<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:25:26"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581350" ref_strand="+" ref_description="SGN-U581350 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|224927|prf||1204205B (e_value=6e-129) protein 1B,chlorophyll binding; (*ATH) AT1G29930.1 (e_value=6e-118)  Symbol: None | chlorophyll A-B binding protein 2, chloroplast / LHCII type I CAB-2 / CAB-140 (CAB2B), identical to SP:P04778 Chlorophyll A-B binding protein 2, chloroplast precursor (LHCII type I CAB-2) (CAB-140) (LHCP) {Arabidopsis thaliana} | chr1... ; (*SWP) sp|P07370|CB2B_SOLLC (e_value=4e-130) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>gcaaacttcaaaagtttaccatcaaacacttacttttctcttgatataaacacaatggcagctgctacaatggctctttcttccccttcttttgctggacaggcggtgaaactctcaccctctgcctcagaaatctctggaaatggaaggatcactatgagaaaggctgtcgccaagtctgccccatctagcagcccatggtatggccctgaccgtgttaagtacttgggcccattctctggtgaatccccaagctacttgaccggtgaattccctggtgactatggatgggacactgctggactttcagcagaccctgagacctttgccaagaaccgtgaactcgaggtgatccactgcagatgggctatgcttggtgctcttggatgtgtctttcctgagctcttggcccgcaacggtgtaaagtttggtgaggctgtgtggttcaaggccggatcccagatcttcagccacaaagcatcttgaccacttgggcttgccaagttgtgttgatgggagctgttgaaggttaccgtattgctggtggacctcttggtgaggttgtcgacccactctacccaggtggaagcttcgacccattaggccttgctgaagacccagaggcatttgctgagctcaaggtaaaggagatcaagaacggtagacttgctatgttctctatgtttggattctttgttcaagccattgttaccggaaaaggtccattggagaaccttgctgatcaccttgcagacccagtaaacaacaacgcctgggccttcgccacaaactttgttcccggaaagtgaataccataaaatgatttttaaattttcatgtaaagttgttgtgaattgagttgacaatataatggatttttctattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="4542" stop="3014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4242" g_stop="3772" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="471" r_length="471" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3771" i_stop="3722" i_length="50">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.63"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3721" g_stop="3314" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="887" r_length="416" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U581350" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>879</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4242" e_stop="3772"/>
          <exon e_start="3721" e_stop="3314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACTTCAAAAGTTTACCATCAAACACTTACTTTTCTCTTGATATAAACACAATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAATCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTATGGATGGGACACTGCTGGACTTTCAGCAGACCCTGAGACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGTAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTAAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTTCATGCACAAAG-------CATCTTGGCCATTTGGGCTTGCCAAGTTGTGTTGATGGGAGCTGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCAGGTGGAAGCTTCGACCCATTAGGCCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGGTAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACCGGAAAAGGTCCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGGCCTTCGCCACAAACTTTGTTCCCGGAAAGTGAATACCATAAAATGATTTTTAAATTTTCATGTAAAGTTGTTGTGAA-TGAGTTGACAATATAATGGATTTTTCTATTCC</genome_strand>
        <mrna_strand>GCAAACTTCAAAAGTTTACCATCAAACACTTACTTTTCTCTTGATATAAACACAATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAATCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTATGGATGGGACACTGCTGGACTTTCAGCAGACCCTGAGACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTAAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGC..................................................CACAAAGCATCTTGACCACTTGGGCTTGCCAAGTTGTGTTGATGGGAGCTGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCAGGTGGAAGCTTCGACCCATTAGGCCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGGTAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACCGGAAAAGGTCCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGGCCTTCGCCACAAACTTTGTTCCCGGAAAGTGAATACCATAAAATGATTTTTAAATTTTCATGTAAAGTTGTTGTGAATTGAGTTGACAATATAATGGATTTTTCTATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592907" ref_strand="+" ref_description="SGN-U592907 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|224927|prf||1204205B (e_value=1e-46) protein 1B,chlorophyll binding; (*ATH) AT2G34430.1 (e_value=2e-43) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=8e-48) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>caaacttcaaaagtttaccatcaaacacttacttttctctggatagaaacacaatggcagctgcccccccggctctttcttccccttcttttgctggacaggcggtgaaactctcaccctctgcctcagaaatctctggaaatggaaggatcactatgagaaaggctgtcgccaagtctgccccatctagcagcccatggtatggccctgaccgtgttaagtacttgggcccattctctggtgaatccccaagttacttgaccggtgaattccctggtgactatggatgggacactgctggactttcagcagaccctgagacctttgccaagaaccgtgaactcgaggtgatccactgcagatgggctatgcttggtgctctgggatgtgtctttccctgagctcttggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="4541" stop="3532"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4241" g_stop="3832" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U592907" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U592907" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4241" e_stop="3832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACTTCAAAAGTTTACCATCAAACACTTACTTTTCTCTTGATATAAACACAATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAATCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTATGGATGGGACACTGCTGGACTTTCAGCAGACCCTGAGACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGTAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTT-CCTGAGCTCTTGGCC</genome_strand>
        <mrna_strand>CAAACTTCAAAAGTTTACCATCAAACACTTACTTTTCTCTGGATAGAAACACAATGGCAGCTGCCCCCCCGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAATCCCCAAGTTACTTGACCGGTGAATTCCCTGGTGACTATGGATGGGACACTGCTGGACTTTCAGCAGACCCTGAGACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTGGGATGTGTCTTTCCCTGAGCTCTTGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580356" ref_strand="+" ref_description="SGN-U580356 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|693922|gb|AAA80594.1| (e_value=2e-64) chlorophyll a/b binding protein; (*ATH) AT3G27690.1 (e_value=2e-59)  Symbol: None | chlorophyll A-B binding protein (LHCB2:4), nearly identical to Lhcb2 protein (Arabidopsis thaliana) GI:4741950; similar to chlorophyll A-B binding protein 151 precursor (LHCP) GB:P27518 from (Gossypium hirsutum); contains Pfam PF00504... ; (*SWP) sp|P27492|CB21_TOBAC (e_value=2e-65) Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16; ">
      <seq>aagattttctctttattgcttttttcgttgggcaacccaagcttggtccatgcacagagcatattggccatctgggcttgccaagttgtactcatgggagccgttgaaggttaccgtattgctggtggacctcttggtgaggttgtagacccactctacccaggtggcagcttcgacccattaggccttgctgaagaccctgaggcatttgctgagctcaaggtaaaggagattaagaacggtagacttgctatgttctctatgtttggattctttgttcaagccattgttactggaaagggaccattggagaaccttgctgatcaccttgcagacccagtaaacaacaacgcctggtcttacgccacaaactttgtccccggaaaataaaaatcttaaaacattctcaagtttctgatcatttgttgaccatgtaaagttgtaatttgtgagtttacttgaacaatagaattgatttttcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="6497" stop="5438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6194" g_stop="5737" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="485" r_length="458" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U580356" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6194" e_stop="5737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGGCAACCCAAGCTTGGTCCATGCACAGAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTACTCATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTAGACCCACTCTACCCCGGTGGAAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGTAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAGGGACCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGTCCTACGCCACAAACTTTGTCCCCGGAAAATAAAAATCTTAAAACATTCTCAAGTTTCTGATCATTTGTTGACCATGTAAAGTTGTAATTTGTGAGTTAACTTGAACAATAGAATTGATTTTTCTTAC</genome_strand>
        <mrna_strand>TTGGGCAACCCAAGCTTGGTCCATGCACAGAGCATATTGGCCATCTGGGCTTGCCAAGTTGTACTCATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTAGACCCACTCTACCCAGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGTAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAGGGACCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGTCTTACGCCACAAACTTTGTCCCCGGAAAATAAAAATCTTAAAACATTCTCAAGTTTCTGATCATTTGTTGACCATGTAAAGTTGTAATTTGTGAGTTTACTTGAACAATAGAATTGATTTTTCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592342" ref_strand="+" ref_description="SGN-U592342 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|224928|prf||1204205C (e_value=8e-86) protein 1C,chlorophyll binding; (*ATH) AT2G34430.1 (e_value=7e-59) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=6e-64) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>gcttaattcttctcttaaaataaacacaaatggcagctgctacaatggctctttcttccccttcatttgctggacaggcagtcaaactctcaccatctgcctcagaaatttctggaaatggaaggatcactatgagaaaggctgttgccaagtccgccccatctagcaacccaagcttggtccatgcacaaagcatcttggccatctgggcttgccaagttgtgttgatgggagctgttgagggataccgtattgctggtggacctcttggtgaggttgtcgacccactctaccctggtggcagcttcgacccattaggccttgctgaagacccagaggcatttgctgagctcaaggtaaaggagatcaagaacggtagacttgctatgttctctatgtttggattctttgttcaagctattgtcaccggaaagggtccattggagaaccttgctgaccaccttgcagaccccgtaaacaacaatgcctgggctttcgccacaaactttgtccccggaaaatgaatctcttaaaacgttctcaagtctctggtcgtttgatgacagtgtaaagatgtagtgtgctacctgacaatataatgaaattttgttttgtgtttgaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="14136" stop="5464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11396" g_stop="11230" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.892"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11229" i_stop="8588" i_length="2642">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8587" g_stop="8373" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="383" r_length="215" r_score="0.963"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8372" i_stop="5973" i_length="2400">
            <donor d_prob="0.994" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5972" g_stop="5778" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="578" r_length="195" r_score="0.892"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U592342" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U592342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11396" e_stop="11230"/>
          <exon e_start="8587" e_stop="8373"/>
          <exon e_start="5972" e_stop="5778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCAACACTTTTCTCTTAATATAAA-TCATGGCAGCTGCTGCAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAAATTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGCGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTAAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAAGGTTACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCCGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCGATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCATTGGAAAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTCGCCACAAACTTTGTTCCCGGAAAATGAAAATCTTAAACATTCTTAAAATTTGATTGTTTGATGGCCTTGTAAAGTAGTTGTCAGTAATTACTTGACATTAGAATGGATTATTTTTTTTCAATATTCAAAATTTCCAATGATTGTGTAATCCTGAGTTACATTTTTCAAAGCCACGAATAAAAAATATTGCCACTTTTATACCAAAGGGTAGAAGAAAGAGACCAAAGAAAAAATAATTGAGAATTAAGATGTCGTAACTAGAAAAACTATATGCTGTTATAAGATTAAAACTTGAATTATGGAATTCAATTAATTCTGGATAAGCAATACTCAAAATTAGTGTAAAGTACTAATGTTGAACACCATGACGTTATTACATGATTCCTTATTTTTCTATCGAGAAGCGAAAGAGGAAATAAGAAGACATTGTTTCATTTCAATGCTAAGTGAAAACCAATGTGTTTAACATATGACTTTACAGGTCCTTGCATTATATGTCCTGTGAAAAAATTCATAAATTTCTTGAAAAATCATCCTTCATAACATTGATACCATCTTTAGATTAAAAGATCTTTCCAAACAAGGCGCATAGTAATGACCATAGCCAAAGCACATACTTGTATAGTTAGTTCGCAGAAGAGACAACATGACACTTATTGGCAACAAATTTAAGCTATGCACTGGTAATATAAAAATTATATACAATCAGTTTTACTTATAAAGTAATATATGTAAATCCGTTGATAACCATTACTCCAATGGTAGTCTCGTAAAAATAGGGAATTGACTTACTATCACATGTTAAATTTTATGGATACGGCAAAAACATCTTTATACTGTCAGTGTATATAACTTAAATCTACAATTAGTAAAAATATATTGTGGTGCTGATGAATTCTAACAAATTAACGTGTTTGTTCATGTTCTTCTGAATAAGCTCTTTCAGAGTTTCACCATTGCTCATGTAGCAGTTAAGTACTGGAACTAAGCCGCATTAAATCTGTAAACATGAATTAACAATGTCTTGAATGAGCATAAAACAAGATAGCATGTGTTGCTGACATAAACAACTTTGTCAATTGGGGTCTAATATGTTAATAAAGTTTCAATCACATTGTTTTCCAAACATAAACATGCATTATTAATTTCCCACAATTTATGCATCAAGGTGGTAATAAATTTAAACTTCTCCTCGAATTTCCTAAACCATAGTTCTACATCTTTTACCCTGCAGGTAGACAAAATCTATAGAAATGGCAAGTGGATAATGATAGGGATATCATATTGTAAGCTCAATATATCACAGGGTGGATTTCAATCCTTGTGGCAATATATGAGAGGACAATACTGAATGTGTCCCTTCTTGGAAAATTAATGAGTTGTAGATTCAAGTTGCTACAATATATGGGATCTTGATATCCAATGAGATCATATGTATAGATATCACTGGATAAGAGGATTCTCTCTCTCTAATTACCTCCTATATATTCTGAACCCCAACTACTTCAGCTTCATCACAACCAACTTTGACATTTCAAACACTCATCACTTTTCTCTTGTTATAAACCATGGCAGCTTCTACAATGGCTCTTTCTTCCCCTTCTTTTGTTGGGCAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCGTCTAGCAGCCCATGGTATGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAAACTTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGCGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATATAATGGATTTTTCTTATATTCCAACTATGGTGTAGTATATAATTCCATTTTCCAATTGCATGAATGAAATACTGCAAGATTCATATCAAAGGGGGAAAAAAGATGACTAAGCAAAAACAAAAAAGAAAAACCAATATACATTTGGAATGTGGTAAAAGCTTAAATCTTGAATATACAGACACAGGAACTTAAGGAATTCAATTTATCCTCAAGAATCAATAATAGTCTTAACTTAATGCCAAGAATAACATTGAACAACATGATGTTATTGACATGATTCCTAATTTTTCTATCTGAGAAGTGAGATGATTTAAGAGTACATAACAATTTTTCACTTCTACATCATTGACATTTCATTGATGAGAGAAAACCAATGCTGTGTGTTATGTAATCTGAACGTAGCAAGTAAAAGCATCTATGCAACTGCTTATATAACAGAGGCAGGTATCCTCCAAAGATGGCATATAGTAACGAGTAACGACCAGAGCCAAAATTAAGGAAATAGTAAGCAGAAGATACAAGAAACTAAGATATACATGACACTTATTATAAAGGAAAATAAGTTCTAAGCATTGACATTGTAAAAATGCTAATGCTCATGTCACTTATTAACAAGGGCAGGGGTAAGCTTCATCATGCATATTTGACAGAACCAATTAAGTAGTTTTGGTTCAAACAAATATATATAAGTGTTAAGAAACAAACAAATTAAATTGAGGAATTCATTTACTAGTAACTAAATGAAACATATACAGAATGTTCTATGACTATAAATGCCTCTTCATGACCATAAGATTTTTAAAAATCCATGCATGGACCTTGGTTGAAAGAGAATATGATATTCTGCATTGCCTTAATGTCGCCAAATGCTATAGTGACTCTTGGATGCAATGACATTATATCAAAGCTGCTAAATGTTTTTACGGAAAATCTTTTGTCATTGAATGTCTCTTTTGTTGTAGTGATATGTGTTAAAGAAATTCATCAACACAAATTAAATTTAGAATCTGTTTATCAGAATCCATAAAGTTCAAATCTTGATCCACATTTGCTTATGAAGTAAATAGAGGTTAAACATGAATTGATAATATGATAAAAATGAGTTTCAGCTTTTCCTCAATTTATTTAGTGAAGGCTTAACCATAGTTCTACATTGAATAAGCTTTAGTGCTGATAGATAAAATTTGGATAAATTCCAAATGGATAATGATAAGAGATATCAGTGTATTGTAAGCTCAACAAATCAGAGGGTAGAGTTCAATCCTTGTATCCACACATAGGAGGACAGTATTGGATGGGTCCCTTCAGTAAACATCTTAAAAAATTAGAAGGATTAGAGATTGTCAAGTTGCATTCATTGCTACACTTAGGATCTTGATATCCAATGAGATCATAGATATAGATATCATTAGATAATTTGGACTCTTTCCCTCTTAATTACTCCCTATATATATGGTGAATTAATTCCTTGTAACTTCATCTCATTACAGCCAACTTCAACAATATCTCATACCATCAAACACTTACATTTCTCTTGATATAAACACCATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAAGCAGTGAAACTCTTACCATCTGCCTCAGAAATCACAGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCAAAGTCAGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGTCCATTCTCTGGTGAGTCCCCTAGCTACTTGAATGGTGAATTCCCTGGTGACTACGGGTGGGACACCGCTGGACTTTCAGCAGATCCAGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGGTGTCAAGTTTGGTGAGGCTGTCTGGTTCAAGGCTGGATCTCAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAGAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTACTCATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTAGACCCACTCTACCCCGGTGGAAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGTAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAGGGACCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGTCCTACGCCACAAACTTTGTCCCCGGAAAATAAAAATCTTAAAACATTCTCAAGTTTCTGATCATTTGTTGACCATGTAAAGTTGTA</genome_strand>
        <mrna_strand>GCTTAATTCTTCTCTTAAAATAAACACAAATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAATTTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCCGCCCCATCTAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTGTTGATGGGAGCTGTTGAGGGATACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCTGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGGTAGACTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCTATTGTCACCGGAAAGGGTCCATTGGAGAACCTTGCTGACCACCTTGCAGACCCCGTAAACAACAATGCCTGGGCTTTCGCCACAAACTTTGTCCCCGGAAAATGAATCTCTTAAAACGTTCTCAAGTCTCTGGTCGTTTGATGACAGTGTAAAGATGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593292" ref_strand="+" ref_description="SGN-U593292 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157344623|emb|CAO70006.1| (e_value=2e-55) unnamed; (*ATH) AT2G34430.1 (e_value=4e-49) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=1e-50) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>ggccaagaaccgtgaacttgaggtgatccactgcagatggcctatgcttggtgctcttggatgtgtcttccctgagctattggcccgtaatggtgtcaagttcggtgaggctgtgtggttcaaggctggatcccagatcttcgacccattaggccttgctgaagacccggaggcatttgctgagcttaaggttaaggagatcaagaacggcagacttgctatgttctctatgtttgggttctttgttcaggccattgttaccggaaagggtccattggagaacctcgctgaccaccttgcggatccagttaataacaatgcctgggcctttgccacaaactttgttcctggaaaatgaatatcataaattgatggccttgtaaagttgtaattgtgagtttactagacaatataatggatttttcttatattccaactatggtgtagtatataattccattttccaattgcatgaatgaaatactgcaagattcatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="9056" stop="7791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8757" g_stop="8620" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8619" i_stop="8452" i_length="168">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8451" g_stop="8091" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="499" r_length="361" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U593292" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U593292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8757" e_stop="8620"/>
          <exon e_start="8451" e_stop="8091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGCGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATATAATGGATTTTTCTTATATTCCAACTATGGTGTAGTATATAATTCCATTTTCCAATTGCATGAATGAAATACTGCAAGATTCATATC</genome_strand>
        <mrna_strand>GGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGCCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGAT........................................................................................................................................................................CTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATATAATGGATTTTTCTTATATTCCAACTATGGTGTAGTATATAATTCCATTTTCCAATTGCATGAATGAAATACTGCAAGATTCATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577305" ref_strand="+" ref_description="SGN-U577305 Tomato 200607#2 [49 ESTs aligned] (*GB) gi|115819|sp|P07370|CB2B_SOLLC (e_value=3e-144) RecName:; (*ATH) AT2G34430.1 (e_value=2e-133) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=2e-145) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>gctttgacatttcaaacactcatcacttttctcttgttataaaccatggcagcttctacaatggctctttcttccccttcttttgctgggcaggcagtgaaactctcaccctctgcctcagaaatctctggaaatggaaggatcactatgagaaaggctgttgccaagtctgccccgtctagcagcccatggtatggaccagaccgtgttaagtacttaggcccattctctggtgagtccccaagctacttgaccggtgaattccctggtgactacggctgggataccgctggactttcagcagaccctgaaacttttgccaagaaccgtgaacttgaggtgatccactgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctattggcccgtaatggtgtcaagttcggtgaggctgtgtggttcaaggctggatcccagatcttcagcgagggtggacttgattacttgggcaacccaagcttggtccatgcacaaagcatcttggccatctgggcttgccaagttgtgttgatgggagccgttgagggataccgcattgctggtggacctcttggtgaggttgtcgacccactctaccccggtggcagcttcgacccattaggccttgctgaagacccggaggcatttgctgagcttaaggttaaggagatcaagaacggcagacttgctatgttctctatgtttgggttctttgttcaggccattgttaccggaaagggtccattggagaacctcgctgaccaccttgcggatccagttaataacaatgcctgggcctttgccacaaactttgttcctggaaaatgaatatcataaattgatggccttgtaaagttgtaattgtgagtttactagacaatataatggatttttcttatattccgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="9373" stop="7854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9074" g_stop="8153" g_length="922"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="922" r_length="922" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U577305" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>922</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9074" e_stop="8153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTGACATTTCAAACACTCATCACTTTTCTCTTGTTATAAACCATGGCAGCTTCTACAATGGCTCTTTCTTCCCCTTCTTTTGTTGGGCAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCGTCTAGCAGCCCATGGTATGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAAACTTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGCGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATATAATGGATTTTTCTTATATTCCAAC</genome_strand>
        <mrna_strand>GCTTTGACATTTCAAACACTCATCACTTTTCTCTTGTTATAAACCATGGCAGCTTCTACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGGCAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCGTCTAGCAGCCCATGGTATGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCAGACCCTGAAACTTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGCGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATATAATGGATTTTTCTTATATTCCGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590709" ref_strand="+" ref_description="SGN-U590709 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|224927|prf||1204205B (e_value=2e-115) protein 1B,chlorophyll binding; (*ATH) AT2G34430.1 (e_value=1e-106) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=1e-116) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>gctttgacatttcaaacactcatcacttttctcttgttataaaccatggcagcttctacaatggctctttcttccccttcttttgttgggcaggcagtgaaactctcaccctctgcctcagaaatctctggaaatggaaggatcactatgagaaaggctgttgccaagtctgccccgtctagcagcccatggtatggaccagaccgtgttaagtacttaggcccattctctggtgagtccccaagctacttgaccggtgaattccctggtgactacggctgggataccgctggactttcagctgaccctgaaacttttgccaagaaccgtgaacttgaggtgatccactgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctattggcccgtaatggtgtcaagttcggtgaggctgtgttgatgggagccgttgagggataccgcattgctggtggacctcttggtgaggttgtcgacccactctaccccggtggcagcttcgacccattaggccttgctgaagacccggaggcatttgctgagcttaaggttaaggagatcaagaacggcagacttgctatgttctctatgtttgggttctttgttcaggccattgttaccggaaagggtccattggagaacctcgctgaccaccttgcggatccagttaataacaatgcctgggcctttgccacaaactttgttcctgggaaatgaatatcataaattgatggccttgtaaaagttgaattgggagtttactaaacaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="9373" stop="7877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9074" g_stop="8646" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="429" r_length="429" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8645" i_stop="8535" i_length="111">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8534" g_stop="8177" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="787" r_length="358" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U590709" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>787</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9074" e_stop="8646"/>
          <exon e_start="8534" e_stop="8177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTGACATTTCAAACACTCATCACTTTTCTCTTGTTATAAACCATGGCAGCTTCTACAATGGCTCTTTCTTCCCCTTCTTTTGTTGGGCAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCGTCTAGCAGCCCATGGTATGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAAACTTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGCGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATAT</genome_strand>
        <mrna_strand>GCTTTGACATTTCAAACACTCATCACTTTTCTCTTGTTATAAACCATGGCAGCTTCTACAATGGCTCTTTCTTCCCCTTCTTTTGTTGGGCAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCGTCTAGCAGCCCATGGTATGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAAACTTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCT...............................................................................................................GTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGGAAATGAATATCATAAATTGATGGCCTTGTAAAAGTTGAATTGGGAGTTTACTAAACAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580431" ref_strand="+" ref_description="SGN-U580431 Tomato 200607#2 [112 ESTs aligned] (*GB) gi|115819|sp|P07370|CB2B_SOLLC (e_value=1e-139) RecName:; (*ATH) AT2G34430.1 (e_value=1e-128) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=8e-141) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>cgcagccttcaacaatatttaataccataaaatactcaacacttttctcttaatataaatcatggcagctgctgcaatggctctttcttccccttcatttgctggacaggcagtcaaactctcaccatctgcctcagaaaattctggaaatggaaggatcactatgagaaaggctgtcgccaagtctgccccatctagcagcccatggtatggccctgaccgtgttaagtacttgggaccattctctggtgagtccccaagctacttgactggcgaattccctggtgactacggctgggataccgctggactttcagctgaccctgagacctttgccaagaaccgtgaacttgaggtgatccactgcagatgggctatgcttggtgctcttggatgtgtctttcctgagctcttggcccgcaacggtgtaaagtttggtgaggctgtgtggttcaaggccggatcccagatcttcagcgagggtggacttgactacttgggcaacccaagcttggtccatgcacaaagcatcttggccatctgggcttgtcaagttgtgttgatgggagccgttgaaggttaccgcattgctggtggacctcttggtgaggttgtcgacccactctaccccggtggcagcttcgacccattaggccttgctgaagaccctgaggcatttgccgagctcaaggtaaaggagattaagaacggcagacttgctatgttctcgatgtttggattcttcgttcaagccattgttactggaaagggtccattggaaaaccttgctgaccaccttgcagaccccgttaacaacaacgcttgggctttcgccacaaactttgttcccggaaaatgaaaatcttaaacattcttaaaatttgattgtttgatggccttgtaaagtagttgtcagtaattacttgacattagaatggattattttttttcaatattcaaaatttccaatgattgtgtaatcctgagttacatttttcaaagccacgaataaaaaatattgccacttttatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="11729" stop="10096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11429" g_stop="10396" g_length="1034"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1034" r_length="1034" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U580431" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1034</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11429" e_stop="10396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAGCCTTCAACAATATTTAATACCATAAAATACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTGCAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAAATTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGCGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTAAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAAGGTTACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCCGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCGATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCATTGGAAAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTCGCCACAAACTTTGTTCCCGGAAAATGAAAATCTTAAACATTCTTAAAATTTGATTGTTTGATGGCCTTGTAAAGTAGTTGTCAGTAATTACTTGACATTAGAATGGATTATTTTTTTTCAATATTCAAAATTTCCAATGATTGTGTAATCCTGAGTTACATTTTTCAAAGCCACGAATAAAAAATATTGCCACTTTTATACC</genome_strand>
