtgtatatatagatgtgctccagtttttgtcccttaccaaagcagttctcagttgacacaataatttaccaaagcattaatccaaaattatattgttatgatacaaaatatggaagagaagcttgatttccctttacatgtgaatacactcatattcttttccatagatttaaggtcaaaattctagacattgtttgtattcatgttgggatcaattgtttgtaatgttggttcatttgcattgatatatttgaaccttcagttgctccatttcctcatctaaacaatgtactttttgattgttccattgccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="20885" stop="22651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21185" g_stop="21245" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102">
            <donor d_prob="0.469" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21348" g_stop="21487" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="201" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21918" g_stop="22350" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="634" r_length="433" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="635" polyA_stop="645"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E372200" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21185" e_stop="21245"/>
          <exon e_start="21348" e_stop="21487"/>
          <exon e_start="21918" e_stop="22350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAGGTACCCGTTGTCTTGTTTGTGCACTTTGAGGATGTGCTTTCTTTAACCAGCAGGCGACCAGCTTACTAAGCATGACAATGACCTGATAATTTGTTTATTTAGGAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGTAAGTATCTTCCCGTTGAGCCTTACTCATCTCTCTCATTAATACTAGAAGAACTTCAAGTATCTGTCAATGACTTCTCTGCTTAATACCTGAACCATGAAACTCTGAAATTGGGATTAAGCGTAATGCATGATTCTATACAGAAGGACTGGACTTAGCTGATGTCACTTGAACCATCGCCCTAGATAAAATCTTTTCTTTCTCTATGTAATTTACTGATTTATGAACATTGAACACAGATGTTCAGATCTATAGTTCTGTTTTCTAATTCCTTGTCTTCAAAACTATGACTCTACGAAATGTTACAGAGAAAAAACATTTATAATTTAGGATTCAGTATTTGTTTAAGCAAATTGTCGTTTGACATAATTATCTCAGCTTGGGCAAAGTTGCTTTATTATAACGTTATGTATCTGTCGTTTTCATGCAGGAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCAC</genome_strand>
        <mrna_strand>AGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG......................................................................................................GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E203299" ref_strand="+" ref_description="SGN-E203299 [cLEB-3-F3](-)">
      <seq>acgtgatggttccctgagaattgaacaccatttgatcacacacaagataagccaacgcaagattctcgtaggaaagaatggttccaaaatagggagaataggtatcgaggcaaatgaagagttgagaacgatattcaagagaaatgtccatctaatgcttatggttagagtgaaatcatgaagatgaaagacaatatccttgttttgcatgtgtgtatatatagatgtgctccagtttttgtcccttaccaaagcagttctcagttgacacaataatttaccaaagcattaatccaaaattatattgttatgatacaaaatatggaagagaagcttgatttccctttacatgtgaatacactcatattcttttccatagatttaaggtcaaaattctagacattgtttgtattcatgttgggatcaattgtttgtaatgttggttcatttgcattgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="21095" stop="22585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21395" g_stop="21487" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21918" g_stop="22280" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="456" r_length="363" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="457" polyA_stop="472"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E203299" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21395" e_stop="21487"/>
          <exon e_start="21918" e_stop="22280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGGGTAAGTATCTTCCCGTTGAGCCTTACTCATCTCTCTCATTAATACTAGAAGAACTTCAAGTATCTGTCAATGACTTCTCTGCTTAATACCTGAACCATGAAACTCTGAAATTGGGATTAAGCGTAATGCATGATTCTATACAGAAGGACTGGACTTAGCTGATGTCACTTGAACCATCGCCCTAGATAAAATCTTTTCTTTCTCTATGTAATTTACTGATTTATGAACATTGAACACAGATGTTCAGATCTATAGTTCTGTTTTCTAATTCCTTGTCTTCAAAACTATGACTCTACGAAATGTTACAGAGAAAAAACATTTATAATTTAGGATTCAGTATTTGTTTAAGCAAATTGTCGTTTGACATAATTATCTCAGCTTGGGCAAAGTTGCTTTATTATAACGTTATGTATCTGTCGTTTTCATGCAGGAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTG</genome_strand>
        <mrna_strand>ACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314133" ref_strand="+" ref_description="SGN-E314133 [cTOA-21-I13]">
      <seq>agaagccaaaaaagagactttcccttctagttttctgccaaacattcatatctctttcctcattagtgaaaaactccacctccttaactcacatgtccactgaatttgagaaacataaaagagtaaaaataaccttaactttcctttttacaactctcctagcttcaaactcaaaatcccttttagtattatctccaattatactctaaaaatggaagcttttcatcatccccctattagctttcactttccctatgcttttcctatcccaacaccaacaaccaattttcttggaactccaaattcatcatcagttaatggaatgatcatcaacacttggatggatagtagaatttggagtagacttccacataggcttattgatagaatcattgcttttctaccaccacctgctttctttagagctagagttgtgtgtaagagattctatggacttatttactctacacattttcttgaattgtacttgcaagtttcacctaagaggaactggttcattttctttaacaaaaagtaccaagaaacaacatttacaagaacgtgatgaatagtagtaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="28115" stop="29295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28415" g_stop="28995" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E314133" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28415" e_stop="28995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCCAAAAAAGAGACTTTCCCTTCTAGTTTTCTGCCAAACATTCATATCTCTTTCCTCATTAGTGAAAAACTCCACCTCCTTAACTCACATGTCCACTGAATTTGAGAAACATAAAAGAGTAAAAATAACCTTAACTTTCCTTTTTACAACTCTCCTAGCTTCAAACTCAAAATCCCTTTTAGTATTATCTCCAATTATACTCTAAAAATGGAAGCTTTTCATCATCCCCCTATTAGCTTTCACTTTCCCTATGCTTTTCCTATCCCAACACCAACAACCAATTTTCTTGGAACTCCAAATTCATCATCAGTTAATGGAATGATCATCAACACTTGGATGGATAGTAGAATTTGGAGTAGACTTCCACATAGGCTTATTGATAGAATCATTGCTTTTCTACCACCACCTGCTTTCTTTAGAGCTAGAGTTGTGTGTAAGAGATTCTATGGACTTATTTACTCTACACATTTTCTTGAATTGTACTTGCAAGTTTCACCTAAGAGGAACTGGTTCATTTTCTTTAAACAAAAAGTACCAAGAAACAACATTTACAAGAACGTGATGAATAGTAGTAACT</genome_strand>
        <mrna_strand>AGAAGCCAAAAAAGAGACTTTCCCTTCTAGTTTTCTGCCAAACATTCATATCTCTTTCCTCATTAGTGAAAAACTCCACCTCCTTAACTCACATGTCCACTGAATTTGAGAAACATAAAAGAGTAAAAATAACCTTAACTTTCCTTTTTACAACTCTCCTAGCTTCAAACTCAAAATCCCTTTTAGTATTATCTCCAATTATACTCTAAAAATGGAAGCTTTTCATCATCCCCCTATTAGCTTTCACTTTCCCTATGCTTTTCCTATCCCAACACCAACAACCAATTTTCTTGGAACTCCAAATTCATCATCAGTTAATGGAATGATCATCAACACTTGGATGGATAGTAGAATTTGGAGTAGACTTCCACATAGGCTTATTGATAGAATCATTGCTTTTCTACCACCACCTGCTTTCTTTAGAGCTAGAGTTGTGTGTAAGAGATTCTATGGACTTATTTACTCTACACATTTTCTTGAATTGTACTTGCAAGTTTCACCTAAGAGGAACTGGTTCATTTTCTTT-AACAAAAAGTACCAAGAAACAACATTTACAAGAACGTGATGAATAGTAGTAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E350583" ref_strand="+" ref_description="SGN-E350583 [cTOS-5-N17]">
      <seq>gttcttcttggctaccagcaggcactcctaaggatgaggagtctacagaggagaaacaacagaaaaagaagagaaggaaggatcagcaagatgaaactgcgtttgacgaagacattgtagaggattttattctcagttctgatgatgaggagggttccttgagtgacgccccctctgatgaagaagccagcataaaacaaaagccatctaaagcgccttcaaagaagaaagggaaaactcatcggaggaagaacaagaaaaggaagcaatccaatcaagcagcatcttctgtctgatgattcttgtacaaggaacaagaacagtgtagcataagccagtttgtccagtgtaagctctaagcaaaatatattatactgtactagttagctatcaattttgttttcctttatcctaaaaaaattttcgtgccatgtagggcagactacgtataacaattcatacataactaatcgcaactagttgggaatggagatgtaattcattgatcgatctatttctttttggcacttatagaggtcgttcttttgatgtacccctttgatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="-" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="32035" stop="30709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31735" g_stop="31705" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31704" i_stop="31546" i_length="159">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31545" g_stop="31003" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="574" r_length="543" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="-" ref_id="SGN-E350583" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31735" e_stop="31705"/>
          <exon e_start="31545" e_stop="31003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTTCTTGGCTACCAGCAGGCACTCCTAAGTACGTTCACATTCTTCTTCACCACTTACCTATTCCCACCACCTATAACTCTCTCCTCGAGAGGAAAAGAACCCTTGAGACCTGACAGGAAGGGATCAACAAGCTATCTTTATTTTGTTGGTGTATATGAATGTATTTGTCTGGTATAATGTTTTGCAGGGATGAGGAGTCTACAGAGGAGAAACAACAGAAAAAGAAGAGAAGGAAGGATCAGCAAGATGAAACTGCGTTTGACGAAGACATTGTAGAGGATTTTATTCTCAGTTCTGATGATGAGGAGGGTTCCTTGAGTGACGCCCCCTCTGATGAAGAAGCCAGCATAAAACAAAAGCCATCTAAAGCGCCTTCAAAGAAGAAAGGGAAAACTCATCGGAGGAAGAACAAGAAAAGGAAGCAATCCAATCAAGCAGCATCTTCTGTCTGATGATTCTTGTACAAGGAACAAGAACAGTGTAGCATAAGCCAGTTTGTCCAGTGTAAGCTCTAAGCAAAATATATTATACTGTACTAGTTAGCTATCAATTTTGTTTTCCTTTATCCTAAAAAAATTTTCGTGCCATGTAGGGCAGACTACGTATAACAATTCATACATAACTAATCGCAACTAGTTGGGAATGGAGATGTAATTCATTGATCGATCTATTTCTTTTTGGCACTTATAGAGGTCGTTCTTTTGATGTACCCCTTTGATCACAACTCGAG</genome_strand>
        <mrna_strand>GTTCTTCTTGGCTACCAGCAGGCACTCCTAA...............................................................................................................................................................GGATGAGGAGTCTACAGAGGAGAAACAACAGAAAAAGAAGAGAAGGAAGGATCAGCAAGATGAAACTGCGTTTGACGAAGACATTGTAGAGGATTTTATTCTCAGTTCTGATGATGAGGAGGGTTCCTTGAGTGACGCCCCCTCTGATGAAGAAGCCAGCATAAAACAAAAGCCATCTAAAGCGCCTTCAAAGAAGAAAGGGAAAACTCATCGGAGGAAGAACAAGAAAAGGAAGCAATCCAATCAAGCAGCATCTTCTGTCTGATGATTCTTGTACAAGGAACAAGAACAGTGTAGCATAAGCCAGTTTGTCCAGTGTAAGCTCTAAGCAAAATATATTATACTGTACTAGTTAGCTATCAATTTTGTTTTCCTTTATCCTAAAAAAATTTTCGTGCCATGTAGGGCAGACTACGTATAACAATTCATACATAACTAATCGCAACTAGTTGGGAATGGAGATGTAATTCATTGATCGATCTATTTCTTTTTGGCACTTATAGAGGTCGTTCTTTTGATGTACCCCTTTGATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E351120" ref_strand="+" ref_description="SGN-E351120 [cTOS-6-H4]">
      <seq>gttcttcttggctaccagcaggcactcctaaggatgaggagtctacagaggagaaacaacagaaaaagaagagaaggaaggatcagcaagatgaaactgcgtttgacgaagacattgtagaggattttattctcagttctgatgatgaggagggttccttgagtgacgccccctctgatgaagaagccagcataaaacaaaagccatctaaagcgccttcaaagaagaaagggaaaactcatcggaggaagaacaagaaaaggaagcaatccaatcaagcagcatcttctgtctgatgattcttgtacaaggaacaagaacagtgtagcataagccagtttgtccagtgtaagctctaagcaaaatatattatactgtactagttagctatcaattttgttttcctttatcctaaaaaaattttcgtgccatgtagggcagactacgtataacaattcatacataactaatcgcaactagttgggaatggagatgtaattcattgatcgatctatttctttttggcacttatagaggtcgttcttttgatgtacccctttgatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="-" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="32035" stop="30709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31735" g_stop="31705" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31704" i_stop="31546" i_length="159">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31545" g_stop="31003" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="574" r_length="543" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="-" ref_id="SGN-E351120" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31735" e_stop="31705"/>
          <exon e_start="31545" e_stop="31003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTTCTTGGCTACCAGCAGGCACTCCTAAGTACGTTCACATTCTTCTTCACCACTTACCTATTCCCACCACCTATAACTCTCTCCTCGAGAGGAAAAGAACCCTTGAGACCTGACAGGAAGGGATCAACAAGCTATCTTTATTTTGTTGGTGTATATGAATGTATTTGTCTGGTATAATGTTTTGCAGGGATGAGGAGTCTACAGAGGAGAAACAACAGAAAAAGAAGAGAAGGAAGGATCAGCAAGATGAAACTGCGTTTGACGAAGACATTGTAGAGGATTTTATTCTCAGTTCTGATGATGAGGAGGGTTCCTTGAGTGACGCCCCCTCTGATGAAGAAGCCAGCATAAAACAAAAGCCATCTAAAGCGCCTTCAAAGAAGAAAGGGAAAACTCATCGGAGGAAGAACAAGAAAAGGAAGCAATCCAATCAAGCAGCATCTTCTGTCTGATGATTCTTGTACAAGGAACAAGAACAGTGTAGCATAAGCCAGTTTGTCCAGTGTAAGCTCTAAGCAAAATATATTATACTGTACTAGTTAGCTATCAATTTTGTTTTCCTTTATCCTAAAAAAATTTTCGTGCCATGTAGGGCAGACTACGTATAACAATTCATACATAACTAATCGCAACTAGTTGGGAATGGAGATGTAATTCATTGATCGATCTATTTCTTTTTGGCACTTATAGAGGTCGTTCTTTTGATGTACCCCTTTGATCACAACTCGAG</genome_strand>
        <mrna_strand>GTTCTTCTTGGCTACCAGCAGGCACTCCTAA...............................................................................................................................................................GGATGAGGAGTCTACAGAGGAGAAACAACAGAAAAAGAAGAGAAGGAAGGATCAGCAAGATGAAACTGCGTTTGACGAAGACATTGTAGAGGATTTTATTCTCAGTTCTGATGATGAGGAGGGTTCCTTGAGTGACGCCCCCTCTGATGAAGAAGCCAGCATAAAACAAAAGCCATCTAAAGCGCCTTCAAAGAAGAAAGGGAAAACTCATCGGAGGAAGAACAAGAAAAGGAAGCAATCCAATCAAGCAGCATCTTCTGTCTGATGATTCTTGTACAAGGAACAAGAACAGTGTAGCATAAGCCAGTTTGTCCAGTGTAAGCTCTAAGCAAAATATATTATACTGTACTAGTTAGCTATCAATTTTGTTTTCCTTTATCCTAAAAAAATTTTCGTGCCATGTAGGGCAGACTACGTATAACAATTCATACATAACTAATCGCAACTAGTTGGGAATGGAGATGTAATTCATTGATCGATCTATTTCTTTTTGGCACTTATAGAGGTCGTTCTTTTGATGTACCCCTTTGATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E349075" ref_strand="+" ref_description="SGN-E349075 [cTOS-2-I14]">
      <seq>gttcttcttggctaccagcaggcactcctaaggatgaggagtctacagaggagaaacaacagaaaaagaagagaaggaaggatcagcaagatgaaactgcgtttgacgaagacattgtagaggattttattctcagttctgatgatgaggagggttccttgagtgacgccccctctgatgaagaagccagcataaaacaaaagccatctaaagcgccttcaaagaagaaagggaaaactcatcggaggaagaacaagaaaaggaagcaatccaatcaagcagcatcttctgtctgatgattcttgtacaaggaacaagaacagtgtagcataagccagtttgtccagtgtaagctctaagcaaaatatattatactgtactagttagctatcaattttgttttcctttatcctaaaaaaattttcgtgccatgtagggcagactacgtataacaattcatacataactaatcgcaactagttgggaatggagatgtaattcattgatcgatctatttctttttggcacttatagaggtcgttcttttgatgtacccctttgatcaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="-" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="32035" stop="30709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31735" g_stop="31705" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31704" i_stop="31546" i_length="159">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31545" g_stop="31007" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="570" r_length="539" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="-" ref_id="SGN-E349075" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31735" e_stop="31705"/>
          <exon e_start="31545" e_stop="31007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTTCTTGGCTACCAGCAGGCACTCCTAAGTACGTTCACATTCTTCTTCACCACTTACCTATTCCCACCACCTATAACTCTCTCCTCGAGAGGAAAAGAACCCTTGAGACCTGACAGGAAGGGATCAACAAGCTATCTTTATTTTGTTGGTGTATATGAATGTATTTGTCTGGTATAATGTTTTGCAGGGATGAGGAGTCTACAGAGGAGAAACAACAGAAAAAGAAGAGAAGGAAGGATCAGCAAGATGAAACTGCGTTTGACGAAGACATTGTAGAGGATTTTATTCTCAGTTCTGATGATGAGGAGGGTTCCTTGAGTGACGCCCCCTCTGATGAAGAAGCCAGCATAAAACAAAAGCCATCTAAAGCGCCTTCAAAGAAGAAAGGGAAAACTCATCGGAGGAAGAACAAGAAAAGGAAGCAATCCAATCAAGCAGCATCTTCTGTCTGATGATTCTTGTACAAGGAACAAGAACAGTGTAGCATAAGCCAGTTTGTCCAGTGTAAGCTCTAAGCAAAATATATTATACTGTACTAGTTAGCTATCAATTTTGTTTTCCTTTATCCTAAAAAAATTTTCGTGCCATGTAGGGCAGACTACGTATAACAATTCATACATAACTAATCGCAACTAGTTGGGAATGGAGATGTAATTCATTGATCGATCTATTTCTTTTTGGCACTTATAGAGGTCGTTCTTTTGATGTACCCCTTTGATCACAACT</genome_strand>
        <mrna_strand>GTTCTTCTTGGCTACCAGCAGGCACTCCTAA...............................................................................................................................................................GGATGAGGAGTCTACAGAGGAGAAACAACAGAAAAAGAAGAGAAGGAAGGATCAGCAAGATGAAACTGCGTTTGACGAAGACATTGTAGAGGATTTTATTCTCAGTTCTGATGATGAGGAGGGTTCCTTGAGTGACGCCCCCTCTGATGAAGAAGCCAGCATAAAACAAAAGCCATCTAAAGCGCCTTCAAAGAAGAAAGGGAAAACTCATCGGAGGAAGAACAAGAAAAGGAAGCAATCCAATCAAGCAGCATCTTCTGTCTGATGATTCTTGTACAAGGAACAAGAACAGTGTAGCATAAGCCAGTTTGTCCAGTGTAAGCTCTAAGCAAAATATATTATACTGTACTAGTTAGCTATCAATTTTGTTTTCCTTTATCCTAAAAAAATTTTCGTGCCATGTAGGGCAGACTACGTATAACAATTCATACATAACTAATCGCAACTAGTTGGGAATGGAGATGTAATTCATTGATCGATCTATTTCTTTTTGGCACTTATAGAGGTCGTTCTTTTGATGTACCCCTTTGATCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E541230" ref_strand="+" ref_description="SGN-E541230 [TUS-61-O15]">
      <seq>cgcacagcttgtcattatggcgatgatactggtgaagatgctaagtcaaagtggagtactatgtctagcactgtgttcaacaagataatgttatttgttctaaaagaaatggatggaattcttcgtggccttttgaaattaccaacttctggtgggaagaaggagatgataaaggatatgtctaaaactaaacgatggaagagcaacaaccacttggtcaaatcatatcttgggaatgcgctacatgttctaaatcagatgacagatacagaaatgatatcatttacattacgaagactcagattttcatctgtatttttggctgcttttccagttcttttgaggaaatatataaaggttcttcttcatttctggggtacaggcggaggtgcactaccagttgtctcttttttgtttctaagggatctgtgtatacagcttggctctgattgcattgatgagtgcattagagggatgtataaagcttatttattgaactgccaattcatgaatgcgtcaaagctgcagcatattcaatttcttggtaattgtttcgttgaactccttagggtggatcttcccaatgcgtaccagcatgcctttgttttcattcggcagttggcaatgattttacgggatgcgcatagtagtactaagaccaagaaatcgtctaaaaagctaaccnatcatccaaagaagcacacaataccaagggcaaggaatcatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="-" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="35401" stop="33257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35101" g_stop="34745" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34744" i_stop="34263" i_length="482">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34262" g_stop="33957" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="663" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33956" i_stop="33621" i_length="336">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.886" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33620" g_stop="33569" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="714" r_length="51" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="-" ref_id="SGN-E541230" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35101" e_stop="34745"/>
          <exon e_start="34262" e_stop="33957"/>
          <exon e_start="33620" e_stop="33569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCACAGCTTGTCATTATGGCGATGATACTGGTGAAGATGCTAAGTCAAAGTGGAGTACTATGTCTAGCACTGTGTTCAACAAGATAATGTTATTTGTTCTAAAAGAAATGGATGGAATTCTTCGTGGCCTTTTGAAATTACCAACTTCTGGTGGGAAGAAGGAGATGATAAAGGATATGTCTAAAACTAAACGATGGAAGAGCAACAACCACTTGGTCAAATCATATCTTGGGAATGCGCTACATGTTCTAAATCAGATGACAGATACAGAAATGATATCATTTACATTACGAAGACTCAGATTTTCATCTGTATTTTTGGCTGCTTTTCCAGTTCTTTTGAGGAAATATATAAAGGTATGGGATTGACTGATCTAATACTTACTATTCACATAACTCTTTTCTTGTACAAAGAATGATTAATCTAGAATGACAGTTTTCTTCTGCTAGAATATAACTTTATTTGCAAGAGATTTGCATGTTTCATCCATTCCCCCTCTCCTTTGGGCAGTGGTGAGTTGGTTAGGCAATTTGCTGTTTTGAGGCTTCAGCTATAATCAAAAGCTAATTATCTTCAATTTGTCATTGGGGTCTTTTAAGTGTTTGGCCTTTGATCACTTCAAACTATGCACACTGCTTATTTCCTACTATCACAAACTAAGTAAATTCATTGAATTATGATCCATAAGAATTAAGTTTAAAAATATTCGCGAAGCACTCTCGGTTTAGACTTCTCTGTTTTTCAGAATACACGTGTCACATGGGTCTTTTGTTCTCTGCATGAGGTATTCTTCACACTGTCTAAAAGAATCAAGCTTAAGCATAATTTGACTTTTCAGGTTCTTCTTCATTTCTGGGGTACAGGCGGAGGTGCACTACCAGTTGTCTCTTTTTTGTTTCTAAGGGATCTGTGTATACAGCTTGGCTCTGATTGCATTGATGAGTGCATTAGAGGGATGTATAAAGCTTATTTATTGAACTGCCAATTCATGAATGCGTCAAAGCTGCAGCATATTCAATTTCTTGGTAATTGTTTCGTTGAACTCCTTAGGGTGGATCTTCCCAATGCGTACCAGCATGCCTTTGTTTTCATTCGGCAGTTGGCAATGATTTTACGGGATGCGCATAGTAGTACTAAGACCAAGGTTTGTTATTTTGTTTCTGATAACTTGTCTTCTTTCTGACTATTTGTTACCAACCATTGATATAAGCTTATTCTATAAATCTTTTAGGAGTAAAACTTAAAAAGGTATCTTGTGTAGCACTTTTTTTTTTAAATAACTTTAGATTAAGAATACTTGGCTTAATAGTTCCAACATACATGTTAGCTTAATTCATATTTTCACGTTTGAAAAGATGTTCAAAGAGTATCAAGTGGCTTCAGCATTTTACATTACTGGTAGCATCTTATCCTACTGAAAGTTATCCTTGCCTTTTAGTGGCCGCTAATTATTGTTATCCCTTTGTCTAATCTTTCCTAGAAATCGTCTAAAAAGGCTAACCAATCATCCAAGGAAGCACACAATACCAAGG</genome_strand>
        <mrna_strand>CGCACAGCTTGTCATTATGGCGATGATACTGGTGAAGATGCTAAGTCAAAGTGGAGTACTATGTCTAGCACTGTGTTCAACAAGATAATGTTATTTGTTCTAAAAGAAATGGATGGAATTCTTCGTGGCCTTTTGAAATTACCAACTTCTGGTGGGAAGAAGGAGATGATAAAGGATATGTCTAAAACTAAACGATGGAAGAGCAACAACCACTTGGTCAAATCATATCTTGGGAATGCGCTACATGTTCTAAATCAGATGACAGATACAGAAATGATATCATTTACATTACGAAGACTCAGATTTTCATCTGTATTTTTGGCTGCTTTTCCAGTTCTTTTGAGGAAATATATAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCTTCATTTCTGGGGTACAGGCGGAGGTGCACTACCAGTTGTCTCTTTTTTGTTTCTAAGGGATCTGTGTATACAGCTTGGCTCTGATTGCATTGATGAGTGCATTAGAGGGATGTATAAAGCTTATTTATTGAACTGCCAATTCATGAATGCGTCAAAGCTGCAGCATATTCAATTTCTTGGTAATTGTTTCGTTGAACTCCTTAGGGTGGATCTTCCCAATGCGTACCAGCATGCCTTTGTTTTCATTCGGCAGTTGGCAATGATTTTACGGGATGCGCATAGTAGTACTAAGACCAAG................................................................................................................................................................................................................................................................................................................................................AAATCGTCTAAAAA-GCTAACCNATCATCCAAAGAAGCACACAATACCAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E295566" ref_strand="+" ref_description="SGN-E295566 [cLET-23-P21]">
      <seq>gcacagcttgtcattatggcgatgatactggtgaagatgctaagtcaaagtggagtactatgtctagcactgtgttcaacaagataatgttatttgttctaaaagaaatggatggaattcttcgtggccttttgaaattaccaacttctggtgggaagaaggagatgataaaggatatgtctaaaactaaacgatggaagagcaacaaccacttggtcaaatcatatcttgggaatgcgctacatgttctaaatcagatgacagatacagaaatgatatcatttacattacgaagactcagattttcatctgtatttttggctgcttttccagttcttttgaggaaatatataaaggttcttcttcatttctggggtacaggcggaggtgcactaccagttgtctctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="-" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="35400" stop="33909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35100" g_stop="34745" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34744" i_stop="34263" i_length="482">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34262" g_stop="34209" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="410" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="-" ref_id="SGN-E295566" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35100" e_stop="34745"/>
          <exon e_start="34262" e_stop="34209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACAGCTTGTCATTATGGCGATGATACTGGTGAAGATGCTAAGTCAAAGTGGAGTACTATGTCTAGCACTGTGTTCAACAAGATAATGTTATTTGTTCTAAAAGAAATGGATGGAATTCTTCGTGGCCTTTTGAAATTACCAACTTCTGGTGGGAAGAAGGAGATGATAAAGGATATGTCTAAAACTAAACGATGGAAGAGCAACAACCACTTGGTCAAATCATATCTTGGGAATGCGCTACATGTTCTAAATCAGATGACAGATACAGAAATGATATCATTTACATTACGAAGACTCAGATTTTCATCTGTATTTTTGGCTGCTTTTCCAGTTCTTTTGAGGAAATATATAAAGGTATGGGATTGACTGATCTAATACTTACTATTCACATAACTCTTTTCTTGTACAAAGAATGATTAATCTAGAATGACAGTTTTCTTCTGCTAGAATATAACTTTATTTGCAAGAGATTTGCATGTTTCATCCATTCCCCCTCTCCTTTGGGCAGTGGTGAGTTGGTTAGGCAATTTGCTGTTTTGAGGCTTCAGCTATAATCAAAAGCTAATTATCTTCAATTTGTCATTGGGGTCTTTTAAGTGTTTGGCCTTTGATCACTTCAAACTATGCACACTGCTTATTTCCTACTATCACAAACTAAGTAAATTCATTGAATTATGATCCATAAGAATTAAGTTTAAAAATATTCGCGAAGCACTCTCGGTTTAGACTTCTCTGTTTTTCAGAATACACGTGTCACATGGGTCTTTTGTTCTCTGCATGAGGTATTCTTCACACTGTCTAAAAGAATCAAGCTTAAGCATAATTTGACTTTTCAGGTTCTTCTTCATTTCTGGGGTACAGGCGGAGGTGCACTACCAGTTGTCTCTTTT</genome_strand>
        <mrna_strand>GCACAGCTTGTCATTATGGCGATGATACTGGTGAAGATGCTAAGTCAAAGTGGAGTACTATGTCTAGCACTGTGTTCAACAAGATAATGTTATTTGTTCTAAAAGAAATGGATGGAATTCTTCGTGGCCTTTTGAAATTACCAACTTCTGGTGGGAAGAAGGAGATGATAAAGGATATGTCTAAAACTAAACGATGGAAGAGCAACAACCACTTGGTCAAATCATATCTTGGGAATGCGCTACATGTTCTAAATCAGATGACAGATACAGAAATGATATCATTTACATTACGAAGACTCAGATTTTCATCTGTATTTTTGGCTGCTTTTCCAGTTCTTTTGAGGAAATATATAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTCTTCATTTCTGGGGTACAGGCGGAGGTGCACTACCAGTTGTCTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E216569" ref_strand="+" ref_description="SGN-E216569 [cLEL-1-K12](-)">
      <seq>gatggtggttccgcctcggggagggagaggaaatggatgtttccggtggcggcggtggtgagagagtcaatataggagtggacaagtggtctttgagggatgttaattaagagtatggtggctgaaatatttttgtttttttgagtgaagtctttagcgaactcgatgattggagcaatgttgccaagtgctggtgttgaaatgtacactacctttccctagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="-" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="38463" stop="37643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38163" g_stop="37937" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="-" ref_id="SGN-E216569" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>227</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E216569" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38163" e_stop="37937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGTGGATCCGCCACGGGGAGGGAGAGGAAATGGATGTTTCCGGTGGCGGCGGTGGTGAGAGAGTCAATATAGGATTGGACAAGTGGTCTTTGAGGGATGTTAATTAAGAGTATGGTGGCTGAAATATTTTTGTTTTTTTGAGTGAAGACTTTAGCAAACTCAATAATTGGAACAATGTTGCCAGGTGCTGGTGTTGAAATGAACACTACCTTTCCTCTTTTCAT</genome_strand>
        <mrna_strand>GATGGTGGTTCCGCCTCGGGGAGGGAGAGGAAATGGATGTTTCCGGTGGCGGCGGTGGTGAGAGAGTCAATATAGGAGTGGACAAGTGGTCTTTGAGGGATGTTAATTAAGAGTATGGTGGCTGAAATATTTTTGTTTTTTTGAGTGAAGTCTTTAGCGAACTCGATGATTGGAGCAATGTTGCCAAGTGCTGGTGTTGAAATGTACACTACCTTTCC-CTAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E545265" ref_strand="+" ref_description="SGN-E545265 [TUS-68-A10]">
      <seq>aggaaaggtagtgttcatttcaacaccagcacttggcaacattgttccaattattgagtttgctaaagtcttcactcaaaaaaacaaaaatatttcagccaccatactcttaattaacatccctcaaagaccacttgtccaatcctatattgactctctcaccaccgccgccaccggaaacatccatttcctctccctccccgtggcggatccaccatcgctcgatcaattcgacgcaactataggctttttatcgctattaatacaaaatcacacgttacaagtcaaaaatgcacttattgaccttatttcagactcggactcggggcaagttgttggattctttattgacatgttttgtacatcttttattgatgtagctaaggaactaaacatcccatgttatctctactttgcttcccctgctactttcttgagcttcatgttgcatctcccaatattagatgctcaagttagtactaatattgagtacaaagattcagccaatgatttcaacattcttggtttttccaatcctgtccctatcaaatgtttcccttcattcatgctaaaaagacatatagatggttattcttggttcctacatcatgcaaaaaggtacaaagaaacaaagggtattattgtcaacacgtttcaagaacttgaaccatattgcttaaactcattagtacatactacaactagtcatgttgtaccaccaatttatccaattggacctgtagtggatcataatggaccagctcagtggcatcaagattcttgggggcatgaaaatgttatgaaatggcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="37645" stop="39057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37945" g_stop="38757" g_length="813"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="813" r_length="813" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E545265" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37945" e_stop="38757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAAGGTAGTGTTCATTTCAACACCAGCACCTGGCAACATTGTTCCAATTATTGAGTTTGCTAAAGTCTTCACTCAAAAAAACAAAAATATTTCAGCCACCATACTCTTAATTAACATCCCTCAAAGACCACTTGTCCAATCCTATATTGACTCTCTCACCACCGCCGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCGGATCCACCATCGCTCGATCAATTCGACGCAACTATAGGCTTTTTATCGCTATTAATACAAAATCACACGTTACAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCGGACTCGGGGCAAGTTGTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTAGCTAAGGAACTAAACATCCCATGTTATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGTCATGAAAATGTTATGAAATGGCTTGA</genome_strand>
        <mrna_strand>AGGAAAGGTAGTGTTCATTTCAACACCAGCACTTGGCAACATTGTTCCAATTATTGAGTTTGCTAAAGTCTTCACTCAAAAAAACAAAAATATTTCAGCCACCATACTCTTAATTAACATCCCTCAAAGACCACTTGTCCAATCCTATATTGACTCTCTCACCACCGCCGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCGGATCCACCATCGCTCGATCAATTCGACGCAACTATAGGCTTTTTATCGCTATTAATACAAAATCACACGTTACAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCGGACTCGGGGCAAGTTGTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTAGCTAAGGAACTAAACATCCCATGTTATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGGCATGAAAATGTTATGAAATGGCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E311655" ref_strand="+" ref_description="SGN-E311655 [cLEZ-9-D19]">
      <seq>ggaaaggtagtgttcatttcaacaccagcacttggcaacattgttccaattattgagtttgctaaagtcttcactcaaaaaaacaaaaatatttcagccaccatactcttaattaacatccctcaaagaccacttgtccaatcctatattgactctctcaccaccgccgccaccggaaacatccatttcctctccctccccgtggcggatccaccatcgctcgatcaattcgacgcaactataggctttttatcgctattaatacaaaatcacacgttacaagtcaaaaatgcacttattgaccttatttcagactcggactcggggcaagttgttggattctttattgacatgttttgtacatcttttattgatgtagctaaggaactaaacatcccatgttatctctactttgcttcccctgctactttcttgagcttcatgttgcatctcccaatattagatgctcaagttagtactaatattgagtacaaagattcagccaatgatttcaacattcttggtttttccaatcctgtccctatcaaatgtttcccttcattcatgctaaaaagacatatagatggttattcttggttcctacatcatgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="37646" stop="38858"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37946" g_stop="38558" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="613" r_length="613" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E311655" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E311655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37946" e_stop="38558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGGTAGTGTTCATTTCAACACCAGCACCTGGCAACATTGTTCCAATTATTGAGTTTGCTAAAGTCTTCACTCAAAAAAACAAAAATATTTCAGCCACCATACTCTTAATTAACATCCCTCAAAGACCACTTGTCCAATCCTATATTGACTCTCTCACCACCGCCGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCGGATCCACCATCGCTCGATCAATTCGACGCAACTATAGGCTTTTTATCGCTATTAATACAAAATCACACGTTACAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCGGACTCGGGGCAAGTTGTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTAGCTAAGGAACTAAACATCCCATGTTATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAA</genome_strand>
        <mrna_strand>GGAAAGGTAGTGTTCATTTCAACACCAGCACTTGGCAACATTGTTCCAATTATTGAGTTTGCTAAAGTCTTCACTCAAAAAAACAAAAATATTTCAGCCACCATACTCTTAATTAACATCCCTCAAAGACCACTTGTCCAATCCTATATTGACTCTCTCACCACCGCCGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCGGATCCACCATCGCTCGATCAATTCGACGCAACTATAGGCTTTTTATCGCTATTAATACAAAATCACACGTTACAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCGGACTCGGGGCAAGTTGTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTAGCTAAGGAACTAAACATCCCATGTTATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E720887" ref_strand="+" ref_description="SGN-E720887 [FC12AF06]">
      <seq>ttgaacatccctcaaagaccacttgtccaatcctatattgactctctcaccaccgccgccaccggaaacatccatttcctctccctccccgtggcggatccaccatcgctcgatcaattcgacgcaactataggctttttatcgctattaatacaaaatcacacgttacaagtcaaaaatgcacttattgaccttatttcaaactcggactcggggcaagttgttggattctttattgacatgttttgtacatcttttattgatgtagctaaggaactaaacatcccatgttatctctactttgcttcccctgctactttcttgagcttcatgttgcatctcccaatattagatgctcaagttagtactaatattgagtacaaagattcagccaatgatttcaacattcttggtttttccaatcctgtccctatcaaatgtttcccttcattcatgctaaaaagacatatagatggttattcttggttcctacatcatgcaaaaaggtacaaagaaacaaagggtattattgtcaacacgtttcaagaacttgaaccatattgcttaaactcattagtacatactacaactagtcatgttgtaccaccaatttatccaattgaacctgtagtggatcataatggaccagctcagtggcatcaagattcttggggtccatgaaaatgttatgaaatggcttgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="37758" stop="39059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38057" g_stop="38759" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="704" r_length="704" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E720887" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38057" e_stop="38759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAACATCCCTCAAAGACCACTTGTCCAATCCTATATTGACTCTCTCACCACCGCCGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCGGATCCACCATCGCTCGATCAATTCGACGCAACTATAGGCTTTTTATCGCTATTAATACAAAATCACACGTTACAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCGGACTCGGGGCAAGTTGTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTAGCTAAGGAACTAAACATCCCATGTTATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGT-CATGAAAATGTTATGAAATGGCTTGATA</genome_strand>
        <mrna_strand>TTGAACATCCCTCAAAGACCACTTGTCCAATCCTATATTGACTCTCTCACCACCGCCGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCGGATCCACCATCGCTCGATCAATTCGACGCAACTATAGGCTTTTTATCGCTATTAATACAAAATCACACGTTACAAGTCAAAAATGCACTTATTGACCTTATTTCAAACTCGGACTCGGGGCAAGTTGTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTAGCTAAGGAACTAAACATCCCATGTTATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGAACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGTCCATGAAAATGTTATGAAATGGCTTGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301093" ref_strand="+" ref_description="SGN-E301093 [cLEW-22-H24]">
      <seq>atctctactttgcttcccctgctactttcttgagcttcatgttgcatctcccaatattagatgctcaagttagtactaatattgagtacaaagattcagccaatgatttcaacattcttggtttttccaatcctgtccctatcaaatgtttcccttcattcatgctaaaaagacatatagatggttattcttggttcctacatcatgcaaaaaggtacaaagaaacaaagggtattattgtcaacacgtttcaagaacttgaaccatattgcttaaactcattagtacatactacaactagtcatgttgtaccaccaatttatccaattggacctgtagtggatcataatggaccagctcagtggcatcaagattcttggggtcatgaaaatgttatgaaatggcttgataatcaagaaccatcatcagtaattttcttgagttttggaagtatgggaagtcttaaagattcacaagtgatggaaatagcaaaaggtttggagaaagcangacacccttttttgtgggcaattagagaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="38049" stop="39190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38349" g_stop="38890" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E301093" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38349" e_stop="38890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGTCATGAAAATGTTATGAAATGGCTTGATAATCAAGAACCATCATCAGTAATTTTCTTGAGTTTTGGAAGTATGGGAAGTCTTAAAGATTCACAAGTGATGGAAATAGCAAAAGGTTTGGAGAAAGCAGGACACCCTTTTTTGTGGGCAATTAGAGAAGCA</genome_strand>
        <mrna_strand>ATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGTCATGAAAATGTTATGAAATGGCTTGATAATCAAGAACCATCATCAGTAATTTTCTTGAGTTTTGGAAGTATGGGAAGTCTTAAAGATTCACAAGTGATGGAAATAGCAAAAGGTTTGGAGAAAGCANGACACCCTTTTTTGTGGGCAATTAGAGAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301087" ref_strand="+" ref_description="SGN-E301087 [cLEW-22-F24]">
      <seq>gtccctatcaaatgttatcccttcattcatgctaaaaagacatatagatggttattcttggttcctacatcatgcaaaaaggtacaaagaaacaaagggtattattgtcaacacgtttcaagaactcgaaccatattgcttaaactcattagtacatactacaactagtcatgttgtaccaccaatttatccaattggacctgtagtggatcataatggaccagctcagtggcatcaagattcttggggtcatgaaaatgttatgaaatggcttgataatcaagaaccatcatcagtaattttcttgagttttggaagtatgggaagtcttaaagatccacaagtgatggaaatagctcaaggtttggagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="38183" stop="39155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38483" g_stop="38855" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E301087" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38483" e_stop="38855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCCTATCAAATGTT-TCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGTCATGAAAATGTTATGAAATGGCTTGATAATCAAGAACCATCATCAGTAATTTTCTTGAGTTTTGGAAGTATGGGAAGTCTTAAAGATTCACAAGTGATGGAAATAGCAAAAGGTTTGGAGAAAG</genome_strand>
        <mrna_strand>GTCCCTATCAAATGTTATCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTCGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGTCATGAAAATGTTATGAAATGGCTTGATAATCAAGAACCATCATCAGTAATTTTCTTGAGTTTTGGAAGTATGGGAAGTCTTAAAGATCCACAAGTGATGGAAATAGCTCAAGGTTTGGAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E545264" ref_strand="+" ref_description="SGN-E545264 [TUS-68-A10](-)">
      <seq>agaagcaccgaaggataaaagagaacttccaaatgattatacacacttagaggaaattttacctaatgggtttttagaatcaacaaaagggagagggctagtgtgtgggttggtcccacaagttacaatcttggcccataaggctatcggaggatttgtgtcacactgtggttggaattcgattctcgaaagtttatattacggagtgccaattggtacatggccaatatatgcagagcaacacttgaatgcatttgagttggtgaaagagttggatttggctgtggaaatcacaatggattatagagatggcaccacattggtttcatcagaggaagtggcaaaaggggttaaaaaattaatggatggtgatggtgatggtgaggtgagacaaaagttcaagaaaatgagtgagaaatgcaaggatgtttggaaggaaaatggctcatcttctaattttcttggacacttgattgatgaattaatggctgtgatttgaagaagggttggctagtccaaacttggtgggctttgtttgactacaaaatttagttgaattttataaagcgatgaaaataaagttttttagtttatgtaattctacctaattatgtaatttggattcaaaaataataataattaaagttacgatgatgaagtacattaataaaacttttattttctaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="38584" stop="39873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38884" g_stop="39573" g_length="690"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E545264" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38884" e_stop="39573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGCACCGAAGGATAAAAGAGAACTTCCAAATGATTATACAAACTTAGAGGAAATTTTACCTAATGGGTTTTTAGAATCAACAAAAGGGAGAGGGCTAGTGTGTGGGTTGGTCCCACAAGTTACAATCTTGGCCCATAAGGCTATCGGAGGATTTGTGTCACACTGTGGTTGGAATTCGATTCTCGAAAGTTTATATTACGGAGTGCCAATTGGTACATGGCCAATATATGCAGAGCAACACTTGAATGCATTTGAGTTGGTGAAAGAGTTGGATTTGGCTGTGGAAATCACAATGGATTATAGAGATGGCACCACATTGGTTTCATCAGAGGAAGTGGCAAAAGGGGTTAAAAAATTAATGGATGGTGATGGTGATGGTGAGGTGAGACAAAAGTTCAAGAAAATGAGTGAGAAATGCAAGGATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTAATGGCTGTGATTTGAAGAAGGGTTGGCTAGTCCAAACTTGGTGGGCTTTGTTTGACTACAAAATTTAGTTGAATTTTATAAAGCGATGAAAATAAAGTTTTTTAGTTTATGTAATTCTACCTAATTATGTAATTTGGATTCAAAAATAATAATAATTAAAGTTACGATGATGAAGTACATTAATAAAACTTTTATTTTCTAAAAGA</genome_strand>
        <mrna_strand>AGAAGCACCGAAGGATAAAAGAGAACTTCCAAATGATTATACACACTTAGAGGAAATTTTACCTAATGGGTTTTTAGAATCAACAAAAGGGAGAGGGCTAGTGTGTGGGTTGGTCCCACAAGTTACAATCTTGGCCCATAAGGCTATCGGAGGATTTGTGTCACACTGTGGTTGGAATTCGATTCTCGAAAGTTTATATTACGGAGTGCCAATTGGTACATGGCCAATATATGCAGAGCAACACTTGAATGCATTTGAGTTGGTGAAAGAGTTGGATTTGGCTGTGGAAATCACAATGGATTATAGAGATGGCACCACATTGGTTTCATCAGAGGAAGTGGCAAAAGGGGTTAAAAAATTAATGGATGGTGATGGTGATGGTGAGGTGAGACAAAAGTTCAAGAAAATGAGTGAGAAATGCAAGGATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTAATGGCTGTGATTTGAAGAAGGGTTGGCTAGTCCAAACTTGGTGGGCTTTGTTTGACTACAAAATTTAGTTGAATTTTATAAAGCGATGAAAATAAAGTTTTTTAGTTTATGTAATTCTACCTAATTATGTAATTTGGATTCAAAAATAATAATAATTAAAGTTACGATGATGAAGTACATTAATAAAACTTTTATTTTCTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E217032" ref_strand="+" ref_description="SGN-E217032 [cLEL-1-K12](-)">
      <seq>atggattatagagatggcaccacattggtttcatcagaggaagtggcaaaaggggttaaaaaattaatggatggtgatggtgatggtgaggtgagacaaaagttcaagaaaatgagtgagaaatgcaaggatgtttggaaggaaaatggctcatcttctaattttcttggacacttgattgatgaattaatggctgtgatttgaagaagggttggctagtccaaacttggtgggctttgtttgactacaaaatttagttgaattttataaagcgatgaaaataaagttttttagtttatgtaactccccctaattatgtaatttgcccccaaaaataataataattaaagtttcgatgataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="38879" stop="39855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39179" g_stop="39556" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E217032" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39179" e_stop="39556"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGATTATAGAGATGGCACCACATTGGTTTCATCAGAGGAAGTGGCAAAAGGGGTTAAAAAATTAATGGATGGTGATGGTGATGGTGAGGTGAGACAAAAGTTCAAGAAAATGAGTGAGAAATGCAAGGATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTAATGGCTGTGATTTGAAGAAGGGTTGGCTAGTCCAAACTTGGTGGGCTTTGTTTGACTACAAAATTTAGTTGAATTTTATAAAGCGATGAAAATAAAGTTTTTTAGTTTATGTAATTCTACCTAATTATGTAATTTGGATTCAAAAATAATAATAATTAAAGTTACGATGATGAAGTACATTAATAAAAC</genome_strand>
        <mrna_strand>ATGGATTATAGAGATGGCACCACATTGGTTTCATCAGAGGAAGTGGCAAAAGGGGTTAAAAAATTAATGGATGGTGATGGTGATGGTGAGGTGAGACAAAAGTTCAAGAAAATGAGTGAGAAATGCAAGGATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTAATGGCTGTGATTTGAAGAAGGGTTGGCTAGTCCAAACTTGGTGGGCTTTGTTTGACTACAAAATTTAGTTGAATTTTATAAAGCGATGAAAATAAAGTTTTTTAGTTTATGTAACTCCCCCTAATTATGTAATTTGCCCCCAAAAATAATAATAATTAAAGTTTCGATGATAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E216472" ref_strand="+" ref_description="SGN-E216472 [cLEL-1-M19](-)">
      <seq>aaaaggggttaaaaaattaatggatggtgatggtgatggtgaggtgagacaaaagttcaagaaaatgagtgagaaatgcaaggatgtttggaaggaaaatggctcatcttctaattttcttggacacttgattgatgaattaatggctgtgatttgaagaagggttggctagtccaaacttggtgggctttgtttgactacaaaatttagttgaattttataaagcgatgaaaataaagttttttagtttatgtaattctacctaattatgtaatttgcccccaaaaataataataattaaagttncgatgatgaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="38926" stop="39855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39226" g_stop="39555" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E216472" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>330</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E216472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39226" e_stop="39555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGGTTAAAAAATTAATGGATGGTGATGGTGATGGTGAGGTGAGACAAAAGTTCAAGAAAATGAGTGAGAAATGCAAGGATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTAATGGCTGTGATTTGAAGAAGGGTTGGCTAGTCCAAACTTGGTGGGCTTTGTTTGACTACAAAATTTAGTTGAATTTTATAAAGCGATGAAAATAAAGTTTTTTAGTTTATGTAATTCTACCTAATTATGTAATTTGGATTCAAAAATAATAATAATTAAAGTTACGATGATGAAGTACATTAATAAAA</genome_strand>
        <mrna_strand>AAAAGGGGTTAAAAAATTAATGGATGGTGATGGTGATGGTGAGGTGAGACAAAAGTTCAAGAAAATGAGTGAGAAATGCAAGGATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTAATGGCTGTGATTTGAAGAAGGGTTGGCTAGTCCAAACTTGGTGGGCTTTGTTTGACTACAAAATTTAGTTGAATTTTATAAAGCGATGAAAATAAAGTTTTTTAGTTTATGTAATTCTACCTAATTATGTAATTTGCCCCCAAAAATAATAATAATTAAAGTTNCGATGATGAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E721998" ref_strand="+" ref_description="SGN-E721998 [FC15DF06]">
      <seq>aatcggccgaattgactcttcgtctacataaagaagagaaaacctctcgactcttttcattgcgcttctctttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39875" stop="44393"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40163" g_stop="40252" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="44093" g_length="757"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="846" r_length="757" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E721998" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E721998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40163" e_stop="40252"/>
          <exon e_start="43337" e_stop="44093"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAGACTAGCTTCACTCTTCGTCTACATAAAGAAGAGAAAACCTCTCGACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACA</genome_strand>
        <mrna_strand>AATCGGCCGA-ATTGACTCTTCGTCTACATAAAGAAGAGAAAACCTCTCGACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E697748" ref_strand="+" ref_description="SGN-E697748 [FA04AB07]">
      <seq>cctctcgactcttttcattgcgcttctctttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaatatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttccgagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39906" stop="44344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40206" g_stop="40252" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="44044" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="755" r_length="708" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E697748" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40206" e_stop="40252"/>
          <exon e_start="43337" e_stop="44044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCTCGACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCC</genome_strand>
        <mrna_strand>CCTCTCGACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAATATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCCGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345684" ref_strand="+" ref_description="SGN-E345684 [cTOF-18-H3]">
      <seq>ctctcgaactcttttcattgcgcttctctttagatctcacaatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagttttggtgggncttcgccctttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacnngtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39907" stop="44209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40207" g_stop="40252" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.913"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="0.91"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="43909" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="625" r_length="577" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E345684" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40207" e_stop="40252"/>
          <exon e_start="43337" e_stop="43909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCG-ACTCTTTTCATTGCGCTTCTCTTTAGATCTCAC-ATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAG-TTTGGTGGG-CTTCGCCC-TTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTAC-GGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCAC</genome_strand>
        <mrna_strand>CTCTCGAACTCTTTTCATTGCGCTTCTCTTTAGATCTCACAATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTTGGTGGGNCTTCGCCCTTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACNNGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E707503" ref_strand="+" ref_description="SGN-E707503 [FA33AG10]">
      <seq>ccgtctcttttcattgcgcttctctttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgccttccaatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttaccactgcatgcatatttatgtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39911" stop="44530"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40210" g_stop="40252" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="0.95"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="44229" g_length="893"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="936" r_length="893" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E707503" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>936</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40210" e_stop="40252"/>
          <exon e_start="43337" e_stop="44229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAA</genome_strand>
        <mrna_strand>CCGTCTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACCACTGCATGCATATTTATGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E700106" ref_strand="+" ref_description="SGN-E700106 [FA12AE12]">
      <seq>ccccttttttcattgcgcttctctttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactaccctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39914" stop="44369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40211" g_stop="40252" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="0.93"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="44069" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="775" r_length="733" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E700106" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E700106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40211" e_stop="40252"/>
          <exon e_start="43337" e_stop="44069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTG</genome_strand>
        <mrna_strand>CCCCTTTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTACCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E321223" ref_strand="+" ref_description="SGN-E321223 [cTOB-13-P2]">
      <seq>gactcttttcattgcgcttctctttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcactaacgtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39912" stop="44125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40212" g_stop="40252" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="43825" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="530" r_length="489" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E321223" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40212" e_stop="40252"/>
          <exon e_start="43337" e_stop="43825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTA</genome_strand>
        <mrna_strand>GACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACTAACGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E358990" ref_strand="+" ref_description="SGN-E358990 [cLHT-24-J18]">
      <seq>tctttagatctcacatctcaggtattctgcagtaacgaaaaaaatgtcacgaaggtatgatagccgtacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctcaacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacatactgatcaacacagccagggttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgttcagtcactatgtgacaccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39932" stop="44123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40232" g_stop="40252" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="43823" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="508" r_length="487" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E358990" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358990" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40232" e_stop="40252"/>
          <exon e_start="43337" e_stop="43823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTAGATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAAT</genome_strand>
        <mrna_strand>TCTTTAGATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAACGAAAAAAATGTCACGAAGGTATGATAGCCGTACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCAACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATACTGATCAACACAGCCAGGGTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTTCAGTCACTATGTGACACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E318397" ref_strand="+" ref_description="SGN-E318397 [cTOA-29-N20]">
      <seq>gatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaaggggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaaacgggaagtcaagtatcaagcatgctctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39938" stop="44344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40238" g_stop="40252" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="44044" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="724" r_length="709" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E318397" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40238" e_stop="40252"/>
          <exon e_start="43337" e_stop="44044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAA-GGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCC</genome_strand>
        <mrna_strand>GATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAAACGGGAAGTCAAGTATCAAGCATGCTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E327699" ref_strand="+" ref_description="SGN-E327699 [cTOC-20-I17]">
      <seq>gatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttgggtagacaatggacagcactagcctcacttcggagaaacttgaacttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="39938" stop="44296"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40238" g_stop="40252" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="43996" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="675" r_length="660" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E327699" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40238" e_stop="40252"/>
          <exon e_start="43337" e_stop="43996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTCACATCTCAGGTATCTTTCTATATCTTCAAATGGCGATTTTTTTTTCCTATTACTGATGCGTTGATCGATATAAACCCTCTCCCTTTTCCCAATTTCTTGGTATTTTTCTTGATTTTTGTAATGTTCTTTTTGTTGAACTCAGTGATGGGTTTGTGTTATTCTATTGATAAGTAAATTAGTTGAACTTCTTGGGTTATATTTTCAAGAAAATGTATGGAAAATTTTGGGTTTTTTTTGTGAAAGTAGGAAGAGGGTTTACATGAGAAGGAGTTTAATTGATCTCTTGCAAGTAAATGATAATTGACGACAAATATTTTACCGGTGGCGCGATAAGTTCATTTCTATAGCAGCTCTGGTTGTAAAGAATTGTTTTAATTAGAAAAAAAAGAGAGACAAATTTCATTAAGACGTGCAATGGAGACAATTTAGCTTATGGGTGTCACTAGTTAGGGAAGTTGGGTGGGTATCTGGTGTTTATGAAGTATAAGTTGCAGAATATGACTAGGGTTTTAACCCCTGCCCAGGAGCTCTCGCACCTTTTAGCTCCATTGGTGACTCGAACCCCAACCTTAGGGTTGGGGGTTGGAGGGTGATTGCCATGTGAGCAACCCGTCCTGTCGTATGACCTGATTTAGGTAGTTATGCCATGGTGTTTTTGGTGTATATTTGAAAGATAAATTACAGCACCACACAGTGTTATAGGAGGGTTTTGAATGACTGGACCAATTTATAAAAATTTCTTCATTTGGAATGTCCAGTGAGGTCTTCTCTAGGATGGCTTTGAGTGTGGAATTCATGTATACTGTATTGAATAACTGTACCGACCTCGGTTGAAGATTCAAGTGTTAAAAAGGAGATAGATCTAGTTAGTGTTTGTCTACATAGATTCTTCCCCTTGTAGTAAACAATAGTTCCTTAGCAGTTAAAGGCATGTTTAGTCTAAGTTGTAAGATTGCTGCAGTGTTTACTGAGTTTTAATACTATACCCACTCGGCGTTGTTAACTCTCGATTTTATAGTTCCTTTCTTTATCTCTCCTTTTTGAACAATGCTCTTAGATTTTTATTGGAATATAAGGAGTGAAAGTGTAAATGTACCAAACTTTAGCCTTAATCTACAGAAACCTAATATAAGATTTCTGATCCTGACAGCTAATAGTTTACCTTAGCTGCCTTAAATCCCTTCTTACAATTGGTCCTTTTTATAATCCCCTGTTCACCTTTTACAAAATTTTTTTTATCTTGGAGCAACATATAACCAATCTCTGGTAAACATTTGATGTTTTCTTAATTGAAATCTAGGATAATATTTAACCTTGGATCACATTGCTCCTGATTTGATTTCTTGAGAAGTTATCTCCGTCTTTGTACCAAGTGCAGACTGTATCCTGCATCCAATTAGTATACAATTGAGCTACTCTTAAAATCTTTTGGTTTCAATTGCAAGAACTGAAGTTGACACTGGTGGTACTAGCCTCCAGTCTGGCAATTGTATTTATATTACTCTAGTGGGCAAGCCACATCTTAGTGTTTCAAGTAAGAGTTATGACAAAGTGATTTGTCTTCTTTGCTTTTGCTACTAGTAAAATTCTACCAGAACCTACCAAATTCATGAGTCTGCAATCACTCAAAGTAGAGCTCTTCCCCACAAACAATTCTCCCTCCAAGTTTTTCACATTTCCTGTGGAACTTAATACGCAATAATGCTAGTGCTTTTTTCTTTTTGATTCAAATCCTAAGAAGTTGCACCATAAATTCTGTTATGTCCCCAGTCGTAATTCCTTTTGGCTCATTGCCGTGACTTGTATAATCTCTTCCATCTGCAACTTGCATTGTGATCTTGTTGCCCACAATGGCCTTGCTAATGATTCCCTTTTCGACAAACTGGACAGTATTTTCAGAAGGTTCCTTGCCTTGTTGGATCTCAAAAGGTGCTGGACTTGATGAAAATAATCCTCCTAATAATCATTGTTTAATCTGTCATTATCTCTTTTAGCTGCCCATTCTGTCTTGAGTTCCCATCGTTAATGAAGTGAAAGTGGTAAACAAGCTGCTTTGGTTGGTACCACTAAGAAATTGTACAGTTTGATGCCTACCAAAATAAAACGGAAAGAACAGACTTGTTATTTTCTTAATCTATAGCAGATAAATATAGATTAGCTGACACTGACCTCAAGTTAGAAGAAAAATAGAAAAGAAAACTCTGATCTAACTAATGATTTTTATACTTGTTATCTTCTGGCAATCCTTGTTGCTGCTCCTTATTTAGCTAACTGCATATTCAAGTTTTTTTCAGTTAAAATTTCTTCTCTCTAAATGTAATTCATTCACATGCCATATGGGCCTTAATTTTGGAATGCTAAACTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGC</genome_strand>
        <mrna_strand>GATCTCACATCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGGTAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E543786" ref_strand="+" ref_description="SGN-E543786 [TUS-65-M13]">
      <seq>ctcacatctcagtttgttttgagaagtacagggaagggttagcagttagcactctgaaacatttttttatgagataaggaatttcattaaatgacatcatgaagtgtcagctccaacttcatcttgggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcangttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaaagcgcagcaattggagcaaacaacccagcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaagcccgttcacttgctcttaaagtgcttggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="42309" stop="44250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42606" g_stop="42733" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42734" i_stop="43336" i_length="603">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="43950" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="741" r_length="614" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E543786" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E543786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42606" e_stop="42733"/>
          <exon e_start="43337" e_stop="43950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTA</genome_strand>
        <mrna_strand>CT-CACATCTCAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCANGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAAGCGCAGCAATTGGAGCAAACAACCCAGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAAGCCCGTTCACTTGCTCTTAAAGTGCTTGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E306285" ref_strand="+" ref_description="SGN-E306285 [cLEX-13-I15]">
      <seq>tcacatctcagtttgttttgagaagtacagggaagggttagcagttagcactctgaaacatttttttatgagataaggaatttcattaaatgacatcatgaagtgtcagctccaacttcatcttgggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="42309" stop="44006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42608" g_stop="42733" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42734" i_stop="43336" i_length="603">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43337" g_stop="43706" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="496" r_length="370" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E306285" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42608" e_stop="42733"/>
          <exon e_start="43337" e_stop="43706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGGGTATGTATTTTGCACTACTTGGCATGTATTGGACTATGCCAAACTCCTGACTTATCTGCTGCATAGTTGAAACAACGAGGGTCTCAAAAAGAAATTCCAAAAAACTTGGAATACTATTTCTCAGGCCATTTGGTGGACAGTTGGCTTGAAAGAAATAGCAGAATTTTCAAGGGAAAAGAAGAAATATACTTAGCCTTGAACACAAACGTATTTATTTGCTAGCTTTTTGGTGAAACCTGGTTCTTGTACATGATGTAGATGCAATGTTAGATACAATCGAGGAGTTGCACCTTCTTTATTCATGCATTTGCTTAGTGCAAGCTCATCTATGAAATCTCTTCTTACCAGTATCACTGTACACACACTTCAAATGTCCACAAGTTTATCCATACAGGTGGGAAGTCCCTGAGGTTGACAATTTTCAACTTCAACTCTTGTGTGGACTTATATATTGTTTCGACTCAGTTTTGTATCTTTCTTTCTGTTGTGTTTGCCAACATGCTCGTTAGTTAGACTTATTCATGGGAAGGGTAAAAAAATGAACCATGTTTTATGTGCTCTGAAATTTTTATCTAACTAGCTCAAGTTATGTTAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGAT</genome_strand>
        <mrna_strand>TCACATCTCAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E304920" ref_strand="+" ref_description="SGN-E304920 [cLEX-10-B3]">
      <seq>tcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctatatgcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43026" stop="43870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43326" g_stop="43570" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E304920" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E304920" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43326" e_stop="43570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCA</genome_strand>
        <mrna_strand>TCACATCTCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATATGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E391717" ref_strand="+" ref_description="SGN-E391717 [TUS-27-N4]">
      <seq>cacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagagagttatttctaatctgcttcagacctctacttcacgtgacaatatgtacaagatcgatgatcatgtggcatgcgctgtatctggaattatgtctgatgcctgcattctgatcaacacagccaggtttcatgctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggggggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43031" stop="44036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43327" g_stop="43735" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E391717" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391717" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43327" e_stop="43735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGG</genome_strand>
        <mrna_strand>CACATCTCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAGAGTTATTTCTAATCTGCTTCAGACCTCTACTTCACGTGACAATATGTACAAGATCGATGATCATGTGGCATGCGCTGTATCTGGAATTATGTCTGATGCCTGCATTCTGATCAACACAGCCAGGTTTCATGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271286" ref_strand="+" ref_description="SGN-E271286 [cLEM-5-J9]">
      <seq>acatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43031" stop="44123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43328" g_stop="43823" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E271286" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271286" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43328" e_stop="43823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAAT</genome_strand>
        <mrna_strand>ACATCTCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E730484" ref_strand="+" ref_description="SGN-E730484 [LA24BB03]">
      <seq>cctttatgtcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgcctttccatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttacaactgcatgcatatttatgtcaaatgctttccagttttgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43029" stop="44546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43337" g_stop="44239" g_length="903"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="915" r_length="903" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E730484" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>903</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43337" e_stop="44239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCA</genome_strand>
        <mrna_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTTCCATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E731291" ref_strand="+" ref_description="SGN-E731291 [LA26CG10]">
      <seq>ctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaaaaatagtcgtagaatgccctccaatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43026" stop="44482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43337" g_stop="44182" g_length="846"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="858" r_length="846" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E731291" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>846</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43337" e_stop="44182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAAC</genome_strand>
        <mrna_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAAAATAGTCGTAGAATGCCCTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E699568" ref_strand="+" ref_description="SGN-E699568 [FA10CB11]">
      <seq>ctttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaaaaatagtcgtaaaatgccttccaatctagcatatgacatcattgaactcctctctaccccatgtgtgacatgttgtactaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43020" stop="44480"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43337" g_stop="44180" g_length="844"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="865" r_length="845" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E699568" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>844</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699568" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43337" e_stop="44180"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACT-CTCTCTACGCCATGTGTGACATGTTGTACTAAA</genome_strand>
        <mrna_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAAAATAGTCGTAAAATGCCTTCCAATCTAGCATATGACATCATTGAACTCCTCTCTACCCCATGTGTGACATGTTGTACTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E344206" ref_strand="+" ref_description="SGN-E344206 [cTOF-16-N21]">
      <seq>ttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgangtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43020" stop="44383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43337" g_stop="44083" g_length="747"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="765" r_length="747" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E344206" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43337" e_stop="44083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGAC</genome_strand>
        <mrna_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGANGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E321220" ref_strand="+" ref_description="SGN-E321220 [cTOB-13-N20]">
      <seq>ttagatctcacatctcaggtattctgcagtaaagaaaaaaatgtcacgaaggtatgatagccgaacaacaatcttctccccagaaggtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactntacatgagcgacccaagtggaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43020" stop="44125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43337" g_stop="43825" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="507" r_length="489" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E321220" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43337" e_stop="43825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTA</genome_strand>
        <mrna_strand>GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTNTACATGAGCGACCCAAGTGGAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E268786" ref_strand="+" ref_description="SGN-E268786 [cLEM-4-B11]">
      <seq>tattctgcagtaaagaaaaaaatgtcacgaaagtatgatagccgaacaacaatcttctccccagaaagtcgtctctaccaagttgagtacgcaatggaggctattggaaatgcaagtagtgctataggcatcttgtccaaagatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaagctcagcgctatacgttcgcttatcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaattcttaagcaggattacaaggatgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43038" stop="44205"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43338" g_stop="43905" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E268786" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43338" e_stop="43905"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATA</genome_strand>
        <mrna_strand>TATTCTGCAGTAAAGAAAAAAATGTCACGAAAGTATGATAGCCGAACAACAATCTTCTCCCCAGAAAGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAAGTAGTGCTATAGGCATCTTGTCCAAAGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAAGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E339583" ref_strand="+" ref_description="SGN-E339583 [cTOE-16-D21]">
      <seq>agttgagtaccgccaatggaggctattggaaatgccaggtagtgctataggcatcttgtccaaggatggggtggtgttggtaggtgaaaagaaagttacatctaagctgcttcagacctctacttcaagtgagaagatgtacaagatcgatgatcatgtggcatgcgctgtagctggaattatgtctgatgccaacattctgatcaacacagccaggtttcaggctcagcgctatacgttcgcttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43118" stop="43962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43418" g_stop="43662" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E339583" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43418" e_stop="43662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTGAGTA-CG-CAATGGAGGCTATTGGAAATG-CAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATC</genome_strand>
        <mrna_strand>AGTTGAGTACCGCCAATGGAGGCTATTGGAAATGCCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E391716" ref_strand="+" ref_description="SGN-E391716 [TUS-27-N4](-)">
      <seq>gccaacattttgatcaacacagccaggtttcaggctcagcgctatacgttcgtttttcaagaacccatgccagttgagcaacttgtccagtcactatgtgataccaagcaaggttacacacagtttggtgggcttcgcccttttggtgtttcatttctctttgcaggttgggataaaaactatggcttccaactttacatgagcgacccaagtggaaattacggtggttggaaagccgcagcaattggagcaaacaaccaggcagctcaatcaatttttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactttgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgccttccaatttagcatatgacatcattgaactctctttacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttacaactgcatgcatatttatgtcaaatgctttccagtttgaattttgttttggattaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43305" stop="44562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43605" g_stop="44257" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="657" polyA_stop="671"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E391716" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43605" e_stop="44257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGG</genome_strand>
        <mrna_strand>GCCAACATTTTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGTTTTTCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTTTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTTTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTCCAATTTAGCATATGACATCATTGAACTCTCTTTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239015" ref_strand="+" ref_description="SGN-E239015 [cLEL-9-A17](-)">
      <seq>caatcaattcttaagcaggattacaaggatgatatcacaagggaagaggccgttcaacttgcctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgccttccaatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttacaactgcatgcatatttatgtcaaatgctttccagtttgaattttgttttggatttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43572" stop="44562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43872" g_stop="44262" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="393" polyA_stop="410"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E239015" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43872" e_stop="44262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTG-CTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGGATTTA</genome_strand>
        <mrna_strand>CAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239253" ref_strand="+" ref_description="SGN-E239253 [cLEL-9-A17](-)">
      <seq>gctcttaaagtgcttggtaagacaatggacagcactagcctcacttcggagaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgccttccaatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttacaactgcatgcatatttatgtcaaatgctttccagtttgaattttgttttggccttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43632" stop="44562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43932" g_stop="44257" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="331" polyA_stop="349"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E239253" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43932" e_stop="44257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGG</genome_strand>
        <mrna_strand>GCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E350766" ref_strand="+" ref_description="SGN-E350766 [cTOS-7-P5]">
      <seq>agaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgccttccaatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttacaactgcatgcatatttatgtcaaatgctttccagtttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43681" stop="44546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43981" g_stop="44245" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="266" polyA_stop="277"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E350766" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43981" e_stop="44245"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGA</genome_strand>
        <mrna_strand>AGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E356561" ref_strand="+" ref_description="SGN-E356561 [cTOS-21-I8]">
      <seq>agaaacttgaacttgctgaggtatttctctctaacgggaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgccttccaatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttacaactgcatgcatatttatgtcaaatgctttccagtttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43681" stop="44546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43981" g_stop="44245" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="266" polyA_stop="277"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E356561" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43981" e_stop="44245"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGA</genome_strand>
        <mrna_strand>AGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E352884" ref_strand="+" ref_description="SGN-E352884 [cTOS-11-F21]">
      <seq>gaaagtcaagtatcaagcatgctctcccgaaactctgaacaaaatgttggtgagtgctggactgactcaacctacagcagaagaatagtcgtagaatgccttccaatctagcatatgacatcattgaactctctctacgccatgtgtgacatgttgtactaaaactaagtggtggatttgtcttcttacaactgcatgcatatttatgtcaaatgctttccagtttgaattttgttttggatttacttcatcatttgttgttatcgtggtactttactgcatttgacatgtttgtgcctctgtttgcctgagaaagaaaagaacacacaaacataccctccatctttctcaattttaacttgatgcaactaccgtaggggaagaaggtgagatcttttcatcttgtagctatccattttaaacattatttccttcctccgactagtaactatttagtcctctaaagctctgaggattttggttatgtagtggtgattataccaaagcagaaggtatgatgattattcagaatggaaggaataatgtgcaagtagaaggtatgtttatcattttgatcgcatgaatgtctacctaaagcttatcatcatgacctctcacaaaaatgtaaaaacagttactttggacataatatcagatagtttcatatcataatataatggtaactattaccattttacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="43718" stop="45015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44018" g_stop="44717" g_length="700"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="700" r_length="700" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E352884" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44018" e_stop="44717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGGATTTACTTCATCATTTGTTGTTATCGTGGTACTTTACTGCATTTGACATGTTTGTGCCTCTGTTTGCCTGAGAAAGAAAAGAACACACAAACATACCCTCCATCTTTCTCAATTTTAACTTGATGCAACTACCGTAGGGGAAGAAGGTGAGATCTTTTCATCTTGTAGCTATCCATTTTAAACATTATTTCCTTCCTCCGACTAGTAACTATTTAGTCCTCTAAAGCTCTGAGGATTTTGGTTATGTAGTGGTGATTATACCAAAGCAGAAGGTATGATGATTATTCAGAATGGAAGGAATAATGTGCAAGTAGAAGGTATGTTTATCATTTTGATCGCATGAATGTCTACCTAAAGCTTATCATCATGACCTCTCACAAAAATGTAAAAACAGTTACTTTGGACATAATATCAGATAGTTTCATATCATAATATAATGTTAACTATTACCATTTACAAT</genome_strand>
        <mrna_strand>GAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGCAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGGATTTACTTCATCATTTGTTGTTATCGTGGTACTTTACTGCATTTGACATGTTTGTGCCTCTGTTTGCCTGAGAAAGAAAAGAACACACAAACATACCCTCCATCTTTCTCAATTTTAACTTGATGCAACTACCGTAGGGGAAGAAGGTGAGATCTTTTCATCTTGTAGCTATCCATTTTAAACATTATTTCCTTCCTCCGACTAGTAACTATTTAGTCCTCTAAAGCTCTGAGGATTTTGGTTATGTAGTGGTGATTATACCAAAGCAGAAGGTATGATGATTATTCAGAATGGAAGGAATAATGTGCAAGTAGAAGGTATGTTTATCATTTTGATCGCATGAATGTCTACCTAAAGCTTATCATCATGACCTCTCACAAAAATGTAAAAACAGTTACTTTGGACATAATATCAGATAGTTTCATATCATAATATAATGGTAACTATTACCATTTTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E326076" ref_strand="+" ref_description="SGN-E326076 [cTOC-16-D9]">
      <seq>cgaaactgtacacgtgatggtgggcgtagaaccatcaaactgacacatgttttttttaaaaataaatcaaagagattaattagtgtacaagagagagggaagtataaattattcttgtttggatcatccgcccttgaagaatctcaatctcttggcaatgggtgaagaaaaatggtgtgtggtgaccggcggaagaggctttgctgctcgacatttagtcgaaatgctcatccgctacgaaatttatcatgtacgcattggtgatttggggccaaccattaaacttgagcctcatgaggaaaagggtattcttggagaagccctcaaatctggtcgtgctgtatatgtatccatggatcttcttaacaagtcccaagtgttcaaagcttgtgaaggagctgaggttgttttccacatggctgctccagattcatcgatcaacaaccacaagctccactattcagttaatgtgcaaggaacccagaatataattgatgcttgcgttgagctgaaagtgaaaagacttatttacaccagctctcccagtgtggtgtttgatggagttactggaattctagatggggatgaatcactgccatatcctgcgaagcataatgattcctactctgcaactaaagctgaaggagaggcacttgtaatgaagtcaaatggtactaaaggcctgctgacatgctgcattagacctagcagtatttttggccctggtgataggttgctagttccttcactagtcgcggctgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="47843" stop="50635"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48143" g_stop="48528" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48529" i_stop="49733" i_length="1205">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49734" g_stop="49823" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="476" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49824" i_stop="49951" i_length="128">
            <donor d_prob="0.815" d_score="1.00"/>
            <acceptor a_prob="0.787" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49952" g_stop="50085" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="610" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50086" i_stop="50181" i_length="96">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50182" g_stop="50335" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="764" r_length="154" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E326076" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48143" e_stop="48528"/>
          <exon e_start="49734" e_stop="49823"/>
          <exon e_start="49952" e_stop="50085"/>