        <mrna_strand>CGCAGCCTTCAACAATATTTAATACCATAAAATACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTGCAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAAATTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGCGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTAAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAAGGTTACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCCGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCGATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCATTGGAAAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTCGCCACAAACTTTGTTCCCGGAAAATGAAAATCTTAAACATTCTTAAAATTTGATTGTTTGATGGCCTTGTAAAGTAGTTGTCAGTAATTACTTGACATTAGAATGGATTATTTTTTTTCAATATTCAAAATTTCCAATGATTGTGTAATCCTGAGTTACATTTTTCAAAGCCACGAATAAAAAATATTGCCACTTTTATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591611" ref_strand="-" ref_description="SGN-U591611 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|115819|sp|P07370|CB2B_SOLLC (e_value=2e-81) RecName:; (*ATH) AT2G34430.1 (e_value=2e-76) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=2e-82) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>aaaaaaataatccattctaatgtcaagtaattactgacaactactttacaaggccatcaaacaatcaaattttaagaatgtttaagattttcattttccgggaacaaagtttgtggcgaaagcccaagcgttgttgttaacggggtctgcaaggtggtcagcaaggttttccaatgcggtaaccttcaacggctcccatcaacacaacttgacaagcccagatggccaagatgctttgtgcatggaccaagcttgggttgcccaagtagtcaagtccaccctcgctgaagatctgggatccggccttgaaccacacagcctcaccaaactttacaccgttgcgggccaagagctcaggaaagacacatccaagagcaccaagcatagcccatctgcagtggatcacctcaagttcacggttcttggcaaaggtctcagggtcagctgaaagtccagcggtatcccagccgtagtcaccagggaattcgccagtcaagtagcttggggactcaccagagaatggtcccaagtacttaacacggtcagggccataccatgggctgctagatggggcagacttggcgacagcctttctcatagtgatccttccatttccagaattttctgaggcagatggtgagagtttgactgcctggtccagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="10181" stop="11630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10481" g_stop="10651" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10652" i_stop="10839" i_length="188">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10840" g_stop="11331" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="664" r_length="493" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U591611" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591611" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="10481" e_stop="10651"/>
          <exon e_start="10840" e_stop="11331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAATAATCCATTCTAATGTCAAGTAATTACTGACAACTACTTTACAAGGCCATCAAACAATCAAATTTTAAGAATGTTTAAGATTTTCATTTTCCGGGAACAAAGTTTGTGGCGAAAGCCCAAGCGTTGTTGTTAACGGGGTCTGCAAGGTGGTCAGCAAGGTTTTCCAATGGACCCTTTCCAGTAACAATGGCTTGAACGAAGAATCCAAACATCGAGAACATAGCAAGTCTGCCGTTCTTAATCTCCTTTACCTTGAGCTCGGCAAATGCCTCAGGGTCTTCAGCAAGGCCTAATGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACAACCTCACCAAGAGGTCCACCAGCAATGCGGTAACCTTCAACGGCTCCCATCAACACAACTTGACAAGCCCAGATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCACCAAACTTTACACCGTTGCGGGCCAAGAGCTCAGGAAAGACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAGGTCTCAGGGTCAGCTGAAAGTCCAGCGGTATCCCAGCCGTAGTCACCAGGGAATTCGCCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGTCCCAAGTACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGAATTTTCTGAGGCAGATGGTGAGAGTTTGACTGCCT-GTCCAGCAA</genome_strand>
        <mrna_strand>AAAAAAATAATCCATTCTAATGTCAAGTAATTACTGACAACTACTTTACAAGGCCATCAAACAATCAAATTTTAAGAATGTTTAAGATTTTCATTTTCCGGGAACAAAGTTTGTGGCGAAAGCCCAAGCGTTGTTGTTAACGGGGTCTGCAAGGTGGTCAGCAAGGTTTTC............................................................................................................................................................................................CAATGCGGTAACCTTCAACGGCTCCCATCAACACAACTTGACAAGCCCAGATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCACCAAACTTTACACCGTTGCGGGCCAAGAGCTCAGGAAAGACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAGGTCTCAGGGTCAGCTGAAAGTCCAGCGGTATCCCAGCCGTAGTCACCAGGGAATTCGCCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGTCCCAAGTACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGAATTTTCTGAGGCAGATGGTGAGAGTTTGACTGCCTGGTCCAGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577291" ref_strand="+" ref_description="SGN-U577291 Tomato 200607#2 [85 ESTs aligned] (*GB) gi|115819|sp|P07370|CB2B_SOLLC (e_value=1e-144) RecName:; (*ATH) AT2G34430.1 (e_value=4e-133) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P07370|CB2B_SOLLC (e_value=1e-145) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>gaccaacttcaacagtatcatcaaacacttacatttctcttgatataaacacaatggcagctgcaacaatggctctttcttccccttcttttgctggacaggcggtgaaactctcaccctctgcctcagaaatctctggaaatggaaggatcactatgagaaaggctgtcgccaagtcagccccatctagcagcccatggtatggccctgaccgtgttaagtacttgggaccattctctggtgagtcaccaagctacttgaccggtgaattccctggtgactacggctgggataccgctggactttcagcagacccagaaacctttgccaagaaccgcgaacttgaggtgatccactgcagatgggctatgcttggtgctcttggctgtgtcttccctgagctattggctcgtaacggcgtcaagttcggtgaggctgtgtggttcaaagctggatcccaaatcttcagtgagggtggacttgactacttgggcaacccaagcttggtccatgcacaaagcatcttggccatctgggcttgccaagttgtactcatgggagccgttgaaggttaccgtattgctggtggccctcttggtgaggttgtcgacccactctaccctggtggcagcttcgacccactgggtcttgctgaagacccagaggcatttgctgagctcaaggtaaaggagatcaagaacggtagacttgccatgttctctatgttcggattcttcgttcaagctattgttaccggaaagggtccattggagaaccttgctgaccaccttgcagaccccgttaacaacaacgcttgggcttttgccacaaactttgtccccggaaaatgaaactttttaaacaatcttaatattccttgtaaagtagtagtgagttacttgacaatagaatggattgtttttctttaatatttcaatgtttgtgtagtactgagtaacatcttattaagctatgaatcaaatgttgccactttcataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="14162" stop="12565"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13863" g_stop="12865" g_length="999"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="999" r_length="999" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U577291" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>999</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13863" e_stop="12865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCAACTTCAACAGTATCATCAAACACTTACATTTCTCTTGATATAAACACAATGGCAGCTGCAACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCAGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCAGACCCAGAAACCTTTGCCAAGAACCGCGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGCTGTGTCTTCCCTGAGCTATTGGCTCGTAACGGCGTCAAGTTCGGTGAGGCTGTGTGGTTCAAAGCTGGATCCCAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTACTCATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGCCCTCTTGGTGAGGTTGTCGACCCACTCTACCCTGGTGGCAGCTTCGACCCACTGGGTCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGGTAGACTTGCCATGTTCTCTATGTTCGGATTCTTCGTTCAAGCTATTGTTACCGGAAAGGGTCCATTGGAGAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTTGCCACAAACTTTGTCCCCGGAAAATGAAACTTTTTAAACAATCTTAATATTCCTTGTAAAGTAGTAGTGAGTTACTTGACAATAGAATGGATTGTTTTTCTTTAATATTTCAATGTTTGTGTAGTACTGAGTAACATCTTACTAAGCTATGAATCAAATGTTGCCACTTTCATAA</genome_strand>
        <mrna_strand>GACCAACTTCAACAGTATCATCAAACACTTACATTTCTCTTGATATAAACACAATGGCAGCTGCAACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCAGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCAGACCCAGAAACCTTTGCCAAGAACCGCGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGCTGTGTCTTCCCTGAGCTATTGGCTCGTAACGGCGTCAAGTTCGGTGAGGCTGTGTGGTTCAAAGCTGGATCCCAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTACTCATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGCCCTCTTGGTGAGGTTGTCGACCCACTCTACCCTGGTGGCAGCTTCGACCCACTGGGTCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGGTAGACTTGCCATGTTCTCTATGTTCGGATTCTTCGTTCAAGCTATTGTTACCGGAAAGGGTCCATTGGAGAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTTGCCACAAACTTTGTCCCCGGAAAATGAAACTTTTTAAACAATCTTAATATTCCTTGTAAAGTAGTAGTGAGTTACTTGACAATAGAATGGATTGTTTTTCTTTAATATTTCAATGTTTGTGTAGTACTGAGTAACATCTTATTAAGCTATGAATCAAATGTTGCCACTTTCATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580483" ref_strand="+" ref_description="SGN-U580483 Tomato 200607#2 [81 ESTs aligned] (*GB) gi|115819|sp|P07370|CB2B_SOLLC (e_value=2e-140) RecName:; (*ATH) AT1G29930.1 (e_value=2e-129)  Symbol: None | chlorophyll A-B binding protein 2, chloroplast / LHCII type I CAB-2 / CAB-140 (CAB2B), identical to SP:P04778 Chlorophyll A-B binding protein 2, chloroplast precursor (LHCII type I CAB-2) (CAB-140) (LHCP) {Arabidopsis thaliana} | chr1... ; (*SWP) sp|P07370|CB2B_SOLLC (e_value=1e-141) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>cacgaggcagccttcaacaatatttaataccataaaatactcaacacttttctcttaatataaatcatggcagctgctacaatggctctttcttccccttcatttgctggacaggcagtcaaactctcaccatctgcctcagaaatttctggaaatggaagaatcactatgagaaaggctgtcgccaagtctgccccatctagcagcccatggtatggccctgaccgtgttaagtacttgggaccattctctggtgagtcaccaagctacttgactggcgaattccctggtgactatggatgggataccgctggactttcagctgaccccgagacctttgccaagaaccgtgaacttgaggtgatccactgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctcttggcccgtaatggtgtcaaatttggtgaagctgtgtggttcaaggccggttcccagattttcagcgagggtggacttgactacttgggcaacccaagcttggtccatgcacaaagcatcttggccatctgggcttgtcaagttgtactgatgggagctgttgagggttaccgtattgctggtggacctcttggtgaggttgtcgacccactctacccaggtggcagcttcgacccattaggccttgctgaagacccggaggcatttgctgagctcaaggtaaaggagattaagaacggcagacttgctatgttctctatgtttggattctttgttcaagccattgttaccggaaagggtccattggagaatcttgctgaccaccttgcagatccagttaacaacaatgcatgggcctttgccacaaactttgttcccggcaaatgaatatcataaaatgttctctagatattattgtttgatggctttgtaaagttttagttgtgagtttacttgacaatagaatgattttttcttagtcctgaatttcatttgatgaatgaaatactgcaaaattcatattgaaggggaaaattgatgacgaagcaaaattaacaagaccagagttaaatttgagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="21254" stop="19607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20961" g_stop="19907" g_length="1055"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1055" r_length="1055" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U580483" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1055</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580483" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20961" e_stop="19907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATCACAGCCTTCAACAATATTTAATACCATAAAATACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAATTTCTGGAAATGGAAGAATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACTGGCGAATTCCCTGGTGACTATGGATGGGATACCGCTGGACTTTCAGCTGACCCCGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGGTGTCAAATTTGGTGAAGCTGTGTGGTTCAAGGCCGGTTCCCAGATTTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTACTGATGGGAGCTGTTGAGGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCAGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACCGGAAAGGGTCCATTGGAGAATCTTGCTGACCACCTTGCAGATCCAGTTAACAACAATGCATGGGCCTTTGCCACAAACTTTGTTCCCGGCAAATGAATATCATAAAATGTTCTCTAGATATTATTGTTTGATGGCTTTGTAAAGTTTTAGTTGTGAGTTTACTTGACAATAGAATGATTTTTTCTTAGTCCTGAATTTCATTTGATGAATGAAATACTGCAAAATTCATATTGAAGGGGAAAATTGATGACGAAGCAAAATTAACAAGACCAGAGTTAAATTTGAGG</genome_strand>
        <mrna_strand>CACGAGGCAGCCTTCAACAATATTTAATACCATAAAATACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAATTTCTGGAAATGGAAGAATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACTGGCGAATTCCCTGGTGACTATGGATGGGATACCGCTGGACTTTCAGCTGACCCCGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGGTGTCAAATTTGGTGAAGCTGTGTGGTTCAAGGCCGGTTCCCAGATTTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTACTGATGGGAGCTGTTGAGGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCAGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACCGGAAAGGGTCCATTGGAGAATCTTGCTGACCACCTTGCAGATCCAGTTAACAACAATGCATGGGCCTTTGCCACAAACTTTGTTCCCGGCAAATGAATATCATAAAATGTTCTCTAGATATTATTGTTTGATGGCTTTGTAAAGTTTTAGTTGTGAGTTTACTTGACAATAGAATGATTTTTTCTTAGTCCTGAATTTCATTTGATGAATGAAATACTGCAAAATTCATATTGAAGGGGAAAATTGATGACGAAGCAAAATTAACAAGACCAGAGTTAAATTTGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603757" ref_strand="+" ref_description="SGN-U603757 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>acagttatggtttaggaaatttgaggagaagttgaaactaattactacttgattcatatattttgggaacttaataatgcatctttatgttcagaaagcaatgtgattgaaactttattatattaaaccctaattagcaaagttgtttatgttagccaaacaggttatattgtattatgctcattcacaatactacatgagcaatgctgagacttggaaagagcttgttccgaagaatatgagcaaagattttaatttgttggaattcatcagcatcacaattttggctgtgttaagggaaaaagaaattacattagtaaactttaacatgtgatagtaggtcaattcacattttttaccagactacagattaatgttatcaagtgatttgcctttaattacttacttagaaatttgattgtgtaaatattgtttatgttattagtgcgtagaacttgaatttgttgtcaaaaagtgtcatattttgcataaacttgtgtcttcttctaactacatatgtatgtccgttggctctggtcattattatgtaccttgttttgaaggatctgtcaatgatgcttttaatctaaagatagtaccacatgaggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="20992" stop="22202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21292" g_stop="21902" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="611" r_length="611" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U603757" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21292" e_stop="21902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTATGGTTTAGGAAATTTGAGGAGAAGTTGAAACTAATTACTACTTGATTCATATATTTTGGGAACTTAATAATGCATCTTTATGTTCAGAAAGCAATGTGATTGAAACTTTATTATATTAAACCCTAATTAGCAAAGTTGTTTATGTTAGCCAAACAGGTTATATTGTATTATGCTCATTCACAATACTACATGAGCAATGCTGAGACTTGGAAAGAGCTTGTTCCGAAGAATATGAGCAAAGATTTTAATTTGTTGGAATTCATCAGCATCACAATTTTGGCTGTGTTAAGGGAAAAAGAAATTACATTAGTAAACTTTAACATGTGATAGTAGGTCAATTCACATTTTTTACCAGACTACAGATTAATGTTATCAAGTGATTTGCCTTTAATTACTTACTTAGAAATTTGATTGTGTAAATATTGTTTATGTTATTAGTGCGTAGAACTTGAATTTGTTGTCAAAAAGTGTCATATTTTGCATAAACTTGTGTCTTCTTCTAACTACATATGTATGTCCGTTGGCTCTGGTCATTATTATGTACCTTGTTTTGAAGGATCTGTCAATGATGCTTTTAATCTAAAGATAGTACCACATGAGGAAG</genome_strand>
        <mrna_strand>ACAGTTATGGTTTAGGAAATTTGAGGAGAAGTTGAAACTAATTACTACTTGATTCATATATTTTGGGAACTTAATAATGCATCTTTATGTTCAGAAAGCAATGTGATTGAAACTTTATTATATTAAACCCTAATTAGCAAAGTTGTTTATGTTAGCCAAACAGGTTATATTGTATTATGCTCATTCACAATACTACATGAGCAATGCTGAGACTTGGAAAGAGCTTGTTCCGAAGAATATGAGCAAAGATTTTAATTTGTTGGAATTCATCAGCATCACAATTTTGGCTGTGTTAAGGGAAAAAGAAATTACATTAGTAAACTTTAACATGTGATAGTAGGTCAATTCACATTTTTTACCAGACTACAGATTAATGTTATCAAGTGATTTGCCTTTAATTACTTACTTAGAAATTTGATTGTGTAAATATTGTTTATGTTATTAGTGCGTAGAACTTGAATTTGTTGTCAAAAAGTGTCATATTTTGCATAAACTTGTGTCTTCTTCTAACTACATATGTATGTCCGTTGGCTCTGGTCATTATTATGTACCTTGTTTTGAAGGATCTGTCAATGATGCTTTTAATCTAAAGATAGTACCACATGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591971" ref_strand="+" ref_description="SGN-U591971 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|224928|prf||1204205C (e_value=4e-46) protein 1C,chlorophyll binding; (*ATH) AT2G34430.1 (e_value=2e-44) | Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23; (*SWP) sp|P14275|CB2C_SOLLC (e_value=2e-47) Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C; ">
      <seq>gaaaaaaaaatccattctatgaagggagcaactactttacagggccatcaaacaatcaaaattcaaaaaatatattatgatattcattttccggggacaaagtttgtggcgaaagcccaagcgttgttgttaacggggtctgcaaggtggtcagcaaggttctccaatggaccctttccggtaacaatggcctgaacaaagaatccgaacatagagaacatagcaagtctgccgttcttaatctcctttaccttgagctcagcaaatgccttggggtcttcagcaaggcctaatgggtcgaagctgccaccgttgtagagtggttcgacaaccttaccaagaggtccatcagtaattcggtaacctttaacggcttccattcaagacaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="22044" stop="23033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22344" g_stop="22733" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U591971" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591971" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22344" e_stop="22733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAAAAATCCATTCTATTAAGTCA-CAACTACTTTACAGGGCCATCAAACAATCAAAATTCAAAAAATATATTATGATATTCATTTTCCGGGGACAAAGTTTGTGGCGAAAGCCCAAGCGTTGTTGTTAACGGGGTCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCCGGTAACAATGGCCTGAACAAAGAATCCGAACATAGAGAACATAGCAAGTCTGCCGTTCTTAATCTCCTTTACCTTGAGCTCAGCAAATGCCTCGGGGTCTTCAGCAAGGCCTAATGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACAACCTCACCAAGAGGTCCACCAGCAATACGGTAACCTTCAACGGCTCCCA-TCAAGACAACTT</genome_strand>
        <mrna_strand>GAAAAAAAAATCCATTCTATGAAGGGAGCAACTACTTTACAGGGCCATCAAACAATCAAAATTCAAAAAATATATTATGATATTCATTTTCCGGGGACAAAGTTTGTGGCGAAAGCCCAAGCGTTGTTGTTAACGGGGTCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCCGGTAACAATGGCCTGAACAAAGAATCCGAACATAGAGAACATAGCAAGTCTGCCGTTCTTAATCTCCTTTACCTTGAGCTCAGCAAATGCCTTGGGGTCTTCAGCAAGGCCTAATGGGTCGAAGCTGCCACCGTTGTAGAGTGGTTCGACAACCTTACCAAGAGGTCCATCAGTAATTCGGTAACCTTTAACGGCTTCCATTCAAGACAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592240" ref_strand="+" ref_description="SGN-U592240 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|115819|sp|P07370|CB2B_SOLLC (e_value=3e-111) RecName:; (*ATH) AT1G29930.1 (e_value=3e-100)  Symbol: None | chlorophyll A-B binding protein 2, chloroplast / LHCII type I CAB-2 / CAB-140 (CAB2B), identical to SP:P04778 Chlorophyll A-B binding protein 2, chloroplast precursor (LHCII type I CAB-2) (CAB-140) (LHCP) {Arabidopsis thaliana} | chr1... ; (*SWP) sp|P07370|CB2B_SOLLC (e_value=2e-112) Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B; ">
      <seq>gcaactccctcattttcctctctttaaaaaccatggcagctgctacaatggctctttcttctccttcttttgccggacaggcagtgaaactctcaccctctgcctcagaaatctctggaaatggaaggatcaccatgagaaaggctgttgccaagtctgccccatctagcagtccatggtatggccctgaccgtgttaagtacttgggcccattctctggtgagtccccaagctacttgactggtgaattccctggtgactacggctgggataccgctggactctcagcagaccctgaaacctttgccaagaaccgtgaactcgaggtgatccactgcagatgggctatgcttggtgctcttggatgtgtcttccctgagctattggcccgtaacggtgtcaagttcggtgaggctgtgtggttcaaggccggatcccagatcttcagcgagggaggacttgactacttgggcaacccaagcttggtccatgcacagagcatcttggccatctgggcttgccaagttgtcttgatgggagccgttgaaggttaccgtattgctggtggacctcttggtgaggttgtcgacccactctaccccggtggcagcttcgacccattaggccttgctgaagaccccgttaacaacaacgcttgggctttcgccacaaactttgtccccggaaaatgaatatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="23555" stop="22119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23255" g_stop="22620" g_length="636"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="636" r_length="636" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22619" i_stop="22482" i_length="138">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22481" g_stop="22419" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="699" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U592240" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U592240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23255" e_stop="22620"/>
          <exon e_start="22481" e_stop="22419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTCCCTCATTTTCCTCTCTTTAAAAACCATGGCAGCTGCTACAATGGCTCTTTCTTCTCCTTCTTTTGCCGGACAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACCATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGTCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTCTCAGCAGACCCTGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAACGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGAGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAGAGCATCTTAGCCATCTGGGCTTGCCAAGTTGTCTTGATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCCGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCTATGTTCGGATTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTCGCCACAAACTTTGTCCCCGGAAAATGAATATCAT</genome_strand>
        <mrna_strand>GCAACTCCCTCATTTTCCTCTCTTTAAAAACCATGGCAGCTGCTACAATGGCTCTTTCTTCTCCTTCTTTTGCCGGACAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACCATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGTCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTCTCAGCAGACCCTGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAACGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGAGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAGAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTCTTGATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAG..........................................................................................................................................ACCCCGTTAACAACAACGCTTGGGCTTTCGCCACAAACTTTGTCCCCGGAAAATGAATATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598087" ref_strand="+" ref_description="SGN-U598087 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147857735|emb|CAN78668.1| (e_value=4e-12) hypothetical; ">
      <seq>agagtaaattctattcacaataagatttttaagacatatacagtacataagcaaaagttatttggttctcgtaaactcgtacctgaaactctggatctaaccctggatatcaaagctctttattcagaaaataccttaaaataacataccaaaaaatcccaaatcggcctaaaatttcaaacagaagtgattaaattgtcctttgcagcagttggcgctctttttcctttccatttcttcaaccttcaacaactaaaaccctaaaacccaattcaaattctgattcaccaaaaaaataattcaaagaccttctccacattccaatttcttctcatctctcaaacaattggagaaaagattgaaacttgatgattcatctaaacgtgaagctgtcgagacaccaacccagtctttgatcagccgattatacctcaactgtgatgagacccctgctgactccatcaccagatccacaaacctcaaaaaaagtgaaggcccacttcaatttctctcaaattcctcacttgcccaagaangtgttggtatagttgaagctggtggtaatgnggttgatgagattgaactgatgatgcagctattgggttttcgganagtgaaagggaagganccaaagggtggaagtggattttggctgtgatgatgcattttatggaaacattgttggggttcnnnnccaaaagtgaaaanantggnnangtttgng</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="24119" stop="25409"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24419" g_stop="25147" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U598087" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24419" e_stop="25147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTAAATTCTATTCACAATAAGATTTTTAAGACATATACAGTACATAAGCAAAAGTTATTTGGTTCTCGTAAACTCGTACCTGAAACTCTGGATCTAACCCTGGATATCAAAGCTCTTTATTCAGAAAATACCTTAAAATAACATACCAAAAAATCCCAAATCGGCCTAAAATTTCAAACAGAAGTGATTAAATTGTCCTTTGCAGCAGTTGGCGCTCTTTTTCCTTTCCATTTCTTCAACCTTCAACAACTAAAACCCTAAAACCCAATTCAAATTCTGATTCACCAAAAAAATAATTCAAAGACCTTCTCCACATTCCAATTTCTTCTCATCTCTCAAACAATTGGAGAAAAGATTGAAACTTGATGATTCATCTAAACGTGAAGCTGTCGAGACACCAACCCAGTCTTTGATCAGCCGATTATACCTCAACTGTGATGAGACCCCTGCTGACTCCATCACCAGATCCACAAACCTCAAAAAAAGTGAAGGCCCACTTCAATTTCTCTCAAATTCCTCACTTGCCCAAGAAAGTGTTGGTATAGTTGAAGCTGGTGGTAATGGGGTTGATGAGATTGAACTGATGATGCAGCTATTGGGTTTTCGGAGAGTGAAAGGGAAGGACCCAAAAGGGTGGAAGTGGATTTTGGCTGTGATGATGCATTTTATGGAAACATTGTTGGGGTTCAGGGTCCAAAAAGTGAAAAAGAAATGGAGAGGTTTGTG</genome_strand>
        <mrna_strand>AGAGTAAATTCTATTCACAATAAGATTTTTAAGACATATACAGTACATAAGCAAAAGTTATTTGGTTCTCGTAAACTCGTACCTGAAACTCTGGATCTAACCCTGGATATCAAAGCTCTTTATTCAGAAAATACCTTAAAATAACATACCAAAAAATCCCAAATCGGCCTAAAATTTCAAACAGAAGTGATTAAATTGTCCTTTGCAGCAGTTGGCGCTCTTTTTCCTTTCCATTTCTTCAACCTTCAACAACTAAAACCCTAAAACCCAATTCAAATTCTGATTCACCAAAAAAATAATTCAAAGACCTTCTCCACATTCCAATTTCTTCTCATCTCTCAAACAATTGGAGAAAAGATTGAAACTTGATGATTCATCTAAACGTGAAGCTGTCGAGACACCAACCCAGTCTTTGATCAGCCGATTATACCTCAACTGTGATGAGACCCCTGCTGACTCCATCACCAGATCCACAAACCTCAAAAAAAGTGAAGGCCCACTTCAATTTCTCTCAAATTCCTCACTTGCCCAAGAANGTGTTGGTATAGTTGAAGCTGGTGGTAATGNGGTTGATGAGATTGAACTGATGATGCAGCTATTGGGTTTTCGGANAGTGAAAGGGAAGGANCC-AAAGGGTGGAAGTGGATTTTGGCTGTGATGATGCATTTTATGGAAACATTGTTGGGGTTC-NNNNCC-AAAAGTG-AAAA-NANTGGNNANGTTTGNG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599651" ref_strand="+" ref_description="SGN-U599651 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359016|emb|CAO66918.1| (e_value=4e-79) unnamed; (*ATH) AT5G46330.1 (e_value=2e-68) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18808963-18812773 FORWARD | Aliases: MPL12.13, MPL12_13; (*SWP) sp|Q9FL28|FLS2_ARATH (e_value=1e-67) LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2; ">