          <exon e_start="50182" e_stop="50335"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAACTGTACACGTGATGGTGGGCGTAGAACCATCAAACTGACACATGTTTTTTTTAAAAATAAATCAAAGAGATTAATTAGTGTACAAGAGAGAGGGAAGTATAAATTATTCTTGTTTGGATCATCCGCCCTTGAAGAATCTCAATCTCTTGGCAATGGGTGAAGAAAAATGGTGTGTGGTGACCGGCGGAAGAGGCTTTGCTGCTCGACATTTAGTCGAAATGCTCATCCGCTACGAAATTTATCATGTACGCATTGGTGATTTGGGGCCAACCATTAAACTTGAGCCTCATGAGGAAAAGGGTATTCTTGGAGAAGCCCTCAAATCTGGTCGTGCTGTATATGTATCCATGGATCTTCTTAACAAGTCCCAAGTGTTCAAAGGTTGTTTTCTTGAATCTTTTAGCTGTTTTTGACACCCAAAAATCAAATAGGTTTTGATTCTTGAATGTGGGTGTTTTGGTTTTATAAATCAGTTATTAATTGCCTAGTGCTCAAAGGTCTTTGCTTGAATCTTTAGTTGAATGTGGGTGTTTTGGTTTTATTATATGTTACTACTTGCCAAGTGCTCGAAGGTCTTTTCTTGAATCTTTAGTTGTTTTTGACAACCCAAAACCCAAAACTTTTTGGTTCTTGAATGTGGGTGTTTTGGTTTTATAAATCACTTACTACTTGCCAAGTGGTCAACGGTCTTTTCTTGAATCGTAAGTTGTTTATGTCACCCAAGAAACCAAAACTTTTTGATTCTTGAATAGGGGTGTTTTGGTTTTATATTAGTTAGTACTTGCCAAGTGCTCAACGATCTTTTCTTGAATCGTTAGTTGTTTTTTTATTCTTGAATATGGATGGTGCTATGATTCTATATTAGTTACTACTTGCCAAGCGTCCACAGGGGAAGAAATCACCTAACATTTTTGTGTCTGCCGGGATTTCAACCTAAAACATCAAGATTCTCAACCCACAGTCATTGATCAGTAGGCTACACCTTTGGGTGCTAGCCATAGTGTGGAATCAATTTGGTGGTTTAGTTCCAATTGTATCCATATAAAGTAAGCCTTGTATCAGATACTTTTGCTGAATTATCCTAGCTAAATTTTTTCAAGATTCATCTTTTCTGAGTTTAGCATTTGAGATGATACATGGAGTATTCCTTTGCCTCAATGTACTTATGTTAAATGAGTGTGATATGGTCATCAGTATTTCACATGAATCTTACATGATGTAGACAAAGTTGATTTACCTGTACCCACAGCTGTACTGGTTACTTACTGGTATCCATGCCCGGGTCTAAGTGATATAGGAGATAGACATTTTATGTCACAGCCAAATCATCCCAGCTAATGTTTCTAGACTCGTGTTTCTAAGTGTAATATACGATGGAGTATTCATTTGTCCTGAAGTATCTGTCCTGAATGAGTATTTCATGTGTATCTTTCAAGAAACGGTCGACATATACCTTCACGTACCCCTAACTATACCTGTACCAAGATACTTATCGCTCAACATGTATGTCTGTGTCAATGTCACATAGGTGATAACCTATTTTATTAACTTGTGGTGTCTTAACATTATTTATTTGATATTTGCAGCTTGTGAAGGAGCTGAGGTTGTTTTCCACATGGCTGCTCCAGATTCATCGATCAACAACCACAAGCTCCACTATTCAGTTAATGTGCAAGGTATGGGAAAGCCTTAAAAAATTTATCAAGAAAAAAAATGATCTCCCCAAAGTTAAGGCAGTCTTTGTTGTCTGTCTGTACATGAAAGTCTTAGTTCTCTCTTTCCAATTGCATAAATATACGTGAAGGAACCCAGAATATAATTGATGCTTGCGTTGAGCTGAAAGTGAAAAGACTTATTTACACCAGCTCTCCCAGTGTGGTGTTTGATGGAGTTACTGGAATTCTAGATGGGGATGAATCACTGCCATATCCTGCGAAGGTAGTGCCTCTATCTCCTTATTTCTTATTTGAATGAGAAATTATCCTCATATTAGGTTGGATGATAACCATATTCTTGTTACTGGAAAAAATTCAGCATAATGATTCCTACTCTGCAACTAAAGCTGAAGGAGAGGCACTTGTAATGAAGTCAAATGGTACTAAAGGCCTGCTGACATGCTGCATTAGACCTAGCAGTATTTTTGGCCCTGGTGATAGGTTGCTAGTTCCTTCACTAGTCGCGGCTGCAA</genome_strand>
        <mrna_strand>CGAAACTGTACACGTGATGGTGGGCGTAGAACCATCAAACTGACACATGTTTTTTTTAAAAATAAATCAAAGAGATTAATTAGTGTACAAGAGAGAGGGAAGTATAAATTATTCTTGTTTGGATCATCCGCCCTTGAAGAATCTCAATCTCTTGGCAATGGGTGAAGAAAAATGGTGTGTGGTGACCGGCGGAAGAGGCTTTGCTGCTCGACATTTAGTCGAAATGCTCATCCGCTACGAAATTTATCATGTACGCATTGGTGATTTGGGGCCAACCATTAAACTTGAGCCTCATGAGGAAAAGGGTATTCTTGGAGAAGCCCTCAAATCTGGTCGTGCTGTATATGTATCCATGGATCTTCTTAACAAGTCCCAAGTGTTCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGAAGGAGCTGAGGTTGTTTTCCACATGGCTGCTCCAGATTCATCGATCAACAACCACAAGCTCCACTATTCAGTTAATGTGCAAG................................................................................................................................GAACCCAGAATATAATTGATGCTTGCGTTGAGCTGAAAGTGAAAAGACTTATTTACACCAGCTCTCCCAGTGTGGTGTTTGATGGAGTTACTGGAATTCTAGATGGGGATGAATCACTGCCATATCCTGCGAAG................................................................................................CATAATGATTCCTACTCTGCAACTAAAGCTGAAGGAGAGGCACTTGTAATGAAGTCAAATGGTACTAAAGGCCTGCTGACATGCTGCATTAGACCTAGCAGTATTTTTGGCCCTGGTGATAGGTTGCTAGTTCCTTCACTAGTCGCGGCTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E321383" ref_strand="+" ref_description="SGN-E321383 [cTOB-23-P8]">
      <seq>tgtacacgtgatggtgggcgtagaaccatcaaactgacacatgttttttttaaaaataaatcaaagagattaattagtgtacaagagagagggaagtataaattattcttgtttggatcatccgcccttgaagaatctcaatctcttggcaatgggtgaagaaaaatggtgtgtggtgaccggcggaagaggctttgctgctcgacatttagtcgaaatgctcatccgctacgaaatttatcatgtacgcattggtgatttggggccaaccattaaacttgagcctcatgaggaaaagggtattcttggagaagccctcaaatctggtcgtgctgtatatgtatccatggatcttcttaacaagtcccaagtgttcaaagcttgtgaaggagctgaggttgttttccacatggctgctccagattcatcgatcaacaaccacaagctccactattcagttaatgtgcaaggaacccagaatataattgatgcttgcgttgagctgaaagtgaaaagacttatttacaccagctctcccagtgtggtgtttgatggagttactggaattctagatggggatgaatcactgccatatcctgcgaagcataatgattcctactctgcaactaaagctgaaggagaggcacttgtaatgaagtcaaatggtactaaaggcctgctgacatgctgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="47849" stop="50570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48149" g_stop="48528" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48529" i_stop="49733" i_length="1205">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49734" g_stop="49823" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="470" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49824" i_stop="49951" i_length="128">
            <donor d_prob="0.815" d_score="1.00"/>
            <acceptor a_prob="0.787" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49952" g_stop="50085" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="604" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50086" i_stop="50181" i_length="96">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50182" g_stop="50270" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="693" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E321383" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321383" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48149" e_stop="48528"/>
          <exon e_start="49734" e_stop="49823"/>
          <exon e_start="49952" e_stop="50085"/>
          <exon e_start="50182" e_stop="50270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTACACGTGATGGTGGGCGTAGAACCATCAAACTGACACATGTTTTTTTTAAAAATAAATCAAAGAGATTAATTAGTGTACAAGAGAGAGGGAAGTATAAATTATTCTTGTTTGGATCATCCGCCCTTGAAGAATCTCAATCTCTTGGCAATGGGTGAAGAAAAATGGTGTGTGGTGACCGGCGGAAGAGGCTTTGCTGCTCGACATTTAGTCGAAATGCTCATCCGCTACGAAATTTATCATGTACGCATTGGTGATTTGGGGCCAACCATTAAACTTGAGCCTCATGAGGAAAAGGGTATTCTTGGAGAAGCCCTCAAATCTGGTCGTGCTGTATATGTATCCATGGATCTTCTTAACAAGTCCCAAGTGTTCAAAGGTTGTTTTCTTGAATCTTTTAGCTGTTTTTGACACCCAAAAATCAAATAGGTTTTGATTCTTGAATGTGGGTGTTTTGGTTTTATAAATCAGTTATTAATTGCCTAGTGCTCAAAGGTCTTTGCTTGAATCTTTAGTTGAATGTGGGTGTTTTGGTTTTATTATATGTTACTACTTGCCAAGTGCTCGAAGGTCTTTTCTTGAATCTTTAGTTGTTTTTGACAACCCAAAACCCAAAACTTTTTGGTTCTTGAATGTGGGTGTTTTGGTTTTATAAATCACTTACTACTTGCCAAGTGGTCAACGGTCTTTTCTTGAATCGTAAGTTGTTTATGTCACCCAAGAAACCAAAACTTTTTGATTCTTGAATAGGGGTGTTTTGGTTTTATATTAGTTAGTACTTGCCAAGTGCTCAACGATCTTTTCTTGAATCGTTAGTTGTTTTTTTATTCTTGAATATGGATGGTGCTATGATTCTATATTAGTTACTACTTGCCAAGCGTCCACAGGGGAAGAAATCACCTAACATTTTTGTGTCTGCCGGGATTTCAACCTAAAACATCAAGATTCTCAACCCACAGTCATTGATCAGTAGGCTACACCTTTGGGTGCTAGCCATAGTGTGGAATCAATTTGGTGGTTTAGTTCCAATTGTATCCATATAAAGTAAGCCTTGTATCAGATACTTTTGCTGAATTATCCTAGCTAAATTTTTTCAAGATTCATCTTTTCTGAGTTTAGCATTTGAGATGATACATGGAGTATTCCTTTGCCTCAATGTACTTATGTTAAATGAGTGTGATATGGTCATCAGTATTTCACATGAATCTTACATGATGTAGACAAAGTTGATTTACCTGTACCCACAGCTGTACTGGTTACTTACTGGTATCCATGCCCGGGTCTAAGTGATATAGGAGATAGACATTTTATGTCACAGCCAAATCATCCCAGCTAATGTTTCTAGACTCGTGTTTCTAAGTGTAATATACGATGGAGTATTCATTTGTCCTGAAGTATCTGTCCTGAATGAGTATTTCATGTGTATCTTTCAAGAAACGGTCGACATATACCTTCACGTACCCCTAACTATACCTGTACCAAGATACTTATCGCTCAACATGTATGTCTGTGTCAATGTCACATAGGTGATAACCTATTTTATTAACTTGTGGTGTCTTAACATTATTTATTTGATATTTGCAGCTTGTGAAGGAGCTGAGGTTGTTTTCCACATGGCTGCTCCAGATTCATCGATCAACAACCACAAGCTCCACTATTCAGTTAATGTGCAAGGTATGGGAAAGCCTTAAAAAATTTATCAAGAAAAAAAATGATCTCCCCAAAGTTAAGGCAGTCTTTGTTGTCTGTCTGTACATGAAAGTCTTAGTTCTCTCTTTCCAATTGCATAAATATACGTGAAGGAACCCAGAATATAATTGATGCTTGCGTTGAGCTGAAAGTGAAAAGACTTATTTACACCAGCTCTCCCAGTGTGGTGTTTGATGGAGTTACTGGAATTCTAGATGGGGATGAATCACTGCCATATCCTGCGAAGGTAGTGCCTCTATCTCCTTATTTCTTATTTGAATGAGAAATTATCCTCATATTAGGTTGGATGATAACCATATTCTTGTTACTGGAAAAAATTCAGCATAATGATTCCTACTCTGCAACTAAAGCTGAAGGAGAGGCACTTGTAATGAAGTCAAATGGTACTAAAGGCCTGCTGACATGCTGCAT</genome_strand>
        <mrna_strand>TGTACACGTGATGGTGGGCGTAGAACCATCAAACTGACACATGTTTTTTTTAAAAATAAATCAAAGAGATTAATTAGTGTACAAGAGAGAGGGAAGTATAAATTATTCTTGTTTGGATCATCCGCCCTTGAAGAATCTCAATCTCTTGGCAATGGGTGAAGAAAAATGGTGTGTGGTGACCGGCGGAAGAGGCTTTGCTGCTCGACATTTAGTCGAAATGCTCATCCGCTACGAAATTTATCATGTACGCATTGGTGATTTGGGGCCAACCATTAAACTTGAGCCTCATGAGGAAAAGGGTATTCTTGGAGAAGCCCTCAAATCTGGTCGTGCTGTATATGTATCCATGGATCTTCTTAACAAGTCCCAAGTGTTCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGAAGGAGCTGAGGTTGTTTTCCACATGGCTGCTCCAGATTCATCGATCAACAACCACAAGCTCCACTATTCAGTTAATGTGCAAG................................................................................................................................GAACCCAGAATATAATTGATGCTTGCGTTGAGCTGAAAGTGAAAAGACTTATTTACACCAGCTCTCCCAGTGTGGTGTTTGATGGAGTTACTGGAATTCTAGATGGGGATGAATCACTGCCATATCCTGCGAAG................................................................................................CATAATGATTCCTACTCTGCAACTAAAGCTGAAGGAGAGGCACTTGTAATGAAGTCAAATGGTACTAAAGGCCTGCTGACATGCTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745652" ref_strand="+" ref_description="SGN-E745652 [GI|47105218]">
      <seq>ggagggaagtataaattattcttgtttggatcatccgcccttgaagaatctcaatctcttggcaatgggtgaagaaaaatggtgtgtggtgaccggcggaagaggctttgctgctcgacatttagtcgaaatgctcatccgctacgaaatttatcatgtacgcattggtgatttggggccaaccattaaacttgagcctcatgaggaaaagggtattcttggagaagccctcaaatctggtcgtgctgtatatgtatccatggatcttcttaacaagtcccaagtgttcaaagcttgtgaaggagctgaggttgttttccacatggctgctccagattcatcgatcaacaaccacaagctccactattcagttaatgtgcaaggaacccagaatataattgatgcttgcgttgagctgaaagtgaaaagacttatttacaccagctctcccagtgtggtgtttgatggagttactgggattctagatggggatgaatcactgccatatcctgcgaagcataatgattcctactctgcaactaaagctgaaggagaggcacttgtaatgaagtcaaatggtactaaaggcctgctgacatgctgcattagacctagcagtatttttggccctggtgataggttgctagttccttcactagtcgcggctgcaagggctggaaaatctaagttcattattggcgacggaaataacctgtatgatttcacttacgtggagaatgtggcacatgcacatgtgtgtgcggaacgagctctagcatcaggaggaacagcagcagagaaagctgctgggaacgcttatttcatcacaaacacggagtccattaagttttgggagttcgtatcacttattcttgaaggtcttggctatgacaggccaagtattaagattcctgcacctgttatgatgccaattgcacatttggtggaactgacttataagctgttagcaccttatggaatgaaggtcccacagttgactccttcgagaataagacttctctctatgagcagaacatttagtagttcaaaagcaagtgaccaactaggatacgcacctatcgtcactcttcaggagggcataaggaggaccattgaatcctatccacatctgagagctgaacacgggtcgggaaaggatggtcctaaatcatctgcatctcttaaacggtttttcctcctggtgattttctttctattaattctaagcgtacttgggatcatttcaccatggagtttttttcgtcataggaatcttagctgcctttgttgtgttcttgatatttgacaaaagcaagaagaattagatcatttagttcatgcagtatttggtctagcattgatgggagaacatccaactcttaattaaaaaaaacaacgatggggcgtgcagcatcattcactcattggagcctcacttgagagaagttgtgtttacatcctggagttgctatatagtaaggtgctttttaccaagccagttattttagtttttgttgtatttgtttattttggtacattggtaaagagtactaactaaaagtttttaaaacctttgataagctacataagctatctatcgtaagtttcaaaagttttcttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="47937" stop="55490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48236" g_stop="48528" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48529" i_stop="49733" i_length="1205">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49734" g_stop="49823" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="383" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49824" i_stop="49951" i_length="128">
            <donor d_prob="0.815" d_score="1.00"/>
            <acceptor a_prob="0.787" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49952" g_stop="50085" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="517" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50086" i_stop="50181" i_length="96">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50182" g_stop="50352" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="688" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="50353" i_stop="50649" i_length="297">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50650" g_stop="50775" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="814" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50776" i_stop="51972" i_length="1197">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.674" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51973" g_stop="52052" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="815" r_stop="894" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="52053" i_stop="53116" i_length="1064">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="53117" g_stop="53315" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="895" r_stop="1093" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="53316" i_stop="53811" i_length="496">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="53812" g_stop="53919" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1094" r_stop="1201" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="53920" i_stop="54583" i_length="664">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.678" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="54584" g_stop="54650" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1202" r_stop="1269" r_length="68" r_score="0.970"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="54651" i_stop="54837" i_length="187">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="54838" g_stop="55189" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1270" r_stop="1621" r_length="352" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1622" polyA_stop="1638"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E745652" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1620</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48236" e_stop="48528"/>
          <exon e_start="49734" e_stop="49823"/>
          <exon e_start="49952" e_stop="50085"/>
          <exon e_start="50182" e_stop="50352"/>
          <exon e_start="50650" e_stop="50775"/>
          <exon e_start="51973" e_stop="52052"/>
          <exon e_start="53117" e_stop="53315"/>
          <exon e_start="53812" e_stop="53919"/>
          <exon e_start="54584" e_stop="54650"/>
          <exon e_start="54838" e_stop="55189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGGAAGTATAAATTATTCTTGTTTGGATCATCCGCCCTTGAAGAATCTCAATCTCTTGGCAATGGGTGAAGAAAAATGGTGTGTGGTGACCGGCGGAAGAGGCTTTGCTGCTCGACATTTAGTCGAAATGCTCATCCGCTACGAAATTTATCATGTACGCATTGGTGATTTGGGGCCAACCATTAAACTTGAGCCTCATGAGGAAAAGGGTATTCTTGGAGAAGCCCTCAAATCTGGTCGTGCTGTATATGTATCCATGGATCTTCTTAACAAGTCCCAAGTGTTCAAAGGTTGTTTTCTTGAATCTTTTAGCTGTTTTTGACACCCAAAAATCAAATAGGTTTTGATTCTTGAATGTGGGTGTTTTGGTTTTATAAATCAGTTATTAATTGCCTAGTGCTCAAAGGTCTTTGCTTGAATCTTTAGTTGAATGTGGGTGTTTTGGTTTTATTATATGTTACTACTTGCCAAGTGCTCGAAGGTCTTTTCTTGAATCTTTAGTTGTTTTTGACAACCCAAAACCCAAAACTTTTTGGTTCTTGAATGTGGGTGTTTTGGTTTTATAAATCACTTACTACTTGCCAAGTGGTCAACGGTCTTTTCTTGAATCGTAAGTTGTTTATGTCACCCAAGAAACCAAAACTTTTTGATTCTTGAATAGGGGTGTTTTGGTTTTATATTAGTTAGTACTTGCCAAGTGCTCAACGATCTTTTCTTGAATCGTTAGTTGTTTTTTTATTCTTGAATATGGATGGTGCTATGATTCTATATTAGTTACTACTTGCCAAGCGTCCACAGGGGAAGAAATCACCTAACATTTTTGTGTCTGCCGGGATTTCAACCTAAAACATCAAGATTCTCAACCCACAGTCATTGATCAGTAGGCTACACCTTTGGGTGCTAGCCATAGTGTGGAATCAATTTGGTGGTTTAGTTCCAATTGTATCCATATAAAGTAAGCCTTGTATCAGATACTTTTGCTGAATTATCCTAGCTAAATTTTTTCAAGATTCATCTTTTCTGAGTTTAGCATTTGAGATGATACATGGAGTATTCCTTTGCCTCAATGTACTTATGTTAAATGAGTGTGATATGGTCATCAGTATTTCACATGAATCTTACATGATGTAGACAAAGTTGATTTACCTGTACCCACAGCTGTACTGGTTACTTACTGGTATCCATGCCCGGGTCTAAGTGATATAGGAGATAGACATTTTATGTCACAGCCAAATCATCCCAGCTAATGTTTCTAGACTCGTGTTTCTAAGTGTAATATACGATGGAGTATTCATTTGTCCTGAAGTATCTGTCCTGAATGAGTATTTCATGTGTATCTTTCAAGAAACGGTCGACATATACCTTCACGTACCCCTAACTATACCTGTACCAAGATACTTATCGCTCAACATGTATGTCTGTGTCAATGTCACATAGGTGATAACCTATTTTATTAACTTGTGGTGTCTTAACATTATTTATTTGATATTTGCAGCTTGTGAAGGAGCTGAGGTTGTTTTCCACATGGCTGCTCCAGATTCATCGATCAACAACCACAAGCTCCACTATTCAGTTAATGTGCAAGGTATGGGAAAGCCTTAAAAAATTTATCAAGAAAAAAAATGATCTCCCCAAAGTTAAGGCAGTCTTTGTTGTCTGTCTGTACATGAAAGTCTTAGTTCTCTCTTTCCAATTGCATAAATATACGTGAAGGAACCCAGAATATAATTGATGCTTGCGTTGAGCTGAAAGTGAAAAGACTTATTTACACCAGCTCTCCCAGTGTGGTGTTTGATGGAGTTACTGGAATTCTAGATGGGGATGAATCACTGCCATATCCTGCGAAGGTAGTGCCTCTATCTCCTTATTTCTTATTTGAATGAGAAATTATCCTCATATTAGGTTGGATGATAACCATATTCTTGTTACTGGAAAAAATTCAGCATAATGATTCCTACTCTGCAACTAAAGCTGAAGGAGAGGCACTTGTAATGAAGTCAAATGGTACTAAAGGCCTGCTGACATGCTGCATTAGACCTAGCAGTATTTTTGGCCCTGGTGATAGGTTGCTAGTTCCTTCACTAGTCGCGGCTGCAAGGGCTGGAAAATCTAAGGTGAGTTTAGAGCCATATTTTGTTTGCACATGCATCTTTCAAGTCTGTGTAACATTCGTATTATATGCAAGCCTTTATTCGTATTGGTTTACTGTTGTAGTGCTTGTAAGCTTGTAAGCCATTGATTAGAAAATCTATCTTGAGGAACTTCATTAGTGATTTCTGCATTCTCTTCCATAGCACAACAATGAGATCACTTTTTGGCATTTTCGTGGACAAATTGAATTTAACCTAGAAGACTTGCACTATGTATTCAGTTGACTTTTAGCTTTATTCCTCTAATTCTTAATTTTGCAGTTCATTATTGGCGACGGAAATAACCTGTATGATTTCACTTACGTGGAGAATGTGGCACATGCACATGTGTGTGCGGAACGAGCTCTAGCATCAGGAGGAACAGCAGCAGAGAAAGCTGCTGGGAACGTAATGTTTCATTGTTTTTCCATATTCTGTATTTTTTGGAAAATCTTAATACTAGCAACTATACAGATCTGACCTGTCCAGATGCTTTAATATCAAGAGCATTTCTGTTCTTCAAATTTTTTAAGAAGTGGCCTCAATGCATGGATAAGCAGTGCAATGGATATTTTTGAGTTCCCATTCAAGTTTCATCTGTTTCTTGTATCCATCCTACATGATTGTGATGTGTTTGTGAAAAAGTGATTGACCTGATCCCATGCAGCAATAAAGCTTGAGCTATCTTAACAATCAAATACATAAATAAAACTTGAGCTATCTGGATTAAGTTTTACCTAAATGATGCTGAACTTTAGCTAGTGATGATTCCATGAAAAGCTGAATTCTCTAAGGGTTCTAACCATTTAAGATTACCAACTGTTGTGTTGCCATAATTAGCTTTTCTTTCTCTAGAAGTAATAATTCCCTGTTTTCGACTTCTCTCGCCTTCTCTTGAAACCATATCCTGAACACTAATTAGTGCAATCTTTATTTAGTACATTACATAGAATTACCAAAAAGATTGTCCTTAAGTACAACCAAACAACAAAATTTTTGTATCTTAGTTCATAGATTTCAACAGTTGTTCTATGTTGACAGACTTTGTATCTTTGTTGTAGAGTTGTGCGCACAATCTAAGTGCTTACTGCTTACCTTTTGATAATTAAATTTACTTTACCATTTCAAAATAATTTGTTGCTTAAACCATATTATGTCAATAACTAGGAGGGGTAAGACTTGCGCATCCATTGCACTCGGGCCTATAGTTGTGCAGAAAACATTGAAATAAGAGCCACCTTGTCGGTTGTCCTTCTCTTTTTCTGGGAAGGAGGAACTCCACCATTGTGCGAAGTCATAATTCTCTCAGCAAGCATTCGAAAAAGGAATACCTCTCTTGTTTTCCATTTCTTTTGCTAGTAAAAAAGTATGATTTTCTTCTCCCCACTATCTCATCTCTCTGTGTTTCTCATATTTTAAGGTGTGGGGATTGGGGTAAAGCTAGATATCAAAATGATTGACATGCACTAAGCTTATGAGTATACATGTTTTCTTACATCTCCTGGAGTCCCCGTGAAAAAAAGTTCTGCTTGTTATGAGATTTATCAATTCTTGAACGCGGCTTTTTTTTTTGACAAATCTTTGATCAATAAATGATTTTTCCAGGCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAGGTATTCTCATTTCAAGTTCTGAAGTCTGAAAAGATTTCTTGCTCACAGTAATTCTTTTTACAATTTTTTATATCTTGTAATGTTTACCTTAATTTTCTTATGGTGAACAATCTTTGAAATTTCATTACAGGGTTGTTCCTCTTTAGCTGATTCCTGGAACTATACTTATTAAATCACTTTATTTGTAATTCTGGAATAGAATGTGATTACCGGAAAGGTTCAAGTTAAGAGATGAAGAAAACAATATCCTTGGCCACATAGAAGAACTAGTGAGAAATTTCATAAAGGAAATAGAGCATTAAAGTTTTGCATTCATCCATTGCCTCTTGAAATTACAATTAAAGAATTACCTGTTAGAAAACTTTGAGATCTCGTGTTGATTCATCCTGAGCAAGGAAACTTTGTTTCTTAAATTTAGATTAAGAGCAGCATTCTTCCATAATTTTTTCTGCTTTTCTCCTTTCTTCATGGATGGAGATGTTTCTACAGAACATGCTTAATCAATTTAGGTTTGTTGCTGACAATCAAACTTGAGAAAAACATTCAGTTTGCTTGTCAGAAGAGCTATTTAATGGGTCTGAATGTTTGTACGAGTGAATGAGAGTTTGTAACTGTACCAACCGTTATATGGTTCCTAGCCAATTGAGGCGGTGTATTCTTTACCATTGGTATTTGGAGATACATATGATATATAGAGCAGTACTTGTCCATTAAAACATATGTTTTATAAACCTCATCTCTTCTGAGAAGAAAAATGGGTCGTACACCTCCAACTATAAAGCTGGTGGTTCTGAGTCACAGAGGAAGCAAAGATAGGGCCACAGTAAACTCGTGTATGGGGTGCTTGCCTGAGGGATTACTAGATTAAACAAAAAAATTGTTGTTTGTATTAGCATGATTTGTTGTTATGGAGCTAACATCTCCACTTTTTTAACTGTGCATGTCCTTTATGGAAAATCACTGTTTGCTTTATGTTCTTGTGGATAGCATCTGTCTTCCAAATCCCGTTTTTCCCATTTCTTTTGCTGTGAATTGTATGGATTCCTGATTTTAGTATTATGCAGGCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTATCGTCACTCTTCAGGTTCCATTTTTTGCCATTACACTCAATCAATTGGTCTGAACATTCCTCATAAAAATTGTTTAGCCATACCATGTCTATATCAGATACTCCCAACCTTTTTAGGTACTGTTATGGTCTTCTCTTTATTGCTGTATCTCTTTTCAGCTTCCTCGTGAATATTTTCATGTGAAAAGAATATGTTTAAGTATTTACTGCAAAAATTGTATTATTTGCCTTTGATATTGAATACGAGAAAATAGTCATTCATCTGGATGTCCACATCATTACTGCAGGAATACACACATTTTCCTGTCAAATATGTTGTACATGTAACTTACATTTCATATAAGATGATATTAGTTGTCATATTTGTACCTTATATCTTCTACGAACTAAAATTACTATTTTTCTGTGGAGCCTCATCTTTTACAATCTATTATTTTCTGCCATTTCTTTTTGTTTTTTATTCTCATTACATAATTCATTTAAGTTTTAAGGCGTCCTCTATTTTCTTCAGGAGGGCATAAGGAGGACCATTGAATCCTATCCACATCTGAGAGCTGAACACGGGTCGGGAAAGGATGGTCCTAAATCATCTGCATCTCTTAAACGGTTTTTCCTCCTGGTAATTACTAATACATATTAATCCATTTGTTGTGAGAGAAAAAATGTGATAGACACCTTACTATTTCATTTCAGAAGTTAATTTAAAACCATGGTCATTACTTATATGGTTATGAATTGAATAGGCATGCCTTTTCTGCTAAACTACATACGTACTCCAAGTATAACTATCATTTGAAATTTCTTACCTTTTCTTTTGGTCCATCCAATCTATTTTACAAAACAACATTGTATGATGATGTCCAAGAATATTTGACCCTTTAAAATAACTTTCATAAGTTTCAAGAATTCAATTTCATATAATAGTGTATATTCAATCAGTAGCAGTGGTACTTTCTCAATCGAAATATTTATTAATCAATCAACTATCTCTCAATCCCAAATTGCTTCAGATCGACTATGATGGTTTGGCCTTGTCCATGGAGATGGAATCCATTACTTGCCATATATCAGAAGGAACATTTTGTATTGTTATTGGATGATTACTAATTACTAATTATGATCAAGTGTAATGATCCAAGGATAAATTGTGAAATGTGAAATCTTTCTAATCATTCCTGCTCCTCTTGGCTAGAAGTAATAGGAGTAGCTATATCTGTATCATGCTGTGAACTCGCATTTTCATCTATTAAATTGTGATATCTTTCATCTGGCTGATGTAATAGGTGATTTTCTTTCTATTAATTCTAAGCGTACTTGGGATCATTTCACCATGGAG-TTTTTTCGTCATAGGTATGCACTCTTCTCTATCTCCTCCTGTCCATATCATTTACGCTTGCTTGTAACTTGGTCAAACACTCTATTGTGCCCAGAAGAGTTTTTTCTGTTTCTCTTCATAGCAGATGTAAATAACACTCCAAACAATGTAAGCTGGTATCCCATCTTCAGTGCTCTGACCTTCTCATGTTTACTGCTGCAGGAATCTTAGCTGCCTTTGTTGTGTTCTTGATATTTGACAAAAGCAAGAAGAATTAGATCATTTAGTTCATGCAGTATTTGGTCTAGCATTGATGGGAGAACATCCAACTCTTAATTAAAAAAAACAACGATGGGGCGTGCAGCATCATTCACTCATTGGAGCCTCACTTGAGAGAAGTTGTGTTTACATCCTGGAGTTGCTATATAGTAAGGTGCTTTTTACCAAGCCAGTTATTTTAGTTTTTGTTGTATTTGTTTATTTTGGTACATTGGTAAAGAGTACTAACTAAAAGTTTTTAAAACCTTTGATAAGCTACATAAGCTATCTATCGTAAGTTTCAAAAGTTTTCTTT</genome_strand>
        <mrna_strand>GGAGGGAAGTATAAATTATTCTTGTTTGGATCATCCGCCCTTGAAGAATCTCAATCTCTTGGCAATGGGTGAAGAAAAATGGTGTGTGGTGACCGGCGGAAGAGGCTTTGCTGCTCGACATTTAGTCGAAATGCTCATCCGCTACGAAATTTATCATGTACGCATTGGTGATTTGGGGCCAACCATTAAACTTGAGCCTCATGAGGAAAAGGGTATTCTTGGAGAAGCCCTCAAATCTGGTCGTGCTGTATATGTATCCATGGATCTTCTTAACAAGTCCCAAGTGTTCAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTGAAGGAGCTGAGGTTGTTTTCCACATGGCTGCTCCAGATTCATCGATCAACAACCACAAGCTCCACTATTCAGTTAATGTGCAAG................................................................................................................................GAACCCAGAATATAATTGATGCTTGCGTTGAGCTGAAAGTGAAAAGACTTATTTACACCAGCTCTCCCAGTGTGGTGTTTGATGGAGTTACTGGGATTCTAGATGGGGATGAATCACTGCCATATCCTGCGAAG................................................................................................CATAATGATTCCTACTCTGCAACTAAAGCTGAAGGAGAGGCACTTGTAATGAAGTCAAATGGTACTAAAGGCCTGCTGACATGCTGCATTAGACCTAGCAGTATTTTTGGCCCTGGTGATAGGTTGCTAGTTCCTTCACTAGTCGCGGCTGCAAGGGCTGGAAAATCTAAG.........................................................................................................................................................................................................................................................................................................TTCATTATTGGCGACGGAAATAACCTGTATGATTTCACTTACGTGGAGAATGTGGCACATGCACATGTGTGTGCGGAACGAGCTCTAGCATCAGGAGGAACAGCAGCAGAGAAAGCTGCTGGGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTATCGTCACTCTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCATAAGGAGGACCATTGAATCCTATCCACATCTGAGAGCTGAACACGGGTCGGGAAAGGATGGTCCTAAATCATCTGCATCTCTTAAACGGTTTTTCCTCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTTTCTTTCTATTAATTCTAAGCGTACTTGGGATCATTTCACCATGGAGTTTTTTTCGTCATAG...........................................................................................................................................................................................GAATCTTAGCTGCCTTTGTTGTGTTCTTGATATTTGACAAAAGCAAGAAGAATTAGATCATTTAGTTCATGCAGTATTTGGTCTAGCATTGATGGGAGAACATCCAACTCTTAATTAAAAAAAACAACGATGGGGCGTGCAGCATCATTCACTCATTGGAGCCTCACTTGAGAGAAGTTGTGTTTACATCCTGGAGTTGCTATATAGTAAGGTGCTTTTTACCAAGCCAGTTATTTTAGTTTTTGTTGTATTTGTTTATTTTGGTACATTGGTAAAGAGTACTAACTAAAAGTTTTTAAAACCTTTGATAAGCTACATAAGCTATCTATCGTAAGTTTCAAAAGTTTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E692531" ref_strand="+" ref_description="SGN-E692531 [LH_Ea08P09]">
      <seq>gtcccttgagactaaaggcctgctgacgtgctgcattagacctagcagtatttttggccctggtgataggttgctacccccttcactattcgcagctgcaagggctggaaaatctaagttcattattggtgatggaaataacctgtatgatttcacttacgtggagaatgtggcacatgcgcatgtgtgtgcagaacgagctctagcatcatgaggaacagctgcagataaagcagctgggaacgcttatttcgtcacaaacatggagtccattaagttttgggagttcgtatcacttattcatgaaggtcttggctatgacaggccaagtattaatattcctgcacctgttatgatgccaattgcacatttggtggaactgacttataagctgttatcaccttatggaatgaatgtcccgcagctgactccttcgagaataagacttctctctatgagcagaacatttactagttcaaaagcaagtgaccgactaggatacgcacctatcgtcacacttcaggagggcatatggaggaccattgaatcctatccacatctgatagctgaacactggccgggaaaggatggtcctaaatcatctgcatctcttattaaacggattttcctcctggagattttctctctattaattctaagcatacttgggatcatttcaccatggagtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="49941" stop="54940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50235" g_stop="50352" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50353" i_stop="50649" i_length="297">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50650" g_stop="50775" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="244" r_length="126" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50776" i_stop="51972" i_length="1197">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.674" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51973" g_stop="52052" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="324" r_length="80" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52053" i_stop="53116" i_length="1064">
            <donor d_prob="0.941" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53117" g_stop="53315" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="523" r_length="199" r_score="0.960"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53316" i_stop="53811" i_length="496">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53812" g_stop="53919" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="634" r_length="111" r_score="0.898"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53920" i_stop="54583" i_length="664">
            <donor d_prob="0.939" d_score="0.85"/>
            <acceptor a_prob="0.678" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54584" g_stop="54640" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="691" r_length="57" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E692531" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E692531" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50235" e_stop="50352"/>
          <exon e_start="50650" e_stop="50775"/>
          <exon e_start="51973" e_stop="52052"/>
          <exon e_start="53117" e_stop="53315"/>
          <exon e_start="53812" e_stop="53919"/>
          <exon e_start="54584" e_stop="54640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAATGGTACTAAAGGCCTGCTGACATGCTGCATTAGACCTAGCAGTATTTTTGGCCCTGGTGATAGGTTGCTAGTTCCTTCACTAGTCGCGGCTGCAAGGGCTGGAAAATCTAAGGTGAGTTTAGAGCCATATTTTGTTTGCACATGCATCTTTCAAGTCTGTGTAACATTCGTATTATATGCAAGCCTTTATTCGTATTGGTTTACTGTTGTAGTGCTTGTAAGCTTGTAAGCCATTGATTAGAAAATCTATCTTGAGGAACTTCATTAGTGATTTCTGCATTCTCTTCCATAGCACAACAATGAGATCACTTTTTGGCATTTTCGTGGACAAATTGAATTTAACCTAGAAGACTTGCACTATGTATTCAGTTGACTTTTAGCTTTATTCCTCTAATTCTTAATTTTGCAGTTCATTATTGGCGACGGAAATAACCTGTATGATTTCACTTACGTGGAGAATGTGGCACATGCACATGTGTGTGCGGAACGAGCTCTAGCATCAGGAGGAACAGCAGCAGAGAAAGCTGCTGGGAACGTAATGTTTCATTGTTTTTCCATATTCTGTATTTTTTGGAAAATCTTAATACTAGCAACTATACAGATCTGACCTGTCCAGATGCTTTAATATCAAGAGCATTTCTGTTCTTCAAATTTTTTAAGAAGTGGCCTCAATGCATGGATAAGCAGTGCAATGGATATTTTTGAGTTCCCATTCAAGTTTCATCTGTTTCTTGTATCCATCCTACATGATTGTGATGTGTTTGTGAAAAAGTGATTGACCTGATCCCATGCAGCAATAAAGCTTGAGCTATCTTAACAATCAAATACATAAATAAAACTTGAGCTATCTGGATTAAGTTTTACCTAAATGATGCTGAACTTTAGCTAGTGATGATTCCATGAAAAGCTGAATTCTCTAAGGGTTCTAACCATTTAAGATTACCAACTGTTGTGTTGCCATAATTAGCTTTTCTTTCTCTAGAAGTAATAATTCCCTGTTTTCGACTTCTCTCGCCTTCTCTTGAAACCATATCCTGAACACTAATTAGTGCAATCTTTATTTAGTACATTACATAGAATTACCAAAAAGATTGTCCTTAAGTACAACCAAACAACAAAATTTTTGTATCTTAGTTCATAGATTTCAACAGTTGTTCTATGTTGACAGACTTTGTATCTTTGTTGTAGAGTTGTGCGCACAATCTAAGTGCTTACTGCTTACCTTTTGATAATTAAATTTACTTTACCATTTCAAAATAATTTGTTGCTTAAACCATATTATGTCAATAACTAGGAGGGGTAAGACTTGCGCATCCATTGCACTCGGGCCTATAGTTGTGCAGAAAACATTGAAATAAGAGCCACCTTGTCGGTTGTCCTTCTCTTTTTCTGGGAAGGAGGAACTCCACCATTGTGCGAAGTCATAATTCTCTCAGCAAGCATTCGAAAAAGGAATACCTCTCTTGTTTTCCATTTCTTTTGCTAGTAAAAAAGTATGATTTTCTTCTCCCCACTATCTCATCTCTCTGTGTTTCTCATATTTTAAGGTGTGGGGATTGGGGTAAAGCTAGATATCAAAATGATTGACATGCACTAAGCTTATGAGTATACATGTTTTCTTACATCTCCTGGAGTCCCCGTGAAAAAAAGTTCTGCTTGTTATGAGATTTATCAATTCTTGAACGCGGCTTTTTTTTTTGACAAATCTTTGATCAATAAATGATTTTTCCAGGCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAGGTATTCTCATTTCAAGTTCTGAAGTCTGAAAAGATTTCTTGCTCACAGTAATTCTTTTTACAATTTTTTATATCTTGTAATGTTTACCTTAATTTTCTTATGGTGAACAATCTTTGAAATTTCATTACAGGGTTGTTCCTCTTTAGCTGATTCCTGGAACTATACTTATTAAATCACTTTATTTGTAATTCTGGAATAGAATGTGATTACCGGAAAGGTTCAAGTTAAGAGATGAAGAAAACAATATCCTTGGCCACATAGAAGAACTAGTGAGAAATTTCATAAAGGAAATAGAGCATTAAAGTTTTGCATTCATCCATTGCCTCTTGAAATTACAATTAAAGAATTACCTGTTAGAAAACTTTGAGATCTCGTGTTGATTCATCCTGAGCAAGGAAACTTTGTTTCTTAAATTTAGATTAAGAGCAGCATTCTTCCATAATTTTTTCTGCTTTTCTCCTTTCTTCATGGATGGAGATGTTTCTACAGAACATGCTTAATCAATTTAGGTTTGTTGCTGACAATCAAACTTGAGAAAAACATTCAGTTTGCTTGTCAGAAGAGCTATTTAATGGGTCTGAATGTTTGTACGAGTGAATGAGAGTTTGTAACTGTACCAACCGTTATATGGTTCCTAGCCAATTGAGGCGGTGTATTCTTTACCATTGGTATTTGGAGATACATATGATATATAGAGCAGTACTTGTCCATTAAAACATATGTTTTATAAACCTCATCTCTTCTGAGAAGAAAAATGGGTCGTACACCTCCAACTATAAAGCTGGTGGTTCTGAGTCACAGAGGAAGCAAAGATAGGGCCACAGTAAACTCGTGTATGGGGTGCTTGCCTGAGGGATTACTAGATTAAACAAAAAAATTGTTGTTTGTATTAGCATGATTTGTTGTTATGGAGCTAACATCTCCACTTTTTTAACTGTGCATGTCCTTTATGGAAAATCACTGTTTGCTTTATGTTCTTGTGGATAGCATCTGTCTTCCAAATCCCGTTTTTCCCATTTCTTTTGCTGTGAATTGTATGGATTCCTGATTTTAGTATTATGCAGGCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTATCGTCACTCTTCAGGTTCCATTTTTTGCCATTACACTCAATCAATTGGTCTGAACATTCCTCATAAAAATTGTTTAGCCATACCATGTCTATATCAGATACTCCCAACCTTTTTAGGTACTGTTATGGTCTTCTCTTTATTGCTGTATCTCTTTTCAGCTTCCTCGTGAATATTTTCATGTGAAAAGAATATGTTTAAGTATTTACTGCAAAAATTGTATTATTTGCCTTTGATATTGAATACGAGAAAATAGTCATTCATCTGGATGTCCACATCATTACTGCAGGAATACACACATTTTCCTGTCAAATATGTTGTACATGTAACTTACATTTCATATAAGATGATATTAGTTGTCATATTTGTACCTTATATCTTCTACGAACTAAAATTACTATTTTTCTGTGGAGCCTCATCTTTTACAATCTATTATTTTCTGCCATTTCTTTTTGTTTTTTATTCTCATTACATAATTCATTTAAGTTTTAAGGCGTCCTCTATTTTCTTCAGGAGGGCATAAGGAGGACCATTGAATCCTATCCACATCTGAGAGCTGAACACGGGTCGGGAAAGGATGGTCCTAAATCATCTGCATCTC---TTAAACGGTTTTTCCTCCTGGTAATTACTAATACATATTAATCCATTTGTTGTGAGAGAAAAAATGTGATAGACACCTTACTATTTCATTTCAGAAGTTAATTTAAAACCATGGTCATTACTTATATGGTTATGAATTGAATAGGCATGCCTTTTCTGCTAAACTACATACGTACTCCAAGTATAACTATCATTTGAAATTTCTTACCTTTTCTTTTGGTCCATCCAATCTATTTTACAAAACAACATTGTATGATGATGTCCAAGAATATTTGACCCTTTAAAATAACTTTCATAAGTTTCAAGAATTCAATTTCATATAATAGTGTATATTCAATCAGTAGCAGTGGTACTTTCTCAATCGAAATATTTATTAATCAATCAACTATCTCTCAATCCCAAATTGCTTCAGATCGACTATGATGGTTTGGCCTTGTCCATGGAGATGGAATCCATTACTTGCCATATATCAGAAGGAACATTTTGTATTGTTATTGGATGATTACTAATTACTAATTATGATCAAGTGTAATGATCCAAGGATAAATTGTGAAATGTGAAATCTTTCTAATCATTCCTGCTCCTCTTGGCTAGAAGTAATAGGAGTAGCTATATCTGTATCATGCTGTGAACTCGCATTTTCATCTATTAAATTGTGATATCTTTCATCTGGCTGATGTAATAGGTGATTTTCTTTCTATTAATTCTAAGCGTACTTGGGATCATTTCACCATGGAGTTTT</genome_strand>
        <mrna_strand>GTCCCTTGAGACTAAAGGCCTGCTGACGTGCTGCATTAGACCTAGCAGTATTTTTGGCCCTGGTGATAGGTTGCTACCCCCTTCACTATTCGCAGCTGCAAGGGCTGGAAAATCTAAG.........................................................................................................................................................................................................................................................................................................TTCATTATTGGTGATGGAAATAACCTGTATGATTTCACTTACGTGGAGAATGTGGCACATGCGCATGTGTGTGCAGAACGAGCTCTAGCATCATGAGGAACAGCTGCAGATAAAGCAGCTGGGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATTTCGTCACAAACATGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCATGAAGGTCTTGGCTATGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTATTAATATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTATCACCTTATGGAATGAATGTCCCGCAGCTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTACTAGTTCAAAAGCAAGTGACCGACTAGGATACGCACCTATCGTCACACTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCATATGGAGGACCATTGAATCCTATCCACATCTGATAGCTGAACACTGGCCGGGAAAGGATGGTCCTAAATCATCTGCATCTCTTATTAAACGGATTTTCCTCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTTTCTCTCTATTAATTCTAAGCATACTTGGGATCATTTCACCATGGAGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E342821" ref_strand="+" ref_description="SGN-E342821 [cTOF-7-N17]">
      <seq>tttgttgtagagttgtgcgcacaatctaagtgcttactgcttaccttttgataattaaatttactttaccatttcaaaataatttgttgcttaaaccatattatgtcaataactaggaggggtaagacttgcgcatccattgcactcgggcctatagttgtgcagaaaacattgaaataagagccaccttgtcggttgtccttctctttttctgggaaggaggaactccaccattgtgcgaagtcataattctctcagcaagcattcgaaaaaggaatacctctcttgttttccatttcttttgctagtaaaaaagtatgattttcttctccccactatctcatctctctgtgtttctcatattttaaggggtggggattggggtaaagctagatatcaaaatgattgacatgcactaagcttatgagtatacatgttttcttacatctcctggagtccccgtgaaaaaaagttctgcttgttatgagatttatcaattcttgaacgcggcttttttttttgacaaatctttgatcaataaatgatttttccaggcttatttcatcacaaacacggagtccattaagttttgggagttcgtatcacttattcttgaaggtcttggctatgacaggccaagtattaagattcctgcacctgttatgatgccaattgcacatttggtggaactgacttatnagctgttagcaccttatggaatgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="51119" stop="53507"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51419" g_stop="52052" g_length="634"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="634" r_length="634" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52053" i_stop="53116" i_length="1064">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53117" g_stop="53207" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="725" r_length="91" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E342821" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51419" e_stop="52052"/>
          <exon e_start="53117" e_stop="53207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTTGTAGAGTTGTGCGCACAATCTAAGTGCTTACTGCTTACCTTTTGATAATTAAATTTACTTTACCATTTCAAAATAATTTGTTGCTTAAACCATATTATGTCAATAACTAGGAGGGGTAAGACTTGCGCATCCATTGCACTCGGGCCTATAGTTGTGCAGAAAACATTGAAATAAGAGCCACCTTGTCGGTTGTCCTTCTCTTTTTCTGGGAAGGAGGAACTCCACCATTGTGCGAAGTCATAATTCTCTCAGCAAGCATTCGAAAAAGGAATACCTCTCTTGTTTTCCATTTCTTTTGCTAGTAAAAAAGTATGATTTTCTTCTCCCCACTATCTCATCTCTCTGTGTTTCTCATATTTTAAGGTGTGGGGATTGGGGTAAAGCTAGATATCAAAATGATTGACATGCACTAAGCTTATGAGTATACATGTTTTCTTACATCTCCTGGAGTCCCCGTGAAAAAAAGTTCTGCTTGTTATGAGATTTATCAATTCTTGAACGCGGCTTTTTTTTTTGACAAATCTTTGATCAATAAATGATTTTTCCAGGCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAGGTATTCTCATTTCAAGTTCTGAAGTCTGAAAAGATTTCTTGCTCACAGTAATTCTTTTTACAATTTTTTATATCTTGTAATGTTTACCTTAATTTTCTTATGGTGAACAATCTTTGAAATTTCATTACAGGGTTGTTCCTCTTTAGCTGATTCCTGGAACTATACTTATTAAATCACTTTATTTGTAATTCTGGAATAGAATGTGATTACCGGAAAGGTTCAAGTTAAGAGATGAAGAAAACAATATCCTTGGCCACATAGAAGAACTAGTGAGAAATTTCATAAAGGAAATAGAGCATTAAAGTTTTGCATTCATCCATTGCCTCTTGAAATTACAATTAAAGAATTACCTGTTAGAAAACTTTGAGATCTCGTGTTGATTCATCCTGAGCAAGGAAACTTTGTTTCTTAAATTTAGATTAAGAGCAGCATTCTTCCATAATTTTTTCTGCTTTTCTCCTTTCTTCATGGATGGAGATGTTTCTACAGAACATGCTTAATCAATTTAGGTTTGTTGCTGACAATCAAACTTGAGAAAAACATTCAGTTTGCTTGTCAGAAGAGCTATTTAATGGGTCTGAATGTTTGTACGAGTGAATGAGAGTTTGTAACTGTACCAACCGTTATATGGTTCCTAGCCAATTGAGGCGGTGTATTCTTTACCATTGGTATTTGGAGATACATATGATATATAGAGCAGTACTTGTCCATTAAAACATATGTTTTATAAACCTCATCTCTTCTGAGAAGAAAAATGGGTCGTACACCTCCAACTATAAAGCTGGTGGTTCTGAGTCACAGAGGAAGCAAAGATAGGGCCACAGTAAACTCGTGTATGGGGTGCTTGCCTGAGGGATTACTAGATTAAACAAAAAAATTGTTGTTTGTATTAGCATGATTTGTTGTTATGGAGCTAACATCTCCACTTTTTTAACTGTGCATGTCCTTTATGGAAAATCACTGTTTGCTTTATGTTCTTGTGGATAGCATCTGTCTTCCAAATCCCGTTTTTCCCATTTCTTTTGCTGTGAATTGTATGGATTCCTGATTTTAGTATTATGCAGGCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAG</genome_strand>
        <mrna_strand>TTTGTTGTAGAGTTGTGCGCACAATCTAAGTGCTTACTGCTTACCTTTTGATAATTAAATTTACTTTACCATTTCAAAATAATTTGTTGCTTAAACCATATTATGTCAATAACTAGGAGGGGTAAGACTTGCGCATCCATTGCACTCGGGCCTATAGTTGTGCAGAAAACATTGAAATAAGAGCCACCTTGTCGGTTGTCCTTCTCTTTTTCTGGGAAGGAGGAACTCCACCATTGTGCGAAGTCATAATTCTCTCAGCAAGCATTCGAAAAAGGAATACCTCTCTTGTTTTCCATTTCTTTTGCTAGTAAAAAAGTATGATTTTCTTCTCCCCACTATCTCATCTCTCTGTGTTTCTCATATTTTAAGGGGTGGGGATTGGGGTAAAGCTAGATATCAAAATGATTGACATGCACTAAGCTTATGAGTATACATGTTTTCTTACATCTCCTGGAGTCCCCGTGAAAAAAAGTTCTGCTTGTTATGAGATTTATCAATTCTTGAACGCGGCTTTTTTTTTTGACAAATCTTTGATCAATAAATGATTTTTCCAGGCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATNAGCTGTTAGCACCTTATGGAATGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E211056" ref_strand="+" ref_description="SGN-E211056 [cLEC-69-E18]">
      <seq>taagacttgcgcatccattgcactcgggcctatagttgtgtttaaaacattgaaataagagccaccttgtcggttgtccttctctttttctgggaaggaggaactccaccattgtgcgaagtcataattctctcagcaagcattcgaaaaaggaatacctctcttgttttccatttcttttgctagtaaaaaagtatgattttcttctccccactatctcatctctctgtgtttctcatattttaaggggtggggattggggtaaagctagatatcaaaatgattgacatgcactaagcttatgagtatacatgttttcttacatctcctggagtccccgtgaaaaaaagttctgcttgttatgagatttatcaattcttgaacgcggcttttttttttgacaaatctttgatcaataaatgatttttccaggcttatttcatcacaaacacggagtccattaagttttgggagatcgtatcacttattcttgaaggtcttggctatgacaggccaagtattaagattcctgcacctgttatgatgccaattgcacatttggtggaactgacttataagctgatagcaccttatggaatgaacgtcccacagttgactccttcgagaataagacttctctctatgagcagaacatttagtagttcaaaagcaagtgaccaactaggatacgcacctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="51241" stop="53602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51541" g_stop="52052" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52053" i_stop="53116" i_length="1064">
            <donor d_prob="0.941" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53117" g_stop="53302" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="698" r_length="186" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E211056" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51541" e_stop="52052"/>
          <exon e_start="53117" e_stop="53302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGACTTGCGCATCCATTGCACTCGGGCCTATAGTTGTGCAGAAAACATTGAAATAAGAGCCACCTTGTCGGTTGTCCTTCTCTTTTTCTGGGAAGGAGGAACTCCACCATTGTGCGAAGTCATAATTCTCTCAGCAAGCATTCGAAAAAGGAATACCTCTCTTGTTTTCCATTTCTTTTGCTAGTAAAAAAGTATGATTTTCTTCTCCCCACTATCTCATCTCTCTGTGTTTCTCATATTTTAAGGTGTGGGGATTGGGGTAAAGCTAGATATCAAAATGATTGACATGCACTAAGCTTATGAGTATACATGTTTTCTTACATCTCCTGGAGTCCCCGTGAAAAAAAGTTCTGCTTGTTATGAGATTTATCAATTCTTGAACGCGGCTTTTTTTTTTGACAAATCTTTGATCAATAAATGATTTTTCCAGGCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAGGTATTCTCATTTCAAGTTCTGAAGTCTGAAAAGATTTCTTGCTCACAGTAATTCTTTTTACAATTTTTTATATCTTGTAATGTTTACCTTAATTTTCTTATGGTGAACAATCTTTGAAATTTCATTACAGGGTTGTTCCTCTTTAGCTGATTCCTGGAACTATACTTATTAAATCACTTTATTTGTAATTCTGGAATAGAATGTGATTACCGGAAAGGTTCAAGTTAAGAGATGAAGAAAACAATATCCTTGGCCACATAGAAGAACTAGTGAGAAATTTCATAAAGGAAATAGAGCATTAAAGTTTTGCATTCATCCATTGCCTCTTGAAATTACAATTAAAGAATTACCTGTTAGAAAACTTTGAGATCTCGTGTTGATTCATCCTGAGCAAGGAAACTTTGTTTCTTAAATTTAGATTAAGAGCAGCATTCTTCCATAATTTTTTCTGCTTTTCTCCTTTCTTCATGGATGGAGATGTTTCTACAGAACATGCTTAATCAATTTAGGTTTGTTGCTGACAATCAAACTTGAGAAAAACATTCAGTTTGCTTGTCAGAAGAGCTATTTAATGGGTCTGAATGTTTGTACGAGTGAATGAGAGTTTGTAACTGTACCAACCGTTATATGGTTCCTAGCCAATTGAGGCGGTGTATTCTTTACCATTGGTATTTGGAGATACATATGATATATAGAGCAGTACTTGTCCATTAAAACATATGTTTTATAAACCTCATCTCTTCTGAGAAGAAAAATGGGTCGTACACCTCCAACTATAAAGCTGGTGGTTCTGAGTCACAGAGGAAGCAAAGATAGGGCCACAGTAAACTCGTGTATGGGGTGCTTGCCTGAGGGATTACTAGATTAAACAAAAAAATTGTTGTTTGTATTAGCATGATTTGTTGTTATGGAGCTAACATCTCCACTTTTTTAACTGTGCATGTCCTTTATGGAAAATCACTGTTTGCTTTATGTTCTTGTGGATAGCATCTGTCTTCCAAATCCCGTTTTTCCCATTTCTTTTGCTGTGAATTGTATGGATTCCTGATTTTAGTATTATGCAGGCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTAT</genome_strand>
        <mrna_strand>TAAGACTTGCGCATCCATTGCACTCGGGCCTATAGTTGTGTTTAAAACATTGAAATAAGAGCCACCTTGTCGGTTGTCCTTCTCTTTTTCTGGGAAGGAGGAACTCCACCATTGTGCGAAGTCATAATTCTCTCAGCAAGCATTCGAAAAAGGAATACCTCTCTTGTTTTCCATTTCTTTTGCTAGTAAAAAAGTATGATTTTCTTCTCCCCACTATCTCATCTCTCTGTGTTTCTCATATTTTAAGGGGTGGGGATTGGGGTAAAGCTAGATATCAAAATGATTGACATGCACTAAGCTTATGAGTATACATGTTTTCTTACATCTCCTGGAGTCCCCGTGAAAAAAAGTTCTGCTTGTTATGAGATTTATCAATTCTTGAACGCGGCTTTTTTTTTTGACAAATCTTTGATCAATAAATGATTTTTCCAGGCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGATCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGATAGCACCTTATGGAATGAACGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E696371" ref_strand="+" ref_description="SGN-E696371 [LH_Ea08P09](-)">
      <seq>ggagttcgtatcacttattcttgaaggtcttggctatgacaggccaagtattaagattcctgcacctgttatgatgccaattgcacatttggtggaactgacttataagctgttagcaccttatggaatgaaggtcccgcagttgactccttcgagaataagacttctctctatgagcagaacatttagtagttcaaaagcaagtgaccgactaggatacgcacctatcgtcacacttcaggagggcataaggaggaccattgaatcctatccacatctgagagctgaacacgggccgggaaaggatggtcctaaatcatctgcatctctttttaaacggtttttcctcctggtgattttctctctattaattctaagcatacttgggatcatttcaccatggagtttttttcgtcataggaatcttagttgcctttgttgtgttcttgatatttgacaaaagcaagaagaattagatcatttagttcatggtctagcattgatgggagaacatccaactctaataaaaaaaacaacgatggggcgtgcagcgtcattcactcattggagcctcacttgagagaagttgtgtttacatcctggagttactatatagtaaggtgctttttaccaagccagttattttagtttttgttgtattaccaaatattgtttattttggtacattggtaaagagtactaactaaaagtttgataagctacataagctatctatggcttatttcatttcaaaagttgtctttttatttcttaaaacttgaggagttcctcatcgatggcaaatgtagtagacatatgtgcatcgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="51711" stop="55519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52011" g_stop="52052" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52053" i_stop="53116" i_length="1064">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53117" g_stop="53315" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="241" r_length="199" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53316" i_stop="53811" i_length="496">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53812" g_stop="53919" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="352" r_length="111" r_score="0.935"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53920" i_stop="54583" i_length="664">
            <donor d_prob="0.939" d_score="0.87"/>
            <acceptor a_prob="0.678" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54584" g_stop="54650" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="420" r_length="68" r_score="0.940"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54651" i_stop="54837" i_length="187">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.940" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54838" g_stop="55218" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="795" r_length="375" r_score="0.853"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="828" polyA_stop="844"/>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E696371" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E696371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52011" e_stop="52052"/>
          <exon e_start="53117" e_stop="53315"/>
          <exon e_start="53812" e_stop="53919"/>
          <exon e_start="54584" e_stop="54650"/>
          <exon e_start="54838" e_stop="55218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAGGTATTCTCATTTCAAGTTCTGAAGTCTGAAAAGATTTCTTGCTCACAGTAATTCTTTTTACAATTTTTTATATCTTGTAATGTTTACCTTAATTTTCTTATGGTGAACAATCTTTGAAATTTCATTACAGGGTTGTTCCTCTTTAGCTGATTCCTGGAACTATACTTATTAAATCACTTTATTTGTAATTCTGGAATAGAATGTGATTACCGGAAAGGTTCAAGTTAAGAGATGAAGAAAACAATATCCTTGGCCACATAGAAGAACTAGTGAGAAATTTCATAAAGGAAATAGAGCATTAAAGTTTTGCATTCATCCATTGCCTCTTGAAATTACAATTAAAGAATTACCTGTTAGAAAACTTTGAGATCTCGTGTTGATTCATCCTGAGCAAGGAAACTTTGTTTCTTAAATTTAGATTAAGAGCAGCATTCTTCCATAATTTTTTCTGCTTTTCTCCTTTCTTCATGGATGGAGATGTTTCTACAGAACATGCTTAATCAATTTAGGTTTGTTGCTGACAATCAAACTTGAGAAAAACATTCAGTTTGCTTGTCAGAAGAGCTATTTAATGGGTCTGAATGTTTGTACGAGTGAATGAGAGTTTGTAACTGTACCAACCGTTATATGGTTCCTAGCCAATTGAGGCGGTGTATTCTTTACCATTGGTATTTGGAGATACATATGATATATAGAGCAGTACTTGTCCATTAAAACATATGTTTTATAAACCTCATCTCTTCTGAGAAGAAAAATGGGTCGTACACCTCCAACTATAAAGCTGGTGGTTCTGAGTCACAGAGGAAGCAAAGATAGGGCCACAGTAAACTCGTGTATGGGGTGCTTGCCTGAGGGATTACTAGATTAAACAAAAAAATTGTTGTTTGTATTAGCATGATTTGTTGTTATGGAGCTAACATCTCCACTTTTTTAACTGTGCATGTCCTTTATGGAAAATCACTGTTTGCTTTATGTTCTTGTGGATAGCATCTGTCTTCCAAATCCCGTTTTTCCCATTTCTTTTGCTGTGAATTGTATGGATTCCTGATTTTAGTATTATGCAGGCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTATCGTCACTCTTCAGGTTCCATTTTTTGCCATTACACTCAATCAATTGGTCTGAACATTCCTCATAAAAATTGTTTAGCCATACCATGTCTATATCAGATACTCCCAACCTTTTTAGGTACTGTTATGGTCTTCTCTTTATTGCTGTATCTCTTTTCAGCTTCCTCGTGAATATTTTCATGTGAAAAGAATATGTTTAAGTATTTACTGCAAAAATTGTATTATTTGCCTTTGATATTGAATACGAGAAAATAGTCATTCATCTGGATGTCCACATCATTACTGCAGGAATACACACATTTTCCTGTCAAATATGTTGTACATGTAACTTACATTTCATATAAGATGATATTAGTTGTCATATTTGTACCTTATATCTTCTACGAACTAAAATTACTATTTTTCTGTGGAGCCTCATCTTTTACAATCTATTATTTTCTGCCATTTCTTTTTGTTTTTTATTCTCATTACATAATTCATTTAAGTTTTAAGGCGTCCTCTATTTTCTTCAGGAGGGCATAAGGAGGACCATTGAATCCTATCCACATCTGAGAGCTGAACACGGGTCGGGAAAGGATGGTCCTAAATCATCTGCATCTC---TTAAACGGTTTTTCCTCCTGGTAATTACTAATACATATTAATCCATTTGTTGTGAGAGAAAAAATGTGATAGACACCTTACTATTTCATTTCAGAAGTTAATTTAAAACCATGGTCATTACTTATATGGTTATGAATTGAATAGGCATGCCTTTTCTGCTAAACTACATACGTACTCCAAGTATAACTATCATTTGAAATTTCTTACCTTTTCTTTTGGTCCATCCAATCTATTTTACAAAACAACATTGTATGATGATGTCCAAGAATATTTGACCCTTTAAAATAACTTTCATAAGTTTCAAGAATTCAATTTCATATAATAGTGTATATTCAATCAGTAGCAGTGGTACTTTCTCAATCGAAATATTTATTAATCAATCAACTATCTCTCAATCCCAAATTGCTTCAGATCGACTATGATGGTTTGGCCTTGTCCATGGAGATGGAATCCATTACTTGCCATATATCAGAAGGAACATTTTGTATTGTTATTGGATGATTACTAATTACTAATTATGATCAAGTGTAATGATCCAAGGATAAATTGTGAAATGTGAAATCTTTCTAATCATTCCTGCTCCTCTTGGCTAGAAGTAATAGGAGTAGCTATATCTGTATCATGCTGTGAACTCGCATTTTCATCTATTAAATTGTGATATCTTTCATCTGGCTGATGTAATAGGTGATTTTCTTTCTATTAATTCTAAGCGTACTTGGGATCATTTCACCATGGAG-TTTTTTCGTCATAGGTATGCACTCTTCTCTATCTCCTCCTGTCCATATCATTTACGCTTGCTTGTAACTTGGTCAAACACTCTATTGTGCCCAGAAGAGTTTTTTCTGTTTCTCTTCATAGCAGATGTAAATAACACTCCAAACAATGTAAGCTGGTATCCCATCTTCAGTGCTCTGACCTTCTCATGTTTACTGCTGCAGGAATCTTAGCTGCCTTTGTTGTGTTCTTGATATTTGACAAAAGCAAGAAGAATTAGATCATTTAGTTCATGCAGTATTTGGTCTAGCATTGATGGGAGAACATCCAACTCTTAATTAAAAAAAACAACGATGGGGCGTGCAGCATCATTCACTCATTGGAGCCTCACTTGAGAGAAGTTGTGTTTACATCCTGGAGTTGCTATATAGTAAGGTGCTTTTTACCAAGCCAGTTATTTTAGTTTTTGTTG---T-----AT-TTGTTTATTTTGGTACATTGGTAAAGAGTACTAACTAAAAGTTTTTAAAACCTTTGATAAGCTACATAAGCTATCTATCGTAAGTTTCAAAAGTTTTCTTT--ATTTCTTAAACCTTGAGGAGTTCCTCATC</genome_strand>
        <mrna_strand>GGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCGCAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCGACTAGGATACGCACCTATCGTCACACTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGGCATAAGGAGGACCATTGAATCCTATCCACATCTGAGAGCTGAACACGGGCCGGGAAAGGATGGTCCTAAATCATCTGCATCTCTTTTTAAACGGTTTTTCCTCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTTTCTCTCTATTAATTCTAAGCATACTTGGGATCATTTCACCATGGAGTTTTTTTCGTCATAG...........................................................................................................................................................................................GAATCTTAGTTGCCTTTGTTGTGTTCTTGATATTTGACAAAAGCAAGAAGAATTAGATCATTTAG-T--T-C---A--TGGTCTAGCATTGATGGGAGAACATCCAACTC-TAA-TAAAAAAAACAACGATGGGGCGTGCAGCGTCATTCACTCATTGGAGCCTCACTTGAGAGAAGTTGTGTTTACATCCTGGAGTTACTATATAGTAAGGTGCTTTTTACCAAGCCAGTTATTTTAGTTTTTGTTGTATTACCAAATATTGTTTATTTTGGTACATTGGTAAAGAGTACTAACTAAAAG-TTTGATAAGC-TACATAAGCTATCTATG-GCT-TAT-TTCA-TTTCAAAAGTTGTCTTTTTATTTCTTAAAACTTGAGGAGTTCCTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E550125" ref_strand="+" ref_description="SGN-E550125 [TUS-5-F35](-)">
      <seq>gaagaatacgaggccaaaaacttgttgagattttcagtagctggtgataagcaagtaaacatatttcaggattgtggattatctgctgcttccaccttggtttcttctcttccttcatcaatcagaagtgagatggccatgaaacttggagaaaagagaattctggatgactctggtagagttagacaacaaatagtgattggttcaaaagaacaggctgctgagtgcatgcagaggctagttagacgaaaggttatgttttctagcacaaggcaggctgttgcaggtttattgactgctggtgctgttcatggagtcagatatgtagcaaacaagatgcgcaaggcttggaaatcttgggtgtaattgtttcctgtttttgggtgacatcacgtcttttaactggttcagacatggggatatagccacaaccacagttacacctaatgacatgcggttcaacgatggagttcttagcatggatagagtttgccgactctcctgctgctttttcaaaataagacaaatagaatttgaggggggaaataaccaacaacccatcaaaaaatttcttctgaaagttttctgttcacttgtattcttttcttttatttatttcaaaggtgggaagagtacttcagggaaggtcgagctgttgtatggtagaacatcctgggaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="59128" stop="61378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59428" g_stop="59496" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59497" i_stop="60145" i_length="649">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60146" g_stop="60251" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="175" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60252" i_stop="60567" i_length="316">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.843" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60568" g_stop="61078" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="684" r_length="509" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E550125" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59428" e_stop="59496"/>
          <exon e_start="60146" e_stop="60251"/>
          <exon e_start="60568" e_stop="61078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAATACGAGGCCAAAAACTTGTTGAGATTTTCAGTAGCTGGTGATAAGCAAGTAAACATATTTCAGGTCTCTCTCTTTTCTAAAGCTTTGTCTCGTGTTGCTTCCTTAACATGGTTAATTGTCCTGAATGATGCTAATAATTCTTTATTATAATCAATGCTTCTAATACGGGAACATATTTATATCGACGATAAAACACGTTTTTCTATTGAAGCATAAAAAAAAAAGTATGGTGTGAATGGGTGATCAAGAATATACAGCATGAGACATGCTAATGGGGCCCTTCTATTGTTGCCTGTTGTGTACATTTTTAGTGGTAATTTTTGACCTTGAATGGTAGCCTCTGTGGTCAGTGAAATTTATCTTTCTATTCTGAACATTTCTCAAATAGCTTTGAAGTCATTTGCTTTCACGACTTGTCAAGTAGAGTTTTGGGCATCACAAGTTCCCTTGCATGAAAATTAGTTAGTACTTTTACATGATTACAATTTGTACACACTCTGTTCATTGAGTCAATCTCGATCTTTGATTGCTTTCTTAAAATTTTCATATTACTTCTGGTAATACATCTATATGAGATTCTTTGACTACACAAGCACATCTTTTCTTTCTGATTGATCCAAGGAGATTGATATTGATTACACCTCTGTTGAGATATGTAAATAGGAAAATCAAGGTCAAGTCAATTGACATCTTTTAGTGTTATCCAAATCAGGATTGTGGATTATCTGCTGCTTCCACCTTGGTTTCTTCTCTTCCTTCATCAATCAGAAGTGAGATGGCCATGAAACTTGGAGAAAAGAGAATTCTGGATGACTCTGGTACGTAAATCAACTGCAAAAAGAGTGAATTTTCTGGAAAGAATCTTAAAATTTCCTGTTCTTTCAGATTTTTTCCCTTGTTAGTAGTTCCTGTTGAATTGTGTCTAACTTCCTCATTAGTGAACATACACTTATATTTTAGTTATTTCACGTCTGTAACTCTTACGCTTAGATCCTGATACCATGTTGGATTGTGTGCTTGTCTCATCTCTAGAGAAAAGTTCTATTTAGTTATATTACTTGTTATGATAAGCTCTTCTAATGTTCCCTCCTCAGCTTAATCAAATCATTTCACCTATGCCATATTTTCTTGTAGGTAGAGTTAGACAACAAATAGTGATTGGTTCAAAAGAACAGGCTGCTGAGTGCATGCAGAGGCTAGTTAGACGAAAGGTTATGTTTTCTAGCACAAGGCAGGCTGTTGCAGGTTTATTGACTGCTGGTGCTGTTCATGGAGTCAGATATGTAGCAAACAAGATGCGCAAGGCTTGGAAATCTTGGGTGTAATTGTTTCCTGTTTTTGGGTGACATCACGTCTTTTAACTGGTTCAGACATGGGGATATAGCCACAACCACAGTTACACCTAATGACATGCGGTTCAACCATGGAGTTCTTAGCATGGATAGAGTTTGCCGACTCTCCTGCTGCTTTTTCAAAATAAGACAAATAGAATTTGAGGGGGGAAATAACCAACAACCCATCAAAAAATTTCTTCTGAAAGTTTTCTGTTCACTTGTATTCTTTTCTTTTATTTATTTCAAAGGTGGGAAGAGTTCTTCAGGGAAGGTCGAGCTGTTGTATGTTTAGAACATCCTGGTGAAAAGAA</genome_strand>
        <mrna_strand>GAAGAATACGAGGCCAAAAACTTGTTGAGATTTTCAGTAGCTGGTGATAAGCAAGTAAACATATTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTGGATTATCTGCTGCTTCCACCTTGGTTTCTTCTCTTCCTTCATCAATCAGAAGTGAGATGGCCATGAAACTTGGAGAAAAGAGAATTCTGGATGACTCTG............................................................................................................................................................................................................................................................................................................................GTAGAGTTAGACAACAAATAGTGATTGGTTCAAAAGAACAGGCTGCTGAGTGCATGCAGAGGCTAGTTAGACGAAAGGTTATGTTTTCTAGCACAAGGCAGGCTGTTGCAGGTTTATTGACTGCTGGTGCTGTTCATGGAGTCAGATATGTAGCAAACAAGATGCGCAAGGCTTGGAAATCTTGGGTGTAATTGTTTCCTGTTTTTGGGTGACATCACGTCTTTTAACTGGTTCAGACATGGGGATATAGCCACAACCACAGTTACACCTAATGACATGCGGTTCAACGATGGAGTTCTTAGCATGGATAGAGTTTGCCGACTCTCCTGCTGCTTTTTCAAAATAAGACAAATAGAATTTGAGGGGGGAAATAACCAACAACCCATCAAAAAATTTCTTCTGAAAGTTTTCTGTTCACTTGTATTCTTTTCTTTTATTTATTTCAAAGGTGGGAAGAGTACTTCAGGGAAGGTCGAGCTGTTGTATG-GTAGAACATCCTGG-GAAAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E377514" ref_strand="+" ref_description="SGN-E377514 [TUS-20-P3](-)">
      <seq>acgaggccaaaaacttgttgagattttcagtagctggtgataagcaagtaaacatatttcaggattgtggattatctgctgcttccaccttggtttcttctcttccttcatcaatcagaagtgagatggccatgaaacttggagaaaagagaattctggatgactctggtagagttagacaacaaatagtgattggttcaaaagaacaggctgctgagtgcatgcagaggctagttagacgaaaggttatgttttctagcacaaggcaggctgttgcaggtttattgactgctggtgctgttcatggagtcagatatgtagcaaacaagatgcgcaaggcttggaaatcttgggtgtaattgtttcctgtttttgggtgacatcacgtcttttaactggttcagacatggggatatagccacaaccacagttacacctaatgacatgcggttcaacgatggagttcttagcatggatagagtttgccgactctcctgctgctttttcaaaataagacaaatagaatttgaggggggaaataaccaacaacccatcaaaaaatttcttctgaaagttttctgttcacttgtattcttttcttttatttatttcaaaggtgggaagagttcttcagggaaggtcgagctgttgtatgtttagaacatcctggtgaaaagaagttaatcaatgtttctaaacaaggaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0075D08-XIan2/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0075D08.1" temp_strand="+" temp_description="C02HBa0075D08.1  AC215379.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0075D08 sequenced_by:kribb upload_account_name:korea">
        <position start="59135" stop="61404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59435" g_stop="59496" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59497" i_stop="60145" i_length="649">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60146" g_stop="60251" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="168" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60252" i_stop="60567" i_length="316">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.843" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60568" g_stop="61111" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="712" r_length="544" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0075D08.1" gen_strand="+" ref_id="SGN-E377514" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0075D08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59435" e_stop="59496"/>
          <exon e_start="60146" e_stop="60251"/>
          <exon e_start="60568" e_stop="61111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGGCCAAAAACTTGTTGAGATTTTCAGTAGCTGGTGATAAGCAAGTAAACATATTTCAGGTCTCTCTCTTTTCTAAAGCTTTGTCTCGTGTTGCTTCCTTAACATGGTTAATTGTCCTGAATGATGCTAATAATTCTTTATTATAATCAATGCTTCTAATACGGGAACATATTTATATCGACGATAAAACACGTTTTTCTATTGAAGCATAAAAAAAAAAGTATGGTGTGAATGGGTGATCAAGAATATACAGCATGAGACATGCTAATGGGGCCCTTCTATTGTTGCCTGTTGTGTACATTTTTAGTGGTAATTTTTGACCTTGAATGGTAGCCTCTGTGGTCAGTGAAATTTATCTTTCTATTCTGAACATTTCTCAAATAGCTTTGAAGTCATTTGCTTTCACGACTTGTCAAGTAGAGTTTTGGGCATCACAAGTTCCCTTGCATGAAAATTAGTTAGTACTTTTACATGATTACAATTTGTACACACTCTGTTCATTGAGTCAATCTCGATCTTTGATTGCTTTCTTAAAATTTTCATATTACTTCTGGTAATACATCTATATGAGATTCTTTGACTACACAAGCACATCTTTTCTTTCTGATTGATCCAAGGAGATTGATATTGATTACACCTCTGTTGAGATATGTAAATAGGAAAATCAAGGTCAAGTCAATTGACATCTTTTAGTGTTATCCAAATCAGGATTGTGGATTATCTGCTGCTTCCACCTTGGTTTCTTCTCTTCCTTCATCAATCAGAAGTGAGATGGCCATGAAACTTGGAGAAAAGAGAATTCTGGATGACTCTGGTACGTAAATCAACTGCAAAAAGAGTGAATTTTCTGGAAAGAATCTTAAAATTTCCTGTTCTTTCAGATTTTTTCCCTTGTTAGTAGTTCCTGTTGAATTGTGTCTAACTTCCTCATTAGTGAACATACACTTATATTTTAGTTATTTCACGTCTGTAACTCTTACGCTTAGATCCTGATACCATGTTGGATTGTGTGCTTGTCTCATCTCTAGAGAAAAGTTCTATTTAGTTATATTACTTGTTATGATAAGCTCTTCTAATGTTCCCTCCTCAGCTTAATCAAATCATTTCACCTATGCCATATTTTCTTGTAGGTAGAGTTAGACAACAAATAGTGATTGGTTCAAAAGAACAGGCTGCTGAGTGCATGCAGAGGCTAGTTAGACGAAAGGTTATGTTTTCTAGCACAAGGCAGGCTGTTGCAGGTTTATTGACTGCTGGTGCTGTTCATGGAGTCAGATATGTAGCAAACAAGATGCGCAAGGCTTGGAAATCTTGGGTGTAATTGTTTCCTGTTTTTGGGTGACATCACGTCTTTTAACTGGTTCAGACATGGGGATATAGCCACAACCACAGTTACACCTAATGACATGCGGTTCAACCATGGAGTTCTTAGCATGGATAGAGTTTGCCGACTCTCCTGCTGCTTTTTCAAAATAAGACAAATAGAATTTGAGGGGGGAAATAACCAACAACCCATCAAAAAATTTCTTCTGAAAGTTTTCTGTTCACTTGTATTCTTTTCTTTTATTTATTTCAAAGGTGGGAAGAGTTCTTCAGGGAAGGTCGAGCTGTTGTATGTTTAGAACATCCTGGTGAAAAGAAGTTAATCAATGTTTCTAAACAAGGAATTGCTAT</genome_strand>
        <mrna_strand>ACGAGGCCAAAAACTTGTTGAGATTTTCAGTAGCTGGTGATAAGCAAGTAAACATATTTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTGGATTATCTGCTGCTTCCACCTTGGTTTCTTCTCTTCCTTCATCAATCAGAAGTGAGATGGCCATGAAACTTGGAGAAAAGAGAATTCTGGATGACTCTG............................................................................................................................................................................................................................................................................................................................GTAGAGTTAGACAACAAATAGTGATTGGTTCAAAAGAACAGGCTGCTGAGTGCATGCAGAGGCTAGTTAGACGAAAGGTTATGTTTTCTAGCACAAGGCAGGCTGTTGCAGGTTTATTGACTGCTGGTGCTGTTCATGGAGTCAGATATGTAGCAAACAAGATGCGCAAGGCTTGGAAATCTTGGGTGTAATTGTTTCCTGTTTTTGGGTGACATCACGTCTTTTAACTGGTTCAGACATGGGGATATAGCCACAACCACAGTTACACCTAATGACATGCGGTTCAACGATGGAGTTCTTAGCATGGATAGAGTTTGCCGACTCTCCTGCTGCTTTTTCAAAATAAGACAAATAGAATTTGAGGGGGGAAATAACCAACAACCCATCAAAAAATTTCTTCTGAAAGTTTTCTGTTCACTTGTATTCTTTTCTTTTATTTATTTCAAAGGTGGGAAGAGTTCTTCAGGGAAGGTCGAGCTGTTGTATGTTTAGAACATCCTGGTGAAAAGAAGTTAATCAATGTTTCTAAACAAGGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>86</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1438" PGL_stop="5797"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1438" e_stop="1495"/>
            <exon e_start="1574" e_stop="1905"/>
            <exon e_start="2021" e_stop="2411"/>
            <exon e_start="2492" e_stop="2592"/>
            <exon e_start="2726" e_stop="2775"/>
            <exon e_start="3584" e_stop="3770"/>
            <exon e_start="4509" e_stop="4653"/>
            <exon e_start="4980" e_stop="5110"/>
            <exon e_start="5417" e_stop="5686"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.829" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.968" e_score="0.997"/>
          <exon-intron don_prob="0.896" acc_prob="0.767" e_score="0.992"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1438" e_stop="1495" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.829" acc_prob="0.999">
            <gDNA_intron_boundary i_start="1496" i_stop="1573" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="1574" e_stop="1905" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.968">
            <gDNA_intron_boundary i_start="1906" i_stop="2020" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="2021" e_stop="2411" e_length="391"/>
          </exon>
          <intron i_serial="3" don_prob="0.896" acc_prob="0.767">
            <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2492" e_stop="2592" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="2726" e_stop="2775" e_length="50"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="3584" e_stop="3770" e_length="187"/>
          </exon>
          <intron i_serial="6" don_prob="0.956" acc_prob="0.972">
            <gDNA_intron_boundary i_start="3771" i_stop="4508" i_length="738"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="4509" e_stop="4653" e_length="145"/>
          </exon>
          <intron i_serial="7" don_prob="0.987" acc_prob="0.945">
            <gDNA_intron_boundary i_start="4654" i_stop="4979" i_length="326"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="4980" e_stop="5110" e_length="131"/>
          </exon>
          <intron i_serial="8" don_prob="0.992" acc_prob="0.000">
            <gDNA_intron_boundary i_start="5111" i_stop="5416" i_length="306"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="5417" e_stop="5686" e_length="270"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1438" stop="1495"/>
              <exon start="1574" stop="1905"/>
              <exon start="2021" stop="2373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2146" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550717" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2146" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2147" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2277" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3770"/>
              <exon start="4509" stop="4631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2518" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3770"/>
              <exon start="4509" stop="4653"/>
              <exon start="4980" stop="5008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4513" stop="4653"/>
              <exon start="4980" stop="5110"/>
              <exon start="5417" stop="5686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350922" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAACGGACACCTACTCTTTCTTGGAAGCTGATATCCTTGGGGTAACTACTATATCTG : GGCAGAGTAGAAGATTCCAACCCAAGCCCAAGTTACAAGTATACAGAGAGAGATATGATACAATCATTCCTGATTTAGATGTAGGAGAGTCTGTGCCATGTCTGCCAGATTCACAATCCGTTCATTCTGAAATGGATTTTGTGAATTCTGAGAAGGGACATGGATTACCTGCTGCTGATGTCCTTGATTTCTCAGTCAGAGGATTTGATATTATTACAGAATCTGCACATGATTTCCCAGTTCATGAAGACTATGTTGTGGAGGCTTCTCTTCCAGATGCTGACATCCCAGAAAATCACTCTGAGGCTACTTCTCAAATGCCTGAGGAATCT : GTACCACAGAGGCCCAAGAATAAAAAACAAAAATTCCCTGCATCTGAACTTTCTGCAATTAGTGAAGAGAACGGAGAGAGTAGATTATTAAGGAGTAGAAGAAAGTCCGTGAATGCATCTAGACTAGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG : TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG : AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG : TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAG : GCTGTGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGTTCTAACAAATCGTTCGAAAG : ATCATTCCCACTTCGAACGAGTAATCGAGCATTTAAAGCAAATTGAAGCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAAATGGTGGGGAATCAGGAGATCTGT : GAAGAAGCGAAGTCTGAACATGTTGAGGAAAAAGAAGTTGAAACAGTGGAGCAAGATGTTCCGAATCCAGTTAAGGAGTATGATGATGATGAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGAATGATGTTAAGTTTCAGTTAATCTATATTCTCCTGCCACAAGGGATCTTTACATCTCTTTTGTTAAATTCCTTTTTGAACTCGGGCCAACAATATGGTGTACTTGAGATAATCATTTCAACGGAATATAGCAAAA</gDNA_template>
            <first_frame> E  T  D  T  Y  S  F  L  E  A  D  I  L  G  V  T  T  I  S   : G  Q  S  R  R  F  Q  P  K  P  K  L  Q  V  Y  R  E  R  Y  D  T  I  I  P  D  L  D  V  G  E  S  V  P  C  L  P  D  S  Q  S  V  H  S  E  M  D  F  V  N  S  E  K  G  H  G  L  P  A  A  D  V  L  D  F  S  V  R  G  F  D  I  I  T  E  S  A  H  D  F  P  V  H  E  D  Y  V  V  E  A  S  L  P  D  A  D  I  P  E  N  H  S  E  A  T  S  Q  M  P  E  E  S  :  V  P  Q  R  P  K  N  K  K  Q  K  F  P  A  S  E  L  S  A  I  S  E  E  N  G  E  S  R  L  L  R  S  R  R  K  S  V  N  A  S  R  L  V  D  E  S  D  E  D  V  I  G  D  G  E  Y  V  P  E  H  P  N  D  S  V  T  I  G  N  D  E  E  F  L  V  E  N  D  S  Q  G  K  K  V  Q  K  K  S  K  K  T  V  T  K  E  G  K  R  V  R  K  S  K  K  T  A  E  A  S  D  Q  A  A  N  K  K  P  K  K  F  S  H  S  T  R  Q  K  R  R  T   : V  D  K  A  L  L  E  A  P  M  D  E  I  D  Y  S  K  V  P  I  K  D  L  I  L  L  A  E  H  R  E  R  L  A  :  K  K  D  A  A  V  S  Q  M  P  P  T  T  T  D  Q  S :   A  G  A  S  V  S  N  Y  D  E  D  E  T  Y  A  S  D  E  D  G  E  A  D  D  H  N  K  S  T  M  G  E  D  T  S  S  Y  F  N  Y  Q  T  Y  M  D  K  T  P  S  T  R  W  S  K  Q  D  T  E  L  F  Y  E  :  A  V  Q  Q  F  G  T  D  L  S  L  I  Q  Q  L  F  P  G  R  T  R  R  Q  L  K  L  K  Y  K  K  E  E  R  Q  N  P  F  R  L  H  D  V  L  T  N  R  S  K   : D  H  S  H  F  E  R  V  I  E  H  L  K  Q  I  E  A  E  E  L  Q  Y  A  D  K  D  E  S  I  D  L  T  G  E  E  E  M  V  G  N  Q  E  I  C  :  E  E  A  K  S  E  H  V  E  E  K  E  V  E  T  V  E  Q  D  V  P  N  P  V  K  E  Y  D  D  D  E  D  D  F  M  K  W  S  Q  Y  T  S  E  V  *  M  M  L  S  F  S  *  S  I  F  S  C  H  K  G  S  L  H  L  F  C  *  I  P  F  *  T  R  A  N  N  M  V  Y  L  R  *  S  F  Q  R  N  I  A  K </first_frame>
            <second_frame>  K  R  T  P  T  L  S  W  K  L  I  S  L  G  *  L  L  Y  L  :  G  R  V  E  D  S  N  P  S  P  S  Y  K  Y  T  E  R  D  M  I  Q  S  F  L  I  *  M  *  E  S  L  C  H  V  C  Q  I  H  N  P  F  I  L  K  W  I  L  *  I  L  R  R  D  M  D  Y  L  L  L  M  S  L  I  S  Q  S  E  D  L  I  L  L  Q  N  L  H  M  I  S  Q  F  M  K  T  M  L  W  R  L  L  F  Q  M  L  T  S  Q  K  I  T  L  R  L  L  L  K  C  L  R  N  L :   Y  H  R  G  P  R  I  K  N  K  N  S  L  H  L  N  F  L  Q  L  V  K  R  T  E  R  V  D  Y  *  G  V  E  E  S  P  *  M  H  L  D  *  *  M  S  L  M  K  T  *  L  V  M  G  N  M  C  L  N  I  L  M  I  L  L  Q  L  G  M  M  R  S  F  W  W  K  M  T  H  K  G  K  R  Y  R  R  S  P  R  K  Q  L  L  R  K  E  N  E  L  G  R  V  K  R  L  L  K  L  L  I  R  Q  P  T  R  S  L  R  S  F  L  I  P  L  V  K  R  G  E  Q  :  W  I  R  L  C  L  R  L  P  W  M  R  L  T  I  Q  R  C  L  L  R  I  *  F  Y  *  L  S  T  E  S  G  W  R :   K  K  M  Q  Q  C  H  R  C  L  L  L  L  Q  I  R   : V  L  V  H  L  F  L  I  M  M  R  M  R  P  M  L  Q  M  K  M  G  K  L  M  I  I  I  K  V  L  W  V  K  I  L  L  P  T  S  I  I  R  L  T  W  T  R  P  P  A  Q  G  G  Q  N  R  T  Q  N  F  S  M  R :   L  C  S  S  L  G  Q  I  Y  P  L  Y  N  N  F  F  L  A  G  H  V  D  S  *  S  *  N  T  R  K  K  S  G  K  I  H  L  G  F  M  M  F  *  Q  I  V  R  K  :  I  I  P  T  S  N  E  *  S  S  I  *  S  K  L  K  L  R  N  C  S  T  L  I  K  T  S  Q  L  T  *  L  G  R  R  K  W  W  G  I  R  R  S  V :   K  K  R  S  L  N  M  L  R  K  K  K  L  K  Q  W  S  K  M  F  R  I  Q  L  R  S  M  M  M  M  K  M  I  S  *  N  G  V  S  I  R  V  K  C  E  *  C  *  V  S  V  N  L  Y  S  P  A  T  R  D  L  Y  I  S  F  V  K  F  L  F  E  L  G  P  T  I  W  C  T  *  D  N  H  F  N  G  I  *  Q   </second_frame>
            <third_frame>   N  G  H  L  L  F  L  G  S  *  Y  P  W  G  N  Y  Y  I  W :   A  E  *  K  I  P  T  Q  A  Q  V  T  S  I  Q  R  E  I  *  Y  N  H  S  *  F  R  C  R  R  V  C  A  M  S  A  R  F  T  I  R  S  F  *  N  G  F  C  E  F  *  E  G  T  W  I  T  C  C  *  C  P  *  F  L  S  Q  R  I  *  Y  Y  Y  R  I  C  T  *  F  P  S  S  *  R  L  C  C  G  G  F  S  S  R  C  *  H  P  R  K  S  L  *  G  Y  F  S  N  A  *  G  I   : C  T  T  E  A  Q  E  *  K  T  K  I  P  C  I  *  T  F  C  N  *  *  R  E  R  R  E  *  I  I  K  E  *  K  K  V  R  E  C  I  *  T  S  R  *  V  *  *  R  R  N  W  *  W  G  I  C  A  *  T  S  *  *  F  C  Y  N  W  E  *  *  G  V  F  G  G  K  *  L  T  R  E  K  G  T  E  E  V  Q  E  N  S  Y  *  G  R  K  T  S  *  E  E  *  K  D  C  *  S  F  *  S  G  S  Q  Q  E  A  *  E  V  F  S  F  H  S  S  K  E  E  N  S :   G  *  G  F  A  *  G  S  H  G  *  D  *  L  F  K  G  A  Y  *  G  S  N  F  I  S  *  A  Q  R  A  V  G   : E  K  R  C  S  S  V  T  D  A  S  Y  Y  Y  R  S  E  :  C  W  C  I  C  F  *  L  *  *  G  *  D  L  C  F  R  *  R  W  G  S  *  *  S  *  *  K  Y  Y  G  *  R  Y  F  F  L  L  Q  L  S  D  L  H  G  Q  D  P  Q  H  K  V  V  K  T  G  H  R  T  F  L  *   : G  C  A  A  V  W  D  R  F  I  P  Y  T  T  T  F  S  W  P  D  T  *  T  A  K  A  K  I  Q  E  R  R  A  A  K  S  I  *  A  S  *  C  S  N  K  S  F  E  R :   S  F  P  L  R  T  S  N  R  A  F  K  A  N  *  S  *  G  I  A  V  R  *  *  R  R  V  N  *  L  D  W  G  G  G  N  G  G  E  S  G  D  L   : *  R  S  E  V  *  T  C  *  G  K  R  S  *  N  S  G  A  R  C  S  E  S  S  *  G  V  *  *  *  *  R  *  F  H  E  M  E  S  V  Y  E  *  S  V  N  D  V  K  F  Q  L  I  Y  I  L  L  P  Q  G  I  F  T  S  L  L  L  N  S  F  L  N  S  G  Q  Q  Y  G  V  L  E  I  I  I  S  T  E  Y  S  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1438" stop="1495"/>
                    <exon start="1574" stop="1905"/>
                    <exon start="2021" stop="2411"/>
                    <exon start="2492" stop="2592"/>
                    <exon start="2726" stop="2775"/>
                    <exon start="3584" stop="3770"/>
                    <exon start="4509" stop="4653"/>
                    <exon start="4980" stop="5110"/>
                    <exon start="5417" stop="5551"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1527</number_coding_nucleotides>
                  <number_encoded_amino_acids>509</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETDTYSFLEADILGVTTISGQSRRFQPKPKLQVYRERYDTIIPDLDVGESVPCLPDSQSVHSEMDFVNSEKGHGLPAADVLDFSVRGFDIITESAHDFPVHEDYVVEASLPDADIPENHSEATSQMPEESVPQRPKNKKQKFPASELSAISEENGESRLLRSRRKSVNASRLVDESDEDVIGDGEYVPEHPNDSVTIGNDEEFLVENDSQGKKVQKKSKKTVTKEGKRVRKSKKTAEASDQAANKKPKKFSHSTRQKRRTVDKALLEAPMDEIDYSKVPIKDLILLAEHRERLAKKDAAVSQMPPTTTDQSAGASVSNYDEDETYASDEDGEADDHNKSTMGEDTSSYFNYQTYMDKTPSTRWSKQDTELFYEAVQQFGTDLSLIQQLFPGRTRRQLKLKYKKEERQNPFRLHDVLTNRSKDHSHFERVIEHLKQIEAEELQYADKDESIDLTGEEEMVGNQEICEEAKSEHVEEKEVETVEQDVPNPVKEYDDDEDDFMKWSQYTSEV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="1438" e_stop="1495"/>
            <exon e_start="1574" e_stop="1905"/>
            <exon e_start="2021" e_stop="2411"/>
            <exon e_start="2492" e_stop="2592"/>
            <exon e_start="2726" e_stop="2775"/>
            <exon e_start="3584" e_stop="3770"/>
            <exon e_start="4509" e_stop="4653"/>
            <exon e_start="4980" e_stop="5110"/>
            <exon e_start="5414" e_stop="5797"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.829" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.968" e_score="0.997"/>
          <exon-intron don_prob="0.896" acc_prob="0.767" e_score="0.992"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1438" e_stop="1495" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.829" acc_prob="0.999">
            <gDNA_intron_boundary i_start="1496" i_stop="1573" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="1574" e_stop="1905" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.968">
            <gDNA_intron_boundary i_start="1906" i_stop="2020" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="2021" e_stop="2411" e_length="391"/>
          </exon>
          <intron i_serial="3" don_prob="0.896" acc_prob="0.767">
            <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2492" e_stop="2592" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="2726" e_stop="2775" e_length="50"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="3584" e_stop="3770" e_length="187"/>
          </exon>
          <intron i_serial="6" don_prob="0.956" acc_prob="0.972">
            <gDNA_intron_boundary i_start="3771" i_stop="4508" i_length="738"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="4509" e_stop="4653" e_length="145"/>
          </exon>
          <intron i_serial="7" don_prob="0.987" acc_prob="0.945">
            <gDNA_intron_boundary i_start="4654" i_stop="4979" i_length="326"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="4980" e_stop="5110" e_length="131"/>
          </exon>
          <intron i_serial="8" don_prob="0.992" acc_prob="0.000">
            <gDNA_intron_boundary i_start="5111" i_stop="5413" i_length="303"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="5414" e_stop="5797" e_length="384"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1438" stop="1495"/>
              <exon start="1574" stop="1905"/>
              <exon start="2021" stop="2373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2146" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550717" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2146" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2147" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2277" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3770"/>
              <exon start="4509" stop="4631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2518" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3770"/>
              <exon start="4509" stop="4653"/>
              <exon start="4980" stop="5008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273926" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4980" stop="5110"/>
              <exon start="5414" stop="5797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309025" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAACGGACACCTACTCTTTCTTGGAAGCTGATATCCTTGGGGTAACTACTATATCTG : GGCAGAGTAGAAGATTCCAACCCAAGCCCAAGTTACAAGTATACAGAGAGAGATATGATACAATCATTCCTGATTTAGATGTAGGAGAGTCTGTGCCATGTCTGCCAGATTCACAATCCGTTCATTCTGAAATGGATTTTGTGAATTCTGAGAAGGGACATGGATTACCTGCTGCTGATGTCCTTGATTTCTCAGTCAGAGGATTTGATATTATTACAGAATCTGCACATGATTTCCCAGTTCATGAAGACTATGTTGTGGAGGCTTCTCTTCCAGATGCTGACATCCCAGAAAATCACTCTGAGGCTACTTCTCAAATGCCTGAGGAATCT : GTACCACAGAGGCCCAAGAATAAAAAACAAAAATTCCCTGCATCTGAACTTTCTGCAATTAGTGAAGAGAACGGAGAGAGTAGATTATTAAGGAGTAGAAGAAAGTCCGTGAATGCATCTAGACTAGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG : TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG : AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG : TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAG : GCTGTGCAGCAGTTTGGGACAGATTTATCCCTTATACAACAACTTTTTCCTGGCCGGACACGTAGACAGCTAAAGCTAAAATACAAGAAAGAAGAGCGGCAAAATCCATTTAGGCTTCATGATGTTCTAACAAATCGTTCGAAAG : ATCATTCCCACTTCGAACGAGTAATCGAGCATTTAAAGCAAATTGAAGCTGAGGAATTGCAGTACGCTGATAAAGACGAGTCAATTGACTTGACTGGGGAGGAGGAAATGGTGGGGAATCAGGAGATCTGT : CAGGAAGAAGCGAAGTCTGAACATGTTGAGGAAAAAGAAGTTGAAACAGTGGAGCAAGATGTTCCGAATCCAGTTAAGGAGTATGATGATGATGAAGATGATTTCATGAAATGGAGTCAGTATACGAGTGAAGTGTGAATGATGTTAAGTTTCAGTTAATCTATATTCTCCTGCCACAAGGGATCTTTACATCTCTTTTGTTAAATTCCTTTTTGAACTCGGGCCAACAATATGGTGTACTTGAGATAATCATTTCAACGGAATATAGCAAAAGGGCCAAGTGTTATTAATATGTAGTGACAATGTAAAGAAAATTTGTTCTGATACGTCAGTTTAATAGTGTAAAAAATTCTTCGTACTATTAAAGTTGAAATATTCAACAGT</gDNA_template>