      <seq>gccctagcataaccgagcaccttaaccaggttcctgtgtttgagttggctcagagtcttgacttccctatcaaagcatttacgaatttctgctgagaactgaagattcagtttcttaactgctacaattttcccaccttccagtgttcctttgtacacattacttgaactgctggctccaataatgttttgtggactgaaattatcagtagcatgttccaaatccttttgataaaatctctggaggctaagtgctgaggtataatttggaattatatcctccgagtctttcactttttgcttcttcatgtacagatgacacacaaatattcccaccacatgaagaatgagaaccaaaacaggcccaagtatgatccaggttttcttggacaacccatgagaacttgtttggtttcttttgatgctgcatggactgagaaactccgttccacatagcgatggatttccctgtaaatctgctgaccttaagttgtcgaatacacccccctttggaatgtgaccttcaagctggttaaaagaaaggttgagatatattaatgcaggcatattggcaaatctctcaggaatgattcccttgaacttgttttgtgaaagatcaagtgagcgaagatgtagcaatcctaccatttcaggaagtttgccttctaatctgttccttgagaggttcaagaatactagctcacttaacttggtcagaatttcgcctggagcaggaccagacagcatgtttcctgacaggtccagtgagaataagtttttgcagcgtcctaaggatctgggaatgtttcctgatagattgttgtttgacatatcaatccccttgaaccatttctaacatgccaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="26438" stop="27900"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26737" g_stop="27600" g_length="864"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="865" r_length="865" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U599651" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>864</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26737" e_stop="27600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAAGCATAACCGAGCACCTTAACCAGGTTCCTGTGTTTGAGTTGGCTCAGAGTCTTGACTTCCCTATCAAAGCATTTACGAATTTCTGCTGAGAACTGAAGATTCAGTTTCTTAACTGCTACAATTTTCCCACCTTCCAGTGTTCCTTTGTACACATTACTTGAACTGCTGGCTCCAATAATGTTTTGTGGACTGAAATTATCAGTAGCATGTTCCAAATCCTTTTGATAAAATCTCTGGAGGCTAAGTGCTGAGGTATAATTTGGAATTATATCCTCCGAGTCTTTCACTTTTTGCTTCTTCATGTACAGATGACACACAAATATTCCCACCACATGAAGAATGAGAACCAAAACAGGCCCAAGTATGATCCAGGTTTTCTTGGACAACCCATGAGAACTTGTTTGGTTTCTTTTGATGCTGCATGGACTGAGAAACTCCGTTCCACATAGCGATGGATTTCCCTGTAAATCTGCTGACCTTAAGTTGTCGAATACACCCCCCTTTGGAATGTGACCTTCAAGCTGGTTAAAAGAAAGGTTGAGATATATTAATGCAGGCATATTGGCAAATCTCTCAGGAATGATTCCCTTGAACTTGTTTTGTGAAAGATCAAGTGAGCGAAGATGTAGCAATCCTACCATTTCAGGAAGTTTGCCTTCTAATCTGTTCCTTGAGAGGTTCAAGAATACTAGCTCACTTAACTTGGTCAGAATTTCGCCTGGAGCAGGACCAGACAGCATGTTTCCTGACAGGTCCAGTGAGAATAAGTTTTTGCAGCGTCCTAGGGATCTGGGAATGTTGCCTGATAGATTGTTGTTTGACATATCAAT-CCCTTGAACCATTTCTAACATGCCAATC</genome_strand>
        <mrna_strand>GCCCTAGCATAACCGAGCACCTTAACCAGGTTCCTGTGTTTGAGTTGGCTCAGAGTCTTGACTTCCCTATCAAAGCATTTACGAATTTCTGCTGAGAACTGAAGATTCAGTTTCTTAACTGCTACAATTTTCCCACCTTCCAGTGTTCCTTTGTACACATTACTTGAACTGCTGGCTCCAATAATGTTTTGTGGACTGAAATTATCAGTAGCATGTTCCAAATCCTTTTGATAAAATCTCTGGAGGCTAAGTGCTGAGGTATAATTTGGAATTATATCCTCCGAGTCTTTCACTTTTTGCTTCTTCATGTACAGATGACACACAAATATTCCCACCACATGAAGAATGAGAACCAAAACAGGCCCAAGTATGATCCAGGTTTTCTTGGACAACCCATGAGAACTTGTTTGGTTTCTTTTGATGCTGCATGGACTGAGAAACTCCGTTCCACATAGCGATGGATTTCCCTGTAAATCTGCTGACCTTAAGTTGTCGAATACACCCCCCTTTGGAATGTGACCTTCAAGCTGGTTAAAAGAAAGGTTGAGATATATTAATGCAGGCATATTGGCAAATCTCTCAGGAATGATTCCCTTGAACTTGTTTTGTGAAAGATCAAGTGAGCGAAGATGTAGCAATCCTACCATTTCAGGAAGTTTGCCTTCTAATCTGTTCCTTGAGAGGTTCAAGAATACTAGCTCACTTAACTTGGTCAGAATTTCGCCTGGAGCAGGACCAGACAGCATGTTTCCTGACAGGTCCAGTGAGAATAAGTTTTTGCAGCGTCCTAAGGATCTGGGAATGTTTCCTGATAGATTGTTGTTTGACATATCAATCCCCTTGAACCATTTCTAACATGCCAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597978" ref_strand="+" ref_description="SGN-U597978 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147857736|emb|CAN78669.1| (e_value=6e-16) hypothetical; (*ATH) AT5G46330.1 (e_value=4e-12) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18808963-18812773 FORWARD | Aliases: MPL12.13, MPL12_13; (*SWP) sp|Q9FL28|FLS2_ARATH (e_value=3e-11) LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2; ">
      <seq>atggccctttataaggaaaaattatttaaatagtaaatgcattttaacttttaaaaaacttccattagccaccagtgggaaacttagtggtggttcacattaaaagtgatgatattccagcttcttctacatcaaatttaatcttttaccaaatgagaaggcatgaagtccatcttacttagctttgaaagagaagacagaacttgttccatgtcaggtctatcttcaggatcaggagaggtgcaggacaaagccaagttaagaagtccctctactacatcctgtttcttggaaacatatgaagctagattaggatccacaatctgaactagcttgtttattttgtttttatgggcattctgaacaatttgatgcaatgtaattggtaattcatctgctcctgtaagacttgttggccttctttttgaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="33114" stop="34135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33404" g_stop="33835" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U597978" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597978" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33404" e_stop="33835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCTTGAAATACGGAAAAATTATTTAAATAGTAAATGCATTTTAAGTTATGAACTAGTTCCATTAGCCACCA-TGGGAAACTTGGTGGTGGTTCACATTAAGAGTGATGATATTCCAGCTTCTTCTACATCAAATTTAATCTTTTACCAAATGAGAAGGCATACAGTCCATCTTACTTAGCTTTGAAAGAGAAGACAGAACTTGTTCCATGTCAGGTCTATCTTCAGGATCAGGAGAGGTGCAGGACAAAGCCAAGTTAAGAAGTCCCTCTACTACATCCTGTTTCTTGGAGACATATGAAGCTAGATTAGGATCCACAATCTGAACTAGCTTGTTTATGCCATTCGCAAGGGCATTCTGAACAATTTGATGCAAAGTAATTGGTAATTCATCTGCTCCTGTAAGACTTGTTGGCCTTCTTTTTGTAATGA</genome_strand>
        <mrna_strand>ATGGCCCTTTATAAGGAAAAATTATTTAAATAGTAAATGCATTTTAACTTTTAAAAAACTTCCATTAGCCACCAGTGGGAAACTTAGTGGTGGTTCACATTAAAAGTGATGATATTCCAGCTTCTTCTACATCAAATTTAATCTTTTACCAAATGAGAAGGCATGAAGTCCATCTTACTTAGCTTTGAAAGAGAAGACAGAACTTGTTCCATGTCAGGTCTATCTTCAGGATCAGGAGAGGTGCAGGACAAAGCCAAGTTAAGAAGTCCCTCTACTACATCCTGTTTCTTGGAAACATATGAAGCTAGATTAGGATCCACAATCTGAACTAGCTTGTTTATTTTGTTTTTATGGGCATTCTGAACAATTTGATGCAATGTAATTGGTAATTCATCTGCTCCTGTAAGACTTGTTGGCCTTCTTTTTGAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586739" ref_strand="+" ref_description="SGN-U586739 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359016|emb|CAO66918.1| (e_value=2e-70) unnamed; (*ATH) AT5G46330.1 (e_value=4e-60) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18808963-18812773 FORWARD | Aliases: MPL12.13, MPL12_13; (*SWP) sp|Q9FL28|FLS2_ARATH (e_value=4e-59) LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2; ">
      <seq>atttactgggaaatccatctctatgtggaaaaaagtttctcagtccatgccacataaaaagaaaccgaacgagttctcatggtttttccaagaaaacctggatcatacttgcagcacttggatctgttttcagtctcattcttcttgtcctgggaatatttttatttcatcggtacatgaagaagaagaaaaaagtgaatgacacggagtttacaaatccaaagtgtaccgcagcactgagcctccagagattttatcaaaaggatttggaacatgctaccaataatttccgtccggaaaacattattggagccagcagtttaagtactgtgtacaaaggaacactggaagatgggaagattgtagcagttaagaagctgaatcaccagttctcagcagaatctggtaaatgttttgatagggaagtcaagactctgagccaactcagacacaggaacctagttaaggtgctaggttacgcttgggaaagcaagaagctaagggctttagttttagaatacatggagaatgggaacttggacaacatgatttattgtcaagtagaggatgactggacgttgtccaacaggattgatattttagtttcagttgcaagtggactatcatacctgcattcaggctatgattttccaatagtgcactgtgacatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="35470" stop="34202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35170" g_stop="34502" g_length="669"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="672" r_length="672" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U586739" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35170" e_stop="34502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTACTGGGAAATCCATCTCTATGTGGAAAAAAGTTTCTCAGTCCATGCCACATAAAAAGAAACCGAACAAGTTCTCATGGTTTTTCCAAGAAAACCTGGATCATACTTGCAGCACTTGGATCTGTTTTCAGTCTCATTCTTCTTGTCCTGGGAATATTTTTATTTCATCGGTACAT---GAAGAAGAAAAAAGTGAATGACACGGAGTTTACAAATCCAAAGTGTACCGCAGCACTGAGCCTCCAGAGATTTTATCAAAAGGATTTGGAACATGCTACCAATAATTTCCGTCCGGAAAACATTATTGGAGCCAGCAGTTTAAGTACTGTGTACAAAGGAACACTGGAAGATGGGAAGATTGTAGCAGTTAAGAAGCTGAATCACCAGTTCTCAGCAGAATCTGGTAAATGTTTTGATAGGGAAGTCAAGACTCTGAGCCAACTCAGACACAGGAACCTAGTTAAGGTGCTAGGTTACGCTTGGGAAAGCAAGAAGCTAAGGGCTTTAGTTTTAGAATACATGGAGAATGGGAACTTGGACAACATGATTTATGGTCAAGTAGAGGATGACTGGACGTTGTCCAACAGGATTGATATTTTAGTTTCAGTTGCAAGTGGACTATCATACCTGCATTCAGGCTATGATTTTCCAATAGTGCACTGTGACATGA</genome_strand>
        <mrna_strand>ATTTACTGGGAAATCCATCTCTATGTGGAAAAAAGTTTCTCAGTCCATGCCACATAAAAAGAAACCGAACGAGTTCTCATGGTTTTTCCAAGAAAACCTGGATCATACTTGCAGCACTTGGATCTGTTTTCAGTCTCATTCTTCTTGTCCTGGGAATATTTTTATTTCATCGGTACATGAAGAAGAAGAAAAAAGTGAATGACACGGAGTTTACAAATCCAAAGTGTACCGCAGCACTGAGCCTCCAGAGATTTTATCAAAAGGATTTGGAACATGCTACCAATAATTTCCGTCCGGAAAACATTATTGGAGCCAGCAGTTTAAGTACTGTGTACAAAGGAACACTGGAAGATGGGAAGATTGTAGCAGTTAAGAAGCTGAATCACCAGTTCTCAGCAGAATCTGGTAAATGTTTTGATAGGGAAGTCAAGACTCTGAGCCAACTCAGACACAGGAACCTAGTTAAGGTGCTAGGTTACGCTTGGGAAAGCAAGAAGCTAAGGGCTTTAGTTTTAGAATACATGGAGAATGGGAACTTGGACAACATGATTTATTGTCAAGTAGAGGATGACTGGACGTTGTCCAACAGGATTGATATTTTAGTTTCAGTTGCAAGTGGACTATCATACCTGCATTCAGGCTATGATTTTCCAATAGTGCACTGTGACATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586740" ref_strand="+" ref_description="SGN-U586740 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359016|emb|CAO66918.1| (e_value=2e-11) unnamed; ">
      <seq>tccatctctatgtggaaaaaagtttctcagtccatgccacataaaaagaaaccgaacaagttctcatggtttttccaagaaaacctggatcatacttgcagcacttggatctgttttcagtctcattcttcttgtcctgggaatatttttatttcatcggtacatgaagaagaagaaaaaagtgaatgacacggagtttacaaatccaaagtgtaacacaccactgagcctccacagataataccaaaaggatctggaaaatgatactaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="35457" stop="34589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35157" g_stop="34889" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U586740" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>269</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35157" e_stop="34889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATCTCTATGTGGAAAAAAGTTTCTCAGTCCATGCCACATAAAAAGAAACCGAACAAGTTCTCATGGTTTTTCCAAGAAAACCTGGATCATACTTGCAGCACTTGGATCTGTTTTCAGTCTCATTCTTCTTGTCCTGGGAATATTTTTATTTCATCGGTACAT---GAAGAAGAAAAAAGTGAATGACACGGAGTTTACAAATCCAAAGTGTACCGCAGCACTGAGCCTCCAGAGATTTTATCAAAAGGATTTGGAACATGCTACCAATA</genome_strand>
        <mrna_strand>TCCATCTCTATGTGGAAAAAAGTTTCTCAGTCCATGCCACATAAAAAGAAACCGAACAAGTTCTCATGGTTTTTCCAAGAAAACCTGGATCATACTTGCAGCACTTGGATCTGTTTTCAGTCTCATTCTTCTTGTCCTGGGAATATTTTTATTTCATCGGTACATGAAGAAGAAGAAAAAAGTGAATGACACGGAGTTTACAAATCCAAAGTGTAACACACCACTGAGCCTCCACAGATAATACCAAAAGGATCTGGAAAATGATACTAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564585" ref_strand="+" ref_description="SGN-U564585 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157359016|emb|CAO66918.1| (e_value=6e-80) unnamed; (*ATH) AT5G46330.1 (e_value=1e-58) | Symbol: None | leucine-rich repeat transmembrane protein kinase, putative | chr5:18808963-18812773 FORWARD | Aliases: MPL12.13, MPL12_13; (*SWP) sp|Q9FL28|FLS2_ARATH (e_value=9e-58) LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2; ">
      <seq>aagttttttcagtgagtgaagttttctttcttttgaaatgatgatgttaaagacagttgtatatgcattagccatattttctattacctttctcatacctttgtcatctgggcaaaatccaagatttgaagttgaagttgctgctttgaaagctttcaagagctcaatctctgacgaccctttcagtgcacttgtggattggactgatgtaaatcaccattgcaactggtctggaatcatatgtgatccttcttcaaatcatgtcatcaacatttcacttattgagacacagctcaaaggagaaatttctccgtttctaggaaacctctccaaactccaggttcttgatctaactttgaattcatttactggaaatattccaccccagctgggtcattgcacggacctggttgagctcgttttttaccaaaactctctttttggtgaaattcctgccgagctgggaaacctaaaaaaactgcagttaatagattttggaaataactttctaaatgggagtatacctgatagtatatgcaactgcactgaattgttgttagtaggcttcaacaacaacaatttcacaggcaaattaccatctgaaattggtaatttggctaatcttcagttgtttgtagcttatacaaacaatttggttggttttatgcctacctccattggaatgctgacagctttgcatacccttgatctgagcgaaaaccagttatctggacctataccaccagaaattggnaacttgtcaagttnagnaatncttcagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="37836" stop="36454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37536" g_stop="36754" g_length="783"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="783" r_length="783" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U564585" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564585" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37536" e_stop="36754"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTTTTCAGTGAGTGAAGTTTTCTTTCTTTTGAAATGATGATGTTAAAGACAGTTGTATATGCATTAGCCATATTTTCTATTACCTTTCTCATACCTTTGTCATCTGGGCAAAATCCAAGATTTGAAGTTGAAGTTGCTGCTTTGAAAGCTTTCAAGAGCTCAATCTCTGACGACCCTTTCAGTGCACTTGTGGATTGGACTGATGTAAATCACCATTGCAACTGGTCTGGAATCATATGTGATCCTTCTTCAAATCATGTCATCAACATTTCACTTATTGAGACACAGCTCAAAGGAGAAATTTCTCCGTTTCTAGGAAACCTCTCCAAACTCCAGGTTCTTGATCTAACTTTGAATTCATTTACTGGAAATATTCCACCCCAGCTGGGTCATTGCACGGACCTGGTTGAGCTCGTTTTTTACCAAAACTCTCTTTTTGGTGAAATTCCTGCCGAGCTGGGAAACCTAAAAAAACTGCAGTTAATAGATTTTGGAAATAACTTTCTAAATGGGAGTATACCTGATAGTATATGCAACTGCACTGAATTGTTGTTAGTAGGCTTCAACAACAACAATTTCACAGGCAAATTACCATCTGAAATTGGTAATTTGGCTAATCTTCAGTTGTTTGTAGCTTATACAAACAATTTGGTTGGTTTTATGCCTACCTCCATTGGAATGCTGACAGCTTTGCATACCCTTGATCTGAGCGAAAACCAGTTATCTGGACCTATACCACCAGAAATTGGCAACTTGTCAAGTTTAGGAATTCTTCAGTT</genome_strand>
        <mrna_strand>AAGTTTTTTCAGTGAGTGAAGTTTTCTTTCTTTTGAAATGATGATGTTAAAGACAGTTGTATATGCATTAGCCATATTTTCTATTACCTTTCTCATACCTTTGTCATCTGGGCAAAATCCAAGATTTGAAGTTGAAGTTGCTGCTTTGAAAGCTTTCAAGAGCTCAATCTCTGACGACCCTTTCAGTGCACTTGTGGATTGGACTGATGTAAATCACCATTGCAACTGGTCTGGAATCATATGTGATCCTTCTTCAAATCATGTCATCAACATTTCACTTATTGAGACACAGCTCAAAGGAGAAATTTCTCCGTTTCTAGGAAACCTCTCCAAACTCCAGGTTCTTGATCTAACTTTGAATTCATTTACTGGAAATATTCCACCCCAGCTGGGTCATTGCACGGACCTGGTTGAGCTCGTTTTTTACCAAAACTCTCTTTTTGGTGAAATTCCTGCCGAGCTGGGAAACCTAAAAAAACTGCAGTTAATAGATTTTGGAAATAACTTTCTAAATGGGAGTATACCTGATAGTATATGCAACTGCACTGAATTGTTGTTAGTAGGCTTCAACAACAACAATTTCACAGGCAAATTACCATCTGAAATTGGTAATTTGGCTAATCTTCAGTTGTTTGTAGCTTATACAAACAATTTGGTTGGTTTTATGCCTACCTCCATTGGAATGCTGACAGCTTTGCATACCCTTGATCTGAGCGAAAACCAGTTATCTGGACCTATACCACCAGAAATTGGNAACTTGTCAAGTTNAGNAATNCTTCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567930" ref_strand="+" ref_description="SGN-U567930 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|147767796|emb|CAN76054.1| (e_value=1e-53) hypothetical; (*ATH) AT1G29950.1 (e_value=4e-28) | Symbol: None | expressed protein | chr1:10493445-10494582 FORWARD | Aliases: T1P2.2; ">
      <seq>ttttgctattctcgcagtggcttggattgaagactataatatactgcactggaccaatcaacatgccgtgggcattttcttctctgagttattgtgtgaagtgtgtgcgctttgtggtattctttcgtgtgattctgtaacccattttacttgattgcggaatcactttattttctgtcttgtgatatttcttgatactagtctatttggaggttgagaatgtacattgcgattaccttgaagagatacagagcagttaaagaagctggtgagattaaaatgcatgtggggagtgttgcttattaccaattgatgctagtttgtcaggtaaatattcttttagcttttggtcctgtctttttgattaaattgcactgaatccaaccaaactcgtacagtctaaaggaaatagagacaaatcaactagaacttaattgaatattgtatgggaggattcttttttgtgtttcagtcttctgtttatgttctgactggtattttgtgccaggtgcatgatcttctactgacagtcttattaagacttggcttaaaccactatgaaaatgttgaacactattcctctttctatcaatattgactttatcactgaggttgagtacagaaaattgtttatcctcagtgtagtgtactgctatatagtttccataggcatcttgatatccatacagataaccgcgtctgtattgaaatataacttttgtatgccttctgtataatgctcatcttaccaagtgtatggtggttccgttcaacctcaagacaatgagaatagttgggattattttctaggcatattgtttccttgttttaatatttttcttatcttgcatttgttctgaatgtatgacaacccaatgatatggttctttggttcttgctttttacaggctgagtacttccgtcagttgcttaaacctgtaacgtagtctgctaaagtgtaagctttggggaggttgggattgcttacttcttgttgctcttattcagcaaagccttgttgaagttgggatttgttgcttctctttcagtgtatacgaaatcagaatgacctcattaagcactgaatgtggttactgttgattggaattgtcagtgcttttttactacaactaatacaccttgaacattactctcttttgcctgtgcctttcgtaactcttagctactttcatttttaaaacatcccaagtggaaaacacttttctagtccagtttattggatctttgacttagttactcatgcagaataactatcaattttcccctcaaattcaaaagccttttgtctctctggaagaccaagcagctggtggtaatatatttgatattcctgttccatccgtctttgatacaatggcacttcctactagtttcaaatcttctgtgccctttcatggttttgaatttcagtcctctgaggcatgtccaaagaatttcatcatctttgatcagactgattaccggagccagatcatgtaccaccctgccatgacctccaaattcccatatcctgatctgaattataattcaacttgcttccacgactgcatggagagaaaaattgcaaacaatgagaatacagaagtttcttcatatctgaaggaagattcagatgatataaatgcattgctcagcttggaagaggaagaacgtgaggaatgtgatgaagaagaggtgagcactgcacgcactgatgcaaactatggatgcagttcccctgaatcatactcaaactatcattgtcaatccaaaaagagcaggacctcttctttcagggaatcctctggtagcagtactagcaattgcagtgagagaaaacgcaggaaacttaagaagatggtcaaggcattaaagggaatcgtccctggtgccagcaggatgaatactgtcaccgttcttgatgaagctgtcagatacctcaagtcacttaaggtggaagtgcagaagcttggagtcgataatctgaagacatatgcctgatatcctttgtggtataggtaatttcgcttcctttatcaccgtcacatgattatgaaccctagtcatatcttttgcttatgtgaagaagaactacttataccgtcgtattgctgagttgctgctctggagggggtaacgtaacgtagaatatggtcctttgtccagcgataggacaataagtctgctgtagtagctagctgctatatctaatttctcattctagcatatagtatgtttccactagttgcaaactctattaaggcatttgaataatttctccaatatgtgacactctttcacctattggagctgctatttgttattgttgttgtatgactttgatgatttgttttaatggataatgggttgatgattacnctttatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="47507" stop="44112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47207" g_stop="47055" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47054" i_stop="46645" i_length="410">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46644" g_stop="44412" g_length="2233"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="2387" r_length="2234" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U567930" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>2386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U567930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47207" e_stop="47055"/>
          <exon e_start="46644" e_stop="44412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTGGTGAGATAGCCTCTTGTATTTCCTAAATCTCTATCTGTCTCTTCAGCCTTAGATTTTATTTGTTTCTATGTAACTATTGCACCTTCGAGATAGAGATAAGGTCTGGGAATGTTGTTGTTGTTGTGGTGTGTAAATATTGCGGATTAACTATTCCTGTTGAGGATTTACTAAAACAGAACAGTAATGCCCAAGAGATTAAAAAAAAACTTATTGCCGAAAAGTATTTAGAAGAAGATAATTTTAGTTGGGTTGACAATAGAGAAATGGAAATTAAAGTTGTATTACTCGAGTGTTATTCAGGTGATGGATCCATTAGTTTTACAGTGGTTCGCTACTCACTTGAGAAATAAGTTTTGCTTGTATTGATGTTCTTTAATGTTTTACTCATTTGTGCTTGTTTGGTATGACAGATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGC-TTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCATGGTTTTGAATTTCGGTCCTCTGAGGCATGTCCAAAGAATTTCATCATCTTTGATCAGACTGATTACCGGAGCCAGATCATGTACCACCCTGCCATGACCTCCAAATTCCCATATCCTGATCTGAATTATAATTCAACTTGCTTCCACGACTGCATGGAGAGAAAAATTGCAAACAATGAGAATACAGAAGTTTCTTCATATCTGAAGGAAGATTCAGATGATATAAATGCATTGCTCAGCTTGGAAGAGGAAGAATGTGAGGAATATGATGAAGAAGAGGTGAGCACTGCACGCACTGATGCAAACTATGGATGCAGTTCCCCTGAATCATACTCAAACTATCATTGTCAATCCAAAAAGAGCAGGACCTCTTCTTTCAGGGAATCCTCTGGTAGCAGTACTAGCAATTGCAGTGAGAGAAAACGCAGGAAACTTAAGAAGATGGTCAAGGCATTAAAGGGAATCGTCCCTGGTGCCAGCAGGATGAATACTGTCACCGTTCTTGATGAAGCTGTCAGATACCTCAAGTCACTTAAGGTGGAAGTGCAGAAGCTTGGAGTCGATAATCTGAAGACATATGCCTGATATCCTTTGTGGTATAGGTAATTTCGCTTCCTTTATCACCGTCACATGATTATGAACCCTAGTCATATCTTTTGCTTATGTGAAGAAGAACTACTTATACCGTCGTATTGCTGAGTTGCTGCTCTGGAGGGGGTAACGTAACGTAGAATATGGTCCTTTGTCCAGCGATAGGACAATAAGTCTGCTGTAGTAGCTAGCTGCTATATCTAATTTCTCATTCTAGCATATAGTATGTTTCCACTAGTTGCAAACTCTATTAAGGCATTTGAATAATTTCTCCAATATGTGACACTCTTTCACCTATTGGAGCTGCTATTTGTTATTGTTGTTGTATGACTTTGATGATTTGTTTTAATGGATAATGGGTTGATGATTACACTTTATGC</genome_strand>
        <mrna_strand>TTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTCATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCATGGTTTTGAATTTCAGTCCTCTGAGGCATGTCCAAAGAATTTCATCATCTTTGATCAGACTGATTACCGGAGCCAGATCATGTACCACCCTGCCATGACCTCCAAATTCCCATATCCTGATCTGAATTATAATTCAACTTGCTTCCACGACTGCATGGAGAGAAAAATTGCAAACAATGAGAATACAGAAGTTTCTTCATATCTGAAGGAAGATTCAGATGATATAAATGCATTGCTCAGCTTGGAAGAGGAAGAACGTGAGGAATGTGATGAAGAAGAGGTGAGCACTGCACGCACTGATGCAAACTATGGATGCAGTTCCCCTGAATCATACTCAAACTATCATTGTCAATCCAAAAAGAGCAGGACCTCTTCTTTCAGGGAATCCTCTGGTAGCAGTACTAGCAATTGCAGTGAGAGAAAACGCAGGAAACTTAAGAAGATGGTCAAGGCATTAAAGGGAATCGTCCCTGGTGCCAGCAGGATGAATACTGTCACCGTTCTTGATGAAGCTGTCAGATACCTCAAGTCACTTAAGGTGGAAGTGCAGAAGCTTGGAGTCGATAATCTGAAGACATATGCCTGATATCCTTTGTGGTATAGGTAATTTCGCTTCCTTTATCACCGTCACATGATTATGAACCCTAGTCATATCTTTTGCTTATGTGAAGAAGAACTACTTATACCGTCGTATTGCTGAGTTGCTGCTCTGGAGGGGGTAACGTAACGTAGAATATGGTCCTTTGTCCAGCGATAGGACAATAAGTCTGCTGTAGTAGCTAGCTGCTATATCTAATTTCTCATTCTAGCATATAGTATGTTTCCACTAGTTGCAAACTCTATTAAGGCATTTGAATAATTTCTCCAATATGTGACACTCTTTCACCTATTGGAGCTGCTATTTGTTATTGTTGTTGTATGACTTTGATGATTTGTTTTAATGGATAATGGGTTGATGATTACNCTTTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567931" ref_strand="+" ref_description="SGN-U567931 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157359019|emb|CAO66921.1| (e_value=1e-14) unnamed; ">
      <seq>tggtagtcccctccctacccctaacccctaccccctctcttcactcgcatatcccaataacaaaccacgagcttctgcttcaacatttgcatctgacactcacctcttccctctctagaaaaaaaattcagaaaatctagtgaagaaacaacaaagatctttttttttttttttttcatttggtggcttggattgaagactataatatactgcactggaccaatcaacatgccgtgggcattttcttctctgagttattgtgtgaagtgtgtgcgctttgtggtattctttcgtgtgattctgtaacccatttcacttgattgcggaatcactttattttctgtcttgtgatatttcttgatactagtctatttggaggttgagaatgtacattgcgattaccttgaagagatacagagcagttaaagaagctggtgagattaaaatgcatgtggggagtgttgcttattaccaattgatgctagtttgtcaggctgagtacttccgtcagttgcttaaacctgtaacgtagtctgctaaagtgtaagctttggggaggttgggattgcttacttcttgttgctcttattcagcaaagcctgttgaagttgggattttttgcttctctttcagtgtatacgaaatcagaatgacctcattaagcactgaatgtggttactgttgattggaattgtcagtgcttttttactacaactaatacaccttgaacattactctcttttgcctgtgcctttcgtaactcttagctactttcatttttaaaacatcccaagtggaaaacacttttctagtccagtttattggatctttgacttagttactcatgcagaataactatcaattttcccctcaaattcaaaagccttttgtctctctggaagaccaagcagctggtggtaatatatttgatattcctgttccatccgtctttgatacaatggcacttcctactagtttcaaatcttctgtgccctttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="48271" stop="45084"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47971" g_stop="47792" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47791" i_stop="47191" i_length="601">
            <donor d_prob="0.588" d_score="0.87"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47190" g_stop="47055" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="319" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47054" i_stop="46645" i_length="410">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46644" g_stop="46471" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="493" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46470" i_stop="45890" i_length="581">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45889" g_stop="45384" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="999" r_length="506" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U567931" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>996</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U567931" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47971" e_stop="47792"/>
          <exon e_start="47190" e_stop="47055"/>
          <exon e_start="46644" e_stop="46471"/>
          <exon e_start="45889" e_stop="45384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTAGTCCCCTCCCTACCCCTAACCCCTACCCCCTCTCTTCACTCGCATATCCCAATAACAAACCACGAGCTTCTGCTTCAACATTTGCATCTGACACTCACCTCTTCCCTCTCTAGAAAAAAAATTCAGAAAATCTAGTGAAGAAACAACAAAGATC---TTTTTTTTTTTTTTCATTTGGGTATGTTCAAAGTTCTTTTTTTTTTTTTGGTTTAGATTTGTTGCTTTAGTCTTTGATTTGAGGTTGATTGTGTTGTTTCTTTTTTTGGGATTTTATCTGACTTGATTTGATGATTTGGGTATTTGTGTTCTTGGTTTAATTTTGTATGGTTAGTGAAGAAAGGAGAAAAATAGTATTTTTTTTTGAGGTTTTTAGATTCATTATGGTTTCTTGTATTGAATTGATCTTAGGTTTGTATTGATTCAATGATAGTGTGTGAATTTCATAGAGGGGTGATCTCTTCTACCGAACTTTTTTGCATCTATTGGTGATTTTTTAAGCATTTGTGATTTGCTGGGAATTTGGGTTTCGACAGTTTATTTGTATTAAGGAGTTTTACTGTAAAGAATATTAGTTTCCTTTTGAAGGAAGCATTGTAAGTTGGTGTTTATTTCTATGAGCTTTTATAATATTATGTTTTGCTATTTGTGTGCTTATTGATTATTATTGATATTTAGAGTTATGTTTTGCTATTTGTTTGCTTATTATTGTTAAAGATGAGCTATTTGTGTTCTTATTGATTATTATTGATATTCGGAGTTGTGTTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTGGTGAGATAGCCTCTTGTATTTCCTAAATCTCTATCTGTCTCTTCAGCCTTAGATTTTATTTGTTTCTATGTAACTATTGCACCTTCGAGATAGAGATAAGGTCTGGGAATGTTGTTGTTGTTGTGGTGTGTAAATATTGCGGATTAACTATTCCTGTTGAGGATTTACTAAAACAGAACAGTAATGCCCAAGAGATTAAAAAAAAACTTATTGCCGAAAAGTATTTAGAAGAAGATAATTTTAGTTGGGTTGACAATAGAGAAATGGAAATTAAAGTTGTATTACTCGAGTGTTATTCAGGTGATGGATCCATTAGTTTTACAGTGGTTCGCTACTCACTTGAGAAATAAGTTTTGCTTGTATTGATGTTCTTTAATGTTTTACTCATTTGTGCTTGTTTGGTATGACAGATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGC-TTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCA</genome_strand>
        <mrna_strand>TGGTAGTCCCCTCCCTACCCCTAACCCCTACCCCCTCTCTTCACTCGCATATCCCAATAACAAACCACGAGCTTCTGCTTCAACATTTGCATCTGACACTCACCTCTTCCCTCTCTAGAAAAAAAATTCAGAAAATCTAGTGAAGAAACAACAAAGATCTTTTTTTTTTTTTTTTTCATTTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTCACTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCC-TGTTGAAGTTGGGATTTTTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTCATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581846" ref_strand="+" ref_description="SGN-U581846 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157359023|emb|CAO66925.1| (e_value=2e-48) unnamed; (*ATH) AT1G53530.1 (e_value=2e-43)  Symbol: None | signal peptidase I family protein, contains similarity to SP:P28627 Mitochondrial inner membrane protease subunit 1 (EC 3.4.99.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00461: Signal peptidase I | chr1:19981821-19983751 F... ; (*SWP) sp|Q9CQU8|IMP1L_MOUSE (e_value=1e-26) Mitochondrial inner membrane protease subunit 1 OS=Mus musculus GN=Immp1l; ">
      <seq>tcaaacttaagggactactatagaaaatatttttctcaactttctctacaccggagaatgcacaattagaccaccaaattccgggctgtgttcgctgtgcgtcaatcggagattgcacaattaaatagcgggggccgtgttcgccgtcgagtagaggtcggggttactgtggtactctttcgcctgattctgtcatccattttaattggtgagatagcctctttagggttgagatgcagattgactaataatgggtctgaaaaatctgaagcaattgacgccttttatcaaagaagcatttcagcaaacattactcgtagccaaattcctctgtggtattcatgtggtcaacagctatatctgcaccttagctctcactcaaggtccaagcatgcttccaacgtttagtctgactggagatcttgttttggctgaaaggctatcaactcggtttgagaaaatgcaacgtggagatgtagtgctagtgcgtagccctgagaacccgagaaaaattgtgatcaaaagaatcatgggcatgggtagtgatactgttagatatgttgtggatcatgcaaataatggaatagaacatactattgtggtaccagatggacatgtttggattgaaggggataacaaattcaataccaacgattcgaggaactttggacctgtaccttatggacttgtacagggcagagtcttttggcttgtatggcctcctgaaaattttggatcagtaggaagagaagtacagtaaatcaacctttcaagatttggagtatgcttgtagagtattctctcacaagcctggattttaaacaatttactgaagatggcaactggtgggttgctttactacttggttcgaggtggaagacaggacgcaagagctgttaaatatattcggttaatgtatttctctaactccaaagggtgcacgggtttgcataattttgctcttgaagtgccactgctaatgcattagctcgaaggcttctttttctattttactttgtcgttgttcttctttcaaaagagtcgtttggactaatgggatttggcagtcacttctcgtataaacttgagcctttgtagtcagtgttaccgctgggaagttacatgtacctggtctctaaggtgcaggcaagctttgccaaaacacagcactacattttaattctcatttttctgatagttacatgttcctttaaataatacagtagtaaattttttaattttaattaactgatgtatatatccaaaagctaggagttaagctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="54108" stop="57807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54408" g_stop="54783" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54784" i_stop="54897" i_length="114">
            <donor d_prob="0.819" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54898" g_stop="55122" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="601" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55123" i_stop="55296" i_length="174">