            <first_frame> E  T  D  T  Y  S  F  L  E  A  D  I  L  G  V  T  T  I  S   : G  Q  S  R  R  F  Q  P  K  P  K  L  Q  V  Y  R  E  R  Y  D  T  I  I  P  D  L  D  V  G  E  S  V  P  C  L  P  D  S  Q  S  V  H  S  E  M  D  F  V  N  S  E  K  G  H  G  L  P  A  A  D  V  L  D  F  S  V  R  G  F  D  I  I  T  E  S  A  H  D  F  P  V  H  E  D  Y  V  V  E  A  S  L  P  D  A  D  I  P  E  N  H  S  E  A  T  S  Q  M  P  E  E  S  :  V  P  Q  R  P  K  N  K  K  Q  K  F  P  A  S  E  L  S  A  I  S  E  E  N  G  E  S  R  L  L  R  S  R  R  K  S  V  N  A  S  R  L  V  D  E  S  D  E  D  V  I  G  D  G  E  Y  V  P  E  H  P  N  D  S  V  T  I  G  N  D  E  E  F  L  V  E  N  D  S  Q  G  K  K  V  Q  K  K  S  K  K  T  V  T  K  E  G  K  R  V  R  K  S  K  K  T  A  E  A  S  D  Q  A  A  N  K  K  P  K  K  F  S  H  S  T  R  Q  K  R  R  T   : V  D  K  A  L  L  E  A  P  M  D  E  I  D  Y  S  K  V  P  I  K  D  L  I  L  L  A  E  H  R  E  R  L  A  :  K  K  D  A  A  V  S  Q  M  P  P  T  T  T  D  Q  S :   A  G  A  S  V  S  N  Y  D  E  D  E  T  Y  A  S  D  E  D  G  E  A  D  D  H  N  K  S  T  M  G  E  D  T  S  S  Y  F  N  Y  Q  T  Y  M  D  K  T  P  S  T  R  W  S  K  Q  D  T  E  L  F  Y  E  :  A  V  Q  Q  F  G  T  D  L  S  L  I  Q  Q  L  F  P  G  R  T  R  R  Q  L  K  L  K  Y  K  K  E  E  R  Q  N  P  F  R  L  H  D  V  L  T  N  R  S  K   : D  H  S  H  F  E  R  V  I  E  H  L  K  Q  I  E  A  E  E  L  Q  Y  A  D  K  D  E  S  I  D  L  T  G  E  E  E  M  V  G  N  Q  E  I  C  :  Q  E  E  A  K  S  E  H  V  E  E  K  E  V  E  T  V  E  Q  D  V  P  N  P  V  K  E  Y  D  D  D  E  D  D  F  M  K  W  S  Q  Y  T  S  E  V  *  M  M  L  S  F  S  *  S  I  F  S  C  H  K  G  S  L  H  L  F  C  *  I  P  F  *  T  R  A  N  N  M  V  Y  L  R  *  S  F  Q  R  N  I  A  K  G  P  S  V  I  N  M  *  *  Q  C  K  E  N  L  F  *  Y  V  S  L  I  V  *  K  I  L  R  T  I  K  V  E  I  F  N  S </first_frame>
            <second_frame>  K  R  T  P  T  L  S  W  K  L  I  S  L  G  *  L  L  Y  L  :  G  R  V  E  D  S  N  P  S  P  S  Y  K  Y  T  E  R  D  M  I  Q  S  F  L  I  *  M  *  E  S  L  C  H  V  C  Q  I  H  N  P  F  I  L  K  W  I  L  *  I  L  R  R  D  M  D  Y  L  L  L  M  S  L  I  S  Q  S  E  D  L  I  L  L  Q  N  L  H  M  I  S  Q  F  M  K  T  M  L  W  R  L  L  F  Q  M  L  T  S  Q  K  I  T  L  R  L  L  L  K  C  L  R  N  L :   Y  H  R  G  P  R  I  K  N  K  N  S  L  H  L  N  F  L  Q  L  V  K  R  T  E  R  V  D  Y  *  G  V  E  E  S  P  *  M  H  L  D  *  *  M  S  L  M  K  T  *  L  V  M  G  N  M  C  L  N  I  L  M  I  L  L  Q  L  G  M  M  R  S  F  W  W  K  M  T  H  K  G  K  R  Y  R  R  S  P  R  K  Q  L  L  R  K  E  N  E  L  G  R  V  K  R  L  L  K  L  L  I  R  Q  P  T  R  S  L  R  S  F  L  I  P  L  V  K  R  G  E  Q  :  W  I  R  L  C  L  R  L  P  W  M  R  L  T  I  Q  R  C  L  L  R  I  *  F  Y  *  L  S  T  E  S  G  W  R :   K  K  M  Q  Q  C  H  R  C  L  L  L  L  Q  I  R   : V  L  V  H  L  F  L  I  M  M  R  M  R  P  M  L  Q  M  K  M  G  K  L  M  I  I  I  K  V  L  W  V  K  I  L  L  P  T  S  I  I  R  L  T  W  T  R  P  P  A  Q  G  G  Q  N  R  T  Q  N  F  S  M  R :   L  C  S  S  L  G  Q  I  Y  P  L  Y  N  N  F  F  L  A  G  H  V  D  S  *  S  *  N  T  R  K  K  S  G  K  I  H  L  G  F  M  M  F  *  Q  I  V  R  K  :  I  I  P  T  S  N  E  *  S  S  I  *  S  K  L  K  L  R  N  C  S  T  L  I  K  T  S  Q  L  T  *  L  G  R  R  K  W  W  G  I  R  R  S  V :   R  K  K  R  S  L  N  M  L  R  K  K  K  L  K  Q  W  S  K  M  F  R  I  Q  L  R  S  M  M  M  M  K  M  I  S  *  N  G  V  S  I  R  V  K  C  E  *  C  *  V  S  V  N  L  Y  S  P  A  T  R  D  L  Y  I  S  F  V  K  F  L  F  E  L  G  P  T  I  W  C  T  *  D  N  H  F  N  G  I  *  Q  K  G  Q  V  L  L  I  C  S  D  N  V  K  K  I  C  S  D  T  S  V  *  *  C  K  K  F  F  V  L  L  K  L  K  Y  S  T   </second_frame>
            <third_frame>   N  G  H  L  L  F  L  G  S  *  Y  P  W  G  N  Y  Y  I  W :   A  E  *  K  I  P  T  Q  A  Q  V  T  S  I  Q  R  E  I  *  Y  N  H  S  *  F  R  C  R  R  V  C  A  M  S  A  R  F  T  I  R  S  F  *  N  G  F  C  E  F  *  E  G  T  W  I  T  C  C  *  C  P  *  F  L  S  Q  R  I  *  Y  Y  Y  R  I  C  T  *  F  P  S  S  *  R  L  C  C  G  G  F  S  S  R  C  *  H  P  R  K  S  L  *  G  Y  F  S  N  A  *  G  I   : C  T  T  E  A  Q  E  *  K  T  K  I  P  C  I  *  T  F  C  N  *  *  R  E  R  R  E  *  I  I  K  E  *  K  K  V  R  E  C  I  *  T  S  R  *  V  *  *  R  R  N  W  *  W  G  I  C  A  *  T  S  *  *  F  C  Y  N  W  E  *  *  G  V  F  G  G  K  *  L  T  R  E  K  G  T  E  E  V  Q  E  N  S  Y  *  G  R  K  T  S  *  E  E  *  K  D  C  *  S  F  *  S  G  S  Q  Q  E  A  *  E  V  F  S  F  H  S  S  K  E  E  N  S :   G  *  G  F  A  *  G  S  H  G  *  D  *  L  F  K  G  A  Y  *  G  S  N  F  I  S  *  A  Q  R  A  V  G   : E  K  R  C  S  S  V  T  D  A  S  Y  Y  Y  R  S  E  :  C  W  C  I  C  F  *  L  *  *  G  *  D  L  C  F  R  *  R  W  G  S  *  *  S  *  *  K  Y  Y  G  *  R  Y  F  F  L  L  Q  L  S  D  L  H  G  Q  D  P  Q  H  K  V  V  K  T  G  H  R  T  F  L  *   : G  C  A  A  V  W  D  R  F  I  P  Y  T  T  T  F  S  W  P  D  T  *  T  A  K  A  K  I  Q  E  R  R  A  A  K  S  I  *  A  S  *  C  S  N  K  S  F  E  R :   S  F  P  L  R  T  S  N  R  A  F  K  A  N  *  S  *  G  I  A  V  R  *  *  R  R  V  N  *  L  D  W  G  G  G  N  G  G  E  S  G  D  L   : S  G  R  S  E  V  *  T  C  *  G  K  R  S  *  N  S  G  A  R  C  S  E  S  S  *  G  V  *  *  *  *  R  *  F  H  E  M  E  S  V  Y  E  *  S  V  N  D  V  K  F  Q  L  I  Y  I  L  L  P  Q  G  I  F  T  S  L  L  L  N  S  F  L  N  S  G  Q  Q  Y  G  V  L  E  I  I  I  S  T  E  Y  S  K  R  A  K  C  Y  *  Y  V  V  T  M  *  R  K  F  V  L  I  R  Q  F  N  S  V  K  N  S  S  Y  Y  *  S  *  N  I  Q  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1438" stop="1495"/>
                    <exon start="1574" stop="1905"/>
                    <exon start="2021" stop="2411"/>
                    <exon start="2492" stop="2592"/>
                    <exon start="2726" stop="2775"/>
                    <exon start="3584" stop="3770"/>
                    <exon start="4509" stop="4653"/>
                    <exon start="4980" stop="5110"/>
                    <exon start="5414" stop="5551"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1530</number_coding_nucleotides>
                  <number_encoded_amino_acids>510</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETDTYSFLEADILGVTTISGQSRRFQPKPKLQVYRERYDTIIPDLDVGESVPCLPDSQSVHSEMDFVNSEKGHGLPAADVLDFSVRGFDIITESAHDFPVHEDYVVEASLPDADIPENHSEATSQMPEESVPQRPKNKKQKFPASELSAISEENGESRLLRSRRKSVNASRLVDESDEDVIGDGEYVPEHPNDSVTIGNDEEFLVENDSQGKKVQKKSKKTVTKEGKRVRKSKKTAEASDQAANKKPKKFSHSTRQKRRTVDKALLEAPMDEIDYSKVPIKDLILLAEHRERLAKKDAAVSQMPPTTTDQSAGASVSNYDEDETYASDEDGEADDHNKSTMGEDTSSYFNYQTYMDKTPSTRWSKQDTELFYEAVQQFGTDLSLIQQLFPGRTRRQLKLKYKKEERQNPFRLHDVLTNRSKDHSHFERVIEHLKQIEAEELQYADKDESIDLTGEEEMVGNQEICQEEAKSEHVEEKEVETVEQDVPNPVKEYDDDEDDFMKWSQYTSEV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="1438" e_stop="1495"/>
            <exon e_start="1574" e_stop="1905"/>
            <exon e_start="2021" e_stop="2411"/>
            <exon e_start="2492" e_stop="2592"/>
            <exon e_start="2726" e_stop="2775"/>
            <exon e_start="3584" e_stop="3825"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.829" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.968" e_score="0.997"/>
          <exon-intron don_prob="0.896" acc_prob="0.767" e_score="0.992"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1438" e_stop="1495" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.829" acc_prob="0.999">
            <gDNA_intron_boundary i_start="1496" i_stop="1573" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="1574" e_stop="1905" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.968">
            <gDNA_intron_boundary i_start="1906" i_stop="2020" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="2021" e_stop="2411" e_length="391"/>
          </exon>
          <intron i_serial="3" don_prob="0.896" acc_prob="0.767">
            <gDNA_intron_boundary i_start="2412" i_stop="2491" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2492" e_stop="2592" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="2593" i_stop="2725" i_length="133"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="2726" e_stop="2775" e_length="50"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="2776" i_stop="3583" i_length="808"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="3584" e_stop="3825" e_length="242"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1438" stop="1495"/>
              <exon start="1574" stop="1905"/>
              <exon start="2021" stop="2373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2146" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550717" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2146" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2147" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2270" stop="2411"/>
              <exon start="2492" stop="2592"/>
              <exon start="2726" stop="2775"/>
              <exon start="3584" stop="3825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249489" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAACGGACACCTACTCTTTCTTGGAAGCTGATATCCTTGGGGTAACTACTATATCTG : GGCAGAGTAGAAGATTCCAACCCAAGCCCAAGTTACAAGTATACAGAGAGAGATATGATACAATCATTCCTGATTTAGATGTAGGAGAGTCTGTGCCATGTCTGCCAGATTCACAATCCGTTCATTCTGAAATGGATTTTGTGAATTCTGAGAAGGGACATGGATTACCTGCTGCTGATGTCCTTGATTTCTCAGTCAGAGGATTTGATATTATTACAGAATCTGCACATGATTTCCCAGTTCATGAAGACTATGTTGTGGAGGCTTCTCTTCCAGATGCTGACATCCCAGAAAATCACTCTGAGGCTACTTCTCAAATGCCTGAGGAATCT : GTACCACAGAGGCCCAAGAATAAAAAACAAAAATTCCCTGCATCTGAACTTTCTGCAATTAGTGAAGAGAACGGAGAGAGTAGATTATTAAGGAGTAGAAGAAAGTCCGTGAATGCATCTAGACTAGTAGATGAGTCTGATGAAGACGTAATTGGTGATGGGGAATATGTGCCTGAACATCCTAATGATTCTGTTACAATTGGGAATGATGAGGAGTTTTTGGTGGAAAATGACTCACAAGGGAAAAAGGTACAGAAGAAGTCCAAGAAAACAGTTACTAAGGAAGGAAAACGAGTTAGGAAGAGTAAAAAGACTGCTGAAGCTTCTGATCAGGCAGCCAACAAGAAGCCTAAGAAGTTTTCTCATTCCACTCGTCAAAAGAGGAGAACAG : TGGATAAGGCTTTGCTTGAGGCTCCCATGGATGAGATTGACTATTCAAAGGTGCCTATTAAGGATCTAATTTTATTAGCTGAGCACAGAGAGCGGTTGGCG : AAAAAAGATGCAGCAGTGTCACAGATGCCTCCTACTACTACAGATCAGAG : TGCTGGTGCATCTGTTTCTAATTATGATGAGGATGAGACCTATGCTTCAGATGAAGATGGGGAAGCTGATGATCATAATAAAAGTACTATGGGTGAAGATACTTCTTCCTACTTCAATTATCAGACTTACATGGACAAGACCCCCAGCACAAGGTGGTCAAAACAGGACACAGAACTTTTCTATGAGGTACACCCCTTTCATTTGTAGCCTACTGAATGATGCATAAGTAAAATTGGGAGAT</gDNA_template>
            <first_frame> E  T  D  T  Y  S  F  L  E  A  D  I  L  G  V  T  T  I  S   : G  Q  S  R  R  F  Q  P  K  P  K  L  Q  V  Y  R  E  R  Y  D  T  I  I  P  D  L  D  V  G  E  S  V  P  C  L  P  D  S  Q  S  V  H  S  E  M  D  F  V  N  S  E  K  G  H  G  L  P  A  A  D  V  L  D  F  S  V  R  G  F  D  I  I  T  E  S  A  H  D  F  P  V  H  E  D  Y  V  V  E  A  S  L  P  D  A  D  I  P  E  N  H  S  E  A  T  S  Q  M  P  E  E  S  :  V  P  Q  R  P  K  N  K  K  Q  K  F  P  A  S  E  L  S  A  I  S  E  E  N  G  E  S  R  L  L  R  S  R  R  K  S  V  N  A  S  R  L  V  D  E  S  D  E  D  V  I  G  D  G  E  Y  V  P  E  H  P  N  D  S  V  T  I  G  N  D  E  E  F  L  V  E  N  D  S  Q  G  K  K  V  Q  K  K  S  K  K  T  V  T  K  E  G  K  R  V  R  K  S  K  K  T  A  E  A  S  D  Q  A  A  N  K  K  P  K  K  F  S  H  S  T  R  Q  K  R  R  T   : V  D  K  A  L  L  E  A  P  M  D  E  I  D  Y  S  K  V  P  I  K  D  L  I  L  L  A  E  H  R  E  R  L  A  :  K  K  D  A  A  V  S  Q  M  P  P  T  T  T  D  Q  S :   A  G  A  S  V  S  N  Y  D  E  D  E  T  Y  A  S  D  E  D  G  E  A  D  D  H  N  K  S  T  M  G  E  D  T  S  S  Y  F  N  Y  Q  T  Y  M  D  K  T  P  S  T  R  W  S  K  Q  D  T  E  L  F  Y  E  V  H  P  F  H  L  *  P  T  E  *  C  I  S  K  I  G  R  </first_frame>
            <second_frame>  K  R  T  P  T  L  S  W  K  L  I  S  L  G  *  L  L  Y  L  :  G  R  V  E  D  S  N  P  S  P  S  Y  K  Y  T  E  R  D  M  I  Q  S  F  L  I  *  M  *  E  S  L  C  H  V  C  Q  I  H  N  P  F  I  L  K  W  I  L  *  I  L  R  R  D  M  D  Y  L  L  L  M  S  L  I  S  Q  S  E  D  L  I  L  L  Q  N  L  H  M  I  S  Q  F  M  K  T  M  L  W  R  L  L  F  Q  M  L  T  S  Q  K  I  T  L  R  L  L  L  K  C  L  R  N  L :   Y  H  R  G  P  R  I  K  N  K  N  S  L  H  L  N  F  L  Q  L  V  K  R  T  E  R  V  D  Y  *  G  V  E  E  S  P  *  M  H  L  D  *  *  M  S  L  M  K  T  *  L  V  M  G  N  M  C  L  N  I  L  M  I  L  L  Q  L  G  M  M  R  S  F  W  W  K  M  T  H  K  G  K  R  Y  R  R  S  P  R  K  Q  L  L  R  K  E  N  E  L  G  R  V  K  R  L  L  K  L  L  I  R  Q  P  T  R  S  L  R  S  F  L  I  P  L  V  K  R  G  E  Q  :  W  I  R  L  C  L  R  L  P  W  M  R  L  T  I  Q  R  C  L  L  R  I  *  F  Y  *  L  S  T  E  S  G  W  R :   K  K  M  Q  Q  C  H  R  C  L  L  L  L  Q  I  R   : V  L  V  H  L  F  L  I  M  M  R  M  R  P  M  L  Q  M  K  M  G  K  L  M  I  I  I  K  V  L  W  V  K  I  L  L  P  T  S  I  I  R  L  T  W  T  R  P  P  A  Q  G  G  Q  N  R  T  Q  N  F  S  M  R  Y  T  P  F  I  C  S  L  L  N  D  A  *  V  K  L  G  D </second_frame>
            <third_frame>   N  G  H  L  L  F  L  G  S  *  Y  P  W  G  N  Y  Y  I  W :   A  E  *  K  I  P  T  Q  A  Q  V  T  S  I  Q  R  E  I  *  Y  N  H  S  *  F  R  C  R  R  V  C  A  M  S  A  R  F  T  I  R  S  F  *  N  G  F  C  E  F  *  E  G  T  W  I  T  C  C  *  C  P  *  F  L  S  Q  R  I  *  Y  Y  Y  R  I  C  T  *  F  P  S  S  *  R  L  C  C  G  G  F  S  S  R  C  *  H  P  R  K  S  L  *  G  Y  F  S  N  A  *  G  I   : C  T  T  E  A  Q  E  *  K  T  K  I  P  C  I  *  T  F  C  N  *  *  R  E  R  R  E  *  I  I  K  E  *  K  K  V  R  E  C  I  *  T  S  R  *  V  *  *  R  R  N  W  *  W  G  I  C  A  *  T  S  *  *  F  C  Y  N  W  E  *  *  G  V  F  G  G  K  *  L  T  R  E  K  G  T  E  E  V  Q  E  N  S  Y  *  G  R  K  T  S  *  E  E  *  K  D  C  *  S  F  *  S  G  S  Q  Q  E  A  *  E  V  F  S  F  H  S  S  K  E  E  N  S :   G  *  G  F  A  *  G  S  H  G  *  D  *  L  F  K  G  A  Y  *  G  S  N  F  I  S  *  A  Q  R  A  V  G   : E  K  R  C  S  S  V  T  D  A  S  Y  Y  Y  R  S  E  :  C  W  C  I  C  F  *  L  *  *  G  *  D  L  C  F  R  *  R  W  G  S  *  *  S  *  *  K  Y  Y  G  *  R  Y  F  F  L  L  Q  L  S  D  L  H  G  Q  D  P  Q  H  K  V  V  K  T  G  H  R  T  F  L  *  G  T  P  L  S  F  V  A  Y  *  M  M  H  K  *  N  W  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1438" stop="1495"/>
                    <exon start="1574" stop="1905"/>
                    <exon start="2021" stop="2411"/>
                    <exon start="2492" stop="2592"/>
                    <exon start="2726" stop="2775"/>
                    <exon start="3584" stop="3791"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1137</number_coding_nucleotides>
                  <number_encoded_amino_acids>379</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETDTYSFLEADILGVTTISGQSRRFQPKPKLQVYRERYDTIIPDLDVGESVPCLPDSQSVHSEMDFVNSEKGHGLPAADVLDFSVRGFDIITESAHDFPVHEDYVVEASLPDADIPENHSEATSQMPEESVPQRPKNKKQKFPASELSAISEENGESRLLRSRRKSVNASRLVDESDEDVIGDGEYVPEHPNDSVTIGNDEEFLVENDSQGKKVQKKSKKTVTKEGKRVRKSKKTAEASDQAANKKPKKFSHSTRQKRRTVDKALLEAPMDEIDYSKVPIKDLILLAEHRERLAKKDAAVSQMPPTTTDQSAGASVSNYDEDETYASDEDGEADDHNKSTMGEDTSSYFNYQTYMDKTPSTRWSKQDTELFYEVHPFHL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="7318" PGL_stop="14833"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7318" e_stop="7452"/>
            <exon e_start="9678" e_stop="9801"/>
            <exon e_start="10379" e_stop="10444"/>
            <exon e_start="11384" e_stop="11422"/>
            <exon e_start="12206" e_stop="12286"/>
            <exon e_start="12406" e_stop="12453"/>
            <exon e_start="13140" e_stop="13190"/>
            <exon e_start="13355" e_stop="13423"/>
            <exon e_start="13968" e_stop="14201"/>
            <exon e_start="14369" e_stop="14833"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.273" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.997" e_score="0.991"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7318" e_stop="7452" e_length="135"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="7453" i_stop="9677" i_length="2225"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9678" e_stop="9801" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.273">
            <gDNA_intron_boundary i_start="9802" i_stop="10378" i_length="577"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10379" e_stop="10444" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.984">
            <gDNA_intron_boundary i_start="10445" i_stop="11383" i_length="939"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11384" e_stop="11422" e_length="39"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.975">
            <gDNA_intron_boundary i_start="11423" i_stop="12205" i_length="783"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="12206" e_stop="12286" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="12287" i_stop="12405" i_length="119"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="12406" e_stop="12453" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.968" acc_prob="0.995">
            <gDNA_intron_boundary i_start="12454" i_stop="13139" i_length="686"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="13140" e_stop="13190" e_length="51"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.929">
            <gDNA_intron_boundary i_start="13191" i_stop="13354" i_length="164"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="13355" e_stop="13423" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.898" acc_prob="0.990">
            <gDNA_intron_boundary i_start="13424" i_stop="13967" i_length="544"/>
          </intron>
          <exon e_serial="9" e_score="0.991">
            <gDNA_exon_boundary e_start="13968" e_stop="14201" e_length="234"/>
          </exon>
          <intron i_serial="9" don_prob="0.887" acc_prob="0.997">
            <gDNA_intron_boundary i_start="14202" i_stop="14368" i_length="167"/>
          </intron>
          <exon e_serial="10" e_score="0.996">
            <gDNA_exon_boundary e_start="14369" e_stop="14833" e_length="465"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7318" stop="7452"/>
              <exon start="9678" stop="9801"/>
              <exon start="10379" stop="10444"/>
              <exon start="11384" stop="11422"/>
              <exon start="12206" stop="12260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9726" stop="9801"/>
              <exon start="10379" stop="10444"/>
              <exon start="11384" stop="11422"/>
              <exon start="12206" stop="12286"/>
              <exon start="12406" stop="12453"/>
              <exon start="13140" stop="13190"/>
              <exon start="13355" stop="13423"/>
              <exon start="13968" stop="14201"/>
              <exon start="14369" stop="14411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13969" stop="14201"/>
              <exon start="14369" stop="14833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAGACCGCGTCCTCTTGACATTCACAAGAAGTTGCCAATTTTAAAATCTATCAAGGATTTTGAGGATGATGATTCCCAGACTAATACACGGAACCTTATCCTTCGTCTCGCTGCTGAAGCTACAGAAAATGAG : GTTGGAGGCAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAG : GCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAG : CGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAG : CCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGACTTCATACAAGAAGG : ATGCAAAGGAGGGAAAACAATGCACAGTCATTTGAAAAGCTTCGCCAG : GTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAG : AGAGAGGAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAG : AATGAAACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGAATCATGAAGCGAGAGTTCAAGCGAAGAAATGTGTCCCATGGATGGCTCTATAAATTG : GATCCAAATGAGCCAACTCTGCTGTTTACGAAACCTCTGGATCCAGCCAAATTGTCAGCTGCAGGCATTATACCTCCAGGTTCTCCAACACCAAATGGCCTACCTGCTCACACATTTAGCTTTCGTGGAAGGATGGGGCGAGGTGGTCGTATCGTGTTTGATAGATGGAATCCACTCAGCCATACACCCATGGATTGCGGTGATACTTTATATGTTCCACCGAAGGCTCGACATTCTGCACATCAATGACATGATCAGCACTTCATGAGCTTGTTTCTCAATCCCCTTGAAAGTTGTATATGTTGTATGATATTTGCATGGATGATGCTAAAGATGGAAGGGGAAATTTTGAACCAGTGATAATTGAAGAACCAAGTCCTGGAGATGCACGTACCGATTGTTGAAGGCAAATGTCATAAAATGAATGCTTAGAGCATCGTTTTGCCTCCTGTTTATGTTTTTGGG</gDNA_template>
            <first_frame> F  R  P  R  P  L  D  I  H  K  K  L  P  I  L  K  S  I  K  D  F  E  D  D  D  S  Q  T  N  T  R  N  L  I  L  R  L  A  A  E  A  T  E  N  E  :  V  G  G  N  F  V  *  T  R  S  F  R  S  Q  G  P  R  K  S  R  S  Y  S  K  Y  A  W  I  A  S  S  C  A  S  K  F  *  C  C  C  *   : G  L  A  I  F  I  H  *  I  W  S  I  P  V  Y  L  *  L  L  E  G  *   : A  G  A  V  A  E  A  F  S  S  A  F  A   : A  A  S  T  S  *  R  H  E  S  L  *  C  I  *  A  K  G  E  G  P  Q  T  S  Y  K  K   : D  A  K  E  G  K  Q  C  T  V  I  *  K  A  S  P   : G  *  A  Q  P  *  P  S  K  D  H  S  *  G  S  H  Q   : E  R  G  E  E  A  R  G  Y  *  *  *  D  *  P  P  E  T  S  N  E  T  Q   : E  *  N  *  A  F  C  G  C  L  Y  S  A  *  I  S  F  L  P  K  *  G  W  F  K  *  G  R  I  C  R  L  *  *  S  F  Y  *  S  S  A  Y  S  T  K  H  Y  L  P  G  P  E  A  G  D  C  F  S  *  N  H  E  A  R  V  Q  A  K  K  C  V  P  W  M  A  L  *  I   : G  S  K  *  A  N  S  A  V  Y  E  T  S  G  S  S  Q  I  V  S  C  R  H  Y  T  S  R  F  S  N  T  K  W  P  T  C  S  H  I  *  L  S  W  K  D  G  A  R  W  S  Y  R  V  *  *  M  E  S  T  Q  P  Y  T  H  G  L  R  *  Y  F  I  C  S  T  E  G  S  T  F  C  T  S  M  T  *  S  A  L  H  E  L  V  S  Q  S  P  *  K  L  Y  M  L  Y  D  I  C  M  D  D  A  K  D  G  R  G  N  F  E  P  V  I  I  E  E  P  S  P  G  D  A  R  T  D  C  *  R  Q  M  S  *  N  E  C  L  E  H  R  F  A  S  C  L  C  F  W  </first_frame>
            <second_frame>  L  D  R  V  L  L  T  F  T  R  S  C  Q  F  *  N  L  S  R  I  L  R  M  M  I  P  R  L  I  H  G  T  L  S  F  V  S  L  L  K  L  Q  K  M  R :   L  E  A  I  L  Y  K  L  E  V  L  D  H  K  A  R  E  R  A  G  V  I  A  N  T  L  G  S  P  V  P  V  L  L  S  F  D  A  A  V  E  :  A  L  Q  S  L  S  I  K  Y  G  V  F  Q  S  I  Y  N  Y  W  K  D  K  :  R  E  R  L  Q  K  P  S  L  R  R  L  Q  :  P  P  P  P  V  N  D  T  N  P  Y  N  V  F  R  P  R  E  K  A  H  R  L  H  T  R  R  :  M  Q  R  R  E  N  N  A  Q  S  F  E  K  L  R  Q  :  V  R  R  N  L  D  Q  A  K  I  I  L  E  A  L  I  K  :  R  E  E  K  K  R  E  V  I  D  S  E  I  S  L  Q  R  L  Q  M  K  H  K  :  N  E  T  E  L  F  V  D  A  F  T  L  P  E  F  P  S  F  P  S  K  V  G  S  S  E  D  E  F  V  D  S  D  D  P  S  T  S  R  R  H  I  A  Q  N  I  T  F  P  D  P  K  L  V  T  A  S  P  R  I  M  K  R  E  F  K  R  R  N  V  S  H  G  W  L  Y  K  L  :  D  P  N  E  P  T  L  L  F  T  K  P  L  D  P  A  K  L  S  A  A  G  I  I  P  P  G  S  P  T  P  N  G  L  P  A  H  T  F  S  F  R  G  R  M  G  R  G  G  R  I  V  F  D  R  W  N  P  L  S  H  T  P  M  D  C  G  D  T  L  Y  V  P  P  K  A  R  H  S  A  H  Q  *  H  D  Q  H  F  M  S  L  F  L  N  P  L  E  S  C  I  C  C  M  I  F  A  W  M  M  L  K  M  E  G  E  I  L  N  Q  *  *  L  K  N  Q  V  L  E  M  H  V  P  I  V  E  G  K  C  H  K  M  N  A  *  S  I  V  L  P  P  V  Y  V  F  G </second_frame>
            <third_frame>   *  T  A  S  S  *  H  S  Q  E  V  A  N  F  K  I  Y  Q  G  F  *  G  *  *  F  P  D  *  Y  T  E  P  Y  P  S  S  R  C  *  S  Y  R  K  *   : G  W  R  Q  F  C  I  N  *  K  F  *  I  T  R  P  E  K  E  Q  E  L  *  Q  I  R  L  D  R  Q  F  L  C  F  *  V  L  M  L  L  L  R :   P  C  N  L  Y  P  L  N  M  E  Y  S  S  L  F  I  I  T  G  R  I  S :   G  S  G  C  R  S  L  L  F  G  V  C  S :   R  L  H  Q  L  T  T  R  I  L  I  M  Y  L  G  Q  G  R  R  P  T  D  F  I  Q  E  G :   C  K  G  G  K  T  M  H  S  H  L  K  S  F  A  R :   L  G  A  T  L  T  K  Q  R  S  F  L  R  L  S  S  R :   E  R  R  R  S  E  R  L  L  I  V  R  L  A  S  R  D  F  K  *  N  T  R :   M  K  L  S  F  L  W  M  P  L  L  C  L  N  F  L  P  S  Q  V  R  L  V  Q  V  R  T  N  L  S  T  L  M  I  L  L  L  V  V  G  I  *  H  K  T  L  P  S  R  T  R  S  W  *  L  L  L  L  E  S  *  S  E  S  S  S  E  E  M  C  P  M  D  G  S  I  N  W :   I  Q  M  S  Q  L  C  C  L  R  N  L  W  I  Q  P  N  C  Q  L  Q  A  L  Y  L  Q  V  L  Q  H  Q  M  A  Y  L  L  T  H  L  A  F  V  E  G  W  G  E  V  V  V  S  C  L  I  D  G  I  H  S  A  I  H  P  W  I  A  V  I  L  Y  M  F  H  R  R  L  D  I  L  H  I  N  D  M  I  S  T  S  *  A  C  F  S  I  P  L  K  V  V  Y  V  V  *  Y  L  H  G  *  C  *  R  W  K  G  K  F  *  T  S  D  N  *  R  T  K  S  W  R  C  T  Y  R  L  L  K  A  N  V  I  K  *  M  L  R  A  S  F  C  L  L  F  M  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7364" stop="7452"/>
                    <exon start="9678" stop="9801"/>
                    <exon start="10379" stop="10444"/>
                    <exon start="11384" stop="11422"/>
                    <exon start="12206" stop="12286"/>
                    <exon start="12406" stop="12453"/>
                    <exon start="13140" stop="13190"/>
                    <exon start="13355" stop="13423"/>
                    <exon start="13968" stop="14201"/>
                    <exon start="14369" stop="14617"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1047</number_coding_nucleotides>
                  <number_encoded_amino_acids>349</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLSRILRMMIPRLIHGTLSFVSLLKLQKMRLEAILYKLEVLDHKARERAGVIANTLGSPVPVLLSFDAAVEALQSLSIKYGVFQSIYNYWKDKRERLQKPSLRRLQPPPPVNDTNPYNVFRPREKAHRLHTRRMQRRENNAQSFEKLRQVRRNLDQAKIILEALIKREEKKREVIDSEISLQRLQMKHKNETELFVDAFTLPEFPSFPSKVGSSEDEFVDSDDPSTSRRHIAQNITFPDPKLVTASPRIMKREFKRRNVSHGWLYKLDPNEPTLLFTKPLDPAKLSAAGIIPPGSPTPNGLPAHTFSFRGRMGRGGRIVFDRWNPLSHTPMDCGDTLYVPPKARHSAHQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="7948" e_stop="8014"/>
            <exon e_start="9678" e_stop="9801"/>
            <exon e_start="10379" e_stop="10444"/>
            <exon e_start="11384" e_stop="11422"/>
            <exon e_start="12206" e_stop="12286"/>
            <exon e_start="12406" e_stop="12453"/>
            <exon e_start="13140" e_stop="13190"/>
            <exon e_start="13355" e_stop="13423"/>
            <exon e_start="13968" e_stop="14201"/>
            <exon e_start="14369" e_stop="14833"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.999" e_score="0.955"/>
          <exon-intron don_prob="0.997" acc_prob="0.273" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.898" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.887" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="7948" e_stop="8014" e_length="67"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8015" i_stop="9677" i_length="1663"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="9678" e_stop="9801" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.273">
            <gDNA_intron_boundary i_start="9802" i_stop="10378" i_length="577"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10379" e_stop="10444" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.984">
            <gDNA_intron_boundary i_start="10445" i_stop="11383" i_length="939"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11384" e_stop="11422" e_length="39"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.975">
            <gDNA_intron_boundary i_start="11423" i_stop="12205" i_length="783"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="12206" e_stop="12286" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="12287" i_stop="12405" i_length="119"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="12406" e_stop="12453" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.968" acc_prob="0.995">
            <gDNA_intron_boundary i_start="12454" i_stop="13139" i_length="686"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="13140" e_stop="13190" e_length="51"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.929">
            <gDNA_intron_boundary i_start="13191" i_stop="13354" i_length="164"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="13355" e_stop="13423" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.898" acc_prob="0.990">
            <gDNA_intron_boundary i_start="13424" i_stop="13967" i_length="544"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="13968" e_stop="14201" e_length="234"/>
          </exon>
          <intron i_serial="9" don_prob="0.887" acc_prob="0.997">
            <gDNA_intron_boundary i_start="14202" i_stop="14368" i_length="167"/>
          </intron>
          <exon e_serial="10" e_score="0.996">
            <gDNA_exon_boundary e_start="14369" e_stop="14833" e_length="465"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7948" stop="8014"/>
              <exon start="9678" stop="9801"/>
              <exon start="10379" stop="10444"/>
              <exon start="11384" stop="11422"/>
              <exon start="12206" stop="12286"/>
              <exon start="12406" stop="12453"/>
              <exon start="13140" stop="13190"/>
              <exon start="13355" stop="13423"/>
              <exon start="13968" stop="14201"/>
              <exon start="14369" stop="14440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709050" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9726" stop="9801"/>
              <exon start="10379" stop="10444"/>
              <exon start="11384" stop="11422"/>
              <exon start="12206" stop="12286"/>
              <exon start="12406" stop="12453"/>
              <exon start="13140" stop="13190"/>
              <exon start="13355" stop="13423"/>
              <exon start="13968" stop="14201"/>
              <exon start="14369" stop="14411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325633" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13969" stop="14201"/>
              <exon start="14369" stop="14833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710316" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGACAATGAGGATGAAGATTGGCTTCAAGAGTTCAACAGAGAAAGAAAAGTTCTTGCAGCTGAAAA : GTTGGAGGCAATTTTGTATAAACTAGAAGTTTTAGATCACAAGGCCCGAGAAAGAGCAGGAGTTATAGCAAATACGCTTGGATCGCCAGTTCCTGTGCTTCTAAGTTTTGATGCTGCTGTTGAG : GCCTTGCAATCTTTATCCATTAAATATGGAGTATTCCAGTCTATTTATAATTACTGGAAGGATAAG : CGGGAGCGGTTGCAGAAGCCTTCTCTTCGGCGTTTGCAG : CCGCCTCCACCAGTTAACGACACGAATCCTTATAATGTATTTAGGCCAAGGGAGAAGGCCCACAGACTTCATACAAGAAGG : ATGCAAAGGAGGGAAAACAATGCACAGTCATTTGAAAAGCTTCGCCAG : GTTAGGCGCAACCTTGACCAAGCAAAGATCATTCTTGAGGCTCTCATCAAG : AGAGAGGAGAAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAG : AATGAAACTGAGCTTTTTGTGGATGCCTTTACTCTGCCTGAATTTCCTTCCTTCCCAAGTAAGGTTGGTTCAAGTGAGGACGAATTTGTCGACTCTGATGATCCTTCTACTAGTCGTCGGCATATAGCACAAAACATTACCTTCCCGGACCCGAAGCTGGTGACTGCTTCTCCTAGAATCATGAAGCGAGAGTTCAAGCGAAGAAATGTGTCCCATGGATGGCTCTATAAATTG : GATCCAAATGAGCCAACTCTGCTGTTTACGAAACCTCTGGATCCAGCCAAATTGTCAGCTGCAGGCATTATACCTCCAGGTTCTCCAACACCAAATGGCCTACCTGCTCACACATTTAGCTTTCGTGGAAGGATGGGGCGAGGTGGTCGTATCGTGTTTGATAGATGGAATCCACTCAGCCATACACCCATGGATTGCGGTGATACTTTATATGTTCCACCGAAGGCTCGACATTCTGCACATCAATGACATGATCAGCACTTCATGAGCTTGTTTCTCAATCCCCTTGAAAGTTGTATATGTTGTATGATATTTGCATGGATGATGCTAAAGATGGAAGGGGAAATTTTGAACCAGTGATAATTGAAGAACCAAGTCCTGGAGATGCACGTACCGATTGTTGAAGGCAAATGTCATAAAATGAATGCTTAGAGCATCGTTTTGCCTCCTGTTTATGTTTTTGGG</gDNA_template>
            <first_frame> L  T  M  R  M  K  I  G  F  K  S  S  T  E  K  E  K  F  L  Q  L  K   : S  W  R  Q  F  C  I  N  *  K  F  *  I  T  R  P  E  K  E  Q  E  L  *  Q  I  R  L  D  R  Q  F  L  C  F  *  V  L  M  L  L  L  R :   P  C  N  L  Y  P  L  N  M  E  Y  S  S  L  F  I  I  T  G  R  I  S :   G  S  G  C  R  S  L  L  F  G  V  C  S :   R  L  H  Q  L  T  T  R  I  L  I  M  Y  L  G  Q  G  R  R  P  T  D  F  I  Q  E  G :   C  K  G  G  K  T  M  H  S  H  L  K  S  F  A  R :   L  G  A  T  L  T  K  Q  R  S  F  L  R  L  S  S  R :   E  R  R  R  S  E  R  L  L  I  V  R  L  A  S  R  D  F  K  *  N  T  R :   M  K  L  S  F  L  W  M  P  L  L  C  L  N  F  L  P  S  Q  V  R  L  V  Q  V  R  T  N  L  S  T  L  M  I  L  L  L  V  V  G  I  *  H  K  T  L  P  S  R  T  R  S  W  *  L  L  L  L  E  S  *  S  E  S  S  S  E  E  M  C  P  M  D  G  S  I  N  W :   I  Q  M  S  Q  L  C  C  L  R  N  L  W  I  Q  P  N  C  Q  L  Q  A  L  Y  L  Q  V  L  Q  H  Q  M  A  Y  L  L  T  H  L  A  F  V  E  G  W  G  E  V  V  V  S  C  L  I  D  G  I  H  S  A  I  H  P  W  I  A  V  I  L  Y  M  F  H  R  R  L  D  I  L  H  I  N  D  M  I  S  T  S  *  A  C  F  S  I  P  L  K  V  V  Y  V  V  *  Y  L  H  G  *  C  *  R  W  K  G  K  F  *  T  S  D  N  *  R  T  K  S  W  R  C  T  Y  R  L  L  K  A  N  V  I  K  *  M  L  R  A  S  F  C  L  L  F  M  F  L   </first_frame>
            <second_frame>  *  Q  *  G  *  R  L  A  S  R  V  Q  Q  R  K  K  S  S  C  S  *  K  :  V  G  G  N  F  V  *  T  R  S  F  R  S  Q  G  P  R  K  S  R  S  Y  S  K  Y  A  W  I  A  S  S  C  A  S  K  F  *  C  C  C  *   : G  L  A  I  F  I  H  *  I  W  S  I  P  V  Y  L  *  L  L  E  G  *   : A  G  A  V  A  E  A  F  S  S  A  F  A   : A  A  S  T  S  *  R  H  E  S  L  *  C  I  *  A  K  G  E  G  P  Q  T  S  Y  K  K   : D  A  K  E  G  K  Q  C  T  V  I  *  K  A  S  P   : G  *  A  Q  P  *  P  S  K  D  H  S  *  G  S  H  Q   : E  R  G  E  E  A  R  G  Y  *  *  *  D  *  P  P  E  T  S  N  E  T  Q   : E  *  N  *  A  F  C  G  C  L  Y  S  A  *  I  S  F  L  P  K  *  G  W  F  K  *  G  R  I  C  R  L  *  *  S  F  Y  *  S  S  A  Y  S  T  K  H  Y  L  P  G  P  E  A  G  D  C  F  S  *  N  H  E  A  R  V  Q  A  K  K  C  V  P  W  M  A  L  *  I   : G  S  K  *  A  N  S  A  V  Y  E  T  S  G  S  S  Q  I  V  S  C  R  H  Y  T  S  R  F  S  N  T  K  W  P  T  C  S  H  I  *  L  S  W  K  D  G  A  R  W  S  Y  R  V  *  *  M  E  S  T  Q  P  Y  T  H  G  L  R  *  Y  F  I  C  S  T  E  G  S  T  F  C  T  S  M  T  *  S  A  L  H  E  L  V  S  Q  S  P  *  K  L  Y  M  L  Y  D  I  C  M  D  D  A  K  D  G  R  G  N  F  E  P  V  I  I  E  E  P  S  P  G  D  A  R  T  D  C  *  R  Q  M  S  *  N  E  C  L  E  H  R  F  A  S  C  L  C  F  W  </second_frame>
            <third_frame>   D  N  E  D  E  D  W  L  Q  E  F  N  R  E  R  K  V  L  A  A  E  K :   L  E  A  I  L  Y  K  L  E  V  L  D  H  K  A  R  E  R  A  G  V  I  A  N  T  L  G  S  P  V  P  V  L  L  S  F  D  A  A  V  E  :  A  L  Q  S  L  S  I  K  Y  G  V  F  Q  S  I  Y  N  Y  W  K  D  K  :  R  E  R  L  Q  K  P  S  L  R  R  L  Q  :  P  P  P  P  V  N  D  T  N  P  Y  N  V  F  R  P  R  E  K  A  H  R  L  H  T  R  R  :  M  Q  R  R  E  N  N  A  Q  S  F  E  K  L  R  Q  :  V  R  R  N  L  D  Q  A  K  I  I  L  E  A  L  I  K  :  R  E  E  K  K  R  E  V  I  D  S  E  I  S  L  Q  R  L  Q  M  K  H  K  :  N  E  T  E  L  F  V  D  A  F  T  L  P  E  F  P  S  F  P  S  K  V  G  S  S  E  D  E  F  V  D  S  D  D  P  S  T  S  R  R  H  I  A  Q  N  I  T  F  P  D  P  K  L  V  T  A  S  P  R  I  M  K  R  E  F  K  R  R  N  V  S  H  G  W  L  Y  K  L  :  D  P  N  E  P  T  L  L  F  T  K  P  L  D  P  A  K  L  S  A  A  G  I  I  P  P  G  S  P  T  P  N  G  L  P  A  H  T  F  S  F  R  G  R  M  G  R  G  G  R  I  V  F  D  R  W  N  P  L  S  H  T  P  M  D  C  G  D  T  L  Y  V  P  P  K  A  R  H  S  A  H  Q  *  H  D  Q  H  F  M  S  L  F  L  N  P  L  E  S  C  I  C  C  M  I  F  A  W  M  M  L  K  M  E  G  E  I  L  N  Q  *  *  L  K  N  Q  V  L  E  M  H  V  P  I  V  E  G  K  C  H  K  M  N  A  *  S  I  V  L  P  P  V  Y  V  F  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7950" stop="8014"/>
                    <exon start="9678" stop="9801"/>
                    <exon start="10379" stop="10444"/>
                    <exon start="11384" stop="11422"/>
                    <exon start="12206" stop="12286"/>
                    <exon start="12406" stop="12453"/>
                    <exon start="13140" stop="13190"/>
                    <exon start="13355" stop="13423"/>
                    <exon start="13968" stop="14201"/>
                    <exon start="14369" stop="14617"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1023</number_coding_nucleotides>
                  <number_encoded_amino_acids>341</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DNEDEDWLQEFNRERKVLAAEKLEAILYKLEVLDHKARERAGVIANTLGSPVPVLLSFDAAVEALQSLSIKYGVFQSIYNYWKDKRERLQKPSLRRLQPPPPVNDTNPYNVFRPREKAHRLHTRRMQRRENNAQSFEKLRQVRRNLDQAKIILEALIKREEKKREVIDSEISLQRLQMKHKNETELFVDAFTLPEFPSFPSKVGSSEDEFVDSDDPSTSRRHIAQNITFPDPKLVTASPRIMKREFKRRNVSHGWLYKLDPNEPTLLFTKPLDPAKLSAAGIIPPGSPTPNGLPAHTFSFRGRMGRGGRIVFDRWNPLSHTPMDCGDTLYVPPKARHSAHQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="13364" e_stop="13956"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13364" e_stop="13956" e_length="593"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13364" stop="13956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267200" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAAGCGAGAGGTTATTGATAGTGAGATTAGCCTCCAGAGACTTCAAATGAAACACAAGGTATGCGAGGAGGGTTACTATCTAGTCTATCCTCTTCGTTTTTTCACCATTTTTACTATATGATACTTATCAGCAGTAATAGTAGTATCATTAGATAATATTCTCTCTTATTCTGTCTCGACTGGGAAATAGATTATCTACTTTCTGTTTTATTGTGATTGCATTTAAGATTGACAAATTGAGGTTTTACTAGAATCTTAAATGCAGCTCCGGAGCAATTTCTAATTGCTGTGCTGAAAAGAAATTCAGCTGCCGACTAAAAGTTGGTTTACGGAATAGAGTGATAGTAGTTTTTTTCTTTAAAAAAATAAATGGAAAAACTAGTAGGTTGGAGAGGGAATAGCTCTTTATTGCAATAGATAACTTAAATGTGGGTGCAGATTTTCCTTGTCAAAAATGTCCTGCTTAGTCATATTACAATATCATTAGGCCTTTTCAAGTACCAAATGTAACTGGTTATTCTCCTCAGGGTCAGGGCTGTGTTTTCGGGTTATTCATTTTGAATGTTACATGAATTAATTAATCTACTTTTC</gDNA_template>
            <first_frame> K  K  R  E  V  I  D  S  E  I  S  L  Q  R  L  Q  M  K  H  K  V  C  E  E  G  Y  Y  L  V  Y  P  L  R  F  F  T  I  F  T  I  *  Y  L  S  A  V  I  V  V  S  L  D  N  I  L  S  Y  S  V  S  T  G  K  *  I  I  Y  F  L  F  Y  C  D  C  I  *  D  *  Q  I  E  V  L  L  E  S  *  M  Q  L  R  S  N  F  *  L  L  C  *  K  E  I  Q  L  P  T  K  S  W  F  T  E  *  S  D  S  S  F  F  L  *  K  N  K  W  K  N  *  *  V  G  E  G  I  A  L  Y  C  N  R  *  L  K  C  G  C  R  F  S  L  S  K  M  S  C  L  V  I  L  Q  Y  H  *  A  F  S  S  T  K  C  N  W  L  F  S  S  G  S  G  L  C  F  R  V  I  H  F  E  C  Y  M  N  *  L  I  Y  F   </first_frame>
            <second_frame>  R  S  E  R  L  L  I  V  R  L  A  S  R  D  F  K  *  N  T  R  Y  A  R  R  V  T  I  *  S  I  L  F  V  F  S  P  F  L  L  Y  D  T  Y  Q  Q  *  *  *  Y  H  *  I  I  F  S  L  I  L  S  R  L  G  N  R  L  S  T  F  C  F  I  V  I  A  F  K  I  D  K  L  R  F  Y  *  N  L  K  C  S  S  G  A  I  S  N  C  C  A  E  K  K  F  S  C  R  L  K  V  G  L  R  N  R  V  I  V  V  F  F  F  K  K  I  N  G  K  T  S  R  L  E  R  E  *  L  F  I  A  I  D  N  L  N  V  G  A  D  F  P  C  Q  K  C  P  A  *  S  Y  Y  N  I  I  R  P  F  Q  V  P  N  V  T  G  Y  S  P  Q  G  Q  G  C  V  F  G  L  F  I  L  N  V  T  *  I  N  *  S  T  F  </second_frame>
            <third_frame>   E  A  R  G  Y  *  *  *  D  *  P  P  E  T  S  N  E  T  Q  G  M  R  G  G  L  L  S  S  L  S  S  S  F  F  H  H  F  Y  Y  M  I  L  I  S  S  N  S  S  I  I  R  *  Y  S  L  L  F  C  L  D  W  E  I  D  Y  L  L  S  V  L  L  *  L  H  L  R  L  T  N  *  G  F  T  R  I  L  N  A  A  P  E  Q  F  L  I  A  V  L  K  R  N  S  A  A  D  *  K  L  V  Y  G  I  E  *  *  *  F  F  S  L  K  K  *  M  E  K  L  V  G  W  R  G  N  S  S  L  L  Q  *  I  T  *  M  W  V  Q  I  F  L  V  K  N  V  L  L  S  H  I  T  I  S  L  G  L  F  K  Y  Q  M  *  L  V  I  L  L  R  V  R  A  V  F  S  G  Y  S  F  *  M  L  H  E  L  I  N  L  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0075D08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="15504" PGL_stop="22382"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15504" e_stop="16128"/>
            <exon e_start="21187" e_stop="21245"/>
            <exon e_start="21348" e_stop="21487"/>
            <exon e_start="21918" e_stop="22350"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.469" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15504" e_stop="16128" e_length="625"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="16129" i_stop="21186" i_length="5058"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21187" e_stop="21245" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.469" acc_prob="0.962">
            <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21348" e_stop="21487" e_length="140"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="21918" e_stop="22350" e_length="433"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="16128"/>
              <exon start="21187" stop="21245"/>
              <exon start="21348" stop="21389"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="15936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15513" stop="16046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15514" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15518" stop="16083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15527" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15540" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15565" stop="16076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16061" stop="16128"/>
              <exon start="21187" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372111" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21395" stop="21487"/>
              <exon start="21918" stop="22280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203299" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAG : TTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG : GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG : GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCAC</gDNA_template>
            <first_frame> T  K  T  L  K  T  P  L  S  I  L  Q  F  L  Q  H  L  L  L  N  S  S  I  K  Q  V  Q  K  L  I  L  G  S  *  N  L  H  V  F  L  A  F  G  F  C  I  S  S  E  L  K  D  L  *  N  L  D  M  K  A  L  R  V  L  R  T  L  N  S  S  L  S  S  N  P  S  K  T  H  F  N  S  T  I  F  L  R  F  Y  S  A  Q  P  Q  E  D  H  P  T  S  T  G  V  S  S  S  E  E  E  D  T  S  S  S  V  F  D  S  S  Q  Y  D  V  G  V  G  L  N  N  D  V  N  S  E  R  S  V  S  S  T  W  D  E  K  Y  R  E  R  V  K  T  K  V  F  G  E  D  P  S  E  I  K  S  S  R  I  L  I  K  E  E  E  K  R  R  R  A  A  L  L  A  R  T  L  L  E  A  A  L  D  R  P  D  E  E  G  D  E  D  K  E  D  E  L  V  K  E  E   : V  M  K  N  I  S  M  E  V  V  R  E  K  L  L  H  Y  I  H  Q  :  E  I  P  Y  G  I  D  H  R  L  M  D  W  K  E  L  R  D  G  S  L  R  I  E  H  H  L  I  T  H  K  I  S  Q  R  K  I  L  V  G  K  N  G  S  K  I  G :   R  I  G  I  E  A  N  E  E  L  R  T  I  F  K  R  N  V  H  L  M  L  M  V  R  V  K  S  *  R  *  K  T  I  S  L  F  C  M  C  V  Y  I  D  V  L  Q  F  L  S  L  T  K  A  V  L  S  *  H  N  N  L  P  K  H  *  S  K  I  I  L  L  *  Y  K  I  W  K  R  S  L  I  S  L  Y  M  *  I  H  S  Y  S  F  P  *  I  *  G  Q  N  S  R  H  C  L  Y  S  C  W  D  Q  L  F  V  M  L  V  H  L  H  *  Y  I  *  T  F  S  C  S  I  S  S  S  K  Q  C  T  F  *  L  F  H  C  H </first_frame>
            <second_frame>  L  K  P  S  K  P  L  C  P  F  Y  S  S  Y  S  I  S  F  S  I  A  V  *  S  K  C  K  S  *  F  W  V  L  K  I  C  M  F  F  L  H  L  D  F  A  *  A  Q  S  *  K  I  C  E  I  L  I  *  K  L  *  E  F  *  G  H  *  T  H  H  Y  L  Q  I  Q  A  K  P  I  S  I  Q  P  F  S  F  D  F  T  Q  P  N  L  K  K  T  T  P  Q  A  L  V  F  L  P  L  K  K  R  T  R  L  P  Q  S  S  T  V  R  N  T  M  W  V  W  D  *  T  M  M  L  I  Q  K  E  V  *  A  P  L  G  T  R  N  I  G  K  E  *  K  L  K  S  L  V  K  T  L  P  R  L  R  V  Q  E  S  *  L  K  K  R  R  R  E  E  E  L  L  Y  W  L  G  L  F  *  K  L  H  W  T  G  L  M  R  K  G  T  K  I  K  R  M  S  W  *  R  K  K  :  L  *  R  I  F  Q  W  R  *  S  G  K  S  C  Y  I  T  Y  I  R :   K  S  H  M  A  L  T  I  A  *  W  T  G  R  S  Y  V  M  V  P  *  E  L  N  T  I  *  S  H  T  R  *  A  N  A  R  F  S  *  E  R  M  V  P  K  *   : G  E  *  V  S  R  Q  M  K  S  *  E  R  Y  S  R  E  M  S  I  *  C  L  W  L  E  *  N  H  E  D  E  R  Q  Y  P  C  F  A  C  V  Y  I  *  M  C  S  S  F  C  P  L  P  K  Q  F  S  V  D  T  I  I  Y  Q  S  I  N  P  K  L  Y  C  Y  D  T  K  Y  G  R  E  A  *  F  P  F  T  C  E  Y  T  H  I  L  F  H  R  F  K  V  K  I  L  D  I  V  C  I  H  V  G  I  N  C  L  *  C  W  F  I  C  I  D  I  F  E  P  S  V  A  P  F  P  H  L  N  N  V  L  F  D  C  S  I  A   </second_frame>
            <third_frame>   *  N  P  Q  N  P  F  V  H  F  T  V  L  T  A  S  P  S  Q  *  Q  Y  K  A  S  A  K  A  D  S  G  F  L  K  S  A  C  F  S  C  I  W  I  L  H  K  L  R  V  E  R  F  V  K  S  *  Y  E  S  F  K  S  F  E  D  I  E  L  I  T  I  F  K  S  K  Q  N  P  F  Q  F  N  H  F  P  S  I  L  L  S  P  T  S  R  R  P  P  H  K  H  W  C  F  F  L  *  R  R  G  H  V  F  L  S  L  R  Q  F  A  I  R  C  G  C  G  I  K  Q  *  C  *  F  R  K  K  C  K  L  H  L  G  R  E  I  *  G  K  S  E  N  *  S  L  W  *  R  P  F  R  D  *  E  F  K  N  L  D  *  R  R  G  E  E  K  K  S  C  F  I  G  *  D  S  S  R  S  C  T  G  P  A  *  *  G  R  G  R  R  *  R  G  *  V  G  E  G  R  S :   Y  E  E  Y  F  N  G  G  S  Q  G  K  V  A  T  L  H  T  S   : G  N  P  I  W  H  *  P  S  P  D  G  L  E  G  V  T  *  W  F  P  E  N  *  T  P  F  D  H  T  Q  D  K  P  T  Q  D  S  R  R  K  E  W  F  Q  N  R  :  E  N  R  Y  R  G  K  *  R  V  E  N  D  I  Q  E  K  C  P  S  N  A  Y  G  *  S  E  I  M  K  M  K  D  N  I  L  V  L  H  V  C  I  Y  R  C  A  P  V  F  V  P  Y  Q  S  S  S  Q  L  T  Q  *  F  T  K  A  L  I  Q  N  Y  I  V  M  I  Q  N  M  E  E  K  L  D  F  P  L  H  V  N  T  L  I  F  F  S  I  D  L  R  S  K  F  *  T  L  F  V  F  M  L  G  S  I  V  C  N  V  G  S  F  A  L  I  Y  L  N  L  Q  L  L  H  F  L  I  *  T  M  Y  F  L  I  V  P  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15666" stop="16128"/>
                    <exon start="21187" stop="21245"/>
                    <exon start="21348" stop="21487"/>
                    <exon start="21918" stop="22005"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLDMKALRVLRTLNSSLSSNPSKTHFNSTIFLRFYSAQPQEDHPTSTGVSSSEEEDTSSSVFDSSQYDVGVGLNNDVNSERSVSSTWDEKYRERVKTKVFGEDPSEIKSSRILIKEEEKRRRAALLARTLLEAALDRPDEEGDEDKEDELVKEEVMKNISMEVVREKLLHYIHQEIPYGIDHRLMDWKELRDGSLRIEHHLITHKISQRKILVGKNGSKIGRIGIEANEELRTIFKRNVHLMLMVRVKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15504" e_stop="16128"/>
            <exon e_start="16671" e_stop="16707"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.714"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15504" e_stop="16128" e_length="625"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="16129" i_stop="16670" i_length="542"/>
          </intron>
          <exon e_serial="2" e_score="0.714">
            <gDNA_exon_boundary e_start="16671" e_stop="16707" e_length="37"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="16128"/>
              <exon start="16671" stop="16707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="16128"/>
              <exon start="16671" stop="16698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372201" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="15936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15513" stop="16046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15514" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15518" stop="16083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15527" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15540" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15565" stop="16076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAG : TGATGACTAATTTGTCAATAGTGGTGGTTAGTGATCA</gDNA_template>
            <first_frame> T  K  T  L  K  T  P  L  S  I  L  Q  F  L  Q  H  L  L  L  N  S  S  I  K  Q  V  Q  K  L  I  L  G  S  *  N  L  H  V  F  L  A  F  G  F  C  I  S  S  E  L  K  D  L  *  N  L  D  M  K  A  L  R  V  L  R  T  L  N  S  S  L  S  S  N  P  S  K  T  H  F  N  S  T  I  F  L  R  F  Y  S  A  Q  P  Q  E  D  H  P  T  S  T  G  V  S  S  S  E  E  E  D  T  S  S  S  V  F  D  S  S  Q  Y  D  V  G  V  G  L  N  N  D  V  N  S  E  R  S  V  S  S  T  W  D  E  K  Y  R  E  R  V  K  T  K  V  F  G  E  D  P  S  E  I  K  S  S  R  I  L  I  K  E  E  E  K  R  R  R  A  A  L  L  A  R  T  L  L  E  A  A  L  D  R  P  D  E  E  G  D  E  D  K  E  D  E  L  V  K  E  E   : V  M  T  N  L  S  I  V  V  V  S  D   </first_frame>
            <second_frame>  L  K  P  S  K  P  L  C  P  F  Y  S  S  Y  S  I  S  F  S  I  A  V  *  S  K  C  K  S  *  F  W  V  L  K  I  C  M  F  F  L  H  L  D  F  A  *  A  Q  S  *  K  I  C  E  I  L  I  *  K  L  *  E  F  *  G  H  *  T  H  H  Y  L  Q  I  Q  A  K  P  I  S  I  Q  P  F  S  F  D  F  T  Q  P  N  L  K  K  T  T  P  Q  A  L  V  F  L  P  L  K  K  R  T  R  L  P  Q  S  S  T  V  R  N  T  M  W  V  W  D  *  T  M  M  L  I  Q  K  E  V  *  A  P  L  G  T  R  N  I  G  K  E  *  K  L  K  S  L  V  K  T  L  P  R  L  R  V  Q  E  S  *  L  K  K  R  R  R  E  E  E  L  L  Y  W  L  G  L  F  *  K  L  H  W  T  G  L  M  R  K  G  T  K  I  K  R  M  S  W  *  R  K  K  :  *  *  L  I  C  Q  *  W  W  L  V  I  </second_frame>
            <third_frame>   *  N  P  Q  N  P  F  V  H  F  T  V  L  T  A  S  P  S  Q  *  Q  Y  K  A  S  A  K  A  D  S  G  F  L  K  S  A  C  F  S  C  I  W  I  L  H  K  L  R  V  E  R  F  V  K  S  *  Y  E  S  F  K  S  F  E  D  I  E  L  I  T  I  F  K  S  K  Q  N  P  F  Q  F  N  H  F  P  S  I  L  L  S  P  T  S  R  R  P  P  H  K  H  W  C  F  F  L  *  R  R  G  H  V  F  L  S  L  R  Q  F  A  I  R  C  G  C  G  I  K  Q  *  C  *  F  R  K  K  C  K  L  H  L  G  R  E  I  *  G  K  S  E  N  *  S  L  W  *  R  P  F  R  D  *  E  F  K  N  L  D  *  R  R  G  E  E  K  K  S  C  F  I  G  *  D  S  S  R  S  C  T  G  P  A  *  *  G  R  G  R  R  *  R  G  *  V  G  E  G  R  S :   D  D  *  F  V  N  S  G  G  *  *  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15666" stop="16128"/>
                    <exon start="16671" stop="16705"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>498</number_coding_nucleotides>
                  <number_encoded_amino_acids>166</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLDMKALRVLRTLNSSLSSNPSKTHFNSTIFLRFYSAQPQEDHPTSTGVSSSEEEDTSSSVFDSSQYDVGVGLNNDVNSERSVSSTWDEKYRERVKTKVFGEDPSEIKSSRILIKEEEKRRRAALLARTLLEAALDRPDEEGDEDKEDELVKEEVMTNLSIVVVSD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="15504" e_stop="16212"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="15504" e_stop="16212" e_length="709"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="15936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15513" stop="16046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15514" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15518" stop="16083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15527" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206246" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15540" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15558" stop="16212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15565" stop="16076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTAAAACCCTCAAAACCCCTTTGTCCATTTTACAGTTCTTACAGCATCTCCTTCTCAATAGCAGTATAAAGCAAGTGCAAAAGCTGATTCTGGGTTCTTAAAATCTGCATGTTTTTCTTGCATTTGGATTTTGCATAAGCTCAGAGTTGAAAGATTTGTGAAATCTTGATATGAAAGCTTTAAGAGTTTTGAGGACATTGAACTCATCACTATCTTCAAATCCAAGCAAAACCCATTTCAATTCAACCATTTTCCTTCGATTTTACTCAGCCCAACCTCAAGAAGACCACCCCACAAGCACTGGTGTTTCTTCCTCTGAAGAAGAGGACACGTCTTCCTCAGTCTTCGACAGTTCGCAATACGATGTGGGTGTGGGATTAAACAATGATGTTAATTCAGAAAGAAGTGTAAGCTCCACTTGGGACGAGAAATATAGGGAAAGAGTGAAAACTAAAGTCTTTGGTGAAGACCCTTCCGAGATTAAGAGTTCAAGAATCTTGATTAAAGAAGAGGAGAAGAGAAGAAGAGCTGCTTTATTGGCTAGGACTCTTCTAGAAGCTGCACTGGACCGGCCTGATGAGGAAGGGGACGAAGATAAAGAGGATGAGTTGGTGAAGGAAGAAGATCAAATGTCATTGAGTGTGGGAATTATTGGAGCTCCTAATGCTGGGAAATCTTCATTGACTAATTACATGGTTGGTGGATCTC</gDNA_template>
            <first_frame> T  K  T  L  K  T  P  L  S  I  L  Q  F  L  Q  H  L  L  L  N  S  S  I  K  Q  V  Q  K  L  I  L  G  S  *  N  L  H  V  F  L  A  F  G  F  C  I  S  S  E  L  K  D  L  *  N  L  D  M  K  A  L  R  V  L  R  T  L  N  S  S  L  S  S  N  P  S  K  T  H  F  N  S  T  I  F  L  R  F  Y  S  A  Q  P  Q  E  D  H  P  T  S  T  G  V  S  S  S  E  E  E  D  T  S  S  S  V  F  D  S  S  Q  Y  D  V  G  V  G  L  N  N  D  V  N  S  E  R  S  V  S  S  T  W  D  E  K  Y  R  E  R  V  K  T  K  V  F  G  E  D  P  S  E  I  K  S  S  R  I  L  I  K  E  E  E  K  R  R  R  A  A  L  L  A  R  T  L  L  E  A  A  L  D  R  P  D  E  E  G  D  E  D  K  E  D  E  L  V  K  E  E  D  Q  M  S  L  S  V  G  I  I  G  A  P  N  A  G  K  S  S  L  T  N  Y  M  V  G  G  S  </first_frame>
            <second_frame>  L  K  P  S  K  P  L  C  P  F  Y  S  S  Y  S  I  S  F  S  I  A  V  *  S  K  C  K  S  *  F  W  V  L  K  I  C  M  F  F  L  H  L  D  F  A  *  A  Q  S  *  K  I  C  E  I  L  I  *  K  L  *  E  F  *  G  H  *  T  H  H  Y  L  Q  I  Q  A  K  P  I  S  I  Q  P  F  S  F  D  F  T  Q  P  N  L  K  K  T  T  P  Q  A  L  V  F  L  P  L  K  K  R  T  R  L  P  Q  S  S  T  V  R  N  T  M  W  V  W  D  *  T  M  M  L  I  Q  K  E  V  *  A  P  L  G  T  R  N  I  G  K  E  *  K  L  K  S  L  V  K  T  L  P  R  L  R  V  Q  E  S  *  L  K  K  R  R  R  E  E  E  L  L  Y  W  L  G  L  F  *  K  L  H  W  T  G  L  M  R  K  G  T  K  I  K  R  M  S  W  *  R  K  K  I  K  C  H  *  V  W  E  L  L  E  L  L  M  L  G  N  L  H  *  L  I  T  W  L  V  D  L </second_frame>
            <third_frame>   *  N  P  Q  N  P  F  V  H  F  T  V  L  T  A  S  P  S  Q  *  Q  Y  K  A  S  A  K  A  D  S  G  F  L  K  S  A  C  F  S  C  I  W  I  L  H  K  L  R  V  E  R  F  V  K  S  *  Y  E  S  F  K  S  F  E  D  I  E  L  I  T  I  F  K  S  K  Q  N  P  F  Q  F  N  H  F  P  S  I  L  L  S  P  T  S  R  R  P  P  H  K  H  W  C  F  F  L  *  R  R  G  H  V  F  L  S  L  R  Q  F  A  I  R  C  G  C  G  I  K  Q  *  C  *  F  R  K  K  C  K  L  H  L  G  R  E  I  *  G  K  S  E  N  *  S  L  W  *  R  P  F  R  D  *  E  F  K  N  L  D  *  R  R  G  E  E  K  K  S  C  F  I  G  *  D  S  S  R  S  C  T  G  P  A  *  *  G  R  G  R  R  *  R  G  *  V  G  E  G  R  R  S  N  V  I  E  C  G  N  Y  W  S  S  *  C  W  E  I  F  I  D  *  L  H  G  W  W  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15666" stop="16211"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLDMKALRVLRTLNSSLSSNPSKTHFNSTIFLRFYSAQPQEDHPTSTGVSSSEEEDTSSSVFDSSQYDVGVGLNNDVNSERSVSSTWDEKYRERVKTKVFGEDPSEIKSSRILIKEEEKRRRAALLARTLLEAALDRPDEEGDEDKEDELVKEEDQMSLSVGIIGAPNAGKSSLTNYMVGGS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="20132" e_stop="20469"/>
            <exon e_start="20556" e_stop="20622"/>
            <exon e_start="21142" e_stop="21245"/>
            <exon e_start="21348" e_stop="21487"/>
            <exon e_start="21918" e_stop="22382"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.822" e_score="1.000"/>
          <exon-intron don_prob="0.469" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20132" e_stop="20469" e_length="338"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20470" i_stop="20555" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20556" e_stop="20622" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.822">
            <gDNA_intron_boundary i_start="20623" i_stop="21141" i_length="519"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21142" e_stop="21245" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.469" acc_prob="0.962">
            <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="21348" e_stop="21487" e_length="140"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21918" e_stop="22382" e_length="465"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20132" stop="20469"/>
              <exon start="20556" stop="20622"/>
              <exon start="21142" stop="21245"/>
              <exon start="21348" stop="21432"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20132" stop="20469"/>
              <exon start="20556" stop="20622"/>
              <exon start="21142" stop="21181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21165" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21184" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21185" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21395" stop="21487"/>
              <exon start="21918" stop="22280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203299" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCTCTGTTCAGTGAAGATAGGTATCGGTTTCCATGTTTAAAATGAAGTAAACTTATCGAGAAAAAAGTATTGTAGAGAGGACTGGAGGATGCACATATAACTGCATCTTATAGCAACTAAGTAGATTCATCTGAATTTTGCTGGCATTATTTCTTCTGTCTAATTTTTTGATATATAGGCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAG : GTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAG : TGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG : GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG : GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCACATTTTCCCATCTAACCTATGTGCTTCTGTTCT</gDNA_template>
            <first_frame> S  S  V  Q  *  R  *  V  S  V  S  M  F  K  M  K  *  T  Y  R  E  K  S  I  V  E  R  T  G  G  C  T  Y  N  C  I  L  *  Q  L  S  R  F  I  *  I  L  L  A  L  F  L  L  S  N  F  L  I  Y  R  P  D  S  R  V  V  R  L  I  E  R  M  G  S  E  A  N  P  N  Q  K  R  L  L  C  I  N  K  V  D  L  I  E  K  K  K  D  L  L  K  V  V  E  E  F  K  D  L  P  G  Y  E  R :   C  F  T  V  S  G  L  K  G  A  G  V  K  D  L  T  K  Y  L  M  E  Q  :  *  K  D  R  G  M  K  I  H  L  S  *  V  K  K  L  *  R  I  F  Q  W  R  *  S  G  K  S  C  Y  I  T  Y  I  R :   K  S  H  M  A  L  T  I  A  *  W  T  G  R  S  Y  V  M  V  P  *  E  L  N  T  I  *  S  H  T  R  *  A  N  A  R  F  S  *  E  R  M  V  P  K  *   : G  E  *  V  S  R  Q  M  K  S  *  E  R  Y  S  R  E  M  S  I  *  C  L  W  L  E  *  N  H  E  D  E  R  Q  Y  P  C  F  A  C  V  Y  I  *  M  C  S  S  F  C  P  L  P  K  Q  F  S  V  D  T  I  I  Y  Q  S  I  N  P  K  L  Y  C  Y  D  T  K  Y  G  R  E  A  *  F  P  F  T  C  E  Y  T  H  I  L  F  H  R  F  K  V  K  I  L  D  I  V  C  I  H  V  G  I  N  C  L  *  C  W  F  I  C  I  D  I  F  E  P  S  V  A  P  F  P  H  L  N  N  V  L  F  D  C  S  I  A  T  F  S  H  L  T  Y  V  L  L  F  </first_frame>
            <second_frame>  A  L  F  S  E  D  R  Y  R  F  P  C  L  K  *  S  K  L  I  E  K  K  V  L  *  R  G  L  E  D  A  H  I  T  A  S  Y  S  N  *  V  D  S  S  E  F  C  W  H  Y  F  F  C  L  I  F  *  Y  I  G  L  I  L  E  W  *  G  *  L  R  E  W  A  L  R  L  I  Q  I  R  N  A  Y  C  A  S  I  K  L  T  *  S  R  K  R  K  T  C  *  K  L  L  R  N  S  K  T  F  L  D  M  K   : G  A  L  R  Y  P  D  *  R  A  L  E  *  K  I  *  L  N  T  *  W  S  S :   E  K  T  V  G  *  R  S  I  C  H  E  *  R  S  Y  E  E  Y  F  N  G  G  S  Q  G  K  V  A  T  L  H  T  S   : G  N  P  I  W  H  *  P  S  P  D  G  L  E  G  V  T  *  W  F  P  E  N  *  T  P  F  D  H  T  Q  D  K  P  T  Q  D  S  R  R  K  E  W  F  Q  N  R  :  E  N  R  Y  R  G  K  *  R  V  E  N  D  I  Q  E  K  C  P  S  N  A  Y  G  *  S  E  I  M  K  M  K  D  N  I  L  V  L  H  V  C  I  Y  R  C  A  P  V  F  V  P  Y  Q  S  S  S  Q  L  T  Q  *  F  T  K  A  L  I  Q  N  Y  I  V  M  I  Q  N  M  E  E  K  L  D  F  P  L  H  V  N  T  L  I  F  F  S  I  D  L  R  S  K  F  *  T  L  F  V  F  M  L  G  S  I  V  C  N  V  G  S  F  A  L  I  Y  L  N  L  Q  L  L  H  F  L  I  *  T  M  Y  F  L  I  V  P  L  P  H  F  P  I  *  P  M  C  F  C  S </second_frame>
            <third_frame>   L  C  S  V  K  I  G  I  G  F  H  V  *  N  E  V  N  L  S  R  K  K  Y  C  R  E  D  W  R  M  H  I  *  L  H  L  I  A  T  K  *  I  H  L  N  F  A  G  I  I  S  S  V  *  F  F  D  I  *  A  *  F  S  S  G  E  V  D  *  E  N  G  L  *  G  *  S  K  S  E  T  L  T  V  H  Q  *  S  *  P  N  R  E  K  E  R  L  V  E  S  C  *  G  I  Q  R  P  S  W  I  *  K  :  V  L  Y  G  I  R  T  K  G  R  W  S  E  R  S  N  *  I  L  D  G  A   : V  K  R  P  W  D  E  D  P  F  V  M  S  E  E  V  M  K  N  I  S  M  E  V  V  R  E  K  L  L  H  Y  I  H  Q  :  E  I  P  Y  G  I  D  H  R  L  M  D  W  K  E  L  R  D  G  S  L  R  I  E  H  H  L  I  T  H  K  I  S  Q  R  K  I  L  V  G  K  N  G  S  K  I  G :   R  I  G  I  E  A  N  E  E  L  R  T  I  F  K  R  N  V  H  L  M  L  M  V  R  V  K  S  *  R  *  K  T  I  S  L  F  C  M  C  V  Y  I  D  V  L  Q  F  L  S  L  T  K  A  V  L  S  *  H  N  N  L  P  K  H  *  S  K  I  I  L  L  *  Y  K  I  W  K  R  S  L  I  S  L  Y  M  *  I  H  S  Y  S  F  P  *  I  *  G  Q  N  S  R  H  C  L  Y  S  C  W  D  Q  L  F  V  M  L  V  H  L  H  *  Y  I  *  T  F  S  C  S  I  S  S  S  K  Q  C  T  F  *  L  F  H  C  H  I  F  P  S  N  L  C  A  S  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20607" stop="20622"/>
                    <exon start="21142" stop="21245"/>
                    <exon start="21348" stop="21487"/>
                    <exon start="21918" stop="22005"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILDGAVKRPWDEDPFVMSEEVMKNISMEVVREKLLHYIHQEIPYGIDHRLMDWKELRDGSLRIEHHLITHKISQRKILVGKNGSKIGRIGIEANEELRTIFKRNVHLMLMVRVKS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20267" stop="20469"/>
                    <exon start="20556" stop="20622"/>
                    <exon start="21142" stop="21144"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLALFLLSNFLIYRPDSRVVRLIERMGSEANPNQKRLLCINKVDLIEKKKDLLKVVEEFKDLPGYERCFTVSGLKGAGVKDLTKYLMEQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="17021" e_stop="17088"/>
            <exon e_start="18168" e_stop="18313"/>
            <exon e_start="20311" e_stop="20469"/>
            <exon e_start="20556" e_stop="20622"/>
            <exon e_start="21138" e_stop="21245"/>
            <exon e_start="21348" e_stop="21487"/>
            <exon e_start="21918" e_stop="22382"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.889" acc_prob="0.658" e_score="0.985"/>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.469" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="17021" e_stop="17088" e_length="68"/>
          </exon>
          <intron i_serial="1" don_prob="0.889" acc_prob="0.658">
            <gDNA_intron_boundary i_start="17089" i_stop="18167" i_length="1079"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18168" e_stop="18313" e_length="146"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18314" i_stop="20310" i_length="1997"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20311" e_stop="20469" e_length="159"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20470" i_stop="20555" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="20556" e_stop="20622" e_length="67"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.991">
            <gDNA_intron_boundary i_start="20623" i_stop="21137" i_length="515"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21138" e_stop="21245" e_length="108"/>
          </exon>
          <intron i_serial="5" don_prob="0.469" acc_prob="0.962">
            <gDNA_intron_boundary i_start="21246" i_stop="21347" i_length="102"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="21348" e_stop="21487" e_length="140"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="21488" i_stop="21917" i_length="430"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="21918" e_stop="22382" e_length="465"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17021" stop="17088"/>
              <exon start="18168" stop="18313"/>
              <exon start="20311" stop="20353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18259" stop="18313"/>
              <exon start="20311" stop="20469"/>
              <exon start="20556" stop="20622"/>
              <exon start="21138" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21165" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21184" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21185" stop="21245"/>
              <exon start="21348" stop="21487"/>
              <exon start="21918" stop="22350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21395" stop="21487"/>
              <exon start="21918" stop="22280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203299" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATCACGGAAGACAAATACCACTACTCATGAAGTCTTAGGTGTGATGACTAAAGGGAAAACACAAATT : TGTTTCTTTGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAA : GCCTGATTCTCGAGTGGTGAGGTTGATTGAGAGAATGGGCTCTGAGGCTAATCCAAATCAGAAACGCTTACTGTGCATCAATAAAGTTGACCTAATCGAGAAAAAGAAAGACTTGTTGAAAGTTGTTGAGGAATTCAAAGACCTTCCTGGATATGAAAG : GTGCTTTACGGTATCCGGACTAAAGGGCGCTGGAGTGAAAGATCTAACTAAATACTTGATGGAGCAG : TCAGTGAAAAGACCGTGGGATGAAGATCCATTTGTCATGAGTGAAGAAGTTATGAAGAATATTTCAATGGAGGTAGTCAGGGAAAAGTTGCTACATTACATACATCAG : GAAATCCCATATGGCATTGACCATCGCCTGATGGACTGGAAGGAGTTACGTGATGGTTCCCTGAGAATTGAACACCATTTGATCACACACAAGATAAGCCAACGCAAGATTCTCGTAGGAAAGAATGGTTCCAAAATAGG : GAGAATAGGTATCGAGGCAAATGAAGAGTTGAGAACGATATTCAAGAGAAATGTCCATCTAATGCTTATGGTTAGAGTGAAATCATGAAGATGAAAGACAATATCCTTGTTTTGCATGTGTGTATATATAGATGTGCTCCAGTTTTTGTCCCTTACCAAAGCAGTTCTCAGTTGACACAATAATTTACCAAAGCATTAATCCAAAATTATATTGTTATGATACAAAATATGGAAGAGAAGCTTGATTTCCCTTTACATGTGAATACACTCATATTCTTTTCCATAGATTTAAGGTCAAAATTCTAGACATTGTTTGTATTCATGTTGGGATCAATTGTTTGTAATGTTGGTTCATTTGCATTGATATATTTGAACCTTCAGTTGCTCCATTTCCTCATCTAAACAATGTACTTTTTGATTGTTCCATTGCCACATTTTCCCATCTAACCTATGTGCTTCTGTTCT</gDNA_template>
            <first_frame> Y  H  G  R  Q  I  P  L  L  M  K  S  *  V  *  *  L  K  G  K  H  K  F :   V  S  L  T  L  P  G  L  C  *  R  K  V  D  F  L  T  K  T  *  K  H  V  L  K  V  H  G  G  L  L  I  Y  M  M  Y  S  L  S  Y  L  M  L  I  G  I  L  P   : S  L  I  L  E  W  *  G  *  L  R  E  W  A  L  R  L  I  Q  I  R  N  A  Y  C  A  S  I  K  L  T  *  S  R  K  R  K  T  C  *  K  L  L  R  N  S  K  T  F  L  D  M  K   : G  A  L  R  Y  P  D  *  R  A  L  E  *  K  I  *  L  N  T  *  W  S  S :   Q  *  K  D  R  G  M  K  I  H  L  S  *  V  K  K  L  *  R  I  F  Q  W  R  *  S  G  K  S  C  Y  I  T  Y  I  R :   K  S  H  M  A  L  T  I  A  *  W  T  G  R  S  Y  V  M  V  P  *  E  L  N  T  I  *  S  H  T  R  *  A  N  A  R  F  S  *  E  R  M  V  P  K  *   : G  E  *  V  S  R  Q  M  K  S  *  E  R  Y  S  R  E  M  S  I  *  C  L  W  L  E  *  N  H  E  D  E  R  Q  Y  P  C  F  A  C  V  Y  I  *  M  C  S  S  F  C  P  L  P  K  Q  F  S  V  D  T  I  I  Y  Q  S  I  N  P  K  L  Y  C  Y  D  T  K  Y  G  R  E  A  *  F  P  F  T  C  E  Y  T  H  I  L  F  H  R  F  K  V  K  I  L  D  I  V  C  I  H  V  G  I  N  C  L  *  C  W  F  I  C  I  D  I  F  E  P  S  V  A  P  F  P  H  L  N  N  V  L  F  D  C  S  I  A  T  F  S  H  L  T  Y  V  L  L  F  </first_frame>
            <second_frame>  I  T  E  D  K  Y  H  Y  S  *  S  L  R  C  D  D  *  R  E  N  T  N   : L  F  L  *  H  S  R  A  Y  A  K  E  K  W  I  S  L  Q  R  H  K  S  T  Y  *  K  C  M  E  V  Y  *  S  I  *  C  T  H  C  H  I  *  C  S  *  A  S  Y  Q  :  A  *  F  S  S  G  E  V  D  *  E  N  G  L  *  G  *  S  K  S  E  T  L  T  V  H  Q  *  S  *  P  N  R  E  K  E  R  L  V  E  S  C  *  G  I  Q  R  P  S  W  I  *  K  :  V  L  Y  G  I  R  T  K  G  R  W  S  E  R  S  N  *  I  L  D  G  A   : V  S  E  K  T  V  G  *  R  S  I  C  H  E  *  R  S  Y  E  E  Y  F  N  G  G  S  Q  G  K  V  A  T  L  H  T  S   : G  N  P  I  W  H  *  P  S  P  D  G  L  E  G  V  T  *  W  F  P  E  N  *  T  P  F  D  H  T  Q  D  K  P  T  Q  D  S  R  R  K  E  W  F  Q  N  R  :  E  N  R  Y  R  G  K  *  R  V  E  N  D  I  Q  E  K  C  P  S  N  A  Y  G  *  S  E  I  M  K  M  K  D  N  I  L  V  L  H  V  C  I  Y  R  C  A  P  V  F  V  P  Y  Q  S  S  S  Q  L  T  Q  *  F  T  K  A  L  I  Q  N  Y  I  V  M  I  Q  N  M  E  E  K  L  D  F  P  L  H  V  N  T  L  I  F  F  S  I  D  L  R  S  K  F  *  T  L  F  V  F  M  L  G  S  I  V  C  N  V  G  S  F  A  L  I  Y  L  N  L  Q  L  L  H  F  L  I  *  T  M  Y  F  L  I  V  P  L  P  H  F  P  I  *  P  M  C  F  C  S </second_frame>
            <third_frame>   S  R  K  T  N  T  T  T  H  E  V  L  G  V  M  T  K  G  K  T  Q  I  :  C  F  F  D  T  P  G  L  M  L  K  K  S  G  F  P  Y  K  D  I  K  A  R  I  E  S  A  W  R  S  I  D  L  Y  D  V  L  I  V  I  F  D  A  H  R  H  L  T  K :   P  D  S  R  V  V  R  L  I  E  R  M  G  S  E  A  N  P  N  Q  K  R  L  L  C  I  N  K  V  D  L  I  E  K  K  K  D  L  L  K  V  V  E  E  F  K  D  L  P  G  Y  E  R :   C  F  T  V  S  G  L  K  G  A  G  V  K  D  L  T  K  Y  L  M  E  Q  :  S  V  K  R  P  W  D  E  D  P  F  V  M  S  E  E  V  M  K  N  I  S  M  E  V  V  R  E  K  L  L  H  Y  I  H  Q  :  E  I  P  Y  G  I  D  H  R  L  M  D  W  K  E  L  R  D  G  S  L  R  I  E  H  H  L  I  T  H  K  I  S  Q  R  K  I  L  V  G  K  N  G  S  K  I  G :   R  I  G  I  E  A  N  E  E  L  R  T  I  F  K  R  N  V  H  L  M  L  M  V  R  V  K  S  *  R  *  K  T  I  S  L  F  C  M  C  V  Y  I  D  V  L  Q  F  L  S  L  T  K  A  V  L  S  *  H  N  N  L  P  K  H  *  S  K  I  I  L  L  *  Y  K  I  W  K  R  S  L  I  S  L  Y  M  *  I  H  S  Y  S  F  P  *  I  *  G  Q  N  S  R  H  C  L  Y  S  C  W  D  Q  L  F  V  M  L  V  H  L  H  *  Y  I  *  T  F  S  C  S  I  S  S  S  K  Q  C  T  F  *  L  F  H  C  H  I  F  P  S  N  L  C  A  S  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17023" stop="17088"/>
                    <exon start="18168" stop="18313"/>
                    <exon start="20311" stop="20469"/>
                    <exon start="20556" stop="20622"/>
                    <exon start="21138" stop="21245"/>
                    <exon start="21348" stop="21487"/>
                    <exon start="21918" stop="22005"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRKTNTTTHEVLGVMTKGKTQICFFDTPGLMLKKSGFPYKDIKARIESAWRSIDLYDVLIVIFDAHRHLTKPDSRVVRLIERMGSEANPNQKRLLCINKVDLIEKKKDLLKVVEEFKDLPGYERCFTVSGLKGAGVKDLTKYLMEQSVKRPWDEDPFVMSEEVMKNISMEVVREKLLHYIHQEIPYGIDHRLMDWKELRDGSLRIEHHLITHKISQRKILVGKNGSKIGRIGIEANEELRTIFKRNVHLMLMVRVKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="18176" e_stop="18766"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="18176" e_stop="18766" e_length="591"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18176" stop="18766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203298" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGACACTCCCGGGCTTATGCTAAAGAAAAGTGGATTTCCTTACAAAGACATAAAAGCACGTATTGAAAGTGCATGGAGGTCTATTGATCTATATGATGTACTCATTGTCATATTTGATGCTCATAGGCATCTTACCAAGTTAGTTTTTCTTCTTGCTTCAACTCCAAAAGTTCATATTTATGCAATAACTATATGCTCATCTCATGATATTATGTATGCAACATTGTTATCTGTAATTACTAGTAATATATGATTTAATAATAGAAGAAAAAATATCATAGGCTAAGATGTGTTTTGCTTGTTTAATCTGGATATGTTTGTCTAATTTTCAGATTTTCATCGTTAGGCGAGTTCACAGAAGAACGTAGATAGTGTTTTCCATAGTAGTTCTCTTACCCCAAGCCTGCATGCACTTACTTCCTATATTTTTGGACTAGATAGCTCTCTAATTGGTATACTAGCCCATGTCATATGGTAAGATGTGCTTTGCTTGTTTAATCTGGATATGTTTTGTCTATTTCATAGTTAGGCGAGTTCACAGAAGAAGGTAGATAGTGTTTCCACAGTACTACCCTTACCCCCAAGCCTGCA</gDNA_template>
            <first_frame> *  H  S  R  A  Y  A  K  E  K  W  I  S  L  Q  R  H  K  S  T  Y  *  K  C  M  E  V  Y  *  S  I  *  C  T  H  C  H  I  *  C  S  *  A  S  Y  Q  V  S  F  S  S  C  F  N  S  K  S  S  Y  L  C  N  N  Y  M  L  I  S  *  Y  Y  V  C  N  I  V  I  C  N  Y  *  *  Y  M  I  *  *  *  K  K  K  Y  H  R  L  R  C  V  L  L  V  *  S  G  Y  V  C  L  I  F  R  F  S  S  L  G  E  F  T  E  E  R  R  *  C  F  P  *  *  F  S  Y  P  K  P  A  C  T  Y  F  L  Y  F  W  T  R  *  L  S  N  W  Y  T  S  P  C  H  M  V  R  C  A  L  L  V  *  S  G  Y  V  L  S  I  S  *  L  G  E  F  T  E  E  G  R  *  C  F  H  S  T  T  L  T  P  K  P  A </first_frame>
            <second_frame>  D  T  P  G  L  M  L  K  K  S  G  F  P  Y  K  D  I  K  A  R  I  E  S  A  W  R  S  I  D  L  Y  D  V  L  I  V  I  F  D  A  H  R  H  L  T  K  L  V  F  L  L  A  S  T  P  K  V  H  I  Y  A  I  T  I  C  S  S  H  D  I  M  Y  A  T  L  L  S  V  I  T  S  N  I  *  F  N  N  R  R  K  N  I  I  G  *  D  V  F  C  L  F  N  L  D  M  F  V  *  F  S  D  F  H  R  *  A  S  S  Q  K  N  V  D  S  V  F  H  S  S  S  L  T  P  S  L  H  A  L  T  S  Y  I  F  G  L  D  S  S  L  I  G  I  L  A  H  V  I  W  *  D  V  L  C  L  F  N  L  D  M  F  C  L  F  H  S  *  A  S  S  Q  K  K  V  D  S  V  S  T  V  L  P  L  P  P  S  L   </second_frame>
            <third_frame>   T  L  P  G  L  C  *  R  K  V  D  F  L  T  K  T  *  K  H  V  L  K  V  H  G  G  L  L  I  Y  M  M  Y  S  L  S  Y  L  M  L  I  G  I  L  P  S  *  F  F  F  L  L  Q  L  Q  K  F  I  F  M  Q  *  L  Y  A  H  L  M  I  L  C  M  Q  H  C  Y  L  *  L  L  V  I  Y  D  L  I  I  E  E  K  I  S  *  A  K  M  C  F  A  C  L  I  W  I  C  L  S  N  F  Q  I  F  I  V  R  R  V  H  R  R  T  *  I  V  F  S  I  V  V  L  L  P  Q  A  C  M  H  L  L  P  I  F  L  D  *  I  A  L  *  L  V  Y  *  P  M  S  Y  G  K  M  C  F  A  C  L  I  W  I  C  F  V  Y  F  I  V  R  R  V  H  R  R  R  *  I  V  F  P  Q  Y  Y  P  Y  P  Q  A  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18177" stop="18428"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DTPGLMLKKSGFPYKDIKARIESAWRSIDLYDVLIVIFDAHRHLTKLVFLLASTPKVHIYAITICSSHDIMYATLLSVITSNI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="28415" PGL_stop="28995"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28415" e_stop="28995"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="28415" e_stop="28995" e_length="581"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28415" stop="28995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314133" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAGCCAAAAAAGAGACTTTCCCTTCTAGTTTTCTGCCAAACATTCATATCTCTTTCCTCATTAGTGAAAAACTCCACCTCCTTAACTCACATGTCCACTGAATTTGAGAAACATAAAAGAGTAAAAATAACCTTAACTTTCCTTTTTACAACTCTCCTAGCTTCAAACTCAAAATCCCTTTTAGTATTATCTCCAATTATACTCTAAAAATGGAAGCTTTTCATCATCCCCCTATTAGCTTTCACTTTCCCTATGCTTTTCCTATCCCAACACCAACAACCAATTTTCTTGGAACTCCAAATTCATCATCAGTTAATGGAATGATCATCAACACTTGGATGGATAGTAGAATTTGGAGTAGACTTCCACATAGGCTTATTGATAGAATCATTGCTTTTCTACCACCACCTGCTTTCTTTAGAGCTAGAGTTGTGTGTAAGAGATTCTATGGACTTATTTACTCTACACATTTTCTTGAATTGTACTTGCAAGTTTCACCTAAGAGGAACTGGTTCATTTTCTTTAAACAAAAAGTACCAAGAAACAACATTTACAAGAACGTGATGAATAGTAGTAACT</gDNA_template>