            <donor d_prob="0.845" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55297" g_stop="55407" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="712" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55408" i_stop="56130" i_length="723">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56131" g_stop="56192" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="713" r_stop="774" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="56193" i_stop="56999" i_length="807">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.798" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="57000" g_stop="57508" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="775" r_stop="1284" r_length="510" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U581846" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1283</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54408" e_stop="54783"/>
          <exon e_start="54898" e_stop="55122"/>
          <exon e_start="55297" e_stop="55407"/>
          <exon e_start="56131" e_stop="56192"/>
          <exon e_start="57000" e_stop="57508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACTTAAGGGACTATTGTAGAAAATATTTTTCTCAACTTTCTCTACACCGGAGAATGCACAATTAGACCACCAAATTCCGGGCTGTGTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCTGGGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTCGTACGATAGCTTAACCAGTAGTACTATACTGTTTTCTTAGTTTACTACTTCATGCTTTGGACCAATTGCACTGCAATTTTTAAATCTGTATTTTGTTTCATATATTTTGGGCAGACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCTAGTGCGTAGCCCTGAGAACCCGAGAAAAATTGTGATCAAAAGAATCATGGGCATGGGTAGTGATACTGTTAGATATGTTGTGGATCATGCAAATAATGGAATAGAACATACTATTGTGGTAATTCAGAATTGATCAAATACCTTCATTTACAACTGATTTTCTCCTCTTTTGCAGTTGGTAAATGTTTGTAGTTTACTTTCAGGAGCTAATGTAGTTGGGTTTTTGCTGCCCTATTTTCTTTGCGCCGCTCCACTTTTGTTTCTTAGGTGAATATGCTTTGAATGTGAACAGGTACCAGATGGACATGTTTGGATTGAAGGGGATAACAAATTCAATACCAACGATTCGAGGAACTTTGGACCTGTACCTTATGGACTTGTACAGGGCAGAGTCTTTTGGCTTGTCAGTAATTCTTCTCTATTTTAATTTTTAGCTAATTTGCCAAACTGTTAGGACTTTATTATATTTTGGAAATATTTTTTGCTTAATTTCGTGGAACTGTTTTCGAAGGTATGTTTAACGCCATCATATTGCTGTCCTTATGCATGCCATTTGATGATTATGTTTAAGACAATTTTTAATTTTTTTAAGTTTGAATTGGTAAGTCAGATTTTTATCTTTGTATTGTTTGATAAGATTAAAAGAATAGCTAAGTCTCCTGTAGGACTTGCCAGAAGGAACACCTGCCATAGGAATCATGTCTAGCTTGTGCATAAGCAGCATTTTCAGGGGATTCTATTGTGCTAAATAGTGTGTGCGCTGATTTTATTGGTACTGTTTGGTACAATTTGGTTAGTTAGGGGCTTAAGGCTAAAATCTCTACATATATGCATAAGCACACCTAATCTTGTGAACGTGTTTAATACTTCAGGTTCTTGTAGACTAGTTGATACTTGTGAAATTCATCCAATATGTTTTATGTTTCTGACTTGAATTCATAAACCAACAGATATGTCGCTAGCTATTTCTGGAGAGTCATCTTCAATTAGTAAACTAGGAACGTTGTAAAACAAAATGTGTAACCTTTTTGATCTTTTTTCCGTATTTGAAGTACTTGTTTGTGCAGCATTCTATCTTTAATTTTGCTGCGTTGTAGAAATCTTAAAGTTCTGATGTTGTCATTAGGTATGGCCTCCTGAAAATTTTGGATCAGTAGGAAGAGAAGTACAGTAAATCAACCTTTCAAGGTATGCTTGTTTAGAATTTCATGCTTAATATGTTTTTGCTAATTAGGAGGTTGGATCATTTGTTATGAACTTGTGCCATTGCTTTGCAATGTTGTCCTCATTTCACTTTGATATTTGCCTTCATTTCGTCACTGATTTGATTCCTGTGTTCTATATTTTTTTCTCTTTATTTTTCCAAATTAGTCTTAGTGAACTATTTATGCTACTGTCAATTTTTTCAAGAACTTATGAGGGAGGAAGTTATGTGAACTTTATATGTGTTAAACTTCAAGTTCTCACTTAATGAGAGGTAGCAAAATGTTTAGGAATCAAATATTGTGTTTAGGTTTCTTCCTAGTGTTTTTCTTTCTAAAAGTTTTCTGTTTTCTCCCCTGGCTAATTCAAATTTCCTCCTAGTGGTTTTCCTTGTAGAAAATTTGCACATTTTCAGACTAAGCTTCTTGTTTGCTTCATGTTTTATCTAGCGTATTACGTCCAAATGCTAGTTGTATATTTTTGGTTGTGACTGGAAAAATGTGTGCTTGGTAATGTATGACAAGACTATGGCTCGTAATAATGTATCCTCTGCATAATATTCTGATTTTTGTCATGTTTAGTTCTATAAGAATAATATAATGCTGGCATGTGATGAATTTAAATGTAGAAACCTGATAGGTGAGAATTTATATAGCTGATCCCAACTTGTATGAGAAGGTATATATGTGTTGTTGCTTCCCACAACAATGACATATGATTTTGTTGGACCTTGTGATAAACCTGTTTTCCTTGTTGGTAGCTAAAACCGGTTAATGGACTTTACCTTGGCAGATTTGGAGTATGCTTGTAGAGTATTCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAGATGGCAACTGGTGGGTTGCTTTACTACTTTGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTTAAATATATTCGGTTAATGTATTTCTCTAGCTCCAAAGGGTGCACGGTTTTGCATAA-TTTGCTCTTGAAGTGCCACTGCTAATGCATTAGCTCGAAGGCTTCTTTTTCTATTTTACTTTGTCGTTGTTCTTCTTTCAAAAGAGTCGTTTGGACTAATGGGATTTGGCAGTCACTTCTCGTATAAACTTGAGCCTTTGTAGTCAGTGTTACCGCTGGGAAGTTACATGTACCTGGTCTCTAAGGTGCAGGCAAGCTTTGCCAAAACACAGCACTACATTTTAATTCTCATTTTTCTGATAGTTACATGTTCCTTTAAATAATACAGTAGTAAATTTTTTAATTTTAATTAACTGATGTATATATCCAAAAGCTAGGAGTTAAGCTAG</genome_strand>
        <mrna_strand>TCAAACTTAAGGGACTACTATAGAAAATATTTTTCTCAACTTTCTCTACACCGGAGAATGCACAATTAGACCACCAAATTCCGGGCTGTGTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCGGGGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTC..................................................................................................................ACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCTAGTGCGTAGCCCTGAGAACCCGAGAAAAATTGTGATCAAAAGAATCATGGGCATGGGTAGTGATACTGTTAGATATGTTGTGGATCATGCAAATAATGGAATAGAACATACTATTGTG..............................................................................................................................................................................GTACCAGATGGACATGTTTGGATTGAAGGGGATAACAAATTCAATACCAACGATTCGAGGAACTTTGGACCTGTACCTTATGGACTTGTACAGGGCAGAGTCTTTTGGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGCCTCCTGAAAATTTTGGATCAGTAGGAAGAGAAGTACAGTAAATCAACCTTTCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGAGTATGCTTGTAGAGTATTCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAGATGGCAACTGGTGGGTTGCTTTACTACTTGGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTTAAATATATTCGGTTAATGTATTTCTCTAACTCCAAAGGGTGCACGGGTTTGCATAATTTTGCTCTTGAAGTGCCACTGCTAATGCATTAGCTCGAAGGCTTCTTTTTCTATTTTACTTTGTCGTTGTTCTTCTTTCAAAAGAGTCGTTTGGACTAATGGGATTTGGCAGTCACTTCTCGTATAAACTTGAGCCTTTGTAGTCAGTGTTACCGCTGGGAAGTTACATGTACCTGGTCTCTAAGGTGCAGGCAAGCTTTGCCAAAACACAGCACTACATTTTAATTCTCATTTTTCTGATAGTTACATGTTCCTTTAAATAATACAGTAGTAAATTTTTTAATTTTAATTAACTGATGTATATATCCAAAAGCTAGGAGTTAAGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595923" ref_strand="+" ref_description="SGN-U595923 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359023|emb|CAO66925.1| (e_value=5e-17) unnamed; (*ATH) AT1G53530.1 (e_value=4e-15)  Symbol: None | signal peptidase I family protein, contains similarity to SP:P28627 Mitochondrial inner membrane protease subunit 1 (EC 3.4.99.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00461: Signal peptidase I | chr1:19981821-19983751 F... ; ">
      <seq>gttttctgggcgtcaatcggagattgcacaattaaatagcgggggccgtgttcgccgtcaagtacaggtcagagactacttcatcctctttcgcctgattctgtcatccattttaattggtgagatagcctctttagggttgagatgcagattgactaataatgggtctgaaaaatctgaagcaattgacgccttttatcaaagaagcatttcagcaaacattactcgtagccaaattcctctgtggtattcatgtggtcaacagctatatctgcaccttaactctcactcaaggtccaagcatgcttccaacgtttagtctgactggagatcttgttttggctgaaaggctatcaactccgtttgagaaaatgcaacgtggagatataatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="+" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="54197" stop="55304"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54497" g_stop="54783" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54784" i_stop="54897" i_length="114">
            <donor d_prob="0.819" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54898" g_stop="55004" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="394" r_length="107" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="+" ref_id="SGN-U595923" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54497" e_stop="54783"/>
          <exon e_start="54898" e_stop="55004"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCTG-GGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTCGTACGATAGCTTAACCAGTAGTACTATACTGTTTTCTTAGTTTACTACTTCATGCTTTGGACCAATTGCACTGCAATTTTTAAATCTGTATTTTGTTTCATATATTTTGGGCAGACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCT</genome_strand>
        <mrna_strand>GTTTTCTGGGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCAAGTACAGGTCAGAGACTACT-TCATCCTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAACTCTC..................................................................................................................ACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCCGTTTGAGAAAATGCAACGTGGAGATATAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595196" ref_strand="-" ref_description="SGN-U595196 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=2e-13) unnamed; (*ATH) AT3G59090.1 (e_value=2e-12) | Symbol: None | expressed protein | chr3:21850179-21853732 FORWARD | Aliases: F17J16.140; ">
      <seq>attttataggttcttctataccttcagcatttgtgctatgggtgatgagagaactaccacctccacttgtcactttcagtcaacaggagtcgaggacaatagcttttataaatgacagttcagcgacagtacagcctcagcgatggacagctgctgcaagtgtgcaaaatcaggtctcaagggcgagccccatatgatcaccgtgatggaatttgtaaattgattggtgattttcagctagagtgaaggactgacaatactaaaaatgaaagaacttctcagttgagtggtcggtgttgtggttgagtgatcgaagaaagctcaactcaacggataaaaaataccccttgcaactaaggtggttgctcagggtacacatgcctgcataacttggattcttgtacatagcaatgaactttctaaattttacagattctttttcgttgatataatgaggttttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="59030" stop="57498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58730" g_stop="58558" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58557" i_stop="58092" i_length="466">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58091" g_stop="57798" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="463" r_length="290" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U595196" ref_strand="-">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595196" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="58730" e_stop="58558"/>
          <exon e_start="58091" e_stop="57798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCCAGGTTCTTCTATACCTTCAGCATTTGTGCTATGGGTGATGAGAGAACTACCACCTCCACTTGTCACTTTCAGTCAACAGGAGTCGAGGACAATAGCTTTTATAAATGACAGTTCAGCGACAGTACAGCCTCAGCGATGGACAGCTGCTGCAAGTGTGCAAAATCAGGTTTCTTGCCTTCTTTTAACTCTAATGCACACCTTGTTTGTTGATTTGTCTCTAGTCGTGTGCATCATGATCTTGAGTAGGGAACACGTAGAAAATGCATGTTCATTTACAAGGGCTATAAGCCTATCACTGATTAAATGAAATGGAAAAAAGTTCAAGACGAAGCAAATAAATTATTTATCTCCTGGCACATTACACTAGGGATGGGGAAATCATGGTAAGTGAAGCTATGGCTACAAATCATTTTAGCTGTCCATTAAATTTTTCGTTAAGATCCACCAACTCACCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAGCATTATTTTTAACCTCACATCAAAACCCAAAAGAGAATGTGAAAGTAGAGTGCAAAATCAATGAAGAACTCTTTTCATTATCTTACACTAGATGGATTCACAAACTTGTACCAATGTGTTCTAAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCACCGTGATGGAATTTGTAAATTGATTGGTGATTTTCAGCTAGAGTGAAGGACTGACAATACTAAAAATGAAAGAACTTCTCAGTTGAGTGGTCGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGATAAAAAATACCCCTTGCAACTAAGTAAGGTGGTTGCTCAGGGTACACATGCCTGCATAACTTGGATTCTTGTACATAGCAATGAACTTTCTAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAG</genome_strand>
        <mrna_strand>ATTTTATAGGTTCTTCTATACCTTCAGCATTTGTGCTATGGGTGATGAGAGAACTACCACCTCCACTTGTCACTTTCAGTCAACAGGAGTCGAGGACAATAGCTTTTATAAATGACAGTTCAGCGACAGTACAGCCTCAGCGATGGACAGCTGCTGCAAGTGTGCAAAATCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCAAGGGCGAGCCCCATATGATCACCGTGATGGAATTTGTAAATTGATTGGTGATTTTCAGCTAGAGTGAAGGACTGACAATACTAAAAATGAAAGAACTTCTCAGTTGAGTGGTCGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGATAAAAAATACCCCTTGCAAC----TAAGGTGGTTGCTCAGGGTACACATGCCTGCATAACTTGGATTCTTGTACATAGCAATGAACTTTCTAAATTTTACAGATTCTTTTTCGTTGATATAATGAGGTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587655" ref_strand="+" ref_description="SGN-U587655 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=5e-16) unnamed; (*ATH) AT3G59090.1 (e_value=2e-25) | Symbol: None | expressed protein | chr3:21850179-21853732 FORWARD | Aliases: F17J16.140; ">
      <seq>ggtgtccacgtttttttctctgtattagaggggaaagggctaagaaggattgaggcagtggatggttttttaaaaggtaaagaaaaagagtgagaagaacatgattgagtggagagaagggacttgttatcctaaggctttaatgggagtgaatgtgggtcttgcttctgtcgatgccgttattgcagttcttgcttttgctcagttaatgagaattcactctcggaatacacacaatggctggactcgtcagaaagtatttcacttgatgattggatcttcaaatttggctttccccaaaattcttttccttgcggcatttcttcttctcctttctttctgtcaaatgatgaagaagatgaagatgatgtatatagccctcgagaagctttgttggagaagaacaagccaaattcaaatgctgatagtcgccgaagatgctgctcttttcgtgctgtcaaagtgggaagccgccaaaaagttgtggttctggttaccctgttagtttttctgttaatgttggtagctgctgtactaatatggattgggaggggaaggaaccctattgattcatctgttgtggctcgggtgtatgtagatctctttgccttagcagttcttttgctgggagtggcattggcatgctatggactggtattgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="71857" stop="59710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71558" g_stop="71354" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71353" i_stop="67300" i_length="4054">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67299" g_stop="67249" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="256" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67248" i_stop="65176" i_length="2073">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65175" g_stop="65142" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="290" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65141" i_stop="63352" i_length="1790">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.568" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63351" g_stop="63300" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="342" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="63299" i_stop="62084" i_length="1216">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62083" g_stop="61934" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="492" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61933" i_stop="61348" i_length="586">
            <donor d_prob="0.812" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="61347" g_stop="61252" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="588" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="61251" i_stop="60684" i_length="568">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.040" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60683" g_stop="60623" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="649" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="60622" i_stop="60025" i_length="598">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="60024" g_stop="60010" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="664" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U587655" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71558" e_stop="71354"/>
          <exon e_start="67299" e_stop="67249"/>
          <exon e_start="65175" e_stop="65142"/>
          <exon e_start="63351" e_stop="63300"/>
          <exon e_start="62083" e_stop="61934"/>
          <exon e_start="61347" e_stop="61252"/>
          <exon e_start="60683" e_stop="60623"/>
          <exon e_start="60024" e_stop="60010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAGGTACTCTTCTCTCCCCCCTGTTCTTCATTGTTTCAGAGGGTGTTGTTATATATGTGGAGTTTCTGCTAAAAATTCTGTATTGATTATTGGAATTTTTTGTGTTGGGTGTTCGTTTCTTGTTCCCAATTTGGGATTTTGGGAATGCATTCCAATTGGGATTTTTGAAGGGTTTTAATGGATTCTGAATGATAATCTTGTTTGTGATGGGCAATGGAAAGGTGCTGTTTCGGCTAGGTTTGTGATATTGATTGAAAAATTGAGTCCTTTTGCTAAATTTTCTTCCTGTGGCTTATTAGTTTCTGGTTTCTGTGTTGTCAATTCCGTTAATATGCTTGAATTCGAAGGAATGTAAGTTCATTTGTCACAATGGGGTTAAGTTTTTTGCTTTCTAATTTATCATGGGTTTATACAGACGCATTTTCTTGAGACAGTTTTCTGCCATTGTCATGCATAGTTTAATATAATAAGTAGTGTATCTCTTTGACAAGTTCTGCTGAATTTAGTAATTTAAAGTTGCAAAGATTCGATTCGAAGAGACCAAATGTAATCTTGTTCTGAATATGGATTTTCTGAAGCAGAAAGCTTATTTTTCACGGGGACTTTGCCATAGATCACTTGCATAGCGATTTTTACTATGATTTCTCTTCCTCTTCTCTGGGAGGAGTAGGATGCAGTTTTTCTGGGCCAAATTGTGATATGTTTTGTCATATAGGGCTTGCAGCAACATTTAGGGAGTTATCGAGAAGTGATTTTCACTGTTTTGAGGGACTTTACCAGTATTATGGCATTTATGGCCAATATGATTACCCATGGAGATTGCATTAAGTATATGATTATTATCTCCACATTCAATAGATTTTGCTGCATTTGGTGAAAATGGTTAGTTTCATTGTTACAATACCATCTAAGATACTAGCTAAATGTGGAACTTTTGAATCATTGGTATTCGTATACCCGCTCTGCATTTGTGTAGGTGAACATGATTTTTGATGTCCTTGAGAATGGGCTAAAATTGGGATTGTTCTTGAAGCAGACTACTGGGATTCAACCATGTGTTGTTTTTCTGTTAATGCTTATCAAATACCATATTAGTCCTACGCTTGCATATTATTTGATTAAAAATGGAATAAAAAACAATTTTATCTGAAATTATATTGTTAAATGATTCTCGGAGAATCAAGAAGATTGTGGGTACTAATTTTATTCATGACAAAGAGATCTTATATGTTTGAGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGCCAGCGAAAGCAAGGGGTATGCCTTCTGGGTCGAGATCGCCTGGTGCGGGTTACCTCTCCTATGTGGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTGTGCGCACCCAAAAGGGTAGTAGCTGCGGGTTTCCCTTGTAGTAAAAAAAAAAAAAGAAGAGAGATCTTATATTTCAATTTTGGACCAGAGATGATACGTGTAAAACTCTTCTTTCTCATTGAGAGTGCAAGATATCATTCCAAAGAATAGTTTGAAAGCTATTCAGAAAGTAGCCAATTTTTTAGAGCTAATGGCTCTTGTTTAAGGCAGGAGAGTACCTTGCTTTTCCTTTTGAGATATCCGGTACTCTAACAGAATTTTGTGATCCTTTTGTTCACTATCCAAATGCAGTTAAAGCAAAAACTTGGTACGTTGGGATAACCTTTAATTGAAAGCTAATATGGTGTAAGCATAACTCAGGGTATGGATCTTTTTTTCCCATCCATGTTGTTGTCAATGCTTCCTGAACTGCAAACCGAATCTCCAAATATCTTCCTTACTCCTCCTCCTTTAGGCATGACCTCTTTGAAGGTTTTTTTTTTCTTTTGATGAAGTAATTAGTTCTATTGCAGGCATCAAGTAGATGCATAATAGTTAGAAAAGCTTAGTAGCAAAAGGTCAGCTCTCCTTTACATTGTTAATTGAGAATCAGGGAGCGGACATGGTTCAGAAATCAGGGCAATCTAGAGGGGATAAATAAACCCAACTATACAAAAACATGAGGCAGTTAGCTTTTAAAGATTGGTAGGTAGTTGATTCCATCAAAGCATCTTCTATTCCTTTCGTTCCAGATACTCCAAAAAATGGCTGCAGGTATCTTTGAAGGTTAACTGACGTACCCCACTTCATATCCCAAGATCATGGTGGATGATGGTTAACTGCAGTGAGGAAGCATTCCCTTTTTCTAATTATTTTTTAAAAAGTCTACTTCTTAAGAAGAAAAAGACATTGCAGACCTGTATCAAAATATTTCATCACTGCTTGGTGCAGCTTTCTGCGACTTAGGTTGCAACTTTCTCCAGTTCTTCTTCTTCAAGCTCCAGCTATGCTGTGTTGCTGCTTCTTCTTCTTCTTCTTCTTATTATTATTATTATTATTACCATGCTGCTATGTTTTTTTTGCTGCTGCTTTCTTTTTTTCTCTTCTCTTGTTTCGGTCTTCTTCAGCTTTTATATTCTTTATTTGTTTCTCTTTTTTTTCTTCTTCAGTATGTTAATTTATTTGGATTTTGTTTATTTGTTGTCTTCTTCTTTTTTTTTCTTTCATGTGTTGCGTGTACTTCTTGTGTCTAATTTTAATTATTTTATTTCCATTTTCTTCTCATATTCATTTTATTCTCTTCTTTTTCAGTAGCTTTTTTTGAATTACAGTTGTTTTTTAATTTTTTGTTCTCTTAACAGCAATTTCAAATGGTATCATCTGAGCAAAATAGAGCCATCAATTTTTTCAATGGCATCATCCATTTATGTTTTGTTTTTTATTTTGCTTGTTCTATCAAGCATTTCTGGCTATCAACTTTCTAGTTTTAAAATTGAAAGATTTGCTTCTATATATTATTTCTGTTGATGTCTTTTTTGATTTAGTTATTTTACTCATATGTGCGAGGTTTATTTTATTTTTGAAATGGTGCTTCACTTCAATGAAGAGAGTGAAGGGAGCTTTTGTTGCTTTTTTGCGCTTCATGCTCTCAAAAACACTGCCTCCCAGCAAACTACTCTATAATTAGTCCAAGGGGAGGGCTAGATTGGTTTTCTTCTACAAGTATAAGTGTCTTCTCCTCATGTATCTTGATTGGTTCAAGATGGAAATCGTTAAGAGTCCCTTGATTATTTGTCCCACTTGAATAAAGAAATTGTTTCTTCGGCTTGGTAACTCTTAAAGGAGGTGTTTGACACATCCCTCGGCAGAAGATGTTACATATGCCTTGTTTTTGCATTGCTCAGTTGCAGCCGATATATGGAAGTATATTCCTGTCCTTTTGTCATTCAATGAGTTATGCCTCATGGTCATAGCATAAAAGCACATACATAAGTGGGGACAATAGAATGTAAGGGAACAATTAAAAAGTTTTGACAGACTGTTCCAGCTTTTATTTTATTTTTTGGTGCCTATGGCTGGAAAGAAATAGCAGAATATGCTTCTCAAGGAGCCTCTTCTCCTATTCATGCTTTGAAGTATGGATGTCTTGGGAACATTTTTTTCTGGAGTAACCATTATATTCTGAATAATTTTGACCAGCTTTTACACTTTGTTAGCTCCTTAGGCGGCATAAAGGAGGATCACTGTTTAATTTAGGTGCTTGCTTAATATGACTAGTTGCTAAGATTGAAAACCAGAGAGGCAGGGGGTGGGGGTTGTGGGAGAGTTTGATGTTGTCAATGAGTTATCAGCATTCAACTACAATCTAGGACCATTGTGAAGATGAGGAATGAATCGAGCAGAGTACTTTTTGACACCAACTGGGTGACTAACTGAAAAAGAGGAAACCTTAATCTAGCTCAATTCTAACCTTGGGATACTGAAGCAATCGAATGGCTGCAAACCAGTTTGGTGCTTCTGTTTAGGTTGCTGCTCGTGCCTTCCGTGGTTGCATAATATTGGTGCAACTCTATTAGAGTATATTCTTGTGCTGTTAATGACACTCACATTTCCAGTGTGGTAGTGATAATTTCTGGTTAAATAGATTGTGCCATCATATTTTTGTGCAACTAAACTTGCTTATCTATTTTTCCAGTTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAAGTAAGTATTTCATCCTCGATTCTCTTGCTGATTTTATTGGTATCTGAGCTGGATGAAAACATTCTGTCCCTCCTACTTTAAATTAAAGTACTTTCCCAAGGTTTAAGTAATTATTGAACAATGTGAAAGCAGGCCAATTTGCTGCCGACACTTTTTGCCTAGTTCCAATTATGAATAGCAAATATACTAATGAAGCATGTTGCTAGATGCTTATATGCGACCGACTTTCCCTTTGATACCGAAAGTTACTGTGATTTGGGTGTTGTTAATTCTCTTTGGGAATTGCACCGAGGGTGTGGCCTAACTGTCAATGAAGATGAAAACCATGGAACATAGAAGAGACAAAGACTCCTAAGTGAGTTCTTCCCATTTGCCTAAGCCTCAGAGGGTAAAGTTACCCTGTATTTGTGTTGGTGTGCGGTAGTCGAAGTGCTCGCAAACTGGTCTAAACACCACAATTACAATAATAGTAGTTTTCTTCGGCAACTAAGACTTAGGTATGCATGTTCATGTGTGTAATCATTTGTATCTTTACATTAACCATAAGTGACAAGGATAAAATCGTGGAGGAGGTGTGCGTATAGGGAGTATAGTTTGAGTAAATGACTGGTTATGTGAGCTCTATTACTGTTGGTACTTGGTATTATTTTATTTTATTTTTGCATACTTATTAGGAACACTTCCCTCATCTGTTTTCCTTCCAGCCAAGCTCCTCACTTATGTTGCCGGTTTACCTATTAAGAGTGTAGAAGAGAGGAGAATGTGAAAAGTCCCAGAACCCATGTTGATGATATTCAACTAAATACTCTTGTCTAAACCATTAGTATTATAATGTTCAAAACGCGTGCCTAGCATTTACGGTTCAGGTGACTTATCATCTCTTTTTAATAATATTAGATAATTCAGGTGACATAACAGTGGTCTTCAGAAGCGAAAATATACTTCAGATTCCTTTACAGTTGTGGTATTAAGTTGCTTCTTTCTCACTATTGCCATAGTAATGAGTAACGATCCTTATCCTCCGTTTCTACAACTTGATAACTATTACCTAAAATTTTCTTTTTTGATAACCATTGCCTAAATTACTGTTCATCATGTAGGTTTTCAAAATTTTAGTATTCATACCAGGTTAGTCTCCAATTTTTTCCATGTGATCTAGTTGTACTCTCTTAATGTATCTCTCTTCCCCTCTCAGTCCTCTGATGAGTACAAATCCAAACTTCAGGATATTAAACCCAGCCTAATTACTTGGCCATTATGGTATTAGTGGTTCATTTATGCTCACATCTAAATTCTTTGGTGTTAGAGATGAGGGGTGTCTATGCTCAGTTCTTGGTGCAAGATCAGTCTATTGATGATTGACCATGGAGGTTTTACGAGTGTGATAATGGTGATATTGAGCTCTGTAACAGTCAGGGTCATAGTAGTGATCGTCTTGTGGAGTTAACCGGTAAATGCTGGCCACTGCTACGTTCTACCATGTTAACTTCCAGCCAAGTGGTACAATGTGTAGTGCAGATTGGGTTGAATATTCTGGTGATGTTACTTCTTCAAAAGAACACAAATGCATCTTTGAATAGCTGAAATTAGTGAATATCGAGGAGTCTTGTTCTGCATGAAATGATCCAAGTATGGTGCAACAAGACGCTTCTTCCACTCATTTGAAGGCACTACCAAAAAACGAGAGTCAGTTTACCTCCTTGTTCTTCTAATACCTGACTGTGAAGTGGCGCATGCTTGATATACCAATTGGAAACGAAACTGGGCTAAACTTGATAATATCTACATAGACTAGCTCCGTGTAATAACAAATAAAAGACTTCATCAACTCTGAGGTAGCACTACATCTCTTGGAGGATATACACATATATTAGAATTTGGAAATATATTGCCTTAATTAGTTTAGTTTACTGCTATGAAGCGACAGTCATCAAGATTTTTCAATGATTCTTCTTCCTTTTGTCCTGGTTAGCCTTAAAAAAAATTCTTTAGTAGATTCAATGAGGCTTCCTTCTTGTTCACTTATGTGCTAATTACAAATCATGCTTACTGGACTTCGCTATGAAATTGCAGGTATTTCACTTGATGATTGGATCTTCAAATTTGGGTAAGCATCTTATTTTCTCTGTTGTATCATCATTCTATCTATGGATTATTTTTCCCTGAGATCTCCCCGGGAGCTCTTATCAAAAGAAAATATTTGCACTCTTACTCATAATATTGAGTTTCTTAAGCCAATTGTTGATGCATATTTTGTTTTGAATGCACATGGGAGAGATTAAATAATGTGAAGCACAAAATGATAAGCAATTTTAAGAGTTAATGCAATGATATGACTTAGATTAATTTGGAAAATATGAAGTTGGGCAAGATTAAGTAATATGTCGCTTTTCTTTATCATTTATGGGAATACAAGCTTCCTGCAAACCTTTCATCCATATGGGGTAACTGAGTTTTTTTTGAGAAAGGTAAAGTTAATTCTATATATCCACATGTATACTACATCAAAGCGTAGTCACAAGGAACAAATATCAAGAATATTTGCTAGTTCTCTATGTACAGAACTCATGGGGTAACGGAGTTTTGTACATAGAGAACTAGCAAATATTCTTGATATTTGTTCCTTGTGTAGCTTCTCACTAACATTTGACTCAATGGTGGAAGTGTTGAAAAGCAACATGTTATGCTTTAATTAAACGTAATTAAAATGTGGGTTCTTCTGAAAAATGTGCTGATACGAAGTAAGAAGGATTTTAATCTAGTGCAATCTATAAAAATAGAAGAAAGAAATATGTATCCAGCACCAGAAAACATAATTATGAACAAAAACAACTAACTCAGACAAATGAGTTGGTAGATACACAACTAGATGAGATATTTAGAGGTAAGACGATGTAAATTAAGTTCAAAGATCATGCCAGTTTTCTAATTTAGATGCAAATTTGCTGCTTTAAGTTTCTGCTGCACTGCATTCTAACTTCTATTCCTAATAGTAACAATTCATTTGTTTTGTTCTTTGTAACAAAGTAAGATATTAACATGCAGGCTGCGTTTCAGCCCAGTATTAAAATGAGTTGAACAAAGCGGGTCAAAATGAGCCCGCTTAATAAAATAAGTGGGTTATTAATCTGTCCGAATCTAAACAGGCTGGGTGGGTTATGATTTTGGGCTGATTTTATAGTATCTTGTTTTCAAAGTAAACAAGCTCAGTTATTTACCTCATTGAGTTTGAGATGACGTGTTAAAGTATCATTACTATTATTATCATATTCTTCAATTAGATCACTGGTGTTGTTTCTTTTACTTGGGTTATCTTCACTATTTTTGTTTTCAGTACTACTCTTTTCTACAATATTTTTACAATAGCTTTTACTCTTGTATATGCCAAACCTGTTTTCGAAAATGTTTTTCTTGATCCGAGGGTCTATCAGGAACCTCTCTACAAGGTTGGGGTAAGGTCTGTGTACACCCCAACCTTCCCAGACCCCACTAGGTATGTCATTGTAGAAGATCTAGCTTCTCGTTTGGTAGAAATTAAGGGCACAAAGTGTATAAGCTAATTTGGACATGGAACTTTGATAAACCACCTGTGCTCGTGTATACAATTATCTTTAATACCTTACCTTTATCTTTTATTTTTTGCTTTCTATGCATTTCATAATGATAAAGTAAGTTACTGTCCAGCAAGTGATCTGTTTGAATTTAGTTGCATTTCATAATGAATTTAATTCTCCTGCAGGTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAATGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGGGTATGTGCAAACCCGCCGTTCTTTTTCAACTGAGGCTATTTTAACTAAGACTTATGAAAACTATTTTGCAGCTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTGGTAAGTTCGCCTTCTGTTTTCTATATCCTTTAACGAGTGAAAATTATTGTTGTGAATTTAACGATTTACCTTCTTTTTATAATTCTAATTTTGAGGAAAAGAAACTAATTTATGAGGGAAATTCAGTATCATGATCTTCCTATTTTTTCTCAGTCATCTTCATTCCAGAAAATAATCTTGGGGCAGAGAAGCAGTACCTGTTGCTTTAATCAGTAAGCTGACAAAACCAGCAGTTTGCGAGACACCAAATAATGATCCTCTTTTGGTGAATAGCAGTTACTTGCTAAAGTTGCGTGACTTCACTTTCAATGCCACACCCGTGTCGGATTCTCCAAAAATCCACTACTTTTGGAGAATCCGACATGCACCCATTGTCATTTATGAAGAGTCTGAGCAACATAGGTTACTTGAGCCTAGTGCTGTTTGTAGATTATAGATACTTCTGCTCTACACCAACAAAGTTGTCACTTGTCATGTATCTCTTTTTTTTAATATCCGATCAGTGGTGCAACATTCAGTGCTTGGTTGATAATGGGCACACTCCTTTATACTTTCTCCACTTAAACAACAACAACAACAAACCCTGTGTGATCCCACAAGTGGGGTCTGGGAAGGGTGGGGTATACCGTATACGCAGACCTTACCTTACCTTTATGGTGGGGTAAAGTTGTTTTCGATAGACTCTCGGCTCAAAAATGGGAAAGAGTGTTTTACAAAACAGGTTTGAAAAATACAAGAGTAGGAGAACTATGATGCAACTATCAAAGAAAAGAAAAATATCGACAACAAAATAGAAAAGATAAGCAAAGTAAAAGAAATAACAGTAGTTCTAAATCTTAAAGAAAAAGGTAACGATACAACAAGAATTATAGTACTGATAAGTATAAGAAGGAGAAAATAATGAACTTCTCCACTTACATACCAGTTCTTTATTTGCAGTGGAATATATACCCGTGACATGCGCCTGACCCACATATCATGACATCACACACTATGTTCTCACCTTTAGACCAAAACCTTGGTGGCCAAAGTTGTCGTGCGTCTTATATCCTTTTGCACTTGAATCTACAAAAATATTACTATACAAGAACCTCTGAAATAAAAGAAAATGTGCAGGGGTCCAAGCCATGAACTCTATCTTCATGTAGAAATTAAATATTGATGAAGTCTAAAATCCTTTTCTGTAAATGAATTTAGGGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTGGTAAAGTTTATGGAATATGCGCATATAATGTTTAAAAGGCAAAATTGTGATTCACTTAGCAGCTCAGTTCACAGGCTTTAAATGCAACTGGCCAACCATGTGGCGAAAAGTCTCTTGAGATAACAACCAAATAAGTGGGGCTAGTCCCACATTTATGCTTTGTGTTATCTGCCTTTTGTGACTCCAAATATCTTTTCTTAGTATTCGAGTATAAATTCATGTTACTGCTAACTTATAAACGATGTGTTTTTGTTCTATAATTTAGTATGTGGTGAAACTATATTAAAATAAACACATCTTATTATCACTTGGGTACTTAATTATTTCTGTTTATCTTGTGCTTATGAATTATATCACATTTTAGTGGGCTTTTTTTGAAAAAAATATTTTTTTCTAAAATTCTTTCAAAATTTTTGTGCGGCATATGTCTGCGTTGTGGCAAAATCCCTACTCTACAAACCCCCTGCTGTGCCCCCACTTTTAAGACATTGTGTGTATGTTCTACATAAAAAATGACACATTGTAACTCACTGTGTTTCTCTTTTTCCAATTTGGTTCTTAATTCATGTATTTGCTTTTTGACCAGGTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTGTGGCTCGGGTATGGACCAAGGCTCTTTGATTACCAGTATCTATTTATTTGTTTTTCTTGCATATTCTGTAACCTATTTGATTTAGCAGTGGTTGGTTATTTCCAGCCTCACATATTCATTTTTAGCTGCAACCAGATTTTATAACACAATCTATTTGATTTTGGTTTTCACATATTCTTTCTTTAATCCATTTGATTTAGCAGTTGTTGGTTCTCTTTATAGATTACTTTGAGCCTCACATATTCATTTTTAACTGCAGTTAGATTTTATTACGCAAATAAGTATATACCTCTGACTTGGAGCCCAAACTATTTCTTAGTATTTATTGGGAGGAGCATGTCGTTGAAACTTGAAAGTGAGGATGTGTTCTCCTGTGAGTAAGGGTAGTTCTTGTAAAACGCGTTTCATGCTTAAATGAATTAGCATTGTTTTTTTAATTTGCTTTACTATACTAGTCTTTGGTGTTCAAATTATTGTTGGGAGAAAAGAAATTTAGACTGTTTCATGGTGATTTTTTTCTTTGCCACCTTCTCCCCACCTTCCTCTTGATAATTGATGAAGTGCAGTTTCATCCAGGTGTATGTAGATCTCTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGGCATTGGCATGCTATGGTTAGTATATCATACACTGGTATTATTTATCCCCGGTTCCACATTAATGTTCACACGTCCCAGAAAATTGTTGTCTTGCCATTTTCAGTAATATAATCTTATCTATTGCTACTATGCACCATAAATCTTTACATGGGCACTTCAGTACTTGTGTAATAACTAACATCTTGATCCACCATTTCTTCACACAATCAGCTGATGTAAAGATTTGAGTTATTTTATTTAACAATAAGGAGTGATTTACAAATGTTCAAGAGTTCTCTCTCCCTCTGTGTGTGTGTGTGTCCCCAGATGTGGGTCAAGGGGGTGGAGAAGTGATTTCAGAAATAGTTTAGACAATAAGATATGCAGGTTGATAGTTTTAGGGGGTGAATCTGCTGTCTCCCCAGAAAGACAAATTTCTCATCATTAATATCGCGATCGAATGAGTTGATTGTTCAACCAATTATCTGTTTCTCATCGAGCTGTGCGAAATTTCTAGAAACGGTTGTCGTAAAGAACTTGCTGTTTAAATAGGTCTTTTGTGTTCTAATTATTTTGTGTGAAGGTTTTCTATTCAAAAACTGTCTTTTCTGACCATACTATCTCGTCTATGCAGGACTGGTATTGTTCT</genome_strand>