            <first_frame> R  S  Q  K  R  D  F  P  F  *  F  S  A  K  H  S  Y  L  F  P  H  *  *  K  T  P  P  P  *  L  T  C  P  L  N  L  R  N  I  K  E  *  K  *  P  *  L  S  F  L  Q  L  S  *  L  Q  T  Q  N  P  F  *  Y  Y  L  Q  L  Y  S  K  N  G  S  F  S  S  S  P  Y  *  L  S  L  S  L  C  F  S  Y  P  N  T  N  N  Q  F  S  W  N  S  K  F  I  I  S  *  W  N  D  H  Q  H  L  D  G  *  *  N  L  E  *  T  S  T  *  A  Y  *  *  N  H  C  F  S  T  T  T  C  F  L  *  S  *  S  C  V  *  E  I  L  W  T  Y  L  L  Y  T  F  S  *  I  V  L  A  S  F  T  *  E  E  L  V  H  F  L  *  T  K  S  T  K  K  Q  H  L  Q  E  R  D  E  *  *  *   </first_frame>
            <second_frame>  E  A  K  K  E  T  F  P  S  S  F  L  P  N  I  H  I  S  F  L  I  S  E  K  L  H  L  L  N  S  H  V  H  *  I  *  E  T  *  K  S  K  N  N  L  N  F  P  F  Y  N  S  P  S  F  K  L  K  I  P  F  S  I  I  S  N  Y  T  L  K  M  E  A  F  H  H  P  P  I  S  F  H  F  P  Y  A  F  P  I  P  T  P  T  T  N  F  L  G  T  P  N  S  S  S  V  N  G  M  I  I  N  T  W  M  D  S  R  I  W  S  R  L  P  H  R  L  I  D  R  I  I  A  F  L  P  P  P  A  F  F  R  A  R  V  V  C  K  R  F  Y  G  L  I  Y  S  T  H  F  L  E  L  Y  L  Q  V  S  P  K  R  N  W  F  I  F  F  K  Q  K  V  P  R  N  N  I  Y  K  N  V  M  N  S  S  N  </second_frame>
            <third_frame>   K  P  K  K  R  L  S  L  L  V  F  C  Q  T  F  I  S  L  S  S  L  V  K  N  S  T  S  L  T  H  M  S  T  E  F  E  K  H  K  R  V  K  I  T  L  T  F  L  F  T  T  L  L  A  S  N  S  K  S  L  L  V  L  S  P  I  I  L  *  K  W  K  L  F  I  I  P  L  L  A  F  T  F  P  M  L  F  L  S  Q  H  Q  Q  P  I  F  L  E  L  Q  I  H  H  Q  L  M  E  *  S  S  T  L  G  W  I  V  E  F  G  V  D  F  H  I  G  L  L  I  E  S  L  L  F  Y  H  H  L  L  S  L  E  L  E  L  C  V  R  D  S  M  D  L  F  T  L  H  I  F  L  N  C  T  C  K  F  H  L  R  G  T  G  S  F  S  L  N  K  K  Y  Q  E  T  T  F  T  R  T  *  *  I  V  V  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28533" stop="28994"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSKNNLNFPFYNSPSFKLKIPFSIISNYTLKMEAFHHPPISFHFPYAFPIPTPTTNFLGTPNSSSVNGMIINTWMDSRIWSRLPHRLIDRIIAFLPPPAFFRARVVCKRFYGLIYSTHFLELYLQVSPKRNWFIFFKQKVPRNNIYKNVMNSSN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="31735" PGL_stop="31003"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31735" e_stop="31705"/>
            <exon e_start="31545" e_stop="31003"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="31735" e_stop="31705" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="1.000">
            <gDNA_intron_boundary i_start="31704" i_stop="31546" i_length="159"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="31545" e_stop="31003" e_length="543"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31735" stop="31705"/>
              <exon start="31545" stop="31003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31735" stop="31705"/>
              <exon start="31545" stop="31003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31735" stop="31705"/>
              <exon start="31545" stop="31007"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349075" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCTTCTTGGCTACCAGCAGGCACTCCTAA : GGATGAGGAGTCTACAGAGGAGAAACAACAGAAAAAGAAGAGAAGGAAGGATCAGCAAGATGAAACTGCGTTTGACGAAGACATTGTAGAGGATTTTATTCTCAGTTCTGATGATGAGGAGGGTTCCTTGAGTGACGCCCCCTCTGATGAAGAAGCCAGCATAAAACAAAAGCCATCTAAAGCGCCTTCAAAGAAGAAAGGGAAAACTCATCGGAGGAAGAACAAGAAAAGGAAGCAATCCAATCAAGCAGCATCTTCTGTCTGATGATTCTTGTACAAGGAACAAGAACAGTGTAGCATAAGCCAGTTTGTCCAGTGTAAGCTCTAAGCAAAATATATTATACTGTACTAGTTAGCTATCAATTTTGTTTTCCTTTATCCTAAAAAAATTTTCGTGCCATGTAGGGCAGACTACGTATAACAATTCATACATAACTAATCGCAACTAGTTGGGAATGGAGATGTAATTCATTGATCGATCTATTTCTTTTTGGCACTTATAGAGGTCGTTCTTTTGATGTACCCCTTTGATCACAACTCGAG</gDNA_template>
            <first_frame> V  L  L  G  Y  Q  Q  A  L  L   : R  M  R  S  L  Q  R  R  N  N  R  K  R  R  E  G  R  I  S  K  M  K  L  R  L  T  K  T  L  *  R  I  L  F  S  V  L  M  M  R  R  V  P  *  V  T  P  P  L  M  K  K  P  A  *  N  K  S  H  L  K  R  L  Q  R  R  K  G  K  L  I  G  G  R  T  R  K  G  S  N  P  I  K  Q  H  L  L  S  D  D  S  C  T  R  N  K  N  S  V  A  *  A  S  L  S  S  V  S  S  K  Q  N  I  L  Y  C  T  S  *  L  S  I  L  F  S  F  I  L  K  K  F  S  C  H  V  G  Q  T  T  Y  N  N  S  Y  I  T  N  R  N  *  L  G  M  E  M  *  F  I  D  R  S  I  S  F  W  H  L  *  R  S  F  F  *  C  T  P  L  I  T  T  R  </first_frame>
            <second_frame>  F  F  L  A  T  S  R  H  S  *  :  G  *  G  V  Y  R  G  E  T  T  E  K  E  E  K  E  G  S  A  R  *  N  C  V  *  R  R  H  C  R  G  F  Y  S  Q  F  *  *  *  G  G  F  L  E  *  R  P  L  *  *  R  S  Q  H  K  T  K  A  I  *  S  A  F  K  E  E  R  E  N  S  S  E  E  E  Q  E  K  E  A  I  Q  S  S  S  I  F  C  L  M  I  L  V  Q  G  T  R  T  V  *  H  K  P  V  C  P  V  *  A  L  S  K  I  Y  Y  T  V  L  V  S  Y  Q  F  C  F  P  L  S  *  K  N  F  R  A  M  *  G  R  L  R  I  T  I  H  T  *  L  I  A  T  S  W  E  W  R  C  N  S  L  I  D  L  F  L  F  G  T  Y  R  G  R  S  F  D  V  P  L  *  S  Q  L  E </second_frame>
            <third_frame>   S  S  W  L  P  A  G  T  P  K :   D  E  E  S  T  E  E  K  Q  Q  K  K  K  R  R  K  D  Q  Q  D  E  T  A  F  D  E  D  I  V  E  D  F  I  L  S  S  D  D  E  E  G  S  L  S  D  A  P  S  D  E  E  A  S  I  K  Q  K  P  S  K  A  P  S  K  K  K  G  K  T  H  R  R  K  N  K  K  R  K  Q  S  N  Q  A  A  S  S  V  *  *  F  L  Y  K  E  Q  E  Q  C  S  I  S  Q  F  V  Q  C  K  L  *  A  K  Y  I  I  L  Y  *  L  A  I  N  F  V  F  L  Y  P  K  K  I  F  V  P  C  R  A  D  Y  V  *  Q  F  I  H  N  *  S  Q  L  V  G  N  G  D  V  I  H  *  S  I  Y  F  F  L  A  L  I  E  V  V  L  L  M  Y  P  F  D  H  N  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31733" stop="31705"/>
                    <exon start="31545" stop="31281"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSWLPAGTPKDEESTEEKQQKKKRRKDQQDETAFDEDIVEDFILSSDDEEGSLSDAPSDEEASIKQKPSKAPSKKKGKTHRRKNKKRKQSNQAASSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="35101" PGL_stop="33569"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35101" e_stop="34745"/>
            <exon e_start="34262" e_stop="33957"/>
            <exon e_start="33620" e_stop="33569"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.969" acc_prob="0.884" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.886" e_score="1.000"/>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="35101" e_stop="34745" e_length="357"/>
          </exon>
          <intron i_serial="1" don_prob="0.969" acc_prob="0.884">
            <gDNA_intron_boundary i_start="34744" i_stop="34263" i_length="482"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34262" e_stop="33957" e_length="306"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.886">
            <gDNA_intron_boundary i_start="33956" i_stop="33621" i_length="336"/>
          </intron>
          <exon e_serial="3" e_score="0.942">
            <gDNA_exon_boundary e_start="33620" e_stop="33569" e_length="52"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35101" stop="34745"/>
              <exon start="34262" stop="33957"/>
              <exon start="33620" stop="33569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35100" stop="34745"/>
              <exon start="34262" stop="34209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295566" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGCACAGCTTGTCATTATGGCGATGATACTGGTGAAGATGCTAAGTCAAAGTGGAGTACTATGTCTAGCACTGTGTTCAACAAGATAATGTTATTTGTTCTAAAAGAAATGGATGGAATTCTTCGTGGCCTTTTGAAATTACCAACTTCTGGTGGGAAGAAGGAGATGATAAAGGATATGTCTAAAACTAAACGATGGAAGAGCAACAACCACTTGGTCAAATCATATCTTGGGAATGCGCTACATGTTCTAAATCAGATGACAGATACAGAAATGATATCATTTACATTACGAAGACTCAGATTTTCATCTGTATTTTTGGCTGCTTTTCCAGTTCTTTTGAGGAAATATATAAAG : GTTCTTCTTCATTTCTGGGGTACAGGCGGAGGTGCACTACCAGTTGTCTCTTTTTTGTTTCTAAGGGATCTGTGTATACAGCTTGGCTCTGATTGCATTGATGAGTGCATTAGAGGGATGTATAAAGCTTATTTATTGAACTGCCAATTCATGAATGCGTCAAAGCTGCAGCATATTCAATTTCTTGGTAATTGTTTCGTTGAACTCCTTAGGGTGGATCTTCCCAATGCGTACCAGCATGCCTTTGTTTTCATTCGGCAGTTGGCAATGATTTTACGGGATGCGCATAGTAGTACTAAGACCAAG : AAATCGTCTAAAAAGGCTAACCAATCATCCAAGGAAGCACACAATACCAAGG</gDNA_template>
            <first_frame> R  T  A  C  H  Y  G  D  D  T  G  E  D  A  K  S  K  W  S  T  M  S  S  T  V  F  N  K  I  M  L  F  V  L  K  E  M  D  G  I  L  R  G  L  L  K  L  P  T  S  G  G  K  K  E  M  I  K  D  M  S  K  T  K  R  W  K  S  N  N  H  L  V  K  S  Y  L  G  N  A  L  H  V  L  N  Q  M  T  D  T  E  M  I  S  F  T  L  R  R  L  R  F  S  S  V  F  L  A  A  F  P  V  L  L  R  K  Y  I  K  :  V  L  L  H  F  W  G  T  G  G  G  A  L  P  V  V  S  F  L  F  L  R  D  L  C  I  Q  L  G  S  D  C  I  D  E  C  I  R  G  M  Y  K  A  Y  L  L  N  C  Q  F  M  N  A  S  K  L  Q  H  I  Q  F  L  G  N  C  F  V  E  L  L  R  V  D  L  P  N  A  Y  Q  H  A  F  V  F  I  R  Q  L  A  M  I  L  R  D  A  H  S  S  T  K  T  K  :  K  S  S  K  K  A  N  Q  S  S  K  E  A  H  N  T  K  </first_frame>
            <second_frame>  A  Q  L  V  I  M  A  M  I  L  V  K  M  L  S  Q  S  G  V  L  C  L  A  L  C  S  T  R  *  C  Y  L  F  *  K  K  W  M  E  F  F  V  A  F  *  N  Y  Q  L  L  V  G  R  R  R  *  *  R  I  C  L  K  L  N  D  G  R  A  T  T  T  W  S  N  H  I  L  G  M  R  Y  M  F  *  I  R  *  Q  I  Q  K  *  Y  H  L  H  Y  E  D  S  D  F  H  L  Y  F  W  L  L  F  Q  F  F  *  G  N  I  *  R :   F  F  F  I  S  G  V  Q  A  E  V  H  Y  Q  L  S  L  F  C  F  *  G  I  C  V  Y  S  L  A  L  I  A  L  M  S  A  L  E  G  C  I  K  L  I  Y  *  T  A  N  S  *  M  R  Q  S  C  S  I  F  N  F  L  V  I  V  S  L  N  S  L  G  W  I  F  P  M  R  T  S  M  P  L  F  S  F  G  S  W  Q  *  F  Y  G  M  R  I  V  V  L  R  P  R :   N  R  L  K  R  L  T  N  H  P  R  K  H  T  I  P  R </second_frame>
            <third_frame>   H  S  L  S  L  W  R  *  Y  W  *  R  C  *  V  K  V  E  Y  Y  V  *  H  C  V  Q  Q  D  N  V  I  C  S  K  R  N  G  W  N  S  S  W  P  F  E  I  T  N  F  W  W  E  E  G  D  D  K  G  Y  V  *  N  *  T  M  E  E  Q  Q  P  L  G  Q  I  I  S  W  E  C  A  T  C  S  K  S  D  D  R  Y  R  N  D  I  I  Y  I  T  K  T  Q  I  F  I  C  I  F  G  C  F  S  S  S  F  E  E  I  Y  K   : G  S  S  S  F  L  G  Y  R  R  R  C  T  T  S  C  L  F  F  V  S  K  G  S  V  Y  T  A  W  L  *  L  H  *  *  V  H  *  R  D  V  *  S  L  F  I  E  L  P  I  H  E  C  V  K  A  A  A  Y  S  I  S  W  *  L  F  R  *  T  P  *  G  G  S  S  Q  C  V  P  A  C  L  C  F  H  S  A  V  G  N  D  F  T  G  C  A  *  *  Y  *  D  Q   : E  I  V  *  K  G  *  P  I  I  Q  G  S  T  Q  Y  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35101" stop="34745"/>
                    <exon start="34262" stop="33957"/>
                    <exon start="33620" stop="33570"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTACHYGDDTGEDAKSKWSTMSSTVFNKIMLFVLKEMDGILRGLLKLPTSGGKKEMIKDMSKTKRWKSNNHLVKSYLGNALHVLNQMTDTEMISFTLRRLRFSSVFLAAFPVLLRKYIKVLLHFWGTGGGALPVVSFLFLRDLCIQLGSDCIDECIRGMYKAYLLNCQFMNASKLQHIQFLGNCFVELLRVDLPNAYQHAFVFIRQLAMILRDAHSSTKTKKSSKKANQSSKEAHNTK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="38163" PGL_stop="37937"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38163" e_stop="37937"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="38163" e_stop="37937" e_length="227"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38163" stop="37937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216569" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATGGTGGATCCGCCACGGGGAGGGAGAGGAAATGGATGTTTCCGGTGGCGGCGGTGGTGAGAGAGTCAATATAGGATTGGACAAGTGGTCTTTGAGGGATGTTAATTAAGAGTATGGTGGCTGAAATATTTTTGTTTTTTTGAGTGAAGACTTTAGCAAACTCAATAATTGGAACAATGTTGCCAGGTGCTGGTGTTGAAATGAACACTACCTTTCCTCTTTTCAT</gDNA_template>
            <first_frame> D  G  G  S  A  T  G  R  E  R  K  W  M  F  P  V  A  A  V  V  R  E  S  I  *  D  W  T  S  G  L  *  G  M  L  I  K  S  M  V  A  E  I  F  L  F  F  *  V  K  T  L  A  N  S  I  I  G  T  M  L  P  G  A  G  V  E  M  N  T  T  F  P  L  F   </first_frame>
            <second_frame>  M  V  D  P  P  R  G  G  R  G  N  G  C  F  R  W  R  R  W  *  E  S  Q  Y  R  I  G  Q  V  V  F  E  G  C  *  L  R  V  W  W  L  K  Y  F  C  F  F  E  *  R  L  *  Q  T  Q  *  L  E  Q  C  C  Q  V  L  V  L  K  *  T  L  P  F  L  F  S  </second_frame>
            <third_frame>   W  W  I  R  H  G  E  G  E  E  M  D  V  S  G  G  G  G  G  E  R  V  N  I  G  L  D  K  W  S  L  R  D  V  N  *  E  Y  G  G  *  N  I  F  V  F  L  S  E  D  F  S  K  L  N  N  W  N  N  V  A  R  C  W  C  *  N  E  H  Y  L  S  S  F  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0075D08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="37945" PGL_stop="39573"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37945" e_stop="39573"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="37945" e_stop="39573" e_length="1629"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37945" stop="38757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37946" stop="38558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311655" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38057" stop="38759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38349" stop="38890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38483" stop="38855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301087" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38884" stop="39573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545264" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39179" stop="39556"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39226" stop="39555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216472" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAAGGTAGTGTTCATTTCAACACCAGCACCTGGCAACATTGTTCCAATTATTGAGTTTGCTAAAGTCTTCACTCAAAAAAACAAAAATATTTCAGCCACCATACTCTTAATTAACATCCCTCAAAGACCACTTGTCCAATCCTATATTGACTCTCTCACCACCGCCGCCACCGGAAACATCCATTTCCTCTCCCTCCCCGTGGCGGATCCACCATCGCTCGATCAATTCGACGCAACTATAGGCTTTTTATCGCTATTAATACAAAATCACACGTTACAAGTCAAAAATGCACTTATTGACCTTATTTCAGACTCGGACTCGGGGCAAGTTGTTGGATTCTTTATTGACATGTTTTGTACATCTTTTATTGATGTAGCTAAGGAACTAAACATCCCATGTTATCTCTACTTTGCTTCCCCTGCTACTTTCTTGAGCTTCATGTTGCATCTCCCAATATTAGATGCTCAAGTTAGTACTAATATTGAGTACAAAGATTCAGCCAATGATTTCAACATTCTTGGTTTTTCCAATCCTGTCCCTATCAAATGTTTCCCTTCATTCATGCTAAAAAGACATATAGATGGTTATTCTTGGTTCCTACATCATGCAAAAAGGTACAAAGAAACAAAGGGTATTATTGTCAACACGTTTCAAGAACTTGAACCATATTGCTTAAACTCATTAGTACATACTACAACTAGTCATGTTGTACCACCAATTTATCCAATTGGACCTGTAGTGGATCATAATGGACCAGCTCAGTGGCATCAAGATTCTTGGGGTCATGAAAATGTTATGAAATGGCTTGATAATCAAGAACCATCATCAGTAATTTTCTTGAGTTTTGGAAGTATGGGAAGTCTTAAAGATTCACAAGTGATGGAAATAGCAAAAGGTTTGGAGAAAGCAGGACACCCTTTTTTGTGGGCAATTAGAGAAGCACCGAAGGATAAAAGAGAACTTCCAAATGATTATACAAACTTAGAGGAAATTTTACCTAATGGGTTTTTAGAATCAACAAAAGGGAGAGGGCTAGTGTGTGGGTTGGTCCCACAAGTTACAATCTTGGCCCATAAGGCTATCGGAGGATTTGTGTCACACTGTGGTTGGAATTCGATTCTCGAAAGTTTATATTACGGAGTGCCAATTGGTACATGGCCAATATATGCAGAGCAACACTTGAATGCATTTGAGTTGGTGAAAGAGTTGGATTTGGCTGTGGAAATCACAATGGATTATAGAGATGGCACCACATTGGTTTCATCAGAGGAAGTGGCAAAAGGGGTTAAAAAATTAATGGATGGTGATGGTGATGGTGAGGTGAGACAAAAGTTCAAGAAAATGAGTGAGAAATGCAAGGATGTTTGGAAGGAAAATGGCTCATCTTCTAATTTTCTTGGACACTTGATTGATGAATTAATGGCTGTGATTTGAAGAAGGGTTGGCTAGTCCAAACTTGGTGGGCTTTGTTTGACTACAAAATTTAGTTGAATTTTATAAAGCGATGAAAATAAAGTTTTTTAGTTTATGTAATTCTACCTAATTATGTAATTTGGATTCAAAAATAATAATAATTAAAGTTACGATGATGAAGTACATTAATAAAACTTTTATTTTCTAAAAGA</gDNA_template>
            <first_frame> R  K  G  S  V  H  F  N  T  S  T  W  Q  H  C  S  N  Y  *  V  C  *  S  L  H  S  K  K  Q  K  Y  F  S  H  H  T  L  N  *  H  P  S  K  T  T  C  P  I  L  Y  *  L  S  H  H  R  R  H  R  K  H  P  F  P  L  P  P  R  G  G  S  T  I  A  R  S  I  R  R  N  Y  R  L  F  I  A  I  N  T  K  S  H  V  T  S  Q  K  C  T  Y  *  P  Y  F  R  L  G  L  G  A  S  C  W  I  L  Y  *  H  V  L  Y  I  F  Y  *  C  S  *  G  T  K  H  P  M  L  S  L  L  C  F  P  C  Y  F  L  E  L  H  V  A  S  P  N  I  R  C  S  S  *  Y  *  Y  *  V  Q  R  F  S  Q  *  F  Q  H  S  W  F  F  Q  S  C  P  Y  Q  M  F  P  F  I  H  A  K  K  T  Y  R  W  L  F  L  V  P  T  S  C  K  K  V  Q  R  N  K  G  Y  Y  C  Q  H  V  S  R  T  *  T  I  L  L  K  L  I  S  T  Y  Y  N  *  S  C  C  T  T  N  L  S  N  W  T  C  S  G  S  *  W  T  S  S  V  A  S  R  F  L  G  S  *  K  C  Y  E  M  A  *  *  S  R  T  I  I  S  N  F  L  E  F  W  K  Y  G  K  S  *  R  F  T  S  D  G  N  S  K  R  F  G  E  S  R  T  P  F  F  V  G  N  *  R  S  T  E  G  *  K  R  T  S  K  *  L  Y  K  L  R  G  N  F  T  *  W  V  F  R  I  N  K  R  E  R  A  S  V  W  V  G  P  T  S  Y  N  L  G  P  *  G  Y  R  R  I  C  V  T  L  W  L  E  F  D  S  R  K  F  I  L  R  S  A  N  W  Y  M  A  N  I  C  R  A  T  L  E  C  I  *  V  G  E  R  V  G  F  G  C  G  N  H  N  G  L  *  R  W  H  H  I  G  F  I  R  G  S  G  K  R  G  *  K  I  N  G  W  *  W  *  W  *  G  E  T  K  V  Q  E  N  E  *  E  M  Q  G  C  L  E  G  K  W  L  I  F  *  F  S  W  T  L  D  *  *  I  N  G  C  D  L  K  K  G  W  L  V  Q  T  W  W  A  L  F  D  Y  K  I  *  L  N  F  I  K  R  *  K  *  S  F  L  V  Y  V  I  L  P  N  Y  V  I  W  I  Q  K  *  *  *  L  K  L  R  *  *  S  T  L  I  K  L  L  F  S  K  R </first_frame>
            <second_frame>  G  K  V  V  F  I  S  T  P  A  P  G  N  I  V  P  I  I  E  F  A  K  V  F  T  Q  K  N  K  N  I  S  A  T  I  L  L  I  N  I  P  Q  R  P  L  V  Q  S  Y  I  D  S  L  T  T  A  A  T  G  N  I  H  F  L  S  L  P  V  A  D  P  P  S  L  D  Q  F  D  A  T  I  G  F  L  S  L  L  I  Q  N  H  T  L  Q  V  K  N  A  L  I  D  L  I  S  D  S  D  S  G  Q  V  V  G  F  F  I  D  M  F  C  T  S  F  I  D  V  A  K  E  L  N  I  P  C  Y  L  Y  F  A  S  P  A  T  F  L  S  F  M  L  H  L  P  I  L  D  A  Q  V  S  T  N  I  E  Y  K  D  S  A  N  D  F  N  I  L  G  F  S  N  P  V  P  I  K  C  F  P  S  F  M  L  K  R  H  I  D  G  Y  S  W  F  L  H  H  A  K  R  Y  K  E  T  K  G  I  I  V  N  T  F  Q  E  L  E  P  Y  C  L  N  S  L  V  H  T  T  T  S  H  V  V  P  P  I  Y  P  I  G  P  V  V  D  H  N  G  P  A  Q  W  H  Q  D  S  W  G  H  E  N  V  M  K  W  L  D  N  Q  E  P  S  S  V  I  F  L  S  F  G  S  M  G  S  L  K  D  S  Q  V  M  E  I  A  K  G  L  E  K  A  G  H  P  F  L  W  A  I  R  E  A  P  K  D  K  R  E  L  P  N  D  Y  T  N  L  E  E  I  L  P  N  G  F  L  E  S  T  K  G  R  G  L  V  C  G  L  V  P  Q  V  T  I  L  A  H  K  A  I  G  G  F  V  S  H  C  G  W  N  S  I  L  E  S  L  Y  Y  G  V  P  I  G  T  W  P  I  Y  A  E  Q  H  L  N  A  F  E  L  V  K  E  L  D  L  A  V  E  I  T  M  D  Y  R  D  G  T  T  L  V  S  S  E  E  V  A  K  G  V  K  K  L  M  D  G  D  G  D  G  E  V  R  Q  K  F  K  K  M  S  E  K  C  K  D  V  W  K  E  N  G  S  S  S  N  F  L  G  H  L  I  D  E  L  M  A  V  I  *  R  R  V  G  *  S  K  L  G  G  L  C  L  T  T  K  F  S  *  I  L  *  S  D  E  N  K  V  F  *  F  M  *  F  Y  L  I  M  *  F  G  F  K  N  N  N  N  *  S  Y  D  D  E  V  H  *  *  N  F  Y  F  L  K   </second_frame>
            <third_frame>   E  R  *  C  S  F  Q  H  Q  H  L  A  T  L  F  Q  L  L  S  L  L  K  S  S  L  K  K  T  K  I  F  Q  P  P  Y  S  *  L  T  S  L  K  D  H  L  S  N  P  I  L  T  L  S  P  P  P  P  P  E  T  S  I  S  S  P  S  P  W  R  I  H  H  R  S  I  N  S  T  Q  L  *  A  F  Y  R  Y  *  Y  K  I  T  R  Y  K  S  K  M  H  L  L  T  L  F  Q  T  R  T  R  G  K  L  L  D  S  L  L  T  C  F  V  H  L  L  L  M  *  L  R  N  *  T  S  H  V  I  S  T  L  L  P  L  L  L  S  *  A  S  C  C  I  S  Q  Y  *  M  L  K  L  V  L  I  L  S  T  K  I  Q  P  M  I  S  T  F  L  V  F  P  I  L  S  L  S  N  V  S  L  H  S  C  *  K  D  I  *  M  V  I  L  G  S  Y  I  M  Q  K  G  T  K  K  Q  R  V  L  L  S  T  R  F  K  N  L  N  H  I  A  *  T  H  *  Y  I  L  Q  L  V  M  L  Y  H  Q  F  I  Q  L  D  L  *  W  I  I  M  D  Q  L  S  G  I  K  I  L  G  V  M  K  M  L  *  N  G  L  I  I  K  N  H  H  Q  *  F  S  *  V  L  E  V  W  E  V  L  K  I  H  K  *  W  K  *  Q  K  V  W  R  K  Q  D  T  L  F  C  G  Q  L  E  K  H  R  R  I  K  E  N  F  Q  M  I  I  Q  T  *  R  K  F  Y  L  M  G  F  *  N  Q  Q  K  G  E  G  *  C  V  G  W  S  H  K  L  Q  S  W  P  I  R  L  S  E  D  L  C  H  T  V  V  G  I  R  F  S  K  V  Y  I  T  E  C  Q  L  V  H  G  Q  Y  M  Q  S  N  T  *  M  H  L  S  W  *  K  S  W  I  W  L  W  K  S  Q  W  I  I  E  M  A  P  H  W  F  H  Q  R  K  W  Q  K  G  L  K  N  *  W  M  V  M  V  M  V  R  *  D  K  S  S  R  K  *  V  R  N  A  R  M  F  G  R  K  M  A  H  L  L  I  F  L  D  T  *  L  M  N  *  W  L  *  F  E  E  G  L  A  S  P  N  L  V  G  F  V  *  L  Q  N  L  V  E  F  Y  K  A  M  K  I  K  F  F  S  L  C  N  S  T  *  L  C  N  L  D  S  K  I  I  I  I  K  V  T  M  M  K  Y  I  N  K  T  F  I  F  *  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37946" stop="39382"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1434</number_coding_nucleotides>
                  <number_encoded_amino_acids>478</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKVVFISTPAPGNIVPIIEFAKVFTQKNKNISATILLINIPQRPLVQSYIDSLTTAATGNIHFLSLPVADPPSLDQFDATIGFLSLLIQNHTLQVKNALIDLISDSDSGQVVGFFIDMFCTSFIDVAKELNIPCYLYFASPATFLSFMLHLPILDAQVSTNIEYKDSANDFNILGFSNPVPIKCFPSFMLKRHIDGYSWFLHHAKRYKETKGIIVNTFQELEPYCLNSLVHTTTSHVVPPIYPIGPVVDHNGPAQWHQDSWGHENVMKWLDNQEPSSVIFLSFGSMGSLKDSQVMEIAKGLEKAGHPFLWAIREAPKDKRELPNDYTNLEEILPNGFLESTKGRGLVCGLVPQVTILAHKAIGGFVSHCGWNSILESLYYGVPIGTWPIYAEQHLNAFELVKELDLAVEITMDYRDGTTLVSSEEVAKGVKKLMDGDGDGEVRQKFKKMSEKCKDVWKENGSSSNFLGHLIDELMAVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="40163" PGL_stop="44717"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40163" e_stop="40252"/>
            <exon e_start="43337" e_stop="44717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="0.922"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="40163" e_stop="40252" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="40253" i_stop="43336" i_length="3084"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="43337" e_stop="44717" e_length="1381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40163" stop="40252"/>
              <exon start="43337" stop="44093"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721998" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40206" stop="40252"/>
              <exon start="43337" stop="44044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697748" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40207" stop="40252"/>
              <exon start="43337" stop="43909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40210" stop="40252"/>
              <exon start="43337" stop="44229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707503" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40211" stop="40252"/>
              <exon start="43337" stop="44069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40212" stop="40252"/>
              <exon start="43337" stop="43825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40232" stop="40252"/>
              <exon start="43337" stop="43823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358990" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40238" stop="40252"/>
              <exon start="43337" stop="44044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40238" stop="40252"/>
              <exon start="43337" stop="43996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="43825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43338" stop="43905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43418" stop="43662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43605" stop="44257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43872" stop="44262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43932" stop="44257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239253" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43981" stop="44245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43981" stop="44245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44018" stop="44717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352884" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATAAGACTAGCTTCACTCTTCGTCTACATAAAGAAGAGAAAACCTCTCGACTCTTTTCATTGCGCTTCTCTTTAGATCTCACATCTCAG : GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGGATTTACTTCATCATTTGTTGTTATCGTGGTACTTTACTGCATTTGACATGTTTGTGCCTCTGTTTGCCTGAGAAAGAAAAGAACACACAAACATACCCTCCATCTTTCTCAATTTTAACTTGATGCAACTACCGTAGGGGAAGAAGGTGAGATCTTTTCATCTTGTAGCTATCCATTTTAAACATTATTTCCTTCCTCCGACTAGTAACTATTTAGTCCTCTAAAGCTCTGAGGATTTTGGTTATGTAGTGGTGATTATACCAAAGCAGAAGGTATGATGATTATTCAGAATGGAAGGAATAATGTGCAAGTAGAAGGTATGTTTATCATTTTGATCGCATGAATGTCTACCTAAAGCTTATCATCATGACCTCTCACAAAAATGTAAAAACAGTTACTTTGGACATAATATCAGATAGTTTCATATCATAATATAATGTTAACTATTACCATTTACAAT</gDNA_template>
            <first_frame> N  K  T  S  F  T  L  R  L  H  K  E  E  K  T  S  R  L  F  S  L  R  F  S  L  D  L  T  S  Q  :  V  F  C  S  K  E  K  N  V  T  K  V  *  *  P  N  N  N  L  L  P  R  R  S  S  L  P  S  *  V  R  N  G  G  Y  W  K  C  R  *  C  Y  R  H  L  V  Q  G  W  G  G  V  G  R  *  K  E  S  Y  I  *  A  A  S  D  L  Y  F  K  *  E  D  V  Q  D  R  *  S  C  G  M  R  C  S  W  N  Y  V  *  C  Q  H  S  D  Q  H  S  Q  V  S  G  S  A  L  Y  V  R  L  S  R  T  H  A  S  *  A  T  C  P  V  T  M  *  Y  Q  A  R  L  H  T  V  W  W  A  S  P  F  W  C  F  I  S  L  C  R  L  G  *  K  L  W  L  P  T  L  H  E  R  P  K  W  K  L  R  W  L  E  S  R  S  N  W  S  K  Q  P  G  S  S  I  N  S  *  A  G  L  Q  G  *  Y  H  K  G  R  G  R  S  T  C  S  *  S  A  W  *  D  N  G  Q  H  *  P  H  F  G  E  T  *  T  C  *  G  I  S  L  *  R  E  S  Q  V  S  S  M  L  S  R  N  S  E  Q  N  V  G  E  C  W  T  D  S  T  Y  S  R  R  I  V  V  E  C  L  P  I  *  H  M  T  S  L  N  S  L  Y  A  M  C  D  M  L  Y  *  N  *  V  V  D  L  S  S  Y  N  C  M  H  I  Y  V  K  C  F  P  V  *  I  L  F  W  I  Y  F  I  I  C  C  Y  R  G  T  L  L  H  L  T  C  L  C  L  C  L  P  E  K  E  K  N  T  Q  T  Y  P  P  S  F  S  I  L  T  *  C  N  Y  R  R  G  R  R  *  D  L  F  I  L  *  L  S  I  L  N  I  I  S  F  L  R  L  V  T  I  *  S  S  K  A  L  R  I  L  V  M  *  W  *  L  Y  Q  S  R  R  Y  D  D  Y  S  E  W  K  E  *  C  A  S  R  R  Y  V  Y  H  F  D  R  M  N  V  Y  L  K  L  I  I  M  T  S  H  K  N  V  K  T  V  T  L  D  I  I  S  D  S  F  I  S  *  Y  N  V  N  Y  Y  H  L  Q  </first_frame>
            <second_frame>  I  R  L  A  S  L  F  V  Y  I  K  K  R  K  P  L  D  S  F  H  C  A  S  L  *  I  S  H  L  R :   Y  S  A  V  K  K  K  M  S  R  R  Y  D  S  R  T  T  I  F  S  P  E  G  R  L  Y  Q  V  E  Y  A  M  E  A  I  G  N  A  G  S  A  I  G  I  L  S  K  D  G  V  V  L  V  G  E  K  K  V  T  S  K  L  L  Q  T  S  T  S  S  E  K  M  Y  K  I  D  D  H  V  A  C  A  V  A  G  I  M  S  D  A  N  I  L  I  N  T  A  R  F  Q  A  Q  R  Y  T  F  A  Y  Q  E  P  M  P  V  E  Q  L  V  Q  S  L  C  D  T  K  Q  G  Y  T  Q  F  G  G  L  R  P  F  G  V  S  F  L  F  A  G  W  D  K  N  Y  G  F  Q  L  Y  M  S  D  P  S  G  N  Y  G  G  W  K  A  A  A  I  G  A  N  N  Q  A  A  Q  S  I  L  K  Q  D  Y  K  D  D  I  T  R  E  E  A  V  Q  L  A  L  K  V  L  G  K  T  M  D  S  T  S  L  T  S  E  K  L  E  L  A  E  V  F  L  S  N  G  K  V  K  Y  Q  A  C  S  P  E  T  L  N  K  M  L  V  S  A  G  L  T  Q  P  T  V  E  E  *  S  *  N  A  F  Q  S  S  I  *  H  H  *  T  L  S  T  P  C  V  T  C  C  T  K  T  K  W  W  I  C  L  L  T  T  A  C  I  F  M  S  N  A  F  Q  F  E  F  C  F  G  F  T  S  S  F  V  V  I  V  V  L  Y  C  I  *  H  V  C  A  S  V  C  L  R  K  K  R  T  H  K  H  T  L  H  L  S  Q  F  *  L  D  A  T  T  V  G  E  E  G  E  I  F  S  S  C  S  Y  P  F  *  T  L  F  P  S  S  D  *  *  L  F  S  P  L  K  L  *  G  F  W  L  C  S  G  D  Y  T  K  A  E  G  M  M  I  I  Q  N  G  R  N  N  V  Q  V  E  G  M  F  I  I  L  I  A  *  M  S  T  *  S  L  S  S  *  P  L  T  K  M  *  K  Q  L  L  W  T  *  Y  Q  I  V  S  Y  H  N  I  M  L  T  I  T  I  Y  N </second_frame>
            <third_frame>   *  D  *  L  H  S  S  S  T  *  R  R  E  N  L  S  T  L  F  I  A  L  L  F  R  S  H  I  S   : G  I  L  Q  *  R  K  K  C  H  E  G  M  I  A  E  Q  Q  S  S  P  Q  K  V  V  S  T  K  L  S  T  Q  W  R  L  L  E  M  Q  V  V  L  *  A  S  C  P  R  M  G  W  C  W  *  V  K  R  K  L  H  L  S  C  F  R  P  L  L  Q  V  R  R  C  T  R  S  M  I  M  W  H  A  L  *  L  E  L  C  L  M  P  T  F  *  S  T  Q  P  G  F  R  L  S  A  I  R  S  L  I  K  N  P  C  Q  L  S  N  L  S  S  H  Y  V  I  P  S  K  V  T  H  S  L  V  G  F  A  L  L  V  F  H  F  S  L  Q  V  G  I  K  T  M  A  S  N  F  T  *  A  T  Q  V  E  I  T  V  V  G  K  P  Q  Q  L  E  Q  T  T  R  Q  L  N  Q  F  L  S  R  I  T  R  M  I  S  Q  G  K  R  P  F  N  L  L  L  K  C  L  V  R  Q  W  T  A  L  A  S  L  R  R  N  L  N  L  L  R  Y  F  S  L  T  G  K  S  S  I  K  H  A  L  P  K  L  *  T  K  C  W  *  V  L  D  *  L  N  L  Q  *  K  N  S  R  R  M  P  S  N  L  A  Y  D  I  I  E  L  S  L  R  H  V  *  H  V  V  L  K  L  S  G  G  F  V  F  L  Q  L  H  A  Y  L  C  Q  M  L  S  S  L  N  F  V  L  D  L  L  H  H  L  L  L  S  W  Y  F  T  A  F  D  M  F  V  P  L  F  A  *  E  R  K  E  H  T  N  I  P  S  I  F  L  N  F  N  L  M  Q  L  P  *  G  K  K  V  R  S  F  H  L  V  A  I  H  F  K  H  Y  F  L  P  P  T  S  N  Y  L  V  L  *  S  S  E  D  F  G  Y  V  V  V  I  I  P  K  Q  K  V  *  *  L  F  R  M  E  G  I  M  C  K  *  K  V  C  L  S  F  *  S  H  E  C  L  P  K  A  Y  H  H  D  L  S  Q  K  C  K  N  S  Y  F  G  H  N  I  R  *  F  H  I  I  I  *  C  *  L  L  P  F  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40239" stop="40252"/>
                    <exon start="43337" stop="44105"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISHLRYSAVKKKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARFQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDITREEAVQLALKVLGKTMDSTSLTSEKLELAEVFLSNGKVKYQACSPETLNKMLVSAGLTQPTVEE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="43326" e_stop="44717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="43326" e_stop="44717" e_length="1392"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43326" stop="43570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304920" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43327" stop="43735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391717" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43328" stop="43823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="43825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43338" stop="43905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43418" stop="43662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43605" stop="44257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43872" stop="44262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43932" stop="44257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239253" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43981" stop="44245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43981" stop="44245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44018" stop="44717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352884" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATTTATCAGGTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGGATTTACTTCATCATTTGTTGTTATCGTGGTACTTTACTGCATTTGACATGTTTGTGCCTCTGTTTGCCTGAGAAAGAAAAGAACACACAAACATACCCTCCATCTTTCTCAATTTTAACTTGATGCAACTACCGTAGGGGAAGAAGGTGAGATCTTTTCATCTTGTAGCTATCCATTTTAAACATTATTTCCTTCCTCCGACTAGTAACTATTTAGTCCTCTAAAGCTCTGAGGATTTTGGTTATGTAGTGGTGATTATACCAAAGCAGAAGGTATGATGATTATTCAGAATGGAAGGAATAATGTGCAAGTAGAAGGTATGTTTATCATTTTGATCGCATGAATGTCTACCTAAAGCTTATCATCATGACCTCTCACAAAAATGTAAAAACAGTTACTTTGGACATAATATCAGATAGTTTCATATCATAATATAATGTTAACTATTACCATTTACAAT</gDNA_template>
            <first_frame> *  F  I  R  Y  S  A  V  K  K  K  M  S  R  R  Y  D  S  R  T  T  I  F  S  P  E  G  R  L  Y  Q  V  E  Y  A  M  E  A  I  G  N  A  G  S  A  I  G  I  L  S  K  D  G  V  V  L  V  G  E  K  K  V  T  S  K  L  L  Q  T  S  T  S  S  E  K  M  Y  K  I  D  D  H  V  A  C  A  V  A  G  I  M  S  D  A  N  I  L  I  N  T  A  R  F  Q  A  Q  R  Y  T  F  A  Y  Q  E  P  M  P  V  E  Q  L  V  Q  S  L  C  D  T  K  Q  G  Y  T  Q  F  G  G  L  R  P  F  G  V  S  F  L  F  A  G  W  D  K  N  Y  G  F  Q  L  Y  M  S  D  P  S  G  N  Y  G  G  W  K  A  A  A  I  G  A  N  N  Q  A  A  Q  S  I  L  K  Q  D  Y  K  D  D  I  T  R  E  E  A  V  Q  L  A  L  K  V  L  G  K  T  M  D  S  T  S  L  T  S  E  K  L  E  L  A  E  V  F  L  S  N  G  K  V  K  Y  Q  A  C  S  P  E  T  L  N  K  M  L  V  S  A  G  L  T  Q  P  T  V  E  E  *  S  *  N  A  F  Q  S  S  I  *  H  H  *  T  L  S  T  P  C  V  T  C  C  T  K  T  K  W  W  I  C  L  L  T  T  A  C  I  F  M  S  N  A  F  Q  F  E  F  C  F  G  F  T  S  S  F  V  V  I  V  V  L  Y  C  I  *  H  V  C  A  S  V  C  L  R  K  K  R  T  H  K  H  T  L  H  L  S  Q  F  *  L  D  A  T  T  V  G  E  E  G  E  I  F  S  S  C  S  Y  P  F  *  T  L  F  P  S  S  D  *  *  L  F  S  P  L  K  L  *  G  F  W  L  C  S  G  D  Y  T  K  A  E  G  M  M  I  I  Q  N  G  R  N  N  V  Q  V  E  G  M  F  I  I  L  I  A  *  M  S  T  *  S  L  S  S  *  P  L  T  K  M  *  K  Q  L  L  W  T  *  Y  Q  I  V  S  Y  H  N  I  M  L  T  I  T  I  Y  N </first_frame>
            <second_frame>  N  L  S  G  I  L  Q  *  R  K  K  C  H  E  G  M  I  A  E  Q  Q  S  S  P  Q  K  V  V  S  T  K  L  S  T  Q  W  R  L  L  E  M  Q  V  V  L  *  A  S  C  P  R  M  G  W  C  W  *  V  K  R  K  L  H  L  S  C  F  R  P  L  L  Q  V  R  R  C  T  R  S  M  I  M  W  H  A  L  *  L  E  L  C  L  M  P  T  F  *  S  T  Q  P  G  F  R  L  S  A  I  R  S  L  I  K  N  P  C  Q  L  S  N  L  S  S  H  Y  V  I  P  S  K  V  T  H  S  L  V  G  F  A  L  L  V  F  H  F  S  L  Q  V  G  I  K  T  M  A  S  N  F  T  *  A  T  Q  V  E  I  T  V  V  G  K  P  Q  Q  L  E  Q  T  T  R  Q  L  N  Q  F  L  S  R  I  T  R  M  I  S  Q  G  K  R  P  F  N  L  L  L  K  C  L  V  R  Q  W  T  A  L  A  S  L  R  R  N  L  N  L  L  R  Y  F  S  L  T  G  K  S  S  I  K  H  A  L  P  K  L  *  T  K  C  W  *  V  L  D  *  L  N  L  Q  *  K  N  S  R  R  M  P  S  N  L  A  Y  D  I  I  E  L  S  L  R  H  V  *  H  V  V  L  K  L  S  G  G  F  V  F  L  Q  L  H  A  Y  L  C  Q  M  L  S  S  L  N  F  V  L  D  L  L  H  H  L  L  L  S  W  Y  F  T  A  F  D  M  F  V  P  L  F  A  *  E  R  K  E  H  T  N  I  P  S  I  F  L  N  F  N  L  M  Q  L  P  *  G  K  K  V  R  S  F  H  L  V  A  I  H  F  K  H  Y  F  L  P  P  T  S  N  Y  L  V  L  *  S  S  E  D  F  G  Y  V  V  V  I  I  P  K  Q  K  V  *  *  L  F  R  M  E  G  I  M  C  K  *  K  V  C  L  S  F  *  S  H  E  C  L  P  K  A  Y  H  H  D  L  S  Q  K  C  K  N  S  Y  F  G  H  N  I  R  *  F  H  I  I  I  *  C  *  L  L  P  F  T   </second_frame>
            <third_frame>   I  Y  Q  V  F  C  S  K  E  K  N  V  T  K  V  *  *  P  N  N  N  L  L  P  R  R  S  S  L  P  S  *  V  R  N  G  G  Y  W  K  C  R  *  C  Y  R  H  L  V  Q  G  W  G  G  V  G  R  *  K  E  S  Y  I  *  A  A  S  D  L  Y  F  K  *  E  D  V  Q  D  R  *  S  C  G  M  R  C  S  W  N  Y  V  *  C  Q  H  S  D  Q  H  S  Q  V  S  G  S  A  L  Y  V  R  L  S  R  T  H  A  S  *  A  T  C  P  V  T  M  *  Y  Q  A  R  L  H  T  V  W  W  A  S  P  F  W  C  F  I  S  L  C  R  L  G  *  K  L  W  L  P  T  L  H  E  R  P  K  W  K  L  R  W  L  E  S  R  S  N  W  S  K  Q  P  G  S  S  I  N  S  *  A  G  L  Q  G  *  Y  H  K  G  R  G  R  S  T  C  S  *  S  A  W  *  D  N  G  Q  H  *  P  H  F  G  E  T  *  T  C  *  G  I  S  L  *  R  E  S  Q  V  S  S  M  L  S  R  N  S  E  Q  N  V  G  E  C  W  T  D  S  T  Y  S  R  R  I  V  V  E  C  L  P  I  *  H  M  T  S  L  N  S  L  Y  A  M  C  D  M  L  Y  *  N  *  V  V  D  L  S  S  Y  N  C  M  H  I  Y  V  K  C  F  P  V  *  I  L  F  W  I  Y  F  I  I  C  C  Y  R  G  T  L  L  H  L  T  C  L  C  L  C  L  P  E  K  E  K  N  T  Q  T  Y  P  P  S  F  S  I  L  T  *  C  N  Y  R  R  G  R  R  *  D  L  F  I  L  *  L  S  I  L  N  I  I  S  F  L  R  L  V  T  I  *  S  S  K  A  L  R  I  L  V  M  *  W  *  L  Y  Q  S  R  R  Y  D  D  Y  S  E  W  K  E  *  C  A  S  R  R  Y  V  Y  H  F  D  R  M  N  V  Y  L  K  L  I  I  M  T  S  H  K  N  V  K  T  V  T  L  D  I  I  S  D  S  F  I  S  *  Y  N  V  N  Y  Y  H  L  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43329" stop="44105"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIRYSAVKKKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARFQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDITREEAVQLALKVLGKTMDSTSLTSEKLELAEVFLSNGKVKYQACSPETLNKMLVSAGLTQPTVEE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="42606" e_stop="42733"/>
            <exon e_start="43337" e_stop="44717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.895" acc_prob="0.996" e_score="0.961"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="42606" e_stop="42733" e_length="128"/>
          </exon>
          <intron i_serial="1" don_prob="0.895" acc_prob="0.996">
            <gDNA_intron_boundary i_start="42734" i_stop="43336" i_length="603"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="43337" e_stop="44717" e_length="1381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42606" stop="42733"/>