        <mrna_strand>GGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTCACTTGATGATTGGATCTTCAAATTTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTGTGGCTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTATGTAGATCTCTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGGCATTGGCATGCTATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGTATTGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584094" ref_strand="+" ref_description="SGN-U584094 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=1e-54) unnamed; (*ATH) AT3G59090.1 (e_value=4e-42) | Symbol: None | expressed protein | chr3:21850179-21853732 FORWARD | Aliases: F17J16.140; ">
      <seq>gcaaattcaaagaaaaagataccatcgaggctgcataaagagaaaaaaaagtaaggggaattaggagaatatcgttttggataccatttcattttcttttttacttcttcaagacttgtttgttgtaagtgttttgggtacatatatatgcatatatatatatatatatatatatatatatatatatatatacaagcttatcatcatattgtgtgtccacgtttttttctctgtattagaggggaaagggggtaagaaggattgaggcagtggatggttttttaaaaagtaaagaaaaagagtgagaagaacatgattgagtggagagaagggacttgttatcctaaggctttaatgggagtgaatgtgggtcttgcttctgtcgatgccgttattgcagttcttgcttttgctcagttaatgagaattcactctcggaatacacacaatggctggactcgtcagaaagtatttcacttgatgattggatcttcaaatttgggttatttcctttattttattttgacaattgttgccgcatgtaagggttggattttctggtcgcactcctgtggctttgtcgttatggctttccccaaaattcttttccttgcggcatttcttcttctcctttctttctgggttgatctttgtcatcagtcaaatgatgaagaagatgaagatgatgtatatagccctcgagaagctttgttggagaagaacaagccaaattcaaatgctgatagtcgccgaagatgctgctcttttcgtgctgtcaaagtgggaagccgccaaaaagttgtggttctggttaccctgttagtttttctgttaatgttggtagctgctgtactaatatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="72074" stop="60996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71774" g_stop="71354" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71353" i_stop="67300" i_length="4054">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67299" g_stop="67249" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="468" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67248" i_stop="65176" i_length="2073">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65175" g_stop="65142" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="502" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65141" i_stop="63510" i_length="1632">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.541" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63509" g_stop="63423" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="589" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="63422" i_stop="63352" i_length="71">
            <donor d_prob="0.873" d_score="0.98"/>
            <acceptor a_prob="0.568" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63351" g_stop="63300" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="641" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="63299" i_stop="62103" i_length="1197">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62102" g_stop="61934" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="810" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="61933" i_stop="61348" i_length="586">
            <donor d_prob="0.812" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="61347" g_stop="61296" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="811" r_stop="862" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U584094" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584094" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71774" e_stop="71354"/>
          <exon e_start="67299" e_stop="67249"/>
          <exon e_start="65175" e_stop="65142"/>
          <exon e_start="63509" e_stop="63423"/>
          <exon e_start="63351" e_stop="63300"/>
          <exon e_start="62102" e_stop="61934"/>
          <exon e_start="61347" e_stop="61296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAATTCAAAGAAAAAGATACCATCGAGGCTGCATAAAGAGAAAAAAAAGTAAGGGGAATTAGGAGAGTATCGTTTTGGATACCATTTCATTTTCTTTTTTACTTACTTCAAGACTTGTTTGTTGTAAGTGTTTTGGGTACATATATATACATATATACATATATATATATATATATATATATATATATATATATATAAGCTTATCATCATATTGTGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAA-GGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAGGTACTCTTCTCTCCCCCCTGTTCTTCATTGTTTCAGAGGGTGTTGTTATATATGTGGAGTTTCTGCTAAAAATTCTGTATTGATTATTGGAATTTTTTGTGTTGGGTGTTCGTTTCTTGTTCCCAATTTGGGATTTTGGGAATGCATTCCAATTGGGATTTTTGAAGGGTTTTAATGGATTCTGAATGATAATCTTGTTTGTGATGGGCAATGGAAAGGTGCTGTTTCGGCTAGGTTTGTGATATTGATTGAAAAATTGAGTCCTTTTGCTAAATTTTCTTCCTGTGGCTTATTAGTTTCTGGTTTCTGTGTTGTCAATTCCGTTAATATGCTTGAATTCGAAGGAATGTAAGTTCATTTGTCACAATGGGGTTAAGTTTTTTGCTTTCTAATTTATCATGGGTTTATACAGACGCATTTTCTTGAGACAGTTTTCTGCCATTGTCATGCATAGTTTAATATAATAAGTAGTGTATCTCTTTGACAAGTTCTGCTGAATTTAGTAATTTAAAGTTGCAAAGATTCGATTCGAAGAGACCAAATGTAATCTTGTTCTGAATATGGATTTTCTGAAGCAGAAAGCTTATTTTTCACGGGGACTTTGCCATAGATCACTTGCATAGCGATTTTTACTATGATTTCTCTTCCTCTTCTCTGGGAGGAGTAGGATGCAGTTTTTCTGGGCCAAATTGTGATATGTTTTGTCATATAGGGCTTGCAGCAACATTTAGGGAGTTATCGAGAAGTGATTTTCACTGTTTTGAGGGACTTTACCAGTATTATGGCATTTATGGCCAATATGATTACCCATGGAGATTGCATTAAGTATATGATTATTATCTCCACATTCAATAGATTTTGCTGCATTTGGTGAAAATGGTTAGTTTCATTGTTACAATACCATCTAAGATACTAGCTAAATGTGGAACTTTTGAATCATTGGTATTCGTATACCCGCTCTGCATTTGTGTAGGTGAACATGATTTTTGATGTCCTTGAGAATGGGCTAAAATTGGGATTGTTCTTGAAGCAGACTACTGGGATTCAACCATGTGTTGTTTTTCTGTTAATGCTTATCAAATACCATATTAGTCCTACGCTTGCATATTATTTGATTAAAAATGGAATAAAAAACAATTTTATCTGAAATTATATTGTTAAATGATTCTCGGAGAATCAAGAAGATTGTGGGTACTAATTTTATTCATGACAAAGAGATCTTATATGTTTGAGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGCCAGCGAAAGCAAGGGGTATGCCTTCTGGGTCGAGATCGCCTGGTGCGGGTTACCTCTCCTATGTGGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTGTGCGCACCCAAAAGGGTAGTAGCTGCGGGTTTCCCTTGTAGTAAAAAAAAAAAAAGAAGAGAGATCTTATATTTCAATTTTGGACCAGAGATGATACGTGTAAAACTCTTCTTTCTCATTGAGAGTGCAAGATATCATTCCAAAGAATAGTTTGAAAGCTATTCAGAAAGTAGCCAATTTTTTAGAGCTAATGGCTCTTGTTTAAGGCAGGAGAGTACCTTGCTTTTCCTTTTGAGATATCCGGTACTCTAACAGAATTTTGTGATCCTTTTGTTCACTATCCAAATGCAGTTAAAGCAAAAACTTGGTACGTTGGGATAACCTTTAATTGAAAGCTAATATGGTGTAAGCATAACTCAGGGTATGGATCTTTTTTTCCCATCCATGTTGTTGTCAATGCTTCCTGAACTGCAAACCGAATCTCCAAATATCTTCCTTACTCCTCCTCCTTTAGGCATGACCTCTTTGAAGGTTTTTTTTTTCTTTTGATGAAGTAATTAGTTCTATTGCAGGCATCAAGTAGATGCATAATAGTTAGAAAAGCTTAGTAGCAAAAGGTCAGCTCTCCTTTACATTGTTAATTGAGAATCAGGGAGCGGACATGGTTCAGAAATCAGGGCAATCTAGAGGGGATAAATAAACCCAACTATACAAAAACATGAGGCAGTTAGCTTTTAAAGATTGGTAGGTAGTTGATTCCATCAAAGCATCTTCTATTCCTTTCGTTCCAGATACTCCAAAAAATGGCTGCAGGTATCTTTGAAGGTTAACTGACGTACCCCACTTCATATCCCAAGATCATGGTGGATGATGGTTAACTGCAGTGAGGAAGCATTCCCTTTTTCTAATTATTTTTTAAAAAGTCTACTTCTTAAGAAGAAAAAGACATTGCAGACCTGTATCAAAATATTTCATCACTGCTTGGTGCAGCTTTCTGCGACTTAGGTTGCAACTTTCTCCAGTTCTTCTTCTTCAAGCTCCAGCTATGCTGTGTTGCTGCTTCTTCTTCTTCTTCTTCTTATTATTATTATTATTATTACCATGCTGCTATGTTTTTTTTGCTGCTGCTTTCTTTTTTTCTCTTCTCTTGTTTCGGTCTTCTTCAGCTTTTATATTCTTTATTTGTTTCTCTTTTTTTTCTTCTTCAGTATGTTAATTTATTTGGATTTTGTTTATTTGTTGTCTTCTTCTTTTTTTTTCTTTCATGTGTTGCGTGTACTTCTTGTGTCTAATTTTAATTATTTTATTTCCATTTTCTTCTCATATTCATTTTATTCTCTTCTTTTTCAGTAGCTTTTTTTGAATTACAGTTGTTTTTTAATTTTTTGTTCTCTTAACAGCAATTTCAAATGGTATCATCTGAGCAAAATAGAGCCATCAATTTTTTCAATGGCATCATCCATTTATGTTTTGTTTTTTATTTTGCTTGTTCTATCAAGCATTTCTGGCTATCAACTTTCTAGTTTTAAAATTGAAAGATTTGCTTCTATATATTATTTCTGTTGATGTCTTTTTTGATTTAGTTATTTTACTCATATGTGCGAGGTTTATTTTATTTTTGAAATGGTGCTTCACTTCAATGAAGAGAGTGAAGGGAGCTTTTGTTGCTTTTTTGCGCTTCATGCTCTCAAAAACACTGCCTCCCAGCAAACTACTCTATAATTAGTCCAAGGGGAGGGCTAGATTGGTTTTCTTCTACAAGTATAAGTGTCTTCTCCTCATGTATCTTGATTGGTTCAAGATGGAAATCGTTAAGAGTCCCTTGATTATTTGTCCCACTTGAATAAAGAAATTGTTTCTTCGGCTTGGTAACTCTTAAAGGAGGTGTTTGACACATCCCTCGGCAGAAGATGTTACATATGCCTTGTTTTTGCATTGCTCAGTTGCAGCCGATATATGGAAGTATATTCCTGTCCTTTTGTCATTCAATGAGTTATGCCTCATGGTCATAGCATAAAAGCACATACATAAGTGGGGACAATAGAATGTAAGGGAACAATTAAAAAGTTTTGACAGACTGTTCCAGCTTTTATTTTATTTTTTGGTGCCTATGGCTGGAAAGAAATAGCAGAATATGCTTCTCAAGGAGCCTCTTCTCCTATTCATGCTTTGAAGTATGGATGTCTTGGGAACATTTTTTTCTGGAGTAACCATTATATTCTGAATAATTTTGACCAGCTTTTACACTTTGTTAGCTCCTTAGGCGGCATAAAGGAGGATCACTGTTTAATTTAGGTGCTTGCTTAATATGACTAGTTGCTAAGATTGAAAACCAGAGAGGCAGGGGGTGGGGGTTGTGGGAGAGTTTGATGTTGTCAATGAGTTATCAGCATTCAACTACAATCTAGGACCATTGTGAAGATGAGGAATGAATCGAGCAGAGTACTTTTTGACACCAACTGGGTGACTAACTGAAAAAGAGGAAACCTTAATCTAGCTCAATTCTAACCTTGGGATACTGAAGCAATCGAATGGCTGCAAACCAGTTTGGTGCTTCTGTTTAGGTTGCTGCTCGTGCCTTCCGTGGTTGCATAATATTGGTGCAACTCTATTAGAGTATATTCTTGTGCTGTTAATGACACTCACATTTCCAGTGTGGTAGTGATAATTTCTGGTTAAATAGATTGTGCCATCATATTTTTGTGCAACTAAACTTGCTTATCTATTTTTCCAGTTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAAGTAAGTATTTCATCCTCGATTCTCTTGCTGATTTTATTGGTATCTGAGCTGGATGAAAACATTCTGTCCCTCCTACTTTAAATTAAAGTACTTTCCCAAGGTTTAAGTAATTATTGAACAATGTGAAAGCAGGCCAATTTGCTGCCGACACTTTTTGCCTAGTTCCAATTATGAATAGCAAATATACTAATGAAGCATGTTGCTAGATGCTTATATGCGACCGACTTTCCCTTTGATACCGAAAGTTACTGTGATTTGGGTGTTGTTAATTCTCTTTGGGAATTGCACCGAGGGTGTGGCCTAACTGTCAATGAAGATGAAAACCATGGAACATAGAAGAGACAAAGACTCCTAAGTGAGTTCTTCCCATTTGCCTAAGCCTCAGAGGGTAAAGTTACCCTGTATTTGTGTTGGTGTGCGGTAGTCGAAGTGCTCGCAAACTGGTCTAAACACCACAATTACAATAATAGTAGTTTTCTTCGGCAACTAAGACTTAGGTATGCATGTTCATGTGTGTAATCATTTGTATCTTTACATTAACCATAAGTGACAAGGATAAAATCGTGGAGGAGGTGTGCGTATAGGGAGTATAGTTTGAGTAAATGACTGGTTATGTGAGCTCTATTACTGTTGGTACTTGGTATTATTTTATTTTATTTTTGCATACTTATTAGGAACACTTCCCTCATCTGTTTTCCTTCCAGCCAAGCTCCTCACTTATGTTGCCGGTTTACCTATTAAGAGTGTAGAAGAGAGGAGAATGTGAAAAGTCCCAGAACCCATGTTGATGATATTCAACTAAATACTCTTGTCTAAACCATTAGTATTATAATGTTCAAAACGCGTGCCTAGCATTTACGGTTCAGGTGACTTATCATCTCTTTTTAATAATATTAGATAATTCAGGTGACATAACAGTGGTCTTCAGAAGCGAAAATATACTTCAGATTCCTTTACAGTTGTGGTATTAAGTTGCTTCTTTCTCACTATTGCCATAGTAATGAGTAACGATCCTTATCCTCCGTTTCTACAACTTGATAACTATTACCTAAAATTTTCTTTTTTGATAACCATTGCCTAAATTACTGTTCATCATGTAGGTTTTCAAAATTTTAGTATTCATACCAGGTTAGTCTCCAATTTTTTCCATGTGATCTAGTTGTACTCTCTTAATGTATCTCTCTTCCCCTCTCAGTCCTCTGATGAGTACAAATCCAAACTTCAGGATATTAAACCCAGCCTAATTACTTGGCCATTATGGTATTAGTGGTTCATTTATGCTCACATCTAAATTCTTTGGTGTTAGAGATGAGGGGTGTCTATGCTCAGTTCTTGGTGCAAGATCAGTCTATTGATGATTGACCATGGAGGTTTTACGAGTGTGATAATGGTGATATTGAGCTCTGTAACAGTCAGGGTCATAGTAGTGATCGTCTTGTGGAGTTAACCGGTAAATGCTGGCCACTGCTACGTTCTACCATGTTAACTTCCAGCCAAGTGGTACAATGTGTAGTGCAGATTGGGTTGAATATTCTGGTGATGTTACTTCTTCAAAAGAACACAAATGCATCTTTGAATAGCTGAAATTAGTGAATATCGAGGAGTCTTGTTCTGCATGAAATGATCCAAGTATGGTGCAACAAGACGCTTCTTCCACTCATTTGAAGGCACTACCAAAAAACGAGAGTCAGTTTACCTCCTTGTTCTTCTAATACCTGACTGTGAAGTGGCGCATGCTTGATATACCAATTGGAAACGAAACTGGGCTAAACTTGATAATATCTACATAGACTAGCTCCGTGTAATAACAAATAAAAGACTTCATCAACTCTGAGGTAGCACTACATCTCTTGGAGGATATACACATATATTAGAATTTGGAAATATATTGCCTTAATTAGTTTAGTTTACTGCTATGAAGCGACAGTCATCAAGATTTTTCAATGATTCTTCTTCCTTTTGTCCTGGTTAGCCTTAAAAAAAATTCTTTAGTAGATTCAATGAGGCTTCCTTCTTGTTCACTTATGTGCTAATTACAAATCATGCTTACTGGACTTCGCTATGAAATTGCAGGTATTTCACTTGATGATTGGATCTTCAAATTTGGGTAAGCATCTTATTTTCTCTGTTGTATCATCATTCTATCTATGGATTATTTTTCCCTGAGATCTCCCCGGGAGCTCTTATCAAAAGAAAATATTTGCACTCTTACTCATAATATTGAGTTTCTTAAGCCAATTGTTGATGCATATTTTGTTTTGAATGCACATGGGAGAGATTAAATAATGTGAAGCACAAAATGATAAGCAATTTTAAGAGTTAATGCAATGATATGACTTAGATTAATTTGGAAAATATGAAGTTGGGCAAGATTAAGTAATATGTCGCTTTTCTTTATCATTTATGGGAATACAAGCTTCCTGCAAACCTTTCATCCATATGGGGTAACTGAGTTTTTTTTGAGAAAGGTAAAGTTAATTCTATATATCCACATGTATACTACATCAAAGCGTAGTCACAAGGAACAAATATCAAGAATATTTGCTAGTTCTCTATGTACAGAACTCATGGGGTAACGGAGTTTTGTACATAGAGAACTAGCAAATATTCTTGATATTTGTTCCTTGTGTAGCTTCTCACTAACATTTGACTCAATGGTGGAAGTGTTGAAAAGCAACATGTTATGCTTTAATTAAACGTAATTAAAATGTGGGTTCTTCTGAAAAATGTGCTGATACGAAGTAAGAAGGATTTTAATCTAGTGCAATCTATAAAAATAGAAGAAAGAAATATGTATCCAGCACCAGAAAACATAATTATGAACAAAAACAACTAACTCAGACAAATGAGTTGGTAGATACACAACTAGATGAGATATTTAGAGGTAAGACGATGTAAATTAAGTTCAAAGATCATGCCAGTTTTCTAATTTAGATGCAAATTTGCTGCTTTAAGTTTCTGCTGCACTGCATTCTAACTTCTATTCCTAATAGTAACAATTCATTTGTTTTGTTCTTTGTAACAAAGTAAGATATTAACATGCAGGCTGCGTTTCAGCCCAGTATTAAAATGAGTTGAACAAAGCGGGTCAAAATGAGCCCGCTTAATAAAATAAGTGGGTTATTAATCTGTCCGAATCTAAACAGGCTGGGTGGGTTATGATTTTGGGCTGATTTTATAGTATCTTGTTTTCAAAGTAAACAAGCTCAGTTATTTACCTCATTGAGTTTGAGATGACGTGTTAAAGTATCATTACTATTATTATCATATTCTTCAATTAGATCACTGGTGTTGTTTCTTTTACTTGGGTTATCTTCACTATTTTTGTTTTCAGTACTACTCTTTTCTACAATATTTTTACAATAGCTTTTACTCTTGTATATGCCAAACCTGTTTTCGAAAATGTTTTTCTTGATCCGAGGGTCTATCAGGAACCTCTCTACAAGGTTGGGGTAAGGTCTGTGTACACCCCAACCTTCCCAGACCCCACTAGGTATGTCATTGTAGAAGATCTAGCTTCTCGTTTGGTAGAAATTAAGGGCACAAAGTGTATAAGCTAATTTGGACATGGAACTTTGATAAACCACCTGTGCTCGTGTATACAATTATCTTTAATACCTTACCTTTATCTTTTATTTTTTGCTTTCTATGCATTTCATAATGATAAAGTAAGTTACTGTCCAGCAAGTGATCTGTTTGAATTTAGTTGCATTTCATAATGAATTTAATTCTCCTGCAGGTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAATGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGGGTATGTGCAAACCCGCCGTTCTTTTTCAACTGAGGCTATTTTAACTAAGACTTATGAAAACTATTTTGCAGCTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTGGTAAGTTCGCCTTCTGTTTTCTATATCCTTTAACGAGTGAAAATTATTGTTGTGAATTTAACGATTTACCTTCTTTTTATAATTCTAATTTTGAGGAAAAGAAACTAATTTATGAGGGAAATTCAGTATCATGATCTTCCTATTTTTTCTCAGTCATCTTCATTCCAGAAAATAATCTTGGGGCAGAGAAGCAGTACCTGTTGCTTTAATCAGTAAGCTGACAAAACCAGCAGTTTGCGAGACACCAAATAATGATCCTCTTTTGGTGAATAGCAGTTACTTGCTAAAGTTGCGTGACTTCACTTTCAATGCCACACCCGTGTCGGATTCTCCAAAAATCCACTACTTTTGGAGAATCCGACATGCACCCATTGTCATTTATGAAGAGTCTGAGCAACATAGGTTACTTGAGCCTAGTGCTGTTTGTAGATTATAGATACTTCTGCTCTACACCAACAAAGTTGTCACTTGTCATGTATCTCTTTTTTTTAATATCCGATCAGTGGTGCAACATTCAGTGCTTGGTTGATAATGGGCACACTCCTTTATACTTTCTCCACTTAAACAACAACAACAACAAACCCTGTGTGATCCCACAAGTGGGGTCTGGGAAGGGTGGGGTATACCGTATACGCAGACCTTACCTTACCTTTATGGTGGGGTAAAGTTGTTTTCGATAGACTCTCGGCTCAAAAATGGGAAAGAGTGTTTTACAAAACAGGTTTGAAAAATACAAGAGTAGGAGAACTATGATGCAACTATCAAAGAAAAGAAAAATATCGACAACAAAATAGAAAAGATAAGCAAAGTAAAAGAAATAACAGTAGTTCTAAATCTTAAAGAAAAAGGTAACGATACAACAAGAATTATAGTACTGATAAGTATAAGAAGGAGAAAATAATGAACTTCTCCACTTACATACCAGTTCTTTATTTGCAGTGGAATATATACCCGTGACATGCGCCTGACCCACATATCATGACATCACACACTATGTTCTCACCTTTAGACCAAAACCTTGGTGGCCAAAGTTGTCGTGCGTCTTATATCCTTTTGCACTTGAATCTACAAAAATATTACTATACAAGAACCTCTGAAATAAAAGAAAATGTGCAGGGGTCCAAGCCATGAACTCTATCTTCATGTAGAAATTAAATATTGATGAAGTCTAAAATCCTTTTCTGTAAATGAATTTAGGGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTGGTAAAGTTTATGGAATATGCGCATATAATGTTTAAAAGGCAAAATTGTGATTCACTTAGCAGCTCAGTTCACAGGCTTTAAATGCAACTGGCCAACCATGTGGCGAAAAGTCTCTTGAGATAACAACCAAATAAGTGGGGCTAGTCCCACATTTATGCTTTGTGTTATCTGCCTTTTGTGACTCCAAATATCTTTTCTTAGTATTCGAGTATAAATTCATGTTACTGCTAACTTATAAACGATGTGTTTTTGTTCTATAATTTAGTATGTGGTGAAACTATATTAAAATAAACACATCTTATTATCACTTGGGTACTTAATTATTTCTGTTTATCTTGTGCTTATGAATTATATCACATTTTAGTGGGCTTTTTTTGAAAAAAATATTTTTTTCTAAAATTCTTTCAAAATTTTTGTGCGGCATATGTCTGCGTTGTGGCAAAATCCCTACTCTACAAACCCCCTGCTGTGCCCCCACTTTTAAGACATTGTGTGTATGTTCTACATAAAAAATGACACATTGTAACTCACTGTGTTTCTCTTTTTCCAATTTGGTTCTTAATTCATGTATTTGCTTTTTGACCAGGTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGA</genome_strand>
        <mrna_strand>GCAAATTCAAAGAAAAAGATACCATCGAGGCTGCATAAAGAGAAAAAAAAGTAAGGGGAATTAGGAGAATATCGTTTTGGATACCATTTCATTTTCTTTTTTACTT-CTTCAAGACTTGTTTGTTGTAAGTGTTTTGGGTACATATATATGC--ATAT--ATATATATATATATATATATATATATATATATATATACAAGCTTATCATCATATTGTGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGGGTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAAGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTCACTTGATGATTGGATCTTCAAATTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAAGGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGG.......................................................................CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569563" ref_strand="+" ref_description="SGN-U569563 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>gtttctagtcatgtgcatcatgatcttggctagggaatatgtagaaaatgcatgttctttcataagggctattcactgatcaaatgaaatgggaaaaagttgaagacaaagaaaacaaattatttatctcctcgcacattacactagggacgggaaatcatggtaggtgaagctatgtgtgtgagaatcattttagctgtccattaaatttttcgtaagatccacaaactcgccagaattgcagcttagcagttgaaagacaacttatacaaacattgttttttacctttcaccgaacatcaaaacccaaaagagaatatggaaggaagtgcagaatcaatgaagaactcaactttctgcactggaggtctttccactcatttattgattttcattatattacattctttggatttacaaacttgtaccaatgtgttctgagcattgtggatgcaggtctcaagggcgagccccatatgatcatctgatggaattgtacattgatcggtgattttcagctagaaacgagggattgacaatactaaaaatgagacgacttctcagttgagtggttggtgttgtggttgagtgatcgaagaaagctcaactcaacgggaaaataataccccatgtatctaagcaaggtaggttgctcagggtatacatgcctgcataacttggatttctgtatatatcaaacattgcaatgaactttccaaattttacagattcttttttgttgatataatgaggttttagatttttcttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="83304" stop="81935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83004" g_stop="82235" g_length="770"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="770" r_length="770" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U569563" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83004" e_stop="82235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTAGTCATGTGCATCATGATCTTGGCTAGGGAATATGTAGAAAATGCATGTTCTTTCATAAGGGCTATTCACTGATCAAATGAAATGGGAAAAAGTTGAAGACAAAGAACACAAATTATTTATCTCCTCGCACATTACACTAGGGACGGGAAATCATGGTAGGTGAAGCTATGTGTGTGAGAATCATTTTAGCTGTCCATTAAATTTTTCGTAAGATCCACAAACTCGCCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAACATTGTTTTTTACCTTTCACCGAACATCAAAACCCAAAAGAGAATATGGAAGGAAGTGCAGAATCAATGAAGAACTCAACTTTCTGCACTGGAGGTCTTTCCACTCATTTATTGATTTTCATTATATTACATTCGTTGGATTTACAAACTTGTACCAATGTGTTCTGAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCATCTGATGGAATTGTACATTGATTGGTGATTTTCAGCTAGAAACGAGGGATTGACAATACTAAAAATGAGACAACTTCTCAGTTGAGTGGTTGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGGAAAATAATACCCCATGTATCTAAGCAAGGTGGGTTGCTCAGGGTATACATGCCTGCATAACTTGGATTTCTGTATATATCAAACATTGCAATGAACTTTCCAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAGATTTTTCTTGC</genome_strand>
        <mrna_strand>GTTTCTAGTCATGTGCATCATGATCTTGGCTAGGGAATATGTAGAAAATGCATGTTCTTTCATAAGGGCTATTCACTGATCAAATGAAATGGGAAAAAGTTGAAGACAAAGAAAACAAATTATTTATCTCCTCGCACATTACACTAGGGACGGGAAATCATGGTAGGTGAAGCTATGTGTGTGAGAATCATTTTAGCTGTCCATTAAATTTTTCGTAAGATCCACAAACTCGCCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAACATTGTTTTTTACCTTTCACCGAACATCAAAACCCAAAAGAGAATATGGAAGGAAGTGCAGAATCAATGAAGAACTCAACTTTCTGCACTGGAGGTCTTTCCACTCATTTATTGATTTTCATTATATTACATTCTTTGGATTTACAAACTTGTACCAATGTGTTCTGAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCATCTGATGGAATTGTACATTGATCGGTGATTTTCAGCTAGAAACGAGGGATTGACAATACTAAAAATGAGACGACTTCTCAGTTGAGTGGTTGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGGAAAATAATACCCCATGTATCTAAGCAAGGTAGGTTGCTCAGGGTATACATGCCTGCATAACTTGGATTTCTGTATATATCAAACATTGCAATGAACTTTCCAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAGATTTTTCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584093" ref_strand="+" ref_description="SGN-U584093 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157359024|emb|CAO66926.1| (e_value=3e-19) unnamed; ">
      <seq>gctaattttggacatggaactttgataaaccacctgtgcacgtgtatacagttatttaaataccttacctttatcttcttttattttttactttctgtgcatttcataaggatcttactgtccggcaagtaatagtatgaatcggtcattaactttattctcctgcaggttatttcctttattttttgttgacagttgttgctgcatgtaagggttggattttctggcgcactcctgtggctttgttgtaatgggtagctttcaccagaattcttttccttgctgcatttcttcttctcctttctttctggttaccctgttagtttttctgttaatgttggtagctgctgtactaatatggattgggaggggaaggaaccctattgattcatctgttctggctcgggactggtattgttcttgaaaatgagcaaagtgagatctgaaagggcatcatcagaaatgtggaaggttgcaggcttggcagttgtttctgttctatgtttcactttaagtgagctgtcgccttattcacagatataccccttcttttcaactggcgtggacaggagataaatggtgtttgtacatctcttctcattgtttgtacatctcttctcatggttttatattattttataggtaccctttaaaacttgtgttccttactgaaagcttgatttgaaattctagacttcagtgggaacttctgctttctgcctgctaattggtgttaccaattgttgaagctacgagattctcctcaagcccaaccccttatacctaggagctactaactgtagttaattagatgaaaaaggctgaacatggtggaaggaaccaatttaataatcagaggttgctctgatgatgttattaagtgcattaatatcgtaaacattttgaggagttgcgagatgtctctctggatcctctttacagaagttgggagctatcgagtaaggacttaacataagagctggattgggacatattagatatttctttagaattcggggcatgactgagaggggactccagttaatttgttcaaccaagaatgcaagtagcgtgtacgtgttttgttggggggagctgatcttacaatgcagttctttcctacaaattagaattttattcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0091J18-Lgqd8/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0091J18.1" temp_strand="-" temp_description="C02HBa0091J18.1  AC215381.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0091J18 sequenced_by:kribb upload_account_name:korea">
        <position start="87723" stop="82969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87423" g_stop="87166" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87165" i_stop="87092" i_length="74">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87091" g_stop="87040" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="310" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87039" i_stop="85665" i_length="1375">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.382" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85664" g_stop="85569" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="406" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85568" i_stop="84334" i_length="1235">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84333" g_stop="84269" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="471" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84268" i_stop="83998" i_length="271">
            <donor d_prob="0.971" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="83997" g_stop="83864" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="603" r_length="132" r_score="0.761"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="83863" i_stop="83809" i_length="55">
            <donor d_prob="0.000" d_score="0.44"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="83808" g_stop="83269" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="1142" r_length="539" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0091J18.1" gen_strand="-" ref_id="SGN-U584093" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>1145</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0091J18.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87423" e_stop="87166"/>
          <exon e_start="87091" e_stop="87040"/>
          <exon e_start="85664" e_stop="85569"/>
          <exon e_start="84333" e_stop="84269"/>
          <exon e_start="83997" e_stop="83864"/>
          <exon e_start="83808" e_stop="83269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAATTTTGGACATGGAACTTTGATAAACCACCTGTGCACGTGTATACAGTTATTTAAATACCTTACCTTTATCTTCTTTTATTTTTTACTTTCTGTGCATTTCATAAGGATCTTACTGTCCGGCAAGTAATAGTATGAATCGGTCATTAACTTTATTCTCCTGCAGGTTATTTCCTTTATTTTTTGTTGACAGTTGTTGCTGCATGTAAGGGTTGGATTTTCTGGCGCACTCCTGTGGCTTTGTTGTAATGGGTAGGTATGTGCAAACCCACCCTGTTCTTTTTCAACTGAGGCTATTTTAACTAGGACTAATGAAGAACTATTTTGCAGCTTTCACCAGAATTCTTTTCCTTGCTGCATTTCTTCTTCTCCTTTCTTTCTGGTAAGTTCGCCTTCTGTTTTCTGTATCCTTGAACGTGTGAAAGTTATTGCTCTGAATTTAACTATTTGCAAACTAATTAATGAGGGGAACTTTCAGTATGGTGAACTTCCCATTTTTTCTCCAGAGTCATCTTCATTCCAGAAAATAGCAGTACCTGTTAATTTAATCAGTAAGCTGCCAAAAATCAGCAGTTTGCAAGACACTGCTACTGAGCTTTAGAATGTGGTTGACCAAATAATGATCCTCTTTTGGTGAATAGCAGTTATTTGCTAAGTTGCGCAGACTCTTCACTTCCAATGCCCCACCCGTGTCGGATTTCCCAAAAATCCACTACTTTTGGAGAAACCGACATGTACCCGTTGTCATTTTTGAAGTGTCTTAGCAACATAAGTTATTTGATCCTAGTGCTATTCAAAGACTATAGATTCTTCTGCTCTACACCAAAAGTTGTCACTTGTCATGTATCTCTTTTCTTTTAATATCCGATCAGTAGTGCACCATTCAGTACACTCCTTTATACCTTTGTGGGGTAGAGAAGCTGTTTTTAATAGACTCTCGGCTAAAAAAATGGGAAAAACAGTTTTTACAGAACAGGTTTGAAAAATACAAGAGCAAAAAGATCTACAATGGAACTATCAAAGAAAAGAAAAATATTGACAACAAAATATAAAAGATAAGCGAAGTAAAAGAAACAACAGCAGAGCTAAATTTTAAAGAAAAAGGTAATGATACAACAAGAATTATAGTACTGATAAGTAGAAGAAGGAGAAAATAAGGAACTTCTCCACTTGAATACCAGTTATTTTATTTTCAGTGGAATATATACCCGTGACATGCGCTTAACCCACATATCACGACATCACACACTTTGTGCTAACCTATAAGAACAATGTGTTTTTGTTCTATAATTTAGTATGTGGTGATAAACTATATTAAAATAAACACATCTGATTATCACTTGTTATTAAATTATTTCTGTTTAACTTGTGCTTATGAATTATAGCAAATTTTAGAGTGTGTTTTTTTTATTAAAATATTGTTTTCTAAAATTCTTTCAAAAAATCTGTGCGGCATATGTCTGCTTTGTGGCAAAATCCCTATTCAATTTGTGAATGGCTTTCATGGTTTGTTTGTTGTAGAAGAACATCTACGTAATCCTCATTGTGTATAACTGTTTGAGCTATTATATTCTGTTCCTGCCTGTCAAATTCAATAAAATTGTTAAATGTAGGAGTATTAATTTGCGTACCTATTTGGACTGGTTGTTGTACATCTTGTATAATATTTTGTTGCAGATTTTTAGGCACACGGTAACTCACTGTATTTCTCTTTTTCCATTTCGGTTCTTTAGTCATGCACTTGCTTTTTTGACCAGGTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTCTGGCTCGGGTATGGACTAAGGCTCTTTGATTACCAATATCTATTTATTTGTTGTTCTTGCATATTCTGTAACCTATCTGATTTAGCAGTTGTTGGTACTTCGCATAGATTACTTTCAGCCTCACATATTCATTTTTAGCTGCAACCAGATTTTATAACACAATCTATTTGATTGTTGTTTTCACATATTCTTTCTTCAATCCATTTGATTTAGGAGTTGTTTGTTCTCTTTATAGATTACTTTGAGCCTCACATTCATTTTTAGCTGCAGTTAGATTTTAATGCACAAACAAGTATATACCTTCGACTTGGAGCCCTAACTGTTTCTTAGTATTTCCTGAGAGGAGCATCTCGTTGAAAGAGAGGGTGTGTTCCCCTGTGAGTAAGGGTAGTTCTTGTAAAATATTTTTCATGCTTAAATGAATACGTATGGTATTTTTAATTTGCTTACAATACTGGTTTTTGGTGTTTAAATTATTGTTGGGAAAATATAAATTTAGACTGTTTCATGGTGGTTTTTTTCTTTGCCACCTCTCCCCACCTTCCTCTTGATAATTGATGAAGTGCAGTTACATGATCCAGATTTATGTAGATCTTTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGTGGCATTTGCATGTTATGGTTAGTATGTTATACACTGGTATTTTTTATACCGCCTCCTCATCAATGTTCACACGTCACAGAGAATTGTTGTCCTGCCATTTTCAGTAATATAATCTTATCTATTGCTACTATGCACCATAAATCTTTACATGGGCACTTCAGTACTTGTGTAATAACTAACGTCTTTTGATCCACCATTTCTTCACAGAATCAGCTGATATAAAAGATTGAGTTATTTTATTTAACAAGGATAGACTTACAAATGTTCAAGAGTTCTCTCTCCCTCTATGTGTGTGTGTGTCCCCAGAGGTGGGTCAGGGGTGTGGAGAAGTGATTTCAAGGAATAGTTTAAACAATAAGATATTCATGGTTGATAGTTTTAGGCGGTGAAACTGCTGCCTCCCCAGAAAGACCAATATTTCATCAGTAATATCGCAGTCGAATGAATTGATTGTTCAACCAATTATCCATTTCTCGTCGAGCTGTGCAAAATTCTAAGTAACAGTTGTCGTAAAGAATTTGCTGTTTAAACTAGGTCTTTTGTGTTCTAATTATTTTATGTGAAGGTTTCCTATTTCAAAATCTATCTTTCTGACCATAATATCTCTGCTATGCAGGACTGGTATTGTTCTTGAAAATGAGCAAAGTGAGATCTGAAAGGGCTTCATCAGAAATGTGGAAGGTACTAACTCATCTTTCCTCGGTGCATCTCTAGCATTTTCTGTATGTCGATTGGAATTGTTATTTGCAGACTGCAGAAAACTTCTGTGGCATGTCATATCATGTCATACTGAGATCTTTTACAATTCTAGTCTTAAGAATTGAGCTTGAATAAAGTGCACTTTTCTTTCTCTTCTTTTCTTCCTTGTTAAAATTCAGCTCTCATGACACAGATTGTGATAGATTATTTTATTGTGAAGTTTGATTTTTTATTATATGTTTGTCCAATGAAGGTTGCAGGCTTGGCAGTTGTTTCTGTTCTATGTTTCACTTTAAGTGAGCTGTCGCCTTATTCACAGATATACCCGTATGTCTTCTGCTGGTCTCATGAGATGTCTTTTGTTTTGACTGCATAAGTTTCTAAGAGATTATGCTTTTAATGCAGCTTCTTTTCAACTGGCGTGGACAGAAGATAAATGGTGTTTGTACATCTCTTCTCATGGTTTTATATTATTTTATAGGTACCCTTTAAAACTTGTGTTCCTTACTGAAAGCTTGATTTTAAATTCTAGACTTCAGTGGGAACTTCTGCTTTCTGCCTGCTAATTGTTGTTACCAATTGTTGAAGCTATGAGATTCTCCTCAAGCCCAACCCCTTATACCTAGGAGCTACTAACTGTAGTTAATTAGATGAAAAAGGCTGAACATGGTGGAAGGAACCAATTTAATAATCAGAGGTTGCTCTGATGATGTTACATAAGTGCATTAATATCGTAAACATTTTGAGGAGTTGTGAGATGTCTCTCTGGATCCTTTTTACAGAAGTTGGGAGCTATAGAGTAAGGACTTAACATAAGAGCTAGATTGGGACATATTAGATATTTCTTTAGAATTCGGGGCATGACTGAGAGGGGACTCCAGTTAATTTGTTCAACCAAGAATGCAAGTAGCGTGTACGTGTTTTGTTGGGGGGAGCTGATCTTACAATGCAGTTCTTTCCTACAAATTAGAATTTTATTCAC</genome_strand>
        <mrna_strand>GCTAATTTTGGACATGGAACTTTGATAAACCACCTGTGCACGTGTATACAGTTATTTAAATACCTTACCTTTATCTTCTTTTATTTTTTACTTTCTGTGCATTTCATAAGGATCTTACTGTCCGGCAAGTAATAGTATGAATCGGTCATTAACTTTATTCTCCTGCAGGTTATTTCCTTTATTTTTTGTTGACAGTTGTTGCTGCATGTAAGGGTTGGATTTTCTGGCGCACTCCTGTGGCTTTGTTGTAATGGGTAG..........................................................................CTTTCACCAGAATTCTTTTCCTTGCTGCATTTCTTCTTCTCCTTTCTTTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTCTGGCTCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGTATTGTTCTTGAAAATGAGCAAAGTGAGATCTGAAAGGGCATCATCAGAAATGTGGAAG...............................................................................................................................................................................................................................................................................GTTGCAGGCTTGGCAGTTGTTTCTGTTCTATGTTTCACTTTAAGTGAGCTGTCGCCTTATTCACAGATATACCCCT-TCTTTTCAACTGGCGTGGACAGGAGATAAATGGTGTTTGTACAT-CTCTTCTCATTG.......................................................TTTGTACATCTCTTCTCATGGTTTTATATTATTTTATAGGTACCCTTTAAAACTTGTGTTCCTTACTGAAAGCTTGATTTGAAATTCTAGACTTCAGTGGGAACTTCTGCTTTCTGCCTGCTAATTGGTGTTACCAATTGTTGAAGCTACGAGATTCTCCTCAAGCCCAACCCCTTATACCTAGGAGCTACTAACTGTAGTTAATTAGATGAAAAAGGCTGAACATGGTGGAAGGAACCAATTTAATAATCAGAGGTTGCTCTGATGATGTTA-TTAAGTGCATTAATATCGTAAACATTTTGAGGAGTTGCGAGATGTCTCTCTGGATCCTCTTTACAGAAGTTGGGAGCTATCGAGTAAGGACTTAACATAAGAGCTGGATTGGGACATATTAGATATTTCTTTAGAATTCGGGGCATGACTGAGAGGGGACTCCAGTTAATTTGTTCAACCAAGAATGCAAGTAGCGTGTACGTGTTTTGTTGGGGGGAGCTGATCTTACAATGCAGTTCTTTCCTACAAATTAGAATTTTATTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>29</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4242" PGL_stop="3314"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4242" e_stop="3772"/>
            <exon e_start="3721" e_stop="3314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.996"/>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="4242" e_stop="3772" e_length="471"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="3771" i_stop="3722" i_length="50"/>
          </intron>
          <exon e_serial="2" e_score="0.956">
            <gDNA_exon_boundary e_start="3721" e_stop="3314" e_length="408"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4242" stop="3772"/>
              <exon start="3721" stop="3314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4241" stop="3832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592907" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAACTTCAAAAGTTTACCATCAAACACTTACTTTTCTCTTGATATAAACACAATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAATCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTATGGATGGGACACTGCTGGACTTTCAGCAGACCCTGAGACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGTAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTAAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGC : CATCTTGGCCATTTGGGCTTGCCAAGTTGTGTTGATGGGAGCTGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCAGGTGGAAGCTTCGACCCATTAGGCCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGGTAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACCGGAAAAGGTCCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGGCCTTCGCCACAAACTTTGTTCCCGGAAAGTGAATACCATAAAATGATTTTTAAATTTTCATGTAAAGTTGTTGTGAATGAGTTGACAATATAATGGATTTTTCTATTCC</gDNA_template>
            <first_frame> A  N  F  K  S  L  P  S  N  T  Y  F  S  L  D  I  N  T  M  A  A  A  T  M  A  L  S  S  P  S  F  A  G  Q  A  V  K  L  S  P  S  A  S  E  I  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S  S  P  W  Y  G  P  D  R  V  K  Y  L  G  P  F  S  G  E  S  P  S  Y  L  T  G  E  F  P  G  D  Y  G  W  D  T  A  G  L  S  A  D  P  E  T  F  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  V  W  F  K  A  G  S  Q  I  F  S  :  H  L  G  H  L  G  L  P  S  C  V  D  G  S  C  *  R  L  P  Y  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  K  L  R  P  I  R  P  C  *  R  P  R  G  I  C  *  A  Q  G  K  G  D  Q  E  R  *  T  C  Y  V  L  Y  V  W  I  L  C  S  S  H  C  Y  R  K  R  S  I  G  E  P  C  *  S  P  C  R  P  S  K  Q  Q  R  L  G  L  R  H  K  L  C  S  R  K  V  N  T  I  K  *  F  L  N  F  H  V  K  L  L  *  M  S  *  Q  Y  N  G  F  F  Y  S </first_frame>
            <second_frame>  Q  T  S  K  V  Y  H  Q  T  L  T  F  L  L  I  *  T  Q  W  Q  L  L  Q  W  L  F  L  P  L  L  L  L  D  R  R  *  N  S  H  P  L  P  Q  K  S  L  E  M  E  G  S  L  *  E  R  L  L  P  S  L  P  H  L  A  A  H  G  M  A  L  T  V  L  S  T  W  A  H  S  L  V  N  P  Q  A  T  *  P  V  N  S  L  V  T  M  D  G  T  L  L  D  F  Q  Q  T  L  R  P  L  P  R  T  V  N  S  R  *  S  T  V  D  G  L  C  L  V  L  L  D  V  S  F  L  S  S  W  P  A  T  V  *  S  L  V  R  L  C  G  S  R  P  D  P  R  S  S  A :   I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  I  P  *  N  D  F  *  I  F  M  *  S  C  C  E  *  V  D  N  I  M  D  F  S  I   </second_frame>
            <third_frame>   K  L  Q  K  F  T  I  K  H  L  L  F  S  *  Y  K  H  N  G  S  C  Y  N  G  S  F  F  P  F  F  C  W  T  G  G  E  T  L  T  L  C  L  R  N  L  W  K  W  K  D  H  Y  E  K  G  C  C  Q  V  C  P  I  *  Q  P  M  V  W  P  *  P  C  *  V  L  G  P  I  L  W  *  I  P  K  L  L  D  R  *  I  P  W  *  L  W  M  G  H  C  W  T  F  S  R  P  *  D  L  C  Q  E  P  *  T  R  G  D  P  L  *  M  G  Y  A  W  C  S  W  M  C  L  S  *  A  L  G  P  Q  R  C  K  V  W  *  G  C  V  V  Q  G  R  I  P  D  L  Q   : P  S  W  P  F  G  L  A  K  L  C  *  W  E  L  L  K  V  T  V  L  L  V  D  L  L  V  R  L  S  T  H  S  T  Q  V  E  A  S  T  H  *  A  L  L  K  T  Q  R  H  L  L  S  S  R  *  R  R  S  R  T  V  D  L  L  C  S  L  C  L  D  S  L  F  K  P  L  L  P  E  K  V  H  W  R  T  L  L  I  T  L  Q  T  Q  *  T  T  T  P  G  P  S  P  Q  T  L  F  P  E  S  E  Y  H  K  M  I  F  K  F  S  C  K  V  V  V  N  E  L  T  I  *  W  I  F  L  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4242" stop="3772"/>
                    <exon start="3721" stop="3674"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ANFKSLPSNTYFSLDINTMAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSHLGHLGLPSCVDGSC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="11429" PGL_stop="5737"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11429" e_stop="10396"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="11429" e_stop="10396" e_length="1034"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11429" stop="10396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580431" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACAGCCTTCAACAATATTTAATACCATAAAATACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTGCAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAAATTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGCGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTTCCTGAGCTCTTGGCCCGCAACGGTGTAAAGTTTGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAAGGTTACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCCGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCGATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCATTGGAAAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTCGCCACAAACTTTGTTCCCGGAAAATGAAAATCTTAAACATTCTTAAAATTTGATTGTTTGATGGCCTTGTAAAGTAGTTGTCAGTAATTACTTGACATTAGAATGGATTATTTTTTTTCAATATTCAAAATTTCCAATGATTGTGTAATCCTGAGTTACATTTTTCAAAGCCACGAATAAAAAATATTGCCACTTTTATACC</gDNA_template>
            <first_frame> H  S  L  Q  Q  Y  L  I  P  *  N  T  Q  H  F  S  L  N  I  N  H  G  S  C  C  N  G  S  F  F  P  F  I  C  W  T  G  S  Q  T  L  T  I  C  L  R  K  F  W  K  W  K  D  H  Y  E  K  G  C  R  Q  V  C  P  I  *  Q  P  M  V  W  P  *  P  C  *  V  L  G  T  I  L  W  *  V  P  K  L  L  D  W  R  I  P  W  *  L  R  L  G  Y  R  W  T  F  S  *  P  *  D  L  C  Q  E  P  *  T  *  G  D  P  L  Q  M  G  Y  A  W  C  S  W  M  C  L  S  *  A  L  G  P  Q  R  C  K  V  W  *  G  C  V  V  Q  G  R  I  P  D  L  Q  R  G  W  T  *  L  L  G  Q  P  K  L  G  P  C  T  K  H  L  G  H  L  G  L  S  S  C  V  D  G  S  R  *  R  L  P  H  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  Q  L  R  P  I  R  P  C  *  R  P  *  G  I  C  R  A  Q  G  K  G  D  *  E  R  Q  T  C  Y  V  L  D  V  W  I  L  R  S  S  H  C  Y  W  K  G  S  I  G  K  P  C  *  P  P  C  R  P  R  *  Q  Q  R  L  G  F  R  H  K  L  C  S  R  K  M  K  I  L  N  I  L  K  I  *  L  F  D  G  L  V  K  *  L  S  V  I  T  *  H  *  N  G  L  F  F  F  N  I  Q  N  F  Q  *  L  C  N  P  E  L  H  F  S  K  P  R  I  K  N  I  A  T  F  I   </first_frame>
            <second_frame>  T  A  F  N  N  I  *  Y  H  K  I  L  N  T  F  L  L  I  *  I  M  A  A  A  A  M  A  L  S  S  P  S  F  A  G  Q  A  V  K  L  S  P  S  A  S  E  N  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S  S  P  W  Y  G  P  D  R  V  K  Y  L  G  P  F  S  G  E  S  P  S  Y  L  T  G  E  F  P  G  D  Y  G  W  D  T  A  G  L  S  A  D  P  E  T  F  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  V  W  F  K  A  G  S  Q  I  F  S  E  G  G  L  D  Y  L  G  N  P  S  L  V  H  A  Q  S  I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  K  S  *  T  F  L  K  F  D  C  L  M  A  L  *  S  S  C  Q  *  L  L  D  I  R  M  D  Y  F  F  S  I  F  K  I  S  N  D  C  V  I  L  S  Y  I  F  Q  S  H  E  *  K  I  L  P  L  L  Y  </second_frame>
            <third_frame>   Q  P  S  T  I  F  N  T  I  K  Y  S  T  L  F  S  *  Y  K  S  W  Q  L  L  Q  W  L  F  L  P  L  H  L  L  D  R  Q  S  N  S  H  H  L  P  Q  K  I  L  E  M  E  G  S  L  *  E  R  L  S  P  S  L  P  H  L  A  A  H  G  M  A  L  T  V  L  S  T  W  D  H  S  L  V  S  P  Q  A  T  *  L  A  N  S  L  V  T  T  A  G  I  P  L  D  F  Q  L  T  L  R  P  L  P  R  T  V  N  L  R  *  S  T  A  D  G  L  C  L  V  L  L  D  V  S  F  L  S  S  W  P  A  T  V  *  S  L  V  R  L  C  G  S  R  P  D  P  R  S  S  A  R  V  D  L  T  T  W  A  T  Q  A  W  S  M  H  K  A  S  W  P  S  G  L  V  K  L  C  *  W  E  P  L  K  V  T  A  L  L  V  D  L  L  V  R  L  S  T  H  S  T  P  V  A  A  S  T  H  *  A  L  L  K  T  L  R  H  L  P  S  S  R  *  R  R  L  R  T  A  D  L  L  C  S  R  C  L  D  S  S  F  K  P  L  L  L  E  R  V  H  W  K  T  L  L  T  T  L  Q  T  P  L  T  T  T  L  G  L  S  P  Q  T  L  F  P  E  N  E  N  L  K  H  S  *  N  L  I  V  *  W  P  C  K  V  V  V  S  N  Y  L  T  L  E  W  I  I  F  F  Q  Y  S  K  F  P  M  I  V  *  S  *  V  T  F  F  K  A  T  N  K  K  Y  C  H  F  Y  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11371" stop="10571"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>798</number_coding_nucleotides>
                  <number_encoded_amino_acids>266</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="6194" e_stop="5737"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="6194" e_stop="5737" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6194" stop="5737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580356" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGGGCAACCCAAGCTTGGTCCATGCACAGAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTACTCATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTAGACCCACTCTACCCCGGTGGAAGCTTCGACCCATTAGGCCTTGCTGAAGACCCTGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGTAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAGGGACCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGTCCTACGCCACAAACTTTGTCCCCGGAAAATAAAAATCTTAAAACATTCTCAAGTTTCTGATCATTTGTTGACCATGTAAAGTTGTAATTTGTGAGTTAACTTGAACAATAGAATTGATTTTTCTTAC</gDNA_template>
            <first_frame> L  G  N  P  S  L  V  H  A  Q  S  I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  S  Y  A  T  N  F  V  P  G  K  *  K  S  *  N  I  L  K  F  L  I  I  C  *  P  C  K  V  V  I  C  E  L  T  *  T  I  E  L  I  F  L   </first_frame>
            <second_frame>  W  A  T  Q  A  W  S  M  H  R  A  S  W  P  S  G  L  A  K  L  Y  S  W  E  P  L  K  V  T  V  L  L  V  D  L  L  V  R  L  *  T  H  S  T  P  V  E  A  S  T  H  *  A  L  L  K  T  L  R  H  L  L  S  S  R  *  R  R  L  R  T  V  D  L  L  C  S  L  C  L  D  S  L  F  K  P  L  L  L  E  R  D  H  W  R  T  L  L  I  T  L  Q  T  Q  *  T  T  T  P  G  P  T  P  Q  T  L  S  P  E  N  K  N  L  K  T  F  S  S  F  *  S  F  V  D  H  V  K  L  *  F  V  S  *  L  E  Q  *  N  *  F  F  L  </second_frame>
            <third_frame>   G  Q  P  K  L  G  P  C  T  E  H  L  G  H  L  G  L  P  S  C  T  H  G  S  R  *  R  L  P  Y  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  K  L  R  P  I  R  P  C  *  R  P  *  G  I  C  *  A  Q  G  K  G  D  *  E  R  *  T  C  Y  V  L  Y  V  W  I  L  C  S  S  H  C  Y  W  K  G  T  I  G  E  P  C  *  S  P  C  R  P  S  K  Q  Q  R  L  V  L  R  H  K  L  C  P  R  K  I  K  I  L  K  H  S  Q  V  S  D  H  L  L  T  M  *  S  C  N  L  *  V  N  L  N  N  R  I  D  F  S  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6194" stop="5832"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="8757" e_stop="8620"/>
            <exon e_start="8451" e_stop="8091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.986"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="8757" e_stop="8620" e_length="138"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8619" i_stop="8452" i_length="168"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8451" e_stop="8091" e_length="361"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8757" stop="8620"/>
              <exon start="8451" stop="8091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593292" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGAT : CTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATATAATGGATTTTTCTTATATTCCAACTATGGTGTAGTATATAATTCCATTTTCCAATTGCATGAATGAAATACTGCAAGATTCATATC</gDNA_template>
            <first_frame> C  Q  E  P  *  T  *  G  D  P  L  Q  M  G  Y  A  W  C  S  W  M  C  L  P  *  A  I  G  P  *  W  C  Q  V  R  *  G  C  V  V  Q  G  W  I  P  D  :  L  R  P  I  R  P  C  *  R  P  G  G  I  C  *  A  *  G  *  G  D  Q  E  R  Q  T  C  Y  V  L  Y  V  W  V  L  C  S  G  H  C  Y  R  K  G  S  I  G  E  P  R  *  P  P  C  G  S  S  *  *  Q  C  L  G  L  C  H  K  L  C  S  W  K  M  N  I  I  N  *  W  P  C  K  V  V  I  V  S  L  L  D  N  I  M  D  F  S  Y  I  P  T  M  V  *  Y  I  I  P  F  S  N  C  M  N  E  I  L  Q  D  S  Y  </first_frame>
            <second_frame>  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  V  W  F  K  A  G  S  Q  I :   F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  I  S  *  I  D  G  L  V  K  L  *  L  *  V  Y  *  T  I  *  W  I  F  L  I  F  Q  L  W  C  S  I  *  F  H  F  P  I  A  *  M  K  Y  C  K  I  H  I </second_frame>
            <third_frame>   P  R  T  V  N  L  R  *  S  T  A  D  G  L  C  L  V  L  L  D  V  S  S  L  S  Y  W  P  V  M  V  S  S  S  V  R  L  C  G  S  R  L  D  P  R   : S  S  T  H  *  A  L  L  K  T  R  R  H  L  L  S  L  R  L  R  R  S  R  T  A  D  L  L  C  S  L  C  L  G  S  L  F  R  P  L  L  P  E  R  V  H  W  R  T  S  L  T  T  L  R  I  Q  L  I  T  M  P  G  P  L  P  Q  T  L  F  L  E  N  E  Y  H  K  L  M  A  L  *  S  C  N  C  E  F  T  R  Q  Y  N  G  F  F  L  Y  S  N  Y  G  V  V  Y  N  S  I  F  Q  L  H  E  *  N  T  A  R  F  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8756" stop="8620"/>
                    <exon start="8451" stop="8232"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="9074" e_stop="8646"/>
            <exon e_start="8534" e_stop="8177"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.998"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="9074" e_stop="8646" e_length="429"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8645" i_stop="8535" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="0.980">
            <gDNA_exon_boundary e_start="8534" e_stop="8177" e_length="358"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9074" stop="8646"/>
              <exon start="8534" stop="8177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590709" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTTGACATTTCAAACACTCATCACTTTTCTCTTGTTATAAACCATGGCAGCTTCTACAATGGCTCTTTCTTCCCCTTCTTTTGTTGGGCAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCGTCTAGCAGCCCATGGTATGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAAACTTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCT : GTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATAT</gDNA_template>
            <first_frame> T  L  T  F  Q  T  L  I  T  F  L  L  L  *  T  M  A  A  S  T  M  A  L  S  S  P  S  F  V  G  Q  A  V  K  L  S  P  S  A  S  E  I  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S  S  P  W  Y  G  P  D  R  V  K  Y  L  G  P  F  S  G  E  S  P  S  Y  L  T  G  E  F  P  G  D  Y  G  W  D  T  A  G  L  S  A  D  P  E  T  F  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  :  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  I  S  *  I  D  G  L  V  K  L  *  L  *  V  Y  *  T  I  </first_frame>
            <second_frame>  L  *  H  F  K  H  S  S  L  F  S  C  Y  K  P  W  Q  L  L  Q  W  L  F  L  P  L  L  L  L  G  R  Q  *  N  S  H  P  L  P  Q  K  S  L  E  M  E  G  S  L  *  E  R  L  L  P  S  L  P  R  L  A  A  H  G  M  D  Q  T  V  L  S  T  *  A  H  S  L  V  S  P  Q  A  T  *  P  V  N  S  L  V  T  T  A  G  I  P  L  D  F  Q  L  T  L  K  L  L  P  R  T  V  N  L  R  *  S  T  A  D  G  L  C  L  V  L  L  D  V  S  S  L  S  Y  W  P  V  M  V  S  S  S  V  R  L :   C  *  W  E  P  L  R  D  T  A  L  L  V  D  L  L  V  R  L  S  T  H  S  T  P  V  A  A  S  T  H  *  A  L  L  K  T  R  R  H  L  L  S  L  R  L  R  R  S  R  T  A  D  L  L  C  S  L  C  L  G  S  L  F  R  P  L  L  P  E  R  V  H  W  R  T  S  L  T  T  L  R  I  Q  L  I  T  M  P  G  P  L  P  Q  T  L  F  L  E  N  E  Y  H  K  L  M  A  L  *  S  C  N  C  E  F  T  R  Q  Y </second_frame>
            <third_frame>   F  D  I  S  N  T  H  H  F  S  L  V  I  N  H  G  S  F  Y  N  G  S  F  F  P  F  F  C  W  A  G  S  E  T  L  T  L  C  L  R  N  L  W  K  W  K  D  H  Y  E  K  G  C  C  Q  V  C  P  V  *  Q  P  M  V  W  T  R  P  C  *  V  L  R  P  I  L  W  *  V  P  K  L  L  D  R  *  I  P  W  *  L  R  L  G  Y  R  W  T  F  S  *  P  *  N  F  C  Q  E  P  *  T  *  G  D  P  L  Q  M  G  Y  A  W  C  S  W  M  C  L  P  *  A  I  G  P  *  W  C  Q  V  R  *  G   : C  V  D  G  S  R  *  G  I  P  H  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  Q  L  R  P  I  R  P  C  *  R  P  G  G  I  C  *  A  *  G  *  G  D  Q  E  R  Q  T  C  Y  V  L  Y  V  W  V  L  C  S  G  H  C  Y  R  K  G  S  I  G  E  P  R  *  P  P  C  G  S  S  *  *  Q  C  L  G  L  C  H  K  L  C  S  W  K  M  N  I  I  N  *  W  P  C  K  V  V  I  V  S  L  L  D  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9032" stop="8646"/>
                    <exon start="8534" stop="8232"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMAASTMALSSPSFVGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="9074" e_stop="8153"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="9074" e_stop="8153" e_length="922"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9074" stop="8153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577305" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTTGACATTTCAAACACTCATCACTTTTCTCTTGTTATAAACCATGGCAGCTTCTACAATGGCTCTTTCTTCCCCTTCTTTTGTTGGGCAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTTGCCAAGTCTGCCCCGTCTAGCAGCCCATGGTATGGACCAGACCGTGTTAAGTACTTAGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCTGACCCTGAAACTTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAATGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCTGGATCCCAGATCTTCAGCGAGGGTGGACTTGATTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGGTTCTTTGTTCAGGCCATTGTTACCGGAAAGGGTCCATTGGAGAACCTCGCTGACCACCTTGCGGATCCAGTTAATAACAATGCCTGGGCCTTTGCCACAAACTTTGTTCCTGGAAAATGAATATCATAAATTGATGGCCTTGTAAAGTTGTAATTGTGAGTTTACTAGACAATATAATGGATTTTTCTTATATTCCAAC</gDNA_template>
            <first_frame> T  L  T  F  Q  T  L  I  T  F  L  L  L  *  T  M  A  A  S  T  M  A  L  S  S  P  S  F  V  G  Q  A  V  K  L  S  P  S  A  S  E  I  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S  S  P  W  Y  G  P  D  R  V  K  Y  L  G  P  F  S  G  E  S  P  S  Y  L  T  G  E  F  P  G  D  Y  G  W  D  T  A  G  L  S  A  D  P  E  T  F  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  V  W  F  K  A  G  S  Q  I  F  S  E  G  G  L  D  Y  L  G  N  P  S  L  V  H  A  Q  S  I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  I  S  *  I  D  G  L  V  K  L  *  L  *  V  Y  *  T  I  *  W  I  F  L  I  F  Q  </first_frame>
            <second_frame>  L  *  H  F  K  H  S  S  L  F  S  C  Y  K  P  W  Q  L  L  Q  W  L  F  L  P  L  L  L  L  G  R  Q  *  N  S  H  P  L  P  Q  K  S  L  E  M  E  G  S  L  *  E  R  L  L  P  S  L  P  R  L  A  A  H  G  M  D  Q  T  V  L  S  T  *  A  H  S  L  V  S  P  Q  A  T  *  P  V  N  S  L  V  T  T  A  G  I  P  L  D  F  Q  L  T  L  K  L  L  P  R  T  V  N  L  R  *  S  T  A  D  G  L  C  L  V  L  L  D  V  S  S  L  S  Y  W  P  V  M  V  S  S  S  V  R  L  C  G  S  R  L  D  P  R  S  S  A  R  V  D  L  I  T  W  A  T  Q  A  W  S  M  H  K  A  S  W  P  S  G  L  V  K  L  C  *  W  E  P  L  R  D  T  A  L  L  V  D  L  L  V  R  L  S  T  H  S  T  P  V  A  A  S  T  H  *  A  L  L  K  T  R  R  H  L  L  S  L  R  L  R  R  S  R  T  A  D  L  L  C  S  L  C  L  G  S  L  F  R  P  L  L  P  E  R  V  H  W  R  T  S  L  T  T  L  R  I  Q  L  I  T  M  P  G  P  L  P  Q  T  L  F  L  E  N  E  Y  H  K  L  M  A  L  *  S  C  N  C  E  F  T  R  Q  Y  N  G  F  F  L  Y  S  N </second_frame>
            <third_frame>   F  D  I  S  N  T  H  H  F  S  L  V  I  N  H  G  S  F  Y  N  G  S  F  F  P  F  F  C  W  A  G  S  E  T  L  T  L  C  L  R  N  L  W  K  W  K  D  H  Y  E  K  G  C  C  Q  V  C  P  V  *  Q  P  M  V  W  T  R  P  C  *  V  L  R  P  I  L  W  *  V  P  K  L  L  D  R  *  I  P  W  *  L  R  L  G  Y  R  W  T  F  S  *  P  *  N  F  C  Q  E  P  *  T  *  G  D  P  L  Q  M  G  Y  A  W  C  S  W  M  C  L  P  *  A  I  G  P  *  W  C  Q  V  R  *  G  C  V  V  Q  G  W  I  P  D  L  Q  R  G  W  T  *  L  L  G  Q  P  K  L  G  P  C  T  K  H  L  G  H  L  G  L  S  S  C  V  D  G  S  R  *  G  I  P  H  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  Q  L  R  P  I  R  P  C  *  R  P  G  G  I  C  *  A  *  G  *  G  D  Q  E  R  Q  T  C  Y  V  L  Y  V  W  V  L  C  S  G  H  C  Y  R  K  G  S  I  G  E  P  R  *  P  P  C  G  S  S  *  *  Q  C  L  G  L  C  H  K  L  C  S  W  K  M  N  I  I  N  *  W  P  C  K  V  V  I  V  S  L  L  D  N  I  M  D  F  S  Y  I  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9032" stop="8232"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>798</number_coding_nucleotides>
                  <number_encoded_amino_acids>266</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMAASTMALSSPSFVGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="11396" e_stop="11230"/>
            <exon e_start="8587" e_stop="8373"/>
            <exon e_start="5972" e_stop="5778"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.892"/>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="0.963"/>
          <exon-only e_score="0.892"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.892">
            <gDNA_exon_boundary e_start="11396" e_stop="11230" e_length="167"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11229" i_stop="8588" i_length="2642"/>
          </intron>
          <exon e_serial="2" e_score="0.963">
            <gDNA_exon_boundary e_start="8587" e_stop="8373" e_length="215"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="8372" i_stop="5973" i_length="2400"/>
          </intron>
          <exon e_serial="3" e_score="0.892">
            <gDNA_exon_boundary e_start="5972" e_stop="5778" e_length="195"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11396" stop="11230"/>
              <exon start="8587" stop="8373"/>