              <exon start="43337" stop="43950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42608" stop="42733"/>
              <exon start="43337" stop="43706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731291" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44180"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699568" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="44083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43337" stop="43825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43338" stop="43905"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43418" stop="43662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43605" stop="44257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43872" stop="44262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43932" stop="44257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239253" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43981" stop="44245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43981" stop="44245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44018" stop="44717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352884" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGCCCCTGTTAGTTTGTTTTGAGAAGTACAGGGAAGGGTTAGCAGTTAGCACTCTGAAACATTTTTTTATGAGATAAGGAATTTCATTAAATGACATCATGAAGTGTCAGCTCCAACTTCATCTTGG : GTATTCTGCAGTAAAGAAAAAAATGTCACGAAGGTATGATAGCCGAACAACAATCTTCTCCCCAGAAGGTCGTCTCTACCAAGTTGAGTACGCAATGGAGGCTATTGGAAATGCAGGTAGTGCTATAGGCATCTTGTCCAAGGATGGGGTGGTGTTGGTAGGTGAAAAGAAAGTTACATCTAAGCTGCTTCAGACCTCTACTTCAAGTGAGAAGATGTACAAGATCGATGATCATGTGGCATGCGCTGTAGCTGGAATTATGTCTGATGCCAACATTCTGATCAACACAGCCAGGTTTCAGGCTCAGCGCTATACGTTCGCTTATCAAGAACCCATGCCAGTTGAGCAACTTGTCCAGTCACTATGTGATACCAAGCAAGGTTACACACAGTTTGGTGGGCTTCGCCCTTTTGGTGTTTCATTTCTCTTTGCAGGTTGGGATAAAAACTATGGCTTCCAACTTTACATGAGCGACCCAAGTGGAAATTACGGTGGTTGGAAAGCCGCAGCAATTGGAGCAAACAACCAGGCAGCTCAATCAATTCTTAAGCAGGATTACAAGGATGATATCACAAGGGAAGAGGCCGTTCAACTTGCTCTTAAAGTGCTTGGTAAGACAATGGACAGCACTAGCCTCACTTCGGAGAAACTTGAACTTGCTGAGGTATTTCTCTCTAACGGGAAAGTCAAGTATCAAGCATGCTCTCCCGAAACTCTGAACAAAATGTTGGTGAGTGCTGGACTGACTCAACCTACAGTAGAAGAATAGTCGTAGAATGCCTTCCAATCTAGCATATGACATCATTGAACTCTCTCTACGCCATGTGTGACATGTTGTACTAAAACTAAGTGGTGGATTTGTCTTCTTACAACTGCATGCATATTTATGTCAAATGCTTTCCAGTTTGAATTTTGTTTTGGATTTACTTCATCATTTGTTGTTATCGTGGTACTTTACTGCATTTGACATGTTTGTGCCTCTGTTTGCCTGAGAAAGAAAAGAACACACAAACATACCCTCCATCTTTCTCAATTTTAACTTGATGCAACTACCGTAGGGGAAGAAGGTGAGATCTTTTCATCTTGTAGCTATCCATTTTAAACATTATTTCCTTCCTCCGACTAGTAACTATTTAGTCCTCTAAAGCTCTGAGGATTTTGGTTATGTAGTGGTGATTATACCAAAGCAGAAGGTATGATGATTATTCAGAATGGAAGGAATAATGTGCAAGTAGAAGGTATGTTTATCATTTTGATCGCATGAATGTCTACCTAAAGCTTATCATCATGACCTCTCACAAAAATGTAAAAACAGTTACTTTGGACATAATATCAGATAGTTTCATATCATAATATAATGTTAACTATTACCATTTACAAT</gDNA_template>
            <first_frame> L  P  L  L  V  C  F  E  K  Y  R  E  G  L  A  V  S  T  L  K  H  F  F  M  R  *  G  I  S  L  N  D  I  M  K  C  Q  L  Q  L  H  L  G :   Y  S  A  V  K  K  K  M  S  R  R  Y  D  S  R  T  T  I  F  S  P  E  G  R  L  Y  Q  V  E  Y  A  M  E  A  I  G  N  A  G  S  A  I  G  I  L  S  K  D  G  V  V  L  V  G  E  K  K  V  T  S  K  L  L  Q  T  S  T  S  S  E  K  M  Y  K  I  D  D  H  V  A  C  A  V  A  G  I  M  S  D  A  N  I  L  I  N  T  A  R  F  Q  A  Q  R  Y  T  F  A  Y  Q  E  P  M  P  V  E  Q  L  V  Q  S  L  C  D  T  K  Q  G  Y  T  Q  F  G  G  L  R  P  F  G  V  S  F  L  F  A  G  W  D  K  N  Y  G  F  Q  L  Y  M  S  D  P  S  G  N  Y  G  G  W  K  A  A  A  I  G  A  N  N  Q  A  A  Q  S  I  L  K  Q  D  Y  K  D  D  I  T  R  E  E  A  V  Q  L  A  L  K  V  L  G  K  T  M  D  S  T  S  L  T  S  E  K  L  E  L  A  E  V  F  L  S  N  G  K  V  K  Y  Q  A  C  S  P  E  T  L  N  K  M  L  V  S  A  G  L  T  Q  P  T  V  E  E  *  S  *  N  A  F  Q  S  S  I  *  H  H  *  T  L  S  T  P  C  V  T  C  C  T  K  T  K  W  W  I  C  L  L  T  T  A  C  I  F  M  S  N  A  F  Q  F  E  F  C  F  G  F  T  S  S  F  V  V  I  V  V  L  Y  C  I  *  H  V  C  A  S  V  C  L  R  K  K  R  T  H  K  H  T  L  H  L  S  Q  F  *  L  D  A  T  T  V  G  E  E  G  E  I  F  S  S  C  S  Y  P  F  *  T  L  F  P  S  S  D  *  *  L  F  S  P  L  K  L  *  G  F  W  L  C  S  G  D  Y  T  K  A  E  G  M  M  I  I  Q  N  G  R  N  N  V  Q  V  E  G  M  F  I  I  L  I  A  *  M  S  T  *  S  L  S  S  *  P  L  T  K  M  *  K  Q  L  L  W  T  *  Y  Q  I  V  S  Y  H  N  I  M  L  T  I  T  I  Y  N </first_frame>
            <second_frame>  C  P  C  *  F  V  L  R  S  T  G  K  G  *  Q  L  A  L  *  N  I  F  L  *  D  K  E  F  H  *  M  T  S  *  S  V  S  S  N  F  I  L   : G  I  L  Q  *  R  K  K  C  H  E  G  M  I  A  E  Q  Q  S  S  P  Q  K  V  V  S  T  K  L  S  T  Q  W  R  L  L  E  M  Q  V  V  L  *  A  S  C  P  R  M  G  W  C  W  *  V  K  R  K  L  H  L  S  C  F  R  P  L  L  Q  V  R  R  C  T  R  S  M  I  M  W  H  A  L  *  L  E  L  C  L  M  P  T  F  *  S  T  Q  P  G  F  R  L  S  A  I  R  S  L  I  K  N  P  C  Q  L  S  N  L  S  S  H  Y  V  I  P  S  K  V  T  H  S  L  V  G  F  A  L  L  V  F  H  F  S  L  Q  V  G  I  K  T  M  A  S  N  F  T  *  A  T  Q  V  E  I  T  V  V  G  K  P  Q  Q  L  E  Q  T  T  R  Q  L  N  Q  F  L  S  R  I  T  R  M  I  S  Q  G  K  R  P  F  N  L  L  L  K  C  L  V  R  Q  W  T  A  L  A  S  L  R  R  N  L  N  L  L  R  Y  F  S  L  T  G  K  S  S  I  K  H  A  L  P  K  L  *  T  K  C  W  *  V  L  D  *  L  N  L  Q  *  K  N  S  R  R  M  P  S  N  L  A  Y  D  I  I  E  L  S  L  R  H  V  *  H  V  V  L  K  L  S  G  G  F  V  F  L  Q  L  H  A  Y  L  C  Q  M  L  S  S  L  N  F  V  L  D  L  L  H  H  L  L  L  S  W  Y  F  T  A  F  D  M  F  V  P  L  F  A  *  E  R  K  E  H  T  N  I  P  S  I  F  L  N  F  N  L  M  Q  L  P  *  G  K  K  V  R  S  F  H  L  V  A  I  H  F  K  H  Y  F  L  P  P  T  S  N  Y  L  V  L  *  S  S  E  D  F  G  Y  V  V  V  I  I  P  K  Q  K  V  *  *  L  F  R  M  E  G  I  M  C  K  *  K  V  C  L  S  F  *  S  H  E  C  L  P  K  A  Y  H  H  D  L  S  Q  K  C  K  N  S  Y  F  G  H  N  I  R  *  F  H  I  I  I  *  C  *  L  L  P  F  T   </second_frame>
            <third_frame>   A  P  V  S  L  F  *  E  V  Q  G  R  V  S  S  *  H  S  E  T  F  F  Y  E  I  R  N  F  I  K  *  H  H  E  V  S  A  P  T  S  S  W  :  V  F  C  S  K  E  K  N  V  T  K  V  *  *  P  N  N  N  L  L  P  R  R  S  S  L  P  S  *  V  R  N  G  G  Y  W  K  C  R  *  C  Y  R  H  L  V  Q  G  W  G  G  V  G  R  *  K  E  S  Y  I  *  A  A  S  D  L  Y  F  K  *  E  D  V  Q  D  R  *  S  C  G  M  R  C  S  W  N  Y  V  *  C  Q  H  S  D  Q  H  S  Q  V  S  G  S  A  L  Y  V  R  L  S  R  T  H  A  S  *  A  T  C  P  V  T  M  *  Y  Q  A  R  L  H  T  V  W  W  A  S  P  F  W  C  F  I  S  L  C  R  L  G  *  K  L  W  L  P  T  L  H  E  R  P  K  W  K  L  R  W  L  E  S  R  S  N  W  S  K  Q  P  G  S  S  I  N  S  *  A  G  L  Q  G  *  Y  H  K  G  R  G  R  S  T  C  S  *  S  A  W  *  D  N  G  Q  H  *  P  H  F  G  E  T  *  T  C  *  G  I  S  L  *  R  E  S  Q  V  S  S  M  L  S  R  N  S  E  Q  N  V  G  E  C  W  T  D  S  T  Y  S  R  R  I  V  V  E  C  L  P  I  *  H  M  T  S  L  N  S  L  Y  A  M  C  D  M  L  Y  *  N  *  V  V  D  L  S  S  Y  N  C  M  H  I  Y  V  K  C  F  P  V  *  I  L  F  W  I  Y  F  I  I  C  C  Y  R  G  T  L  L  H  L  T  C  L  C  L  C  L  P  E  K  E  K  N  T  Q  T  Y  P  P  S  F  S  I  L  T  *  C  N  Y  R  R  G  R  R  *  D  L  F  I  L  *  L  S  I  L  N  I  I  S  F  L  R  L  V  T  I  *  S  S  K  A  L  R  I  L  V  M  *  W  *  L  Y  Q  S  R  R  Y  D  D  Y  S  E  W  K  E  *  C  A  S  R  R  Y  V  Y  H  F  D  R  M  N  V  Y  L  K  L  I  I  M  T  S  H  K  N  V  K  T  V  T  L  D  I  I  S  D  S  F  I  S  *  Y  N  V  N  Y  Y  H  L  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42684" stop="42733"/>
                    <exon start="43337" stop="44105"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>816</number_coding_nucleotides>
                  <number_encoded_amino_acids>272</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GISLNDIMKCQLQLHLGYSAVKKKMSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARFQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDDITREEAVQLALKVLGKTMDSTSLTSEKLELAEVFLSNGKVKYQACSPETLNKMLVSAGLTQPTVEE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="48143" PGL_stop="55218"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48143" e_stop="48528"/>
            <exon e_start="49734" e_stop="49823"/>
            <exon e_start="49952" e_stop="50085"/>
            <exon e_start="50182" e_stop="50352"/>
            <exon e_start="50650" e_stop="50775"/>
            <exon e_start="51973" e_stop="52052"/>
            <exon e_start="53117" e_stop="53315"/>
            <exon e_start="53812" e_stop="53919"/>
            <exon e_start="54584" e_stop="54650"/>
            <exon e_start="54838" e_stop="55218"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.770" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.815" acc_prob="0.787" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.674" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.678" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.940" e_score="0.970"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48143" e_stop="48528" e_length="386"/>
          </exon>
          <intron i_serial="1" don_prob="0.770" acc_prob="1.000">
            <gDNA_intron_boundary i_start="48529" i_stop="49733" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49734" e_stop="49823" e_length="90"/>
          </exon>
          <intron i_serial="2" don_prob="0.815" acc_prob="0.787">
            <gDNA_intron_boundary i_start="49824" i_stop="49951" i_length="128"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49952" e_stop="50085" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.970">
            <gDNA_intron_boundary i_start="50086" i_stop="50181" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="50182" e_stop="50352" e_length="171"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="50353" i_stop="50649" i_length="297"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="50650" e_stop="50775" e_length="126"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.674">
            <gDNA_intron_boundary i_start="50776" i_stop="51972" i_length="1197"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="51973" e_stop="52052" e_length="80"/>
          </exon>
          <intron i_serial="6" don_prob="0.941" acc_prob="0.999">
            <gDNA_intron_boundary i_start="52053" i_stop="53116" i_length="1064"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="53117" e_stop="53315" e_length="199"/>
          </exon>
          <intron i_serial="7" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="53316" i_stop="53811" i_length="496"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="53812" e_stop="53919" e_length="108"/>
          </exon>
          <intron i_serial="8" don_prob="0.939" acc_prob="0.678">
            <gDNA_intron_boundary i_start="53920" i_stop="54583" i_length="664"/>
          </intron>
          <exon e_serial="9" e_score="0.970">
            <gDNA_exon_boundary e_start="54584" e_stop="54650" e_length="67"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.940">
            <gDNA_intron_boundary i_start="54651" i_stop="54837" i_length="187"/>
          </intron>
          <exon e_serial="10" e_score="0.997">
            <gDNA_exon_boundary e_start="54838" e_stop="55218" e_length="381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48143" stop="48528"/>
              <exon start="49734" stop="49823"/>
              <exon start="49952" stop="50085"/>
              <exon start="50182" stop="50335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48149" stop="48528"/>
              <exon start="49734" stop="49823"/>
              <exon start="49952" stop="50085"/>
              <exon start="50182" stop="50270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321383" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48236" stop="48528"/>
              <exon start="49734" stop="49823"/>
              <exon start="49952" stop="50085"/>
              <exon start="50182" stop="50352"/>
              <exon start="50650" stop="50775"/>
              <exon start="51973" stop="52052"/>
              <exon start="53117" stop="53315"/>
              <exon start="53812" stop="53919"/>
              <exon start="54584" stop="54650"/>
              <exon start="54838" stop="55189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745652" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50235" stop="50352"/>
              <exon start="50650" stop="50775"/>
              <exon start="51973" stop="52052"/>
              <exon start="53117" stop="53315"/>
              <exon start="53812" stop="53919"/>
              <exon start="54584" stop="54640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692531" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52011" stop="52052"/>
              <exon start="53117" stop="53315"/>
              <exon start="53812" stop="53919"/>
              <exon start="54584" stop="54650"/>
              <exon start="54838" stop="55218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696371" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAACTGTACACGTGATGGTGGGCGTAGAACCATCAAACTGACACATGTTTTTTTTAAAAATAAATCAAAGAGATTAATTAGTGTACAAGAGAGAGGGAAGTATAAATTATTCTTGTTTGGATCATCCGCCCTTGAAGAATCTCAATCTCTTGGCAATGGGTGAAGAAAAATGGTGTGTGGTGACCGGCGGAAGAGGCTTTGCTGCTCGACATTTAGTCGAAATGCTCATCCGCTACGAAATTTATCATGTACGCATTGGTGATTTGGGGCCAACCATTAAACTTGAGCCTCATGAGGAAAAGGGTATTCTTGGAGAAGCCCTCAAATCTGGTCGTGCTGTATATGTATCCATGGATCTTCTTAACAAGTCCCAAGTGTTCAAAG : CTTGTGAAGGAGCTGAGGTTGTTTTCCACATGGCTGCTCCAGATTCATCGATCAACAACCACAAGCTCCACTATTCAGTTAATGTGCAAG : GAACCCAGAATATAATTGATGCTTGCGTTGAGCTGAAAGTGAAAAGACTTATTTACACCAGCTCTCCCAGTGTGGTGTTTGATGGAGTTACTGGAATTCTAGATGGGGATGAATCACTGCCATATCCTGCGAAG : CATAATGATTCCTACTCTGCAACTAAAGCTGAAGGAGAGGCACTTGTAATGAAGTCAAATGGTACTAAAGGCCTGCTGACATGCTGCATTAGACCTAGCAGTATTTTTGGCCCTGGTGATAGGTTGCTAGTTCCTTCACTAGTCGCGGCTGCAAGGGCTGGAAAATCTAAG : TTCATTATTGGCGACGGAAATAACCTGTATGATTTCACTTACGTGGAGAATGTGGCACATGCACATGTGTGTGCGGAACGAGCTCTAGCATCAGGAGGAACAGCAGCAGAGAAAGCTGCTGGGAAC : GCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAG : GCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTATCGTCACTCTTCAG : GAGGGCATAAGGAGGACCATTGAATCCTATCCACATCTGAGAGCTGAACACGGGTCGGGAAAGGATGGTCCTAAATCATCTGCATCTCTTAAACGGTTTTTCCTCCTG : GTGATTTTCTTTCTATTAATTCTAAGCGTACTTGGGATCATTTCACCATGGAGTTTTTTCGTCATAG : GAATCTTAGCTGCCTTTGTTGTGTTCTTGATATTTGACAAAAGCAAGAAGAATTAGATCATTTAGTTCATGCAGTATTTGGTCTAGCATTGATGGGAGAACATCCAACTCTTAATTAAAAAAAACAACGATGGGGCGTGCAGCATCATTCACTCATTGGAGCCTCACTTGAGAGAAGTTGTGTTTACATCCTGGAGTTGCTATATAGTAAGGTGCTTTTTACCAAGCCAGTTATTTTAGTTTTTGTTGTATTTGTTTATTTTGGTACATTGGTAAAGAGTACTAACTAAAAGTTTTTAAAACCTTTGATAAGCTACATAAGCTATCTATCGTAAGTTTCAAAAGTTTTCTTTATTTCTTAAACCTTGAGGAGTTCCTCATC</gDNA_template>
            <first_frame> R  N  C  T  R  D  G  G  R  R  T  I  K  L  T  H  V  F  F  K  N  K  S  K  R  L  I  S  V  Q  E  R  G  K  Y  K  L  F  L  F  G  S  S  A  L  E  E  S  Q  S  L  G  N  G  *  R  K  M  V  C  G  D  R  R  K  R  L  C  C  S  T  F  S  R  N  A  H  P  L  R  N  L  S  C  T  H  W  *  F  G  A  N  H  *  T  *  A  S  *  G  K  G  Y  S  W  R  S  P  Q  I  W  S  C  C  I  C  I  H  G  S  S  *  Q  V  P  S  V  Q  S :   L  *  R  S  *  G  C  F  P  H  G  C  S  R  F  I  D  Q  Q  P  Q  A  P  L  F  S  *  C  A  R :   N  P  E  Y  N  *  C  L  R  *  A  E  S  E  K  T  Y  L  H  Q  L  S  Q  C  G  V  *  W  S  Y  W  N  S  R  W  G  *  I  T  A  I  S  C  E   : A  *  *  F  L  L  C  N  *  S  *  R  R  G  T  C  N  E  V  K  W  Y  *  R  P  A  D  M  L  H  *  T  *  Q  Y  F  W  P  W  *  *  V  A  S  S  F  T  S  R  G  C  K  G  W  K  I  *   : V  H  Y  W  R  R  K  *  P  V  *  F  H  L  R  G  E  C  G  T  C  T  C  V  C  G  T  S  S  S  I  R  R  N  S  S  R  E  S  C  W  E   : R  L  F  H  H  K  H  G  V  H  *  V  L  G  V  R  I  T  Y  S  *  R  S  W  L  *  Q  :  A  K  Y  *  D  S  C  T  C  Y  D  A  N  C  T  F  G  G  T  D  L  *  A  V  S  T  L  W  N  E  G  P  T  V  D  S  F  E  N  K  T  S  L  Y  E  Q  N  I  *  *  F  K  S  K  *  P  T  R  I  R  T  Y  R  H  S  S   : G  G  H  K  E  D  H  *  I  L  S  T  S  E  S  *  T  R  V  G  K  G  W  S  *  I  I  C  I  S  *  T  V  F  P  P   : G  D  F  L  S  I  N  S  K  R  T  W  D  H  F  T  M  E  F  F  R  H  R :   N  L  S  C  L  C  C  V  L  D  I  *  Q  K  Q  E  E  L  D  H  L  V  H  A  V  F  G  L  A  L  M  G  E  H  P  T  L  N  *  K  K  Q  R  W  G  V  Q  H  H  S  L  I  G  A  S  L  E  R  S  C  V  Y  I  L  E  L  L  Y  S  K  V  L  F  T  K  P  V  I  L  V  F  V  V  F  V  Y  F  G  T  L  V  K  S  T  N  *  K  F  L  K  P  L  I  S  Y  I  S  Y  L  S  *  V  S  K  V  F  F  I  S  *  T  L  R  S  S  S   </first_frame>
            <second_frame>  E  T  V  H  V  M  V  G  V  E  P  S  N  *  H  M  F  F  L  K  I  N  Q  R  D  *  L  V  Y  K  R  E  G  S  I  N  Y  S  C  L  D  H  P  P  L  K  N  L  N  L  L  A  M  G  E  E  K  W  C  V  V  T  G  G  R  G  F  A  A  R  H  L  V  E  M  L  I  R  Y  E  I  Y  H  V  R  I  G  D  L  G  P  T  I  K  L  E  P  H  E  E  K  G  I  L  G  E  A  L  K  S  G  R  A  V  Y  V  S  M  D  L  L  N  K  S  Q  V  F  K   : A  C  E  G  A  E  V  V  F  H  M  A  A  P  D  S  S  I  N  N  H  K  L  H  Y  S  V  N  V  Q   : G  T  Q  N  I  I  D  A  C  V  E  L  K  V  K  R  L  I  Y  T  S  S  P  S  V  V  F  D  G  V  T  G  I  L  D  G  D  E  S  L  P  Y  P  A  K  :  H  N  D  S  Y  S  A  T  K  A  E  G  E  A  L  V  M  K  S  N  G  T  K  G  L  L  T  C  C  I  R  P  S  S  I  F  G  P  G  D  R  L  L  V  P  S  L  V  A  A  A  R  A  G  K  S  K  :  F  I  I  G  D  G  N  N  L  Y  D  F  T  Y  V  E  N  V  A  H  A  H  V  C  A  E  R  A  L  A  S  G  G  T  A  A  E  K  A  A  G  N  :  A  Y  F  I  T  N  T  E  S  I  K  F  W  E  F  V  S  L  I  L  E  G  L  G  Y  D  R :   P  S  I  K  I  P  A  P  V  M  M  P  I  A  H  L  V  E  L  T  Y  K  L  L  A  P  Y  G  M  K  V  P  Q  L  T  P  S  R  I  R  L  L  S  M  S  R  T  F  S  S  S  K  A  S  D  Q  L  G  Y  A  P  I  V  T  L  Q  :  E  G  I  R  R  T  I  E  S  Y  P  H  L  R  A  E  H  G  S  G  K  D  G  P  K  S  S  A  S  L  K  R  F  F  L  L  :  V  I  F  F  L  L  I  L  S  V  L  G  I  I  S  P  W  S  F  F  V  I   : G  I  L  A  A  F  V  V  F  L  I  F  D  K  S  K  K  N  *  I  I  *  F  M  Q  Y  L  V  *  H  *  W  E  N  I  Q  L  L  I  K  K  N  N  D  G  A  C  S  I  I  H  S  L  E  P  H  L  R  E  V  V  F  T  S  W  S  C  Y  I  V  R  C  F  L  P  S  Q  L  F  *  F  L  L  Y  L  F  I  L  V  H  W  *  R  V  L  T  K  S  F  *  N  L  *  *  A  T  *  A  I  Y  R  K  F  Q  K  F  S  L  F  L  K  P  *  G  V  P  H  </second_frame>
            <third_frame>   K  L  Y  T  *  W  W  A  *  N  H  Q  T  D  T  C  F  F  *  K  *  I  K  E  I  N  *  C  T  R  E  R  E  V  *  I  I  L  V  W  I  I  R  P  *  R  I  S  I  S  W  Q  W  V  K  K  N  G  V  W  *  P  A  E  E  A  L  L  L  D  I  *  S  K  C  S  S  A  T  K  F  I  M  Y  A  L  V  I  W  G  Q  P  L  N  L  S  L  M  R  K  R  V  F  L  E  K  P  S  N  L  V  V  L  Y  M  Y  P  W  I  F  L  T  S  P  K  C  S  K  :  L  V  K  E  L  R  L  F  S  T  W  L  L  Q  I  H  R  S  T  T  T  S  S  T  I  Q  L  M  C  K  :  E  P  R  I  *  L  M  L  A  L  S  *  K  *  K  D  L  F  T  P  A  L  P  V  W  C  L  M  E  L  L  E  F  *  M  G  M  N  H  C  H  I  L  R  S :   I  M  I  P  T  L  Q  L  K  L  K  E  R  H  L  *  *  S  Q  M  V  L  K  A  C  *  H  A  A  L  D  L  A  V  F  L  A  L  V  I  G  C  *  F  L  H  *  S  R  L  Q  G  L  E  N  L  S :   S  L  L  A  T  E  I  T  C  M  I  S  L  T  W  R  M  W  H  M  H  M  C  V  R  N  E  L  *  H  Q  E  E  Q  Q  Q  R  K  L  L  G  T :   L  I  S  S  Q  T  R  S  P  L  S  F  G  S  S  Y  H  L  F  L  K  V  L  A  M  T   : G  Q  V  L  R  F  L  H  L  L  *  C  Q  L  H  I  W  W  N  *  L  I  S  C  *  H  L  M  E  *  R  S  H  S  *  L  L  R  E  *  D  F  S  L  *  A  E  H  L  V  V  Q  K  Q  V  T  N  *  D  T  H  L  S  S  L  F  R :   R  A  *  G  G  P  L  N  P  I  H  I  *  E  L  N  T  G  R  E  R  M  V  L  N  H  L  H  L  L  N  G  F  S  S  W :   *  F  S  F  Y  *  F  *  A  Y  L  G  S  F  H  H  G  V  F  S  S  *  :  E  S  *  L  P  L  L  C  S  *  Y  L  T  K  A  R  R  I  R  S  F  S  S  C  S  I  W  S  S  I  D  G  R  T  S  N  S  *  L  K  K  T  T  M  G  R  A  A  S  F  T  H  W  S  L  T  *  E  K  L  C  L  H  P  G  V  A  I  *  *  G  A  F  Y  Q  A  S  Y  F  S  F  C  C  I  C  L  F  W  Y  I  G  K  E  Y  *  L  K  V  F  K  T  F  D  K  L  H  K  L  S  I  V  S  F  K  S  F  L  Y  F  L  N  L  E  E  F  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48222" stop="48528"/>
                    <exon start="49734" stop="49823"/>
                    <exon start="49952" stop="50085"/>
                    <exon start="50182" stop="50352"/>
                    <exon start="50650" stop="50775"/>
                    <exon start="51973" stop="52052"/>
                    <exon start="53117" stop="53315"/>
                    <exon start="53812" stop="53919"/>
                    <exon start="54584" stop="54650"/>
                    <exon start="54838" stop="54893"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1335</number_coding_nucleotides>
                  <number_encoded_amino_acids>445</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVYKREGSINYSCLDHPPLKNLNLLAMGEEKWCVVTGGRGFAARHLVEMLIRYEIYHVRIGDLGPTIKLEPHEEKGILGEALKSGRAVYVSMDLLNKSQVFKACEGAEVVFHMAAPDSSINNHKLHYSVNVQGTQNIIDACVELKVKRLIYTSSPSVVFDGVTGILDGDESLPYPAKHNDSYSATKAEGEALVMKSNGTKGLLTCCIRPSSIFGPGDRLLVPSLVAAARAGKSKFIIGDGNNLYDFTYVENVAHAHVCAERALASGGTAAEKAAGNAYFITNTESIKFWEFVSLILEGLGYDRPSIKIPAPVMMPIAHLVELTYKLLAPYGMKVPQLTPSRIRLLSMSRTFSSSKASDQLGYAPIVTLQEGIRRTIESYPHLRAEHGSGKDGPKSSASLKRFFLLVIFFLLILSVLGIISPWSFFVIGILAAFVVFLIFDKSKKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="51419" e_stop="52052"/>
            <exon e_start="53117" e_stop="53315"/>
            <exon e_start="53812" e_stop="53919"/>
            <exon e_start="54584" e_stop="54650"/>
            <exon e_start="54838" e_stop="55218"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.999" e_score="0.998"/>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="0.989"/>
          <exon-intron don_prob="0.939" acc_prob="0.678" e_score="0.935"/>
          <exon-intron don_prob="0.999" acc_prob="0.940" e_score="0.940"/>
          <exon-only e_score="0.853"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="51419" e_stop="52052" e_length="634"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.999">
            <gDNA_intron_boundary i_start="52053" i_stop="53116" i_length="1064"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="53117" e_stop="53315" e_length="199"/>
          </exon>
          <intron i_serial="2" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="53316" i_stop="53811" i_length="496"/>
          </intron>
          <exon e_serial="3" e_score="0.935">
            <gDNA_exon_boundary e_start="53812" e_stop="53919" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.939" acc_prob="0.678">
            <gDNA_intron_boundary i_start="53920" i_stop="54583" i_length="664"/>
          </intron>
          <exon e_serial="4" e_score="0.940">
            <gDNA_exon_boundary e_start="54584" e_stop="54650" e_length="67"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.940">
            <gDNA_intron_boundary i_start="54651" i_stop="54837" i_length="187"/>
          </intron>
          <exon e_serial="5" e_score="0.853">
            <gDNA_exon_boundary e_start="54838" e_stop="55218" e_length="381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51419" stop="52052"/>
              <exon start="53117" stop="53207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51541" stop="52052"/>
              <exon start="53117" stop="53302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52011" stop="52052"/>
              <exon start="53117" stop="53315"/>
              <exon start="53812" stop="53919"/>
              <exon start="54584" stop="54650"/>
              <exon start="54838" stop="55218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696371" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGTTGTAGAGTTGTGCGCACAATCTAAGTGCTTACTGCTTACCTTTTGATAATTAAATTTACTTTACCATTTCAAAATAATTTGTTGCTTAAACCATATTATGTCAATAACTAGGAGGGGTAAGACTTGCGCATCCATTGCACTCGGGCCTATAGTTGTGCAGAAAACATTGAAATAAGAGCCACCTTGTCGGTTGTCCTTCTCTTTTTCTGGGAAGGAGGAACTCCACCATTGTGCGAAGTCATAATTCTCTCAGCAAGCATTCGAAAAAGGAATACCTCTCTTGTTTTCCATTTCTTTTGCTAGTAAAAAAGTATGATTTTCTTCTCCCCACTATCTCATCTCTCTGTGTTTCTCATATTTTAAGGTGTGGGGATTGGGGTAAAGCTAGATATCAAAATGATTGACATGCACTAAGCTTATGAGTATACATGTTTTCTTACATCTCCTGGAGTCCCCGTGAAAAAAAGTTCTGCTTGTTATGAGATTTATCAATTCTTGAACGCGGCTTTTTTTTTTGACAAATCTTTGATCAATAAATGATTTTTCCAGGCTTATTTCATCACAAACACGGAGTCCATTAAGTTTTGGGAGTTCGTATCACTTATTCTTGAAGGTCTTGGCTATGACAG : GCCAAGTATTAAGATTCCTGCACCTGTTATGATGCCAATTGCACATTTGGTGGAACTGACTTATAAGCTGTTAGCACCTTATGGAATGAAGGTCCCACAGTTGACTCCTTCGAGAATAAGACTTCTCTCTATGAGCAGAACATTTAGTAGTTCAAAAGCAAGTGACCAACTAGGATACGCACCTATCGTCACTCTTCAG : GAGGGCATAAGGAGGACCATTGAATCCTATCCACATCTGAGAGCTGAACACGGGTCGGGAAAGGATGGTCCTAAATCATCTGCATCTCTTAAACGGTTTTTCCTCCTG : GTGATTTTCTTTCTATTAATTCTAAGCGTACTTGGGATCATTTCACCATGGAGTTTTTTCGTCATAG : GAATCTTAGCTGCCTTTGTTGTGTTCTTGATATTTGACAAAAGCAAGAAGAATTAGATCATTTAGTTCATGCAGTATTTGGTCTAGCATTGATGGGAGAACATCCAACTCTTAATTAAAAAAAACAACGATGGGGCGTGCAGCATCATTCACTCATTGGAGCCTCACTTGAGAGAAGTTGTGTTTACATCCTGGAGTTGCTATATAGTAAGGTGCTTTTTACCAAGCCAGTTATTTTAGTTTTTGTTGTATTTGTTTATTTTGGTACATTGGTAAAGAGTACTAACTAAAAGTTTTTAAAACCTTTGATAAGCTACATAAGCTATCTATCGTAAGTTTCAAAAGTTTTCTTTATTTCTTAAACCTTGAGGAGTTCCTCATC</gDNA_template>
            <first_frame> F  V  V  E  L  C  A  Q  S  K  C  L  L  L  T  F  *  *  L  N  L  L  Y  H  F  K  I  I  C  C  L  N  H  I  M  S  I  T  R  R  G  K  T  C  A  S  I  A  L  G  P  I  V  V  Q  K  T  L  K  *  E  P  P  C  R  L  S  F  S  F  S  G  K  E  E  L  H  H  C  A  K  S  *  F  S  Q  Q  A  F  E  K  G  I  P  L  L  F  S  I  S  F  A  S  K  K  V  *  F  S  S  P  H  Y  L  I  S  L  C  F  S  Y  F  K  V  W  G  L  G  *  S  *  I  S  K  *  L  T  C  T  K  L  M  S  I  H  V  F  L  H  L  L  E  S  P  *  K  K  V  L  L  V  M  R  F  I  N  S  *  T  R  L  F  F  L  T  N  L  *  S  I  N  D  F  S  R  L  I  S  S  Q  T  R  S  P  L  S  F  G  S  S  Y  H  L  F  L  K  V  L  A  M  T   : G  Q  V  L  R  F  L  H  L  L  *  C  Q  L  H  I  W  W  N  *  L  I  S  C  *  H  L  M  E  *  R  S  H  S  *  L  L  R  E  *  D  F  S  L  *  A  E  H  L  V  V  Q  K  Q  V  T  N  *  D  T  H  L  S  S  L  F  R :   R  A  *  G  G  P  L  N  P  I  H  I  *  E  L  N  T  G  R  E  R  M  V  L  N  H  L  H  L  L  N  G  F  S  S  W :   *  F  S  F  Y  *  F  *  A  Y  L  G  S  F  H  H  G  V  F  S  S  *  :  E  S  *  L  P  L  L  C  S  *  Y  L  T  K  A  R  R  I  R  S  F  S  S  C  S  I  W  S  S  I  D  G  R  T  S  N  S  *  L  K  K  T  T  M  G  R  A  A  S  F  T  H  W  S  L  T  *  E  K  L  C  L  H  P  G  V  A  I  *  *  G  A  F  Y  Q  A  S  Y  F  S  F  C  C  I  C  L  F  W  Y  I  G  K  E  Y  *  L  K  V  F  K  T  F  D  K  L  H  K  L  S  I  V  S  F  K  S  F  L  Y  F  L  N  L  E  E  F  L  I </first_frame>
            <second_frame>  L  L  *  S  C  A  H  N  L  S  A  Y  C  L  P  F  D  N  *  I  Y  F  T  I  S  K  *  F  V  A  *  T  I  L  C  Q  *  L  G  G  V  R  L  A  H  P  L  H  S  G  L  *  L  C  R  K  H  *  N  K  S  H  L  V  G  C  P  S  L  F  L  G  R  R  N  S  T  I  V  R  S  H  N  S  L  S  K  H  S  K  K  E  Y  L  S  C  F  P  F  L  L  L  V  K  K  Y  D  F  L  L  P  T  I  S  S  L  C  V  S  H  I  L  R  C  G  D  W  G  K  A  R  Y  Q  N  D  *  H  A  L  S  L  *  V  Y  M  F  S  Y  I  S  W  S  P  R  E  K  K  F  C  L  L  *  D  L  S  I  L  E  R  G  F  F  F  *  Q  I  F  D  Q  *  M  I  F  P  G  L  F  H  H  K  H  G  V  H  *  V  L  G  V  R  I  T  Y  S  *  R  S  W  L  *  Q  :  A  K  Y  *  D  S  C  T  C  Y  D  A  N  C  T  F  G  G  T  D  L  *  A  V  S  T  L  W  N  E  G  P  T  V  D  S  F  E  N  K  T  S  L  Y  E  Q  N  I  *  *  F  K  S  K  *  P  T  R  I  R  T  Y  R  H  S  S   : G  G  H  K  E  D  H  *  I  L  S  T  S  E  S  *  T  R  V  G  K  G  W  S  *  I  I  C  I  S  *  T  V  F  P  P   : G  D  F  L  S  I  N  S  K  R  T  W  D  H  F  T  M  E  F  F  R  H  R :   N  L  S  C  L  C  C  V  L  D  I  *  Q  K  Q  E  E  L  D  H  L  V  H  A  V  F  G  L  A  L  M  G  E  H  P  T  L  N  *  K  K  Q  R  W  G  V  Q  H  H  S  L  I  G  A  S  L  E  R  S  C  V  Y  I  L  E  L  L  Y  S  K  V  L  F  T  K  P  V  I  L  V  F  V  V  F  V  Y  F  G  T  L  V  K  S  T  N  *  K  F  L  K  P  L  I  S  Y  I  S  Y  L  S  *  V  S  K  V  F  F  I  S  *  T  L  R  S  S  S   </second_frame>
            <third_frame>   C  C  R  V  V  R  T  I  *  V  L  T  A  Y  L  L  I  I  K  F  T  L  P  F  Q  N  N  L  L  L  K  P  Y  Y  V  N  N  *  E  G  *  D  L  R  I  H  C  T  R  A  Y  S  C  A  E  N  I  E  I  R  A  T  L  S  V  V  L  L  F  F  W  E  G  G  T  P  P  L  C  E  V  I  I  L  S  A  S  I  R  K  R  N  T  S  L  V  F  H  F  F  C  *  *  K  S  M  I  F  F  S  P  L  S  H  L  S  V  F  L  I  F  *  G  V  G  I  G  V  K  L  D  I  K  M  I  D  M  H  *  A  Y  E  Y  T  C  F  L  T  S  P  G  V  P  V  K  K  S  S  A  C  Y  E  I  Y  Q  F  L  N  A  A  F  F  F  D  K  S  L  I  N  K  *  F  F  Q  A  Y  F  I  T  N  T  E  S  I  K  F  W  E  F  V  S  L  I  L  E  G  L  G  Y  D  R :   P  S  I  K  I  P  A  P  V  M  M  P  I  A  H  L  V  E  L  T  Y  K  L  L  A  P  Y  G  M  K  V  P  Q  L  T  P  S  R  I  R  L  L  S  M  S  R  T  F  S  S  S  K  A  S  D  Q  L  G  Y  A  P  I  V  T  L  Q  :  E  G  I  R  R  T  I  E  S  Y  P  H  L  R  A  E  H  G  S  G  K  D  G  P  K  S  S  A  S  L  K  R  F  F  L  L  :  V  I  F  F  L  L  I  L  S  V  L  G  I  I  S  P  W  S  F  F  V  I   : G  I  L  A  A  F  V  V  F  L  I  F  D  K  S  K  K  N  *  I  I  *  F  M  Q  Y  L  V  *  H  *  W  E  N  I  Q  L  L  I  K  K  N  N  D  G  A  C  S  I  I  H  S  L  E  P  H  L  R  E  V  V  F  T  S  W  S  C  Y  I  V  R  C  F  L  P  S  Q  L  F  *  F  L  L  Y  L  F  I  L  V  H  W  *  R  V  L  T  K  S  F  *  N  L  *  *  A  T  *  A  I  Y  R  K  F  Q  K  F  S  L  F  L  K  P  *  G  V  P  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51964" stop="52052"/>
                    <exon start="53117" stop="53315"/>
                    <exon start="53812" stop="53919"/>
                    <exon start="54584" stop="54650"/>
                    <exon start="54838" stop="54893"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFQAYFITNTESIKFWEFVSLILEGLGYDRPSIKIPAPVMMPIAHLVELTYKLLAPYGMKVPQLTPSRIRLLSMSRTFSSSKASDQLGYAPIVTLQEGIRRTIESYPHLRAEHGSGKDGPKSSASLKRFFLLVIFFLLILSVLGIISPWSFFVIGILAAFVVFLIFDKSKKN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51594" stop="51827"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKSHLVGCPSLFLGRRNSTIVRSHNSLSKHSKKEYLSCFPFLLLVKKYDFLLPTISSLCVSHILRCGDWGKARYQND*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="59428" PGL_stop="61111"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59428" e_stop="59496"/>
            <exon e_start="60146" e_stop="60251"/>
            <exon e_start="60568" e_stop="61111"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.882" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.843" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59428" e_stop="59496" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.882" acc_prob="0.000">
            <gDNA_intron_boundary i_start="59497" i_stop="60145" i_length="649"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="60146" e_stop="60251" e_length="106"/>
          </exon>
          <intron i_serial="2" don_prob="0.915" acc_prob="0.843">
            <gDNA_intron_boundary i_start="60252" i_stop="60567" i_length="316"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="60568" e_stop="61111" e_length="544"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59428" stop="59496"/>
              <exon start="60146" stop="60251"/>
              <exon start="60568" stop="61078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59435" stop="59496"/>
              <exon start="60146" stop="60251"/>
              <exon start="60568" stop="61111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377514" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGAATACGAGGCCAAAAACTTGTTGAGATTTTCAGTAGCTGGTGATAAGCAAGTAAACATATTTCAG : GATTGTGGATTATCTGCTGCTTCCACCTTGGTTTCTTCTCTTCCTTCATCAATCAGAAGTGAGATGGCCATGAAACTTGGAGAAAAGAGAATTCTGGATGACTCTG : GTAGAGTTAGACAACAAATAGTGATTGGTTCAAAAGAACAGGCTGCTGAGTGCATGCAGAGGCTAGTTAGACGAAAGGTTATGTTTTCTAGCACAAGGCAGGCTGTTGCAGGTTTATTGACTGCTGGTGCTGTTCATGGAGTCAGATATGTAGCAAACAAGATGCGCAAGGCTTGGAAATCTTGGGTGTAATTGTTTCCTGTTTTTGGGTGACATCACGTCTTTTAACTGGTTCAGACATGGGGATATAGCCACAACCACAGTTACACCTAATGACATGCGGTTCAACCATGGAGTTCTTAGCATGGATAGAGTTTGCCGACTCTCCTGCTGCTTTTTCAAAATAAGACAAATAGAATTTGAGGGGGGAAATAACCAACAACCCATCAAAAAATTTCTTCTGAAAGTTTTCTGTTCACTTGTATTCTTTTCTTTTATTTATTTCAAAGGTGGGAAGAGTTCTTCAGGGAAGGTCGAGCTGTTGTATGTTTAGAACATCCTGGTGAAAAGAAGTTAATCAATGTTTCTAAACAAGGAATTGCTAT</gDNA_template>
            <first_frame> E  E  Y  E  A  K  N  L  L  R  F  S  V  A  G  D  K  Q  V  N  I  F  Q  :  D  C  G  L  S  A  A  S  T  L  V  S  S  L  P  S  S  I  R  S  E  M  A  M  K  L  G  E  K  R  I  L  D  D  S   : G  R  V  R  Q  Q  I  V  I  G  S  K  E  Q  A  A  E  C  M  Q  R  L  V  R  R  K  V  M  F  S  S  T  R  Q  A  V  A  G  L  L  T  A  G  A  V  H  G  V  R  Y  V  A  N  K  M  R  K  A  W  K  S  W  V  *  L  F  P  V  F  G  *  H  H  V  F  *  L  V  Q  T  W  G  Y  S  H  N  H  S  Y  T  *  *  H  A  V  Q  P  W  S  S  *  H  G  *  S  L  P  T  L  L  L  L  F  Q  N  K  T  N  R  I  *  G  G  K  *  P  T  T  H  Q  K  I  S  S  E  S  F  L  F  T  C  I  L  F  F  Y  L  F  Q  R  W  E  E  F  F  R  E  G  R  A  V  V  C  L  E  H  P  G  E  K  K  L  I  N  V  S  K  Q  G  I  A   </first_frame>
            <second_frame>  K  N  T  R  P  K  T  C  *  D  F  Q  *  L  V  I  S  K  *  T  Y  F  R :   I  V  D  Y  L  L  L  P  P  W  F  L  L  F  L  H  Q  S  E  V  R  W  P  *  N  L  E  K  R  E  F  W  M  T  L  :  V  E  L  D  N  K  *  *  L  V  Q  K  N  R  L  L  S  A  C  R  G  *  L  D  E  R  L  C  F  L  A  Q  G  R  L  L  Q  V  Y  *  L  L  V  L  F  M  E  S  D  M  *  Q  T  R  C  A  R  L  G  N  L  G  C  N  C  F  L  F  L  G  D  I  T  S  F  N  W  F  R  H  G  D  I  A  T  T  T  V  T  P  N  D  M  R  F  N  H  G  V  L  S  M  D  R  V  C  R  L  S  C  C  F  F  K  I  R  Q  I  E  F  E  G  G  N  N  Q  Q  P  I  K  K  F  L  L  K  V  F  C  S  L  V  F  F  S  F  I  Y  F  K  G  G  K  S  S  S  G  K  V  E  L  L  Y  V  *  N  I  L  V  K  R  S  *  S  M  F  L  N  K  E  L  L  </second_frame>
            <third_frame>   R  I  R  G  Q  K  L  V  E  I  F  S  S  W  *  *  A  S  K  H  I  S   : G  L  W  I  I  C  C  F  H  L  G  F  F  S  S  F  I  N  Q  K  *  D  G  H  E  T  W  R  K  E  N  S  G  *  L  W :   *  S  *  T  T  N  S  D  W  F  K  R  T  G  C  *  V  H  A  E  A  S  *  T  K  G  Y  V  F  *  H  K  A  G  C  C  R  F  I  D  C  W  C  C  S  W  S  Q  I  C  S  K  Q  D  A  Q  G  L  E  I  L  G  V  I  V  S  C  F  W  V  T  S  R  L  L  T  G  S  D  M  G  I  *  P  Q  P  Q  L  H  L  M  T  C  G  S  T  M  E  F  L  A  W  I  E  F  A  D  S  P  A  A  F  S  K  *  D  K  *  N  L  R  G  E  I  T  N  N  P  S  K  N  F  F  *  K  F  S  V  H  L  Y  S  F  L  L  F  I  S  K  V  G  R  V  L  Q  G  R  S  S  C  C  M  F  R  T  S  W  *  K  E  V  N  Q  C  F  *  T  R  N  C  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59428" stop="59496"/>
                    <exon start="60146" stop="60251"/>
                    <exon start="60568" stop="60758"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEYEAKNLLRFSVAGDKQVNIFQDCGLSAASTLVSSLPSSIRSEMAMKLGEKRILDDSGRVRQQIVIGSKEQAAECMQRLVRRKVMFSSTRQAVAGLLTAGAVHGVRYVANKMRKAWKSWV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0075D08.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60721" stop="61059"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTRCARLGNLGCNCFLFLGDITSFNWFRHGDIATTTVTPNDMRFNHGVLSMDRVCRLSCCFFKIRQIEFEGGNNQQPIKKFLLKVFCSLVFFSFIYFKGGKSSSGKVELLYV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 110 chains have been computed
$ 
$ memory statistics:
$ 203824 bytes spliced alignments in total
$ 86 spliced alignments have been stored
$ 2370 bytes was the average size of a spliced alignment
$ 21064 bytes predicted gene locations in total
$ 11 predicted gene locations have been stored
$ 1914 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 115 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 01:36:43
-->