              <exon start="5972" stop="5778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592342" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTGCAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAAATTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCA : ACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTGTTGATGGGAGCCGTTGAGGGATACCGCATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTTAAGGTTAAGGAGATCAAGAACGGCAGACTT : GCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACTGGAAAGGGACCATTGGAGAACCTTGCTGATCACCTTGCAGACCCAGTAAACAACAACGCCTGGTCCTACGCCACAAACTTTGTCCCCGGAAAATAAAAATCTTAAAACATTCTCAAGTTTCTGATCATTTGTTGACCATGTAAAGTTGTA</gDNA_template>
            <first_frame> T  Q  H  F  S  L  N  I  N  H  G  S  C  C  N  G  S  F  F  P  F  I  C  W  T  G  S  Q  T  L  T  I  C  L  R  K  F  W  K  W  K  D  H  Y  E  K  G  C  R  Q  V  C  P  I  *  Q :   P  K  L  G  P  C  T  K  H  L  G  H  L  G  L  S  S  C  V  D  G  S  R  *  G  I  P  H  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  Q  L  R  P  I  R  P  C  *  R  P  G  G  I  C  *  A  *  G  *  G  D  Q  E  R  Q  T   : C  Y  V  L  Y  V  W  I  L  C  S  S  H  C  Y  W  K  G  T  I  G  E  P  C  *  S  P  C  R  P  S  K  Q  Q  R  L  V  L  R  H  K  L  C  P  R  K  I  K  I  L  K  H  S  Q  V  S  D  H  L  L  T  M  *  S  C  </first_frame>
            <second_frame>  L  N  T  F  L  L  I  *  I  M  A  A  A  A  M  A  L  S  S  P  S  F  A  G  Q  A  V  K  L  S  P  S  A  S  E  N  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S   : N  P  S  L  V  H  A  Q  S  I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  :  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  S  Y  A  T  N  F  V  P  G  K  *  K  S  *  N  I  L  K  F  L  I  I  C  *  P  C  K  V  V </second_frame>
            <third_frame>   S  T  L  F  S  *  Y  K  S  W  Q  L  L  Q  W  L  F  L  P  L  H  L  L  D  R  Q  S  N  S  H  H  L  P  Q  K  I  L  E  M  E  G  S  L  *  E  R  L  S  P  S  L  P  H  L  A  :  T  Q  A  W  S  M  H  K  A  S  W  P  S  G  L  V  K  L  C  *  W  E  P  L  R  D  T  A  L  L  V  D  L  L  V  R  L  S  T  H  S  T  P  V  A  A  S  T  H  *  A  L  L  K  T  R  R  H  L  L  S  L  R  L  R  R  S  R  T  A  D  L :   L  C  S  L  C  L  D  S  L  F  K  P  L  L  L  E  R  D  H  W  R  T  L  L  I  T  L  Q  T  Q  *  T  T  T  P  G  P  T  P  Q  T  L  S  P  E  N  K  N  L  K  T  F  S  S  F  *  S  F  V  D  H  V  K  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11371" stop="11230"/>
                    <exon start="8587" stop="8373"/>
                    <exon start="5972" stop="5832"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>495</number_coding_nucleotides>
                  <number_encoded_amino_acids>165</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="10481" PGL_stop="11331"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10481" e_stop="10651"/>
            <exon e_start="10840" e_stop="11331"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="10481" e_stop="10651" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="10652" i_stop="10839" i_length="188"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="10840" e_stop="11331" e_length="492"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10481" stop="10651"/>
              <exon start="10840" stop="11331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591611" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAAAATAATCCATTCTAATGTCAAGTAATTACTGACAACTACTTTACAAGGCCATCAAACAATCAAATTTTAAGAATGTTTAAGATTTTCATTTTCCGGGAACAAAGTTTGTGGCGAAAGCCCAAGCGTTGTTGTTAACGGGGTCTGCAAGGTGGTCAGCAAGGTTTTC : CAATGCGGTAACCTTCAACGGCTCCCATCAACACAACTTGACAAGCCCAGATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCACCAAACTTTACACCGTTGCGGGCCAAGAGCTCAGGAAAGACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAGGTCTCAGGGTCAGCTGAAAGTCCAGCGGTATCCCAGCCGTAGTCACCAGGGAATTCGCCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGTCCCAAGTACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGAATTTTCTGAGGCAGATGGTGAGAGTTTGACTGCCTGTCCAGCAA</gDNA_template>
            <first_frame> K  K  I  I  H  S  N  V  K  *  L  L  T  T  T  L  Q  G  H  Q  T  I  K  F  *  E  C  L  R  F  S  F  S  G  N  K  V  C  G  E  S  P  S  V  V  V  N  G  V  C  K  V  V  S  K  V  F  :  Q  C  G  N  L  Q  R  L  P  S  T  Q  L  D  K  P  R  W  P  R  C  F  V  H  G  P  S  L  G  C  P  S  S  Q  V  H  P  R  *  R  S  G  I  R  P  *  T  T  Q  P  H  Q  T  L  H  R  C  G  P  R  A  Q  E  R  H  I  Q  E  H  Q  A  *  P  I  C  S  G  S  P  Q  V  H  G  S  W  Q  R  S  Q  G  Q  L  K  V  Q  R  Y  P  S  R  S  H  Q  G  I  R  Q  S  S  S  L  G  T  H  Q  R  M  V  P  S  T  *  H  G  Q  G  H  T  M  G  C  *  M  G  Q  T  W  R  Q  P  F  S  *  *  S  F  H  F  Q  N  F  L  R  Q  M  V  R  V  *  L  P  V  Q  Q </first_frame>
            <second_frame>  K  K  *  S  I  L  M  S  S  N  Y  *  Q  L  L  Y  K  A  I  K  Q  S  N  F  K  N  V  *  D  F  H  F  P  G  T  K  F  V  A  K  A  Q  A  L  L  L  T  G  S  A  R  W  S  A  R  F  S :   N  A  V  T  F  N  G  S  H  Q  H  N  L  T  S  P  D  G  Q  D  A  L  C  M  D  Q  A  W  V  A  Q  V  V  K  S  T  L  A  E  D  L  G  S  G  L  E  P  H  S  L  T  K  L  Y  T  V  A  G  Q  E  L  R  K  D  T  S  K  S  T  K  H  S  P  S  A  V  D  H  L  K  F  T  V  L  G  K  G  L  R  V  S  *  K  S  S  G  I  P  A  V  V  T  R  E  F  A  S  Q  V  A  W  G  L  T  R  E  W  S  Q  V  L  N  T  V  R  A  I  P  W  A  A  R  W  G  R  L  G  D  S  L  S  H  S  D  P  S  I  S  R  I  F  *  G  R  W  *  E  F  D  C  L  S  S   </second_frame>
            <third_frame>   K  N  N  P  F  *  C  Q  V  I  T  D  N  Y  F  T  R  P  S  N  N  Q  I  L  R  M  F  K  I  F  I  F  R  E  Q  S  L  W  R  K  P  K  R  C  C  *  R  G  L  Q  G  G  Q  Q  G  F   : P  M  R  *  P  S  T  A  P  I  N  T  T  *  Q  A  Q  M  A  K  M  L  C  A  W  T  K  L  G  L  P  K  *  S  S  P  P  S  L  K  I  W  D  P  A  L  N  H  T  A  S  P  N  F  T  P  L  R  A  K  S  S  G  K  T  H  P  R  A  P  S  I  A  H  L  Q  W  I  T  S  S  S  R  F  L  A  K  V  S  G  S  A  E  S  P  A  V  S  Q  P  *  S  P  G  N  S  P  V  K  *  L  G  D  S  P  E  N  G  P  K  Y  L  T  R  S  G  P  Y  H  G  L  L  D  G  A  D  L  A  T  A  F  L  I  V  I  L  P  F  P  E  F  S  E  A  D  G  E  S  L  T  A  C  P  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10566" stop="10651"/>
                    <exon start="10840" stop="11116"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DFHFPGTKFVAKAQALLLTGSARWSARFSNAVTFNGSHQHNLTSPDGQDALCMDQAWVAQVVKSTLAEDLGSGLEPHSLTKLYTVAGQELRKDTSKSTKHSPSAVDHLKFTVLGKGLRVS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="13863" PGL_stop="12865"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13863" e_stop="12865"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="13863" e_stop="12865" e_length="999"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13863" stop="12865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577291" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACCAACTTCAACAGTATCATCAAACACTTACATTTCTCTTGATATAAACACAATGGCAGCTGCAACAATGGCTCTTTCTTCCCCTTCTTTTGCTGGACAGGCGGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACTATGAGAAAGGCTGTCGCCAAGTCAGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACCGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTTTCAGCAGACCCAGAAACCTTTGCCAAGAACCGCGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGCTGTGTCTTCCCTGAGCTATTGGCTCGTAACGGCGTCAAGTTCGGTGAGGCTGTGTGGTTCAAAGCTGGATCCCAAATCTTCAGTGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGCCAAGTTGTACTCATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGCCCTCTTGGTGAGGTTGTCGACCCACTCTACCCTGGTGGCAGCTTCGACCCACTGGGTCTTGCTGAAGACCCAGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATCAAGAACGGTAGACTTGCCATGTTCTCTATGTTCGGATTCTTCGTTCAAGCTATTGTTACCGGAAAGGGTCCATTGGAGAACCTTGCTGACCACCTTGCAGACCCCGTTAACAACAACGCTTGGGCTTTTGCCACAAACTTTGTCCCCGGAAAATGAAACTTTTTAAACAATCTTAATATTCCTTGTAAAGTAGTAGTGAGTTACTTGACAATAGAATGGATTGTTTTTCTTTAATATTTCAATGTTTGTGTAGTACTGAGTAACATCTTACTAAGCTATGAATCAAATGTTGCCACTTTCATAA</gDNA_template>
            <first_frame> N  Q  L  Q  Q  Y  H  Q  T  L  T  F  L  L  I  *  T  Q  W  Q  L  Q  Q  W  L  F  L  P  L  L  L  L  D  R  R  *  N  S  H  P  L  P  Q  K  S  L  E  M  E  G  S  L  *  E  R  L  S  P  S  Q  P  H  L  A  A  H  G  M  A  L  T  V  L  S  T  W  D  H  S  L  V  S  H  Q  A  T  *  P  V  N  S  L  V  T  T  A  G  I  P  L  D  F  Q  Q  T  Q  K  P  L  P  R  T  A  N  L  R  *  S  T  A  D  G  L  C  L  V  L  L  A  V  S  S  L  S  Y  W  L  V  T  A  S  S  S  V  R  L  C  G  S  K  L  D  P  K  S  S  V  R  V  D  L  T  T  W  A  T  Q  A  W  S  M  H  K  A  S  W  P  S  G  L  A  K  L  Y  S  W  E  P  L  K  V  T  V  L  L  V  A  L  L  V  R  L  S  T  H  S  T  L  V  A  A  S  T  H  W  V  L  L  K  T  Q  R  H  L  L  S  S  R  *  R  R  S  R  T  V  D  L  P  C  S  L  C  S  D  S  S  F  K  L  L  L  P  E  R  V  H  W  R  T  L  L  T  T  L  Q  T  P  L  T  T  T  L  G  L  L  P  Q  T  L  S  P  E  N  E  T  F  *  T  I  L  I  F  L  V  K  *  *  *  V  T  *  Q  *  N  G  L  F  F  F  N  I  S  M  F  V  *  Y  *  V  T  S  Y  *  A  M  N  Q  M  L  P  L  S  * </first_frame>
            <second_frame>  T  N  F  N  S  I  I  K  H  L  H  F  S  *  Y  K  H  N  G  S  C  N  N  G  S  F  F  P  F  F  C  W  T  G  G  E  T  L  T  L  C  L  R  N  L  W  K  W  K  D  H  Y  E  K  G  C  R  Q  V  S  P  I  *  Q  P  M  V  W  P  *  P  C  *  V  L  G  T  I  L  W  *  V  T  K  L  L  D  R  *  I  P  W  *  L  R  L  G  Y  R  W  T  F  S  R  P  R  N  L  C  Q  E  P  R  T  *  G  D  P  L  Q  M  G  Y  A  W  C  S  W  L  C  L  P  *  A  I  G  S  *  R  R  Q  V  R  *  G  C  V  V  Q  S  W  I  P  N  L  Q  *  G  W  T  *  L  L  G  Q  P  K  L  G  P  C  T  K  H  L  G  H  L  G  L  P  S  C  T  H  G  S  R  *  R  L  P  Y  C  W  W  P  S  W  *  G  C  R  P  T  L  P  W  W  Q  L  R  P  T  G  S  C  *  R  P  R  G  I  C  *  A  Q  G  K  G  D  Q  E  R  *  T  C  H  V  L  Y  V  R  I  L  R  S  S  Y  C  Y  R  K  G  S  I  G  E  P  C  *  P  P  C  R  P  R  *  Q  Q  R  L  G  F  C  H  K  L  C  P  R  K  M  K  L  F  K  Q  S  *  Y  S  L  *  S  S  S  E  L  L  D  N  R  M  D  C  F  S  L  I  F  Q  C  L  C  S  T  E  *  H  L  T  K  L  *  I  K  C  C  H  F  H   </second_frame>
            <third_frame>   P  T  S  T  V  S  S  N  T  Y  I  S  L  D  I  N  T  M  A  A  A  T  M  A  L  S  S  P  S  F  A  G  Q  A  V  K  L  S  P  S  A  S  E  I  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S  S  P  W  Y  G  P  D  R  V  K  Y  L  G  P  F  S  G  E  S  P  S  Y  L  T  G  E  F  P  G  D  Y  G  W  D  T  A  G  L  S  A  D  P  E  T  F  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  V  W  F  K  A  G  S  Q  I  F  S  E  G  G  L  D  Y  L  G  N  P  S  L  V  H  A  Q  S  I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  N  F  L  N  N  L  N  I  P  C  K  V  V  V  S  Y  L  T  I  E  W  I  V  F  L  *  Y  F  N  V  C  V  V  L  S  N  I  L  L  S  Y  E  S  N  V  A  T  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13861" stop="13013"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>846</number_coding_nucleotides>
                  <number_encoded_amino_acids>282</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PTSTVSSNTYISLDINTMAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="20961" PGL_stop="19907"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20961" e_stop="19907"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="20961" e_stop="19907" e_length="1055"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20961" stop="19907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580483" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCATCACAGCCTTCAACAATATTTAATACCATAAAATACTCAACACTTTTCTCTTAATATAAATCATGGCAGCTGCTACAATGGCTCTTTCTTCCCCTTCATTTGCTGGACAGGCAGTCAAACTCTCACCATCTGCCTCAGAAATTTCTGGAAATGGAAGAATCACTATGAGAAAGGCTGTCGCCAAGTCTGCCCCATCTAGCAGCCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGACCATTCTCTGGTGAGTCACCAAGCTACTTGACTGGCGAATTCCCTGGTGACTATGGATGGGATACCGCTGGACTTTCAGCTGACCCCGAGACCTTTGCCAAGAACCGTGAACTTGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTCTTGGCCCGTAATGGTGTCAAATTTGGTGAAGCTGTGTGGTTCAAGGCCGGTTCCCAGATTTTCAGCGAGGGTGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAAAGCATCTTGGCCATCTGGGCTTGTCAAGTTGTACTGATGGGAGCTGTTGAGGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCAGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAGACCCGGAGGCATTTGCTGAGCTCAAGGTAAAGGAGATTAAGAACGGCAGACTTGCTATGTTCTCTATGTTTGGATTCTTTGTTCAAGCCATTGTTACCGGAAAGGGTCCATTGGAGAATCTTGCTGACCACCTTGCAGATCCAGTTAACAACAATGCATGGGCCTTTGCCACAAACTTTGTTCCCGGCAAATGAATATCATAAAATGTTCTCTAGATATTATTGTTTGATGGCTTTGTAAAGTTTTAGTTGTGAGTTTACTTGACAATAGAATGATTTTTTCTTAGTCCTGAATTTCATTTGATGAATGAAATACTGCAAAATTCATATTGAAGGGGAAAATTGATGACGAAGCAAAATTAACAAGACCAGAGTTAAATTTGAGG</gDNA_template>
            <first_frame> L  I  T  A  F  N  N  I  *  Y  H  K  I  L  N  T  F  L  L  I  *  I  M  A  A  A  T  M  A  L  S  S  P  S  F  A  G  Q  A  V  K  L  S  P  S  A  S  E  I  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S  S  P  W  Y  G  P  D  R  V  K  Y  L  G  P  F  S  G  E  S  P  S  Y  L  T  G  E  F  P  G  D  Y  G  W  D  T  A  G  L  S  A  D  P  E  T  F  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  V  W  F  K  A  G  S  Q  I  F  S  E  G  G  L  D  Y  L  G  N  P  S  L  V  H  A  Q  S  I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E  D  P  E  A  F  A  E  L  K  V  K  E  I  K  N  G  R  L  A  M  F  S  M  F  G  F  F  V  Q  A  I  V  T  G  K  G  P  L  E  N  L  A  D  H  L  A  D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  I  S  *  N  V  L  *  I  L  L  F  D  G  F  V  K  F  *  L  *  V  Y  L  T  I  E  *  F  F  L  S  P  E  F  H  L  M  N  E  I  L  Q  N  S  Y  *  R  G  K  L  M  T  K  Q  N  *  Q  D  Q  S  *  I  *   </first_frame>
            <second_frame>  S  S  Q  P  S  T  I  F  N  T  I  K  Y  S  T  L  F  S  *  Y  K  S  W  Q  L  L  Q  W  L  F  L  P  L  H  L  L  D  R  Q  S  N  S  H  H  L  P  Q  K  F  L  E  M  E  E  S  L  *  E  R  L  S  P  S  L  P  H  L  A  A  H  G  M  A  L  T  V  L  S  T  W  D  H  S  L  V  S  H  Q  A  T  *  L  A  N  S  L  V  T  M  D  G  I  P  L  D  F  Q  L  T  P  R  P  L  P  R  T  V  N  L  R  *  S  T  A  D  G  L  C  L  V  L  L  D  V  S  S  L  S  S  W  P  V  M  V  S  N  L  V  K  L  C  G  S  R  P  V  P  R  F  S  A  R  V  D  L  T  T  W  A  T  Q  A  W  S  M  H  K  A  S  W  P  S  G  L  V  K  L  Y  *  W  E  L  L  R  V  T  V  L  L  V  D  L  L  V  R  L  S  T  H  S  T  Q  V  A  A  S  T  H  *  A  L  L  K  T  R  R  H  L  L  S  S  R  *  R  R  L  R  T  A  D  L  L  C  S  L  C  L  D  S  L  F  K  P  L  L  P  E  R  V  H  W  R  I  L  L  T  T  L  Q  I  Q  L  T  T  M  H  G  P  L  P  Q  T  L  F  P  A  N  E  Y  H  K  M  F  S  R  Y  Y  C  L  M  A  L  *  S  F  S  C  E  F  T  *  Q  *  N  D  F  F  L  V  L  N  F  I  *  *  M  K  Y  C  K  I  H  I  E  G  E  N  *  *  R  S  K  I  N  K  T  R  V  K  F  E  </second_frame>
            <third_frame>   H  H  S  L  Q  Q  Y  L  I  P  *  N  T  Q  H  F  S  L  N  I  N  H  G  S  C  Y  N  G  S  F  F  P  F  I  C  W  T  G  S  Q  T  L  T  I  C  L  R  N  F  W  K  W  K  N  H  Y  E  K  G  C  R  Q  V  C  P  I  *  Q  P  M  V  W  P  *  P  C  *  V  L  G  T  I  L  W  *  V  T  K  L  L  D  W  R  I  P  W  *  L  W  M  G  Y  R  W  T  F  S  *  P  R  D  L  C  Q  E  P  *  T  *  G  D  P  L  Q  M  G  Y  A  W  C  S  W  M  C  L  P  *  A  L  G  P  *  W  C  Q  I  W  *  S  C  V  V  Q  G  R  F  P  D  F  Q  R  G  W  T  *  L  L  G  Q  P  K  L  G  P  C  T  K  H  L  G  H  L  G  L  S  S  C  T  D  G  S  C  *  G  L  P  Y  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  Q  L  R  P  I  R  P  C  *  R  P  G  G  I  C  *  A  Q  G  K  G  D  *  E  R  Q  T  C  Y  V  L  Y  V  W  I  L  C  S  S  H  C  Y  R  K  G  S  I  G  E  S  C  *  P  P  C  R  S  S  *  Q  Q  C  M  G  L  C  H  K  L  C  S  R  Q  M  N  I  I  K  C  S  L  D  I  I  V  *  W  L  C  K  V  L  V  V  S  L  L  D  N  R  M  I  F  S  *  S  *  I  S  F  D  E  *  N  T  A  K  F  I  L  K  G  K  I  D  D  E  A  K  L  T  R  P  E  L  N  L  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20898" stop="20098"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>798</number_coding_nucleotides>
                  <number_encoded_amino_acids>266</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="21292" PGL_stop="21902"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21292" e_stop="21902"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="21292" e_stop="21902" e_length="611"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21292" stop="21902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603757" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGTTATGGTTTAGGAAATTTGAGGAGAAGTTGAAACTAATTACTACTTGATTCATATATTTTGGGAACTTAATAATGCATCTTTATGTTCAGAAAGCAATGTGATTGAAACTTTATTATATTAAACCCTAATTAGCAAAGTTGTTTATGTTAGCCAAACAGGTTATATTGTATTATGCTCATTCACAATACTACATGAGCAATGCTGAGACTTGGAAAGAGCTTGTTCCGAAGAATATGAGCAAAGATTTTAATTTGTTGGAATTCATCAGCATCACAATTTTGGCTGTGTTAAGGGAAAAAGAAATTACATTAGTAAACTTTAACATGTGATAGTAGGTCAATTCACATTTTTTACCAGACTACAGATTAATGTTATCAAGTGATTTGCCTTTAATTACTTACTTAGAAATTTGATTGTGTAAATATTGTTTATGTTATTAGTGCGTAGAACTTGAATTTGTTGTCAAAAAGTGTCATATTTTGCATAAACTTGTGTCTTCTTCTAACTACATATGTATGTCCGTTGGCTCTGGTCATTATTATGTACCTTGTTTTGAAGGATCTGTCAATGATGCTTTTAATCTAAAGATAGTACCACATGAGGAAG</gDNA_template>
            <first_frame> R  V  M  V  *  E  I  *  G  E  V  E  T  N  Y  Y  L  I  H  I  F  W  E  L  N  N  A  S  L  C  S  E  S  N  V  I  E  T  L  L  Y  *  T  L  I  S  K  V  V  Y  V  S  Q  T  G  Y  I  V  L  C  S  F  T  I  L  H  E  Q  C  *  D  L  E  R  A  C  S  E  E  Y  E  Q  R  F  *  F  V  G  I  H  Q  H  H  N  F  G  C  V  K  G  K  R  N  Y  I  S  K  L  *  H  V  I  V  G  Q  F  T  F  F  T  R  L  Q  I  N  V  I  K  *  F  A  F  N  Y  L  L  R  N  L  I  V  *  I  L  F  M  L  L  V  R  R  T  *  I  C  C  Q  K  V  S  Y  F  A  *  T  C  V  F  F  *  L  H  M  Y  V  R  W  L  W  S  L  L  C  T  L  F  *  R  I  C  Q  *  C  F  *  S  K  D  S  T  T  *  G   </first_frame>
            <second_frame>  E  L  W  F  R  K  F  E  E  K  L  K  L  I  T  T  *  F  I  Y  F  G  N  L  I  M  H  L  Y  V  Q  K  A  M  *  L  K  L  Y  Y  I  K  P  *  L  A  K  L  F  M  L  A  K  Q  V  I  L  Y  Y  A  H  S  Q  Y  Y  M  S  N  A  E  T  W  K  E  L  V  P  K  N  M  S  K  D  F  N  L  L  E  F  I  S  I  T  I  L  A  V  L  R  E  K  E  I  T  L  V  N  F  N  M  *  *  *  V  N  S  H  F  L  P  D  Y  R  L  M  L  S  S  D  L  P  L  I  T  Y  L  E  I  *  L  C  K  Y  C  L  C  Y  *  C  V  E  L  E  F  V  V  K  K  C  H  I  L  H  K  L  V  S  S  S  N  Y  I  C  M  S  V  G  S  G  H  Y  Y  V  P  C  F  E  G  S  V  N  D  A  F  N  L  K  I  V  P  H  E  E  </second_frame>
            <third_frame>   S  Y  G  L  G  N  L  R  R  S  *  N  *  L  L  L  D  S  Y  I  L  G  T  *  *  C  I  F  M  F  R  K  Q  C  D  *  N  F  I  I  L  N  P  N  *  Q  S  C  L  C  *  P  N  R  L  Y  C  I  M  L  I  H  N  T  T  *  A  M  L  R  L  G  K  S  L  F  R  R  I  *  A  K  I  L  I  C  W  N  S  S  A  S  Q  F  W  L  C  *  G  K  K  K  L  H  *  *  T  L  T  C  D  S  R  S  I  H  I  F  Y  Q  T  T  D  *  C  Y  Q  V  I  C  L  *  L  L  T  *  K  F  D  C  V  N  I  V  Y  V  I  S  A  *  N  L  N  L  L  S  K  S  V  I  F  C  I  N  L  C  L  L  L  T  T  Y  V  C  P  L  A  L  V  I  I  M  Y  L  V  L  K  D  L  S  M  M  L  L  I  *  R  *  Y  H  M  R  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21425" stop="21625"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LAKLFMLAKQVILYYAHSQYYMSNAETWKELVPKNMSKDFNLLEFISITILAVLREKEITLVNFNM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="22344" PGL_stop="22733"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22344" e_stop="22733"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.954"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="22344" e_stop="22733" e_length="390"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22344" stop="22733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591971" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAAAAAATCCATTCTATTAAGTCACAACTACTTTACAGGGCCATCAAACAATCAAAATTCAAAAAATATATTATGATATTCATTTTCCGGGGACAAAGTTTGTGGCGAAAGCCCAAGCGTTGTTGTTAACGGGGTCTGCAAGGTGGTCAGCAAGGTTCTCCAATGGACCCTTTCCGGTAACAATGGCCTGAACAAAGAATCCGAACATAGAGAACATAGCAAGTCTGCCGTTCTTAATCTCCTTTACCTTGAGCTCAGCAAATGCCTCGGGGTCTTCAGCAAGGCCTAATGGGTCGAAGCTGCCACCGGGGTAGAGTGGGTCGACAACCTCACCAAGAGGTCCACCAGCAATACGGTAACCTTCAACGGCTCCCATCAAGACAACTT</gDNA_template>
            <first_frame> E  K  K  I  H  S  I  K  S  Q  L  L  Y  R  A  I  K  Q  S  K  F  K  K  Y  I  M  I  F  I  F  R  G  Q  S  L  W  R  K  P  K  R  C  C  *  R  G  L  Q  G  G  Q  Q  G  S  P  M  D  P  F  R  *  Q  W  P  E  Q  R  I  R  T  *  R  T  *  Q  V  C  R  S  *  S  P  L  P  *  A  Q  Q  M  P  R  G  L  Q  Q  G  L  M  G  R  S  C  H  R  G  R  V  G  R  Q  P  H  Q  E  V  H  Q  Q  Y  G  N  L  Q  R  L  P  S  R  Q  L </first_frame>
            <second_frame>  K  K  K  S  I  L  L  S  H  N  Y  F  T  G  P  S  N  N  Q  N  S  K  N  I  L  *  Y  S  F  S  G  D  K  V  C  G  E  S  P  S  V  V  V  N  G  V  C  K  V  V  S  K  V  L  Q  W  T  L  S  G  N  N  G  L  N  K  E  S  E  H  R  E  H  S  K  S  A  V  L  N  L  L  Y  L  E  L  S  K  C  L  G  V  F  S  K  A  *  W  V  E  A  A  T  G  V  E  W  V  D  N  L  T  K  R  S  T  S  N  T  V  T  F  N  G  S  H  Q  D  N   </second_frame>
            <third_frame>   K  K  N  P  F  Y  *  V  T  T  T  L  Q  G  H  Q  T  I  K  I  Q  K  I  Y  Y  D  I  H  F  P  G  T  K  F  V  A  K  A  Q  A  L  L  L  T  G  S  A  R  W  S  A  R  F  S  N  G  P  F  P  V  T  M  A  *  T  K  N  P  N  I  E  N  I  A  S  L  P  F  L  I  S  F  T  L  S  S  A  N  A  S  G  S  S  A  R  P  N  G  S  K  L  P  P  G  *  S  G  S  T  T  S  P  R  G  P  P  A  I  R  *  P  S  T  A  P  I  K  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22423" stop="22635"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSFSGDKVCGESPSVVVNGVCKVVSKVLQWTLSGNNGLNKESEHREHSKSAVLNLLYLELSKCLGVFSKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="23255" PGL_stop="22419"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23255" e_stop="22620"/>
            <exon e_start="22481" e_stop="22419"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="23255" e_stop="22620" e_length="636"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22619" i_stop="22482" i_length="138"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22481" e_stop="22419" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23255" stop="22620"/>
              <exon start="22481" stop="22419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592240" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAACTCCCTCATTTTCCTCTCTTTAAAAACCATGGCAGCTGCTACAATGGCTCTTTCTTCTCCTTCTTTTGCCGGACAGGCAGTGAAACTCTCACCCTCTGCCTCAGAAATCTCTGGAAATGGAAGGATCACCATGAGAAAGGCTGTTGCCAAGTCTGCCCCATCTAGCAGTCCATGGTATGGCCCTGACCGTGTTAAGTACTTGGGCCCATTCTCTGGTGAGTCCCCAAGCTACTTGACTGGTGAATTCCCTGGTGACTACGGCTGGGATACCGCTGGACTCTCAGCAGACCCTGAAACCTTTGCCAAGAACCGTGAACTCGAGGTGATCCACTGCAGATGGGCTATGCTTGGTGCTCTTGGATGTGTCTTCCCTGAGCTATTGGCCCGTAACGGTGTCAAGTTCGGTGAGGCTGTGTGGTTCAAGGCCGGATCCCAGATCTTCAGCGAGGGAGGACTTGACTACTTGGGCAACCCAAGCTTGGTCCATGCACAGAGCATCTTAGCCATCTGGGCTTGCCAAGTTGTCTTGATGGGAGCCGTTGAAGGTTACCGTATTGCTGGTGGACCTCTTGGTGAGGTTGTCGACCCACTCTACCCCGGTGGCAGCTTCGACCCATTAGGCCTTGCTGAAG : ACCCCGTTAACAACAACGCTTGGGCTTTCGCCACAAACTTTGTCCCCGGAAAATGAATATCAT</gDNA_template>
            <first_frame> A  T  P  S  F  S  S  L  *  K  P  W  Q  L  L  Q  W  L  F  L  L  L  L  L  P  D  R  Q  *  N  S  H  P  L  P  Q  K  S  L  E  M  E  G  S  P  *  E  R  L  L  P  S  L  P  H  L  A  V  H  G  M  A  L  T  V  L  S  T  W  A  H  S  L  V  S  P  Q  A  T  *  L  V  N  S  L  V  T  T  A  G  I  P  L  D  S  Q  Q  T  L  K  P  L  P  R  T  V  N  S  R  *  S  T  A  D  G  L  C  L  V  L  L  D  V  S  S  L  S  Y  W  P  V  T  V  S  S  S  V  R  L  C  G  S  R  P  D  P  R  S  S  A  R  E  D  L  T  T  W  A  T  Q  A  W  S  M  H  R  A  S  *  P  S  G  L  A  K  L  S  *  W  E  P  L  K  V  T  V  L  L  V  D  L  L  V  R  L  S  T  H  S  T  P  V  A  A  S  T  H  *  A  L  L  K  :  T  P  L  T  T  T  L  G  L  S  P  Q  T  L  S  P  E  N  E  Y  H </first_frame>
            <second_frame>  Q  L  P  H  F  P  L  F  K  N  H  G  S  C  Y  N  G  S  F  F  S  F  F  C  R  T  G  S  E  T  L  T  L  C  L  R  N  L  W  K  W  K  D  H  H  E  K  G  C  C  Q  V  C  P  I  *  Q  S  M  V  W  P  *  P  C  *  V  L  G  P  I  L  W  *  V  P  K  L  L  D  W  *  I  P  W  *  L  R  L  G  Y  R  W  T  L  S  R  P  *  N  L  C  Q  E  P  *  T  R  G  D  P  L  Q  M  G  Y  A  W  C  S  W  M  C  L  P  *  A  I  G  P  *  R  C  Q  V  R  *  G  C  V  V  Q  G  R  I  P  D  L  Q  R  G  R  T  *  L  L  G  Q  P  K  L  G  P  C  T  E  H  L  S  H  L  G  L  P  S  C  L  D  G  S  R  *  R  L  P  Y  C  W  W  T  S  W  *  G  C  R  P  T  L  P  R  W  Q  L  R  P  I  R  P  C  *  R :   P  R  *  Q  Q  R  L  G  F  R  H  K  L  C  P  R  K  M  N  I   </second_frame>
            <third_frame>   N  S  L  I  F  L  S  L  K  T  M  A  A  A  T  M  A  L  S  S  P  S  F  A  G  Q  A  V  K  L  S  P  S  A  S  E  I  S  G  N  G  R  I  T  M  R  K  A  V  A  K  S  A  P  S  S  S  P  W  Y  G  P  D  R  V  K  Y  L  G  P  F  S  G  E  S  P  S  Y  L  T  G  E  F  P  G  D  Y  G  W  D  T  A  G  L  S  A  D  P  E  T  F  A  K  N  R  E  L  E  V  I  H  C  R  W  A  M  L  G  A  L  G  C  V  F  P  E  L  L  A  R  N  G  V  K  F  G  E  A  V  W  F  K  A  G  S  Q  I  F  S  E  G  G  L  D  Y  L  G  N  P  S  L  V  H  A  Q  S  I  L  A  I  W  A  C  Q  V  V  L  M  G  A  V  E  G  Y  R  I  A  G  G  P  L  G  E  V  V  D  P  L  Y  P  G  G  S  F  D  P  L  G  L  A  E   : D  P  V  N  N  N  A  W  A  F  A  T  N  F  V  P  G  K  *  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23253" stop="22620"/>
                    <exon start="22481" stop="22426"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSLIFLSLKTMAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPVNNNAWAFATNFVPGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="24419" PGL_stop="25147"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24419" e_stop="25147"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="24419" e_stop="25147" e_length="729"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24419" stop="25147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598087" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGTAAATTCTATTCACAATAAGATTTTTAAGACATATACAGTACATAAGCAAAAGTTATTTGGTTCTCGTAAACTCGTACCTGAAACTCTGGATCTAACCCTGGATATCAAAGCTCTTTATTCAGAAAATACCTTAAAATAACATACCAAAAAATCCCAAATCGGCCTAAAATTTCAAACAGAAGTGATTAAATTGTCCTTTGCAGCAGTTGGCGCTCTTTTTCCTTTCCATTTCTTCAACCTTCAACAACTAAAACCCTAAAACCCAATTCAAATTCTGATTCACCAAAAAAATAATTCAAAGACCTTCTCCACATTCCAATTTCTTCTCATCTCTCAAACAATTGGAGAAAAGATTGAAACTTGATGATTCATCTAAACGTGAAGCTGTCGAGACACCAACCCAGTCTTTGATCAGCCGATTATACCTCAACTGTGATGAGACCCCTGCTGACTCCATCACCAGATCCACAAACCTCAAAAAAAGTGAAGGCCCACTTCAATTTCTCTCAAATTCCTCACTTGCCCAAGAAAGTGTTGGTATAGTTGAAGCTGGTGGTAATGGGGTTGATGAGATTGAACTGATGATGCAGCTATTGGGTTTTCGGAGAGTGAAAGGGAAGGACCCAAAAGGGTGGAAGTGGATTTTGGCTGTGATGATGCATTTTATGGAAACATTGTTGGGGTTCAGGGTCCAAAAAGTGAAAAAGAAATGGAGAGGTTTGTG</gDNA_template>
            <first_frame> R  V  N  S  I  H  N  K  I  F  K  T  Y  T  V  H  K  Q  K  L  F  G  S  R  K  L  V  P  E  T  L  D  L  T  L  D  I  K  A  L  Y  S  E  N  T  L  K  *  H  T  K  K  S  Q  I  G  L  K  F  Q  T  E  V  I  K  L  S  F  A  A  V  G  A  L  F  P  F  H  F  F  N  L  Q  Q  L  K  P  *  N  P  I  Q  I  L  I  H  Q  K  N  N  S  K  T  F  S  T  F  Q  F  L  L  I  S  Q  T  I  G  E  K  I  E  T  *  *  F  I  *  T  *  S  C  R  D  T  N  P  V  F  D  Q  P  I  I  P  Q  L  *  *  D  P  C  *  L  H  H  Q  I  H  K  P  Q  K  K  *  R  P  T  S  I  S  L  K  F  L  T  C  P  R  K  C  W  Y  S  *  S  W  W  *  W  G  *  *  D  *  T  D  D  A  A  I  G  F  S  E  S  E  R  E  G  P  K  R  V  E  V  D  F  G  C  D  D  A  F  Y  G  N  I  V  G  V  Q  G  P  K  S  E  K  E  M  E  R  F  V </first_frame>
            <second_frame>  E  *  I  L  F  T  I  R  F  L  R  H  I  Q  Y  I  S  K  S  Y  L  V  L  V  N  S  Y  L  K  L  W  I  *  P  W  I  S  K  L  F  I  Q  K  I  P  *  N  N  I  P  K  N  P  K  S  A  *  N  F  K  Q  K  *  L  N  C  P  L  Q  Q  L  A  L  F  F  L  S  I  S  S  T  F  N  N  *  N  P  K  T  Q  F  K  F  *  F  T  K  K  I  I  Q  R  P  S  P  H  S  N  F  F  S  S  L  K  Q  L  E  K  R  L  K  L  D  D  S  S  K  R  E  A  V  E  T  P  T  Q  S  L  I  S  R  L  Y  L  N  C  D  E  T  P  A  D  S  I  T  R  S  T  N  L  K  K  S  E  G  P  L  Q  F  L  S  N  S  S  L  A  Q  E  S  V  G  I  V  E  A  G  G  N  G  V  D  E  I  E  L  M  M  Q  L  L  G  F  R  R  V  K  G  K  D  P  K  G  W  K  W  I  L  A  V  M  M  H  F  M  E  T  L  L  G  F  R  V  Q  K  V  K  K  K  W  R  G  L   </second_frame>
            <third_frame>   S  K  F  Y  S  Q  *  D  F  *  D  I  Y  S  T  *  A  K  V  I  W  F  S  *  T  R  T  *  N  S  G  S  N  P  G  Y  Q  S  S  L  F  R  K  Y  L  K  I  T  Y  Q  K  I  P  N  R  P  K  I  S  N  R  S  D  *  I  V  L  C  S  S  W  R  S  F  S  F  P  F  L  Q  P  S  T  T  K  T  L  K  P  N  S  N  S  D  S  P  K  K  *  F  K  D  L  L  H  I  P  I  S  S  H  L  S  N  N  W  R  K  D  *  N  L  M  I  H  L  N  V  K  L  S  R  H  Q  P  S  L  *  S  A  D  Y  T  S  T  V  M  R  P  L  L  T  P  S  P  D  P  Q  T  S  K  K  V  K  A  H  F  N  F  S  Q  I  P  H  L  P  K  K  V  L  V  *  L  K  L  V  V  M  G  L  M  R  L  N  *  *  C  S  Y  W  V  F  G  E  *  K  G  R  T  Q  K  G  G  S  G  F  W  L  *  *  C  I  L  W  K  H  C  W  G  S  G  S  K  K  *  K  R  N  G  E  V  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24702" stop="25145"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FTKKIIQRPSPHSNFFSSLKQLEKRLKLDDSSKREAVETPTQSLISRLYLNCDETPADSITRSTNLKKSEGPLQFLSNSSLAQESVGIVEAGGNGVDEIELMMQLLGFRRVKGKDPKGWKWILAVMMHFMETLLGFRVQKVKKKWRGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="26737" PGL_stop="27600"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26737" e_stop="27600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="26737" e_stop="27600" e_length="864"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26737" stop="27600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599651" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCCAAGCATAACCGAGCACCTTAACCAGGTTCCTGTGTTTGAGTTGGCTCAGAGTCTTGACTTCCCTATCAAAGCATTTACGAATTTCTGCTGAGAACTGAAGATTCAGTTTCTTAACTGCTACAATTTTCCCACCTTCCAGTGTTCCTTTGTACACATTACTTGAACTGCTGGCTCCAATAATGTTTTGTGGACTGAAATTATCAGTAGCATGTTCCAAATCCTTTTGATAAAATCTCTGGAGGCTAAGTGCTGAGGTATAATTTGGAATTATATCCTCCGAGTCTTTCACTTTTTGCTTCTTCATGTACAGATGACACACAAATATTCCCACCACATGAAGAATGAGAACCAAAACAGGCCCAAGTATGATCCAGGTTTTCTTGGACAACCCATGAGAACTTGTTTGGTTTCTTTTGATGCTGCATGGACTGAGAAACTCCGTTCCACATAGCGATGGATTTCCCTGTAAATCTGCTGACCTTAAGTTGTCGAATACACCCCCCTTTGGAATGTGACCTTCAAGCTGGTTAAAAGAAAGGTTGAGATATATTAATGCAGGCATATTGGCAAATCTCTCAGGAATGATTCCCTTGAACTTGTTTTGTGAAAGATCAAGTGAGCGAAGATGTAGCAATCCTACCATTTCAGGAAGTTTGCCTTCTAATCTGTTCCTTGAGAGGTTCAAGAATACTAGCTCACTTAACTTGGTCAGAATTTCGCCTGGAGCAGGACCAGACAGCATGTTTCCTGACAGGTCCAGTGAGAATAAGTTTTTGCAGCGTCCTAGGGATCTGGGAATGTTGCCTGATAGATTGTTGTTTGACATATCAATCCCTTGAACCATTTCTAACATGCCAATC</gDNA_template>
            <first_frame> S  Q  A  *  P  S  T  L  T  R  F  L  C  L  S  W  L  R  V  L  T  S  L  S  K  H  L  R  I  S  A  E  N  *  R  F  S  F  L  T  A  T  I  F  P  P  S  S  V  P  L  Y  T  L  L  E  L  L  A  P  I  M  F  C  G  L  K  L  S  V  A  C  S  K  S  F  *  *  N  L  W  R  L  S  A  E  V  *  F  G  I  I  S  S  E  S  F  T  F  C  F  F  M  Y  R  *  H  T  N  I  P  T  T  *  R  M  R  T  K  T  G  P  S  M  I  Q  V  F  L  D  N  P  *  E  L  V  W  F  L  L  M  L  H  G  L  R  N  S  V  P  H  S  D  G  F  P  C  K  S  A  D  L  K  L  S  N  T  P  P  F  G  M  *  P  S  S  W  L  K  E  R  L  R  Y  I  N  A  G  I  L  A  N  L  S  G  M  I  P  L  N  L  F  C  E  R  S  S  E  R  R  C  S  N  P  T  I  S  G  S  L  P  S  N  L  F  L  E  R  F  K  N  T  S  S  L  N  L  V  R  I  S  P  G  A  G  P  D  S  M  F  P  D  R  S  S  E  N  K  F  L  Q  R  P  R  D  L  G  M  L  P  D  R  L  L  F  D  I  S  I  P  *  T  I  S  N  M  P  I </first_frame>
            <second_frame>  P  K  H  N  R  A  P  *  P  G  S  C  V  *  V  G  S  E  S  *  L  P  Y  Q  S  I  Y  E  F  L  L  R  T  E  D  S  V  S  *  L  L  Q  F  S  H  L  P  V  F  L  C  T  H  Y  L  N  C  W  L  Q  *  C  F  V  D  *  N  Y  Q  *  H  V  P  N  P  F  D  K  I  S  G  G  *  V  L  R  Y  N  L  E  L  Y  P  P  S  L  S  L  F  A  S  S  C  T  D  D  T  Q  I  F  P  P  H  E  E  *  E  P  K  Q  A  Q  V  *  S  R  F  S  W  T  T  H  E  N  L  F  G  F  F  *  C  C  M  D  *  E  T  P  F  H  I  A  M  D  F  P  V  N  L  L  T  L  S  C  R  I  H  P  P  L  E  C  D  L  Q  A  G  *  K  K  G  *  D  I  L  M  Q  A  Y  W  Q  I  S  Q  E  *  F  P  *  T  C  F  V  K  D  Q  V  S  E  D  V  A  I  L  P  F  Q  E  V  C  L  L  I  C  S  L  R  G  S  R  I  L  A  H  L  T  W  S  E  F  R  L  E  Q  D  Q  T  A  C  F  L  T  G  P  V  R  I  S  F  C  S  V  L  G  I  W  E  C  C  L  I  D  C  C  L  T  Y  Q  S  L  E  P  F  L  T  C  Q   </second_frame>
            <third_frame>   P  S  I  T  E  H  L  N  Q  V  P  V  F  E  L  A  Q  S  L  D  F  P  I  K  A  F  T  N  F  C  *  E  L  K  I  Q  F  L  N  C  Y  N  F  P  T  F  Q  C  S  F  V  H  I  T  *  T  A  G  S  N  N  V  L  W  T  E  I  I  S  S  M  F  Q  I  L  L  I  K  S  L  E  A  K  C  *  G  I  I  W  N  Y  I  L  R  V  F  H  F  L  L  L  H  V  Q  M  T  H  K  Y  S  H  H  M  K  N  E  N  Q  N  R  P  K  Y  D  P  G  F  L  G  Q  P  M  R  T  C  L  V  S  F  D  A  A  W  T  E  K  L  R  S  T  *  R  W  I  S  L  *  I  C  *  P  *  V  V  E  Y  T  P  L  W  N  V  T  F  K  L  V  K  R  K  V  E  I  Y  *  C  R  H  I  G  K  S  L  R  N  D  S  L  E  L  V  L  *  K  I  K  *  A  K  M  *  Q  S  Y  H  F  R  K  F  A  F  *  S  V  P  *  E  V  Q  E  Y  *  L  T  *  L  G  Q  N  F  A  W  S  R  T  R  Q  H  V  S  *  Q  V  Q  *  E  *  V  F  A  A  S  *  G  S  G  N  V  A  *  *  I  V  V  *  H  I  N  P  L  N  H  F  *  H  A  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27256" stop="27579"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSSWLKERLRYINAGILANLSGMIPLNLFCERSSERRCSNPTISGSLPSNLFLERFKNTSSLNLVRISPGAGPDSMFPDRSSENKFLQRPRDLGMLPDRLLFDISIP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27335" stop="27598"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCFVKDQVSEDVAILPFQEVCLLICSLRGSRILAHLTWSEFRLEQDQTACFLTGPVRISFCSVLGIWECCLIDCCLTYQSLEPFLTCQ</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26994" stop="27191"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIIWNYILRVFHFLLLHVQMTHKYSHHMKNENQNRPKYDPGFLGQPMRTCLVSFDAAWTEKLRST*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="33404" PGL_stop="33835"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33404" e_stop="33835"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="33404" e_stop="33835" e_length="432"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33404" stop="33835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597978" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGGCTTGAAATACGGAAAAATTATTTAAATAGTAAATGCATTTTAAGTTATGAACTAGTTCCATTAGCCACCATGGGAAACTTGGTGGTGGTTCACATTAAGAGTGATGATATTCCAGCTTCTTCTACATCAAATTTAATCTTTTACCAAATGAGAAGGCATACAGTCCATCTTACTTAGCTTTGAAAGAGAAGACAGAACTTGTTCCATGTCAGGTCTATCTTCAGGATCAGGAGAGGTGCAGGACAAAGCCAAGTTAAGAAGTCCCTCTACTACATCCTGTTTCTTGGAGACATATGAAGCTAGATTAGGATCCACAATCTGAACTAGCTTGTTTATGCCATTCGCAAGGGCATTCTGAACAATTTGATGCAAAGTAATTGGTAATTCATCTGCTCCTGTAAGACTTGTTGGCCTTCTTTTTGTAATGA</gDNA_template>
            <first_frame> M  A  *  N  T  E  K  L  F  K  *  *  M  H  F  K  L  *  T  S  S  I  S  H  H  G  K  L  G  G  G  S  H  *  E  *  *  Y  S  S  F  F  Y  I  K  F  N  L  L  P  N  E  K  A  Y  S  P  S  Y  L  A  L  K  E  K  T  E  L  V  P  C  Q  V  Y  L  Q  D  Q  E  R  C  R  T  K  P  S  *  E  V  P  L  L  H  P  V  S  W  R  H  M  K  L  D  *  D  P  Q  S  E  L  A  C  L  C  H  S  Q  G  H  S  E  Q  F  D  A  K  *  L  V  I  H  L  L  L  *  D  L  L  A  F  F  L  *  * </first_frame>
            <second_frame>  W  L  E  I  R  K  N  Y  L  N  S  K  C  I  L  S  Y  E  L  V  P  L  A  T  M  G  N  L  V  V  V  H  I  K  S  D  D  I  P  A  S  S  T  S  N  L  I  F  Y  Q  M  R  R  H  T  V  H  L  T  *  L  *  K  R  R  Q  N  L  F  H  V  R  S  I  F  R  I  R  R  G  A  G  Q  S  Q  V  K  K  S  L  Y  Y  I  L  F  L  G  D  I  *  S  *  I  R  I  H  N  L  N  *  L  V  Y  A  I  R  K  G  I  L  N  N  L  M  Q  S  N  W  *  F  I  C  S  C  K  T  C  W  P  S  F  C  N   </second_frame>
            <third_frame>   G  L  K  Y  G  K  I  I  *  I  V  N  A  F  *  V  M  N  *  F  H  *  P  P  W  E  T  W  W  W  F  T  L  R  V  M  I  F  Q  L  L  L  H  Q  I  *  S  F  T  K  *  E  G  I  Q  S  I  L  L  S  F  E  R  E  D  R  T  C  S  M  S  G  L  S  S  G  S  G  E  V  Q  D  K  A  K  L  R  S  P  S  T  T  S  C  F  L  E  T  Y  E  A  R  L  G  S  T  I  *  T  S  L  F  M  P  F  A  R  A  F  *  T  I  *  C  K  V  I  G  N  S  S  A  P  V  R  L  V  G  L  L  F  V  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0091J18.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="35170" PGL_stop="34502"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35170" e_stop="34502"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="35170" e_stop="34502" e_length="669"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35170" stop="34502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35157" stop="34889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586740" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTACTGGGAAATCCATCTCTATGTGGAAAAAAGTTTCTCAGTCCATGCCACATAAAAAGAAACCGAACAAGTTCTCATGGTTTTTCCAAGAAAACCTGGATCATACTTGCAGCACTTGGATCTGTTTTCAGTCTCATTCTTCTTGTCCTGGGAATATTTTTATTTCATCGGTACATGAAGAAGAAAAAAGTGAATGACACGGAGTTTACAAATCCAAAGTGTACCGCAGCACTGAGCCTCCAGAGATTTTATCAAAAGGATTTGGAACATGCTACCAATAATTTCCGTCCGGAAAACATTATTGGAGCCAGCAGTTTAAGTACTGTGTACAAAGGAACACTGGAAGATGGGAAGATTGTAGCAGTTAAGAAGCTGAATCACCAGTTCTCAGCAGAATCTGGTAAATGTTTTGATAGGGAAGTCAAGACTCTGAGCCAACTCAGACACAGGAACCTAGTTAAGGTGCTAGGTTACGCTTGGGAAAGCAAGAAGCTAAGGGCTTTAGTTTTAGAATACATGGAGAATGGGAACTTGGACAACATGATTTATGGTCAAGTAGAGGATGACTGGACGTTGTCCAACAGGATTGATATTTTAGTTTCAGTTGCAAGTGGACTATCATACCTGCATTCAGGCTATGATTTTCCAATAGTGCACTGTGACATGA</gDNA_template>
            <first_frame> I  Y  W  E  I  H  L  Y  V  E  K  S  F  S  V  H  A  T  *  K  E  T  E  Q  V  L  M  V  F  P  R  K  P  G  S  Y  L  Q  H  L  D  L  F  S  V  S  F  F  L  S  W  E  Y  F  Y  F  I  G  T  *  R  R  K  K  *  M  T  R  S  L  Q  I  Q  S  V  P  Q  H  *  A  S  R  D  F  I  K  R  I  W  N  M  L  P  I  I  S  V  R  K  T  L  L  E  P  A  V  *  V  L  C  T  K  E  H  W  K  M  G  R  L  *  Q  L  R  S  *  I  T  S  S  Q  Q  N  L  V  N  V  L  I  G  K  S  R  L  *  A  N  S  D  T  G  T  *  L  R  C  *  V  T  L  G  K  A  R  S  *  G  L  *  F  *  N  T  W  R  M  G  T  W  T  T  *  F  M  V  K  *  R  M  T  G  R  C  P  T  G  L  I  F  *  F  Q  L  Q  V  D  Y  H  T  C  I  Q  A  M  I  F  Q  *  C  T  V  T  * </first_frame>
            <second_frame>  F  T  G  K  S  I  S  M  W  K  K  V  S  Q  S  M  P  H  K  K  K  P  N  K  F  S  W  F  F  Q  E  N  L  D  H  T  C  S  T  W  I  C  F  Q  S  H  S  S  C  P  G  N  I  F  I  S  S  V  H  E  E  E  K  S  E  *  H  G  V  Y  K  S  K  V  Y  R  S  T  E  P  P  E  I  L  S  K  G  F  G  T  C  Y  Q  *  F  P  S  G  K  H  Y  W  S  Q  Q  F  K  Y  C  V  Q  R  N  T  G  R  W  E  D  C  S  S  *  E  A  E  S  P  V  L  S  R  I  W  *  M  F  *  *  G  S  Q  D  S  E  P  T  Q  T  Q  E  P  S  *  G  A  R  L  R  L  G  K  Q  E  A  K  G  F  S  F  R  I  H  G  E  W  E  L  G  Q  H  D  L  W  S  S  R  G  *  L  D  V  V  Q  Q  D  *  Y  F  S  F  S  C  K  W  T  I  I  P  A  F  R  L  *  F  S  N  S  A  L  *  H   </second_frame>
            <third_frame>   L  L  G  N  P  S  L  C  G  K  K  F  L  S  P  C  H  I  K  R  N  R  T  S  S  H  G  F  S  K  K  T  W  I  I  L  A  A  L  G  S  V  F  S  L  I  L  L  V  L  G  I  F  L  F  H  R  Y  M  K  K  K  K  V  N  D  T  E  F  T  N  P  K  C  T  A  A  L  S  L  Q  R  F  Y  Q  K  D  L  E  H  A  T  N  N  F  R  P  E  N  I  I  G  A  S  S  L  S  T  V  Y  K  G  T  L  E  D  G  K  I  V  A  V  K  K  L  N  H  Q  F  S  A  E  S  G  K  C  F  D  R  E  V  K  T  L  S  Q  L  R  H  R  N  L  V  K  V  L  G  Y  A  W  E  S  K  K  L  R  A  L  V  L  E  Y  M  E  N  G  N  L  D  N  M  I  Y  G  Q  V  E  D  D  W  T  L  S  N  R  I  D  I  L  V  S  V  A  S  G  L  S  Y  L  H  S  G  Y  D  F  P  I  V  H  C  D  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35168" stop="34503"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLGNPSLCGKKFLSPCHIKRNRTSSHGFSKKTWIILAALGSVFSLILLVLGIFLFHRYMKKKKVNDTEFTNPKCTAALSLQRFYQKDLEHATNNFRPENIIGASSLSTVYKGTLEDGKIVAVKKLNHQFSAESGKCFDREVKTLSQLRHRNLVKVLGYAWESKKLRALVLEYMENGNLDNMIYGQVEDDWTLSNRIDILVSVASGLSYLHSGYDFPIVHCDM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="37536" PGL_stop="36754"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37536" e_stop="36754"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="37536" e_stop="36754" e_length="783"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37536" stop="36754"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564585" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGTTTTTTCAGTGAGTGAAGTTTTCTTTCTTTTGAAATGATGATGTTAAAGACAGTTGTATATGCATTAGCCATATTTTCTATTACCTTTCTCATACCTTTGTCATCTGGGCAAAATCCAAGATTTGAAGTTGAAGTTGCTGCTTTGAAAGCTTTCAAGAGCTCAATCTCTGACGACCCTTTCAGTGCACTTGTGGATTGGACTGATGTAAATCACCATTGCAACTGGTCTGGAATCATATGTGATCCTTCTTCAAATCATGTCATCAACATTTCACTTATTGAGACACAGCTCAAAGGAGAAATTTCTCCGTTTCTAGGAAACCTCTCCAAACTCCAGGTTCTTGATCTAACTTTGAATTCATTTACTGGAAATATTCCACCCCAGCTGGGTCATTGCACGGACCTGGTTGAGCTCGTTTTTTACCAAAACTCTCTTTTTGGTGAAATTCCTGCCGAGCTGGGAAACCTAAAAAAACTGCAGTTAATAGATTTTGGAAATAACTTTCTAAATGGGAGTATACCTGATAGTATATGCAACTGCACTGAATTGTTGTTAGTAGGCTTCAACAACAACAATTTCACAGGCAAATTACCATCTGAAATTGGTAATTTGGCTAATCTTCAGTTGTTTGTAGCTTATACAAACAATTTGGTTGGTTTTATGCCTACCTCCATTGGAATGCTGACAGCTTTGCATACCCTTGATCTGAGCGAAAACCAGTTATCTGGACCTATACCACCAGAAATTGGCAACTTGTCAAGTTTAGGAATTCTTCAGTT</gDNA_template>
            <first_frame> K  F  F  Q  *  V  K  F  S  F  F  *  N  D  D  V  K  D  S  C  I  C  I  S  H  I  F  Y  Y  L  S  H  T  F  V  I  W  A  K  S  K  I  *  S  *  S  C  C  F  E  S  F  Q  E  L  N  L  *  R  P  F  Q  C  T  C  G  L  D  *  C  K  S  P  L  Q  L  V  W  N  H  M  *  S  F  F  K  S  C  H  Q  H  F  T  Y  *  D  T  A  Q  R  R  N  F  S  V  S  R  K  P  L  Q  T  P  G  S  *  S  N  F  E  F  I  Y  W  K  Y  S  T  P  A  G  S  L  H  G  P  G  *  A  R  F  L  P  K  L  S  F  W  *  N  S  C  R  A  G  K  P  K  K  T  A  V  N  R  F  W  K  *  L  S  K  W  E  Y  T  *  *  Y  M  Q  L  H  *  I  V  V  S  R  L  Q  Q  Q  Q  F  H  R  Q  I  T  I  *  N  W  *  F  G  *  S  S  V  V  C  S  L  Y  K  Q  F  G  W  F  Y  A  Y  L  H  W  N  A  D  S  F  A  Y  P  *  S  E  R  K  P  V  I  W  T  Y  T  T  R  N  W  Q  L  V  K  F  R  N  S  S  V </first_frame>
            <second_frame>  S  F  F  S  E  *  S  F  L  S  F  E  M  M  M  L  K  T  V  V  Y  A  L  A  I  F  S  I  T  F  L  I  P  L  S  S  G  Q  N  P  R  F  E  V  E  V  A  A  L  K  A  F  K  S  S  I  S  D  D  P  F  S  A  L  V  D  W  T  D  V  N  H  H  C  N  W  S  G  I  I  C  D  P  S  S  N  H  V  I  N  I  S  L  I  E  T  Q  L  K  G  E  I  S  P  F  L  G  N  L  S  K  L  Q  V  L  D  L  T  L  N  S  F  T  G  N  I  P  P  Q  L  G  H  C  T  D  L  V  E  L  V  F  Y  Q  N  S  L  F  G  E  I  P  A  E  L  G  N  L  K  K  L  Q  L  I  D  F  G  N  N  F  L  N  G  S  I  P  D  S  I  C  N  C  T  E  L  L  L  V  G  F  N  N  N  N  F  T  G  K  L  P  S  E  I  G  N  L  A  N  L  Q  L  F  V  A  Y  T  N  N  L  V  G  F  M  P  T  S  I  G  M  L  T  A  L  H  T  L  D  L  S  E  N  Q  L  S  G  P  I  P  P  E  I  G  N  L  S  S  L  G  I  L  Q   </second_frame>
            <third_frame>   V  F  S  V  S  E  V  F  F  L  L  K  *  *  C  *  R  Q  L  Y  M  H  *  P  Y  F  L  L  P  F  S  Y  L  C  H  L  G  K  I  Q  D  L  K  L  K  L  L  L  *  K  L  S  R  A  Q  S  L  T  T  L  S  V  H  L  W  I  G  L  M  *  I  T  I  A  T  G  L  E  S  Y  V  I  L  L  Q  I  M  S  S  T  F  H  L  L  R  H  S  S  K  E  K  F  L  R  F  *  E  T  S  P  N  S  R  F  L  I  *  L  *  I  H  L  L  E  I  F  H  P  S  W  V  I  A  R  T  W  L  S  S  F  F  T  K  T  L  F  L  V  K  F  L  P  S  W  E  T  *  K  N  C  S  *  *  I  L  E  I  T  F  *  M  G  V  Y  L  I  V  Y  A  T  A  L  N  C  C  *  *  A  S  T  T  T  I  S  Q  A  N  Y  H  L  K  L  V  I  W  L  I  F  S  C  L  *  L  I  Q  T  I  W  L  V  L  C  L  P  P  L  E  C  *  Q  L  C  I  P  L  I  *  A  K  T  S  Y  L  D  L  Y  H  Q  K  L  A  T  C  Q  V  *  E  F  F  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37517" stop="36756"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFLSFEMMMLKTVVYALAIFSITFLIPLSSGQNPRFEVEVAALKAFKSSISDDPFSALVDWTDVNHHCNWSGIICDPSSNHVINISLIETQLKGEISPFLGNLSKLQVLDLTLNSFTGNIPPQLGHCTDLVELVFYQNSLFGEIPAELGNLKKLQLIDFGNNFLNGSIPDSICNCTELLLVGFNNNNFTGKLPSEIGNLANLQLFVAYTNNLVGFMPTSIGMLTALHTLDLSENQLSGPIPPEIGNLSSLGILQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="47971" PGL_stop="44412"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47971" e_stop="47792"/>
            <exon e_start="47190" e_stop="47055"/>
            <exon e_start="46644" e_stop="46471"/>
            <exon e_start="45889" e_stop="45384"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.588" acc_prob="0.989" e_score="0.961"/>
          <exon-intron don_prob="0.802" acc_prob="0.941" e_score="0.993"/>
          <exon-intron don_prob="0.964" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="47971" e_stop="47792" e_length="180"/>
          </exon>
          <intron i_serial="1" don_prob="0.588" acc_prob="0.989">
            <gDNA_intron_boundary i_start="47791" i_stop="47191" i_length="601"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="47190" e_stop="47055" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.802" acc_prob="0.941">
            <gDNA_intron_boundary i_start="47054" i_stop="46645" i_length="410"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46644" e_stop="46471" e_length="174"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.996">
            <gDNA_intron_boundary i_start="46470" i_stop="45890" i_length="581"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="45889" e_stop="45384" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47971" stop="47792"/>
              <exon start="47190" stop="47055"/>
              <exon start="46644" stop="46471"/>
              <exon start="45889" stop="45384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567931" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGTAGTCCCCTCCCTACCCCTAACCCCTACCCCCTCTCTTCACTCGCATATCCCAATAACAAACCACGAGCTTCTGCTTCAACATTTGCATCTGACACTCACCTCTTCCCTCTCTAGAAAAAAAATTCAGAAAATCTAGTGAAGAAACAACAAAGATCTTTTTTTTTTTTTTCATTTGG : TGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTG : ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAG : GCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCA</gDNA_template>
            <first_frame> *  *  S  P  P  Y  P  *  P  L  P  P  L  F  T  R  I  S  Q  *  Q  T  T  S  F  C  F  N  I  C  I  *  H  S  P  L  P  S  L  E  K  K  F  R  K  S  S  E  E  T  T  K  I  F  F  F  F  F  I  W  :  W  L  G  L  K  T  I  I  Y  C  T  G  P  I  N  M  P  W  A  F  S  S  L  S  Y  C  V  K  C  V  R  F  V  V  F  F  R  V  I  L  *  P  I  L  L   : D  C  G  I  T  L  F  S  V  L  *  Y  F  L  I  L  V  Y  L  E  V  E  N  V  H  C  D  Y  L  E  E  I  Q  S  S  *  R  S  W  *  D  *  N  A  C  G  E  C  C  L  L  P  I  D  A  S  L  S   : G  *  V  L  P  S  V  A  *  T  C  N  V  V  C  *  S  V  S  F  G  E  V  G  I  A  Y  F  L  L  L  L  F  S  K  A  L  L  K  L  G  F  V  A  S  L  S  V  Y  T  K  S  E  *  P  H  *  A  L  N  V  V  T  V  D  W  N  C  Q  C  F  L  L  Q  L  I  H  L  E  H  Y  S  L  L  P  V  P  F  V  T  L  S  Y  F  N  F  *  N  I  P  S  G  K  H  F  S  S  P  V  Y  W  I  F  D  L  V  T  H  A  E  *  L  S  I  F  P  S  N  S  K  A  F  C  L  S  G  R  P  S  S  W  W  *  Y  I  *  Y  S  C  S  I  R  L  *  Y  N  G  T  S  Y  *  F  Q  I  F  C  A  L  S </first_frame>
            <second_frame>  S  S  P  L  P  T  P  N  P  Y  P  L  S  S  L  A  Y  P  N  N  K  P  R  A  S  A  S  T  F  A  S  D  T  H  L  F  P  L  *  K  K  N  S  E  N  L  V  K  K  Q  Q  R  S  F  F  F  F  S  F  G :   G  L  D  *  R  L  *  Y  T  A  L  D  Q  S  T  C  R  G  H  F  L  L  *  V  I  V  *  S  V  C  A  L  W  Y  S  F  V  *  F  C  N  P  F  Y  L  :  I  A  E  S  L  Y  F  L  S  C  D  I  S  *  Y  *  S  I  W  R  L  R  M  Y  I  A  I  T  L  K  R  Y  R  A  V  K  E  A  G  E  I  K  M  H  V  G  S  V  A  Y  Y  Q  L  M  L  V  C  Q  :  A  E  Y  F  R  Q  L  L  K  P  V  T  *  S  A  K  V  *  A  L  G  R  L  G  L  L  T  S  C  C  S  Y  S  A  K  P  C  *  S  W  D  L  L  L  L  F  Q  C  I  R  N  Q  N  D  L  I  K  H  *  M  W  L  L  L  I  G  I  V  S  A  F  Y  Y  N  *  Y  T  L  N  I  T  L  F  C  L  C  L  S  *  L  L  A  T  L  I  F  K  T  S  Q  V  E  N  T  F  L  V  Q  F  I  G  S  L  T  *  L  L  M  Q  N  N  Y  Q  F  S  P  Q  I  Q  K  P  F  V  S  L  E  D  Q  A  A  G  G  N  I  F  D  I  P  V  P  S  V  F  D  T  M  A  L  P  T  S  F  K  S  S  V  P  F   </second_frame>
            <third_frame>   V  V  P  S  L  P  L  T  P  T  P  S  L  H  S  H  I  P  I  T  N  H  E  L  L  L  Q  H  L  H  L  T  L  T  S  S  L  S  R  K  K  I  Q  K  I  *  *  R  N  N  K  D  L  F  F  F  F  H  L   : V  A  W  I  E  D  Y  N  I  L  H  W  T  N  Q  H  A  V  G  I  F  F  S  E  L  L  C  E  V  C  A  L  C  G  I  L  S  C  D  S  V  T  H  F  T  * :   L  R  N  H  F  I  F  C  L  V  I  F  L  D  T  S  L  F  G  G  *  E  C  T  L  R  L  P  *  R  D  T  E  Q  L  K  K  L  V  R  L  K  C  M  W  G  V  L  L  I  T  N  *  C  *  F  V  R :   L  S  T  S  V  S  C  L  N  L  *  R  S  L  L  K  C  K  L  W  G  G  W  D  C  L  L  L  V  A  L  I  Q  Q  S  L  V  E  V  G  I  C  C  F  S  F  S  V  Y  E  I  R  M  T  S  L  S  T  E  C  G  Y  C  *  L  E  L  S  V  L  F  T  T  T  N  T  P  *  T  L  L  S  F  A  C  A  F  R  N  S  *  L  L  *  F  L  K  H  P  K  W  K  T  L  F  *  S  S  L  L  D  L  *  L  S  Y  S  C  R  I  T  I  N  F  P  L  K  F  K  S  L  L  S  L  W  K  T  K  Q  L  V  V  I  Y  L  I  F  L  F  H  P  S  L  I  Q  W  H  F  L  L  V  S  N  L  L  C  P  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47875" stop="47792"/>
                    <exon start="47190" stop="47068"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSPLPSLEKKFRKSSEETTKIFFFFFIWWLGLKTIIYCTGPINMPWAFSSLSYCVKCVRFVVFFRVIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="47207" e_stop="47055"/>
            <exon e_start="46644" e_stop="44412"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.802" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47207" e_stop="47055" e_length="153"/>
          </exon>
          <intron i_serial="1" don_prob="0.802" acc_prob="0.941">
            <gDNA_intron_boundary i_start="47054" i_stop="46645" i_length="410"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="46644" e_stop="44412" e_length="2233"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47207" stop="47055"/>
              <exon start="46644" stop="44412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567930" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTGCTATTCTCGCAGTGGCTTGGATTGAAGACTATAATATACTGCACTGGACCAATCAACATGCCGTGGGCATTTTCTTCTCTGAGTTATTGTGTGAAGTGTGTGCGCTTTGTGGTATTCTTTCGTGTGATTCTGTAACCCATTTTACTTG : ATTGCGGAATCACTTTATTTTCTGTCTTGTGATATTTCTTGATACTAGTCTATTTGGAGGTTGAGAATGTACATTGCGATTACCTTGAAGAGATACAGAGCAGTTAAAGAAGCTGGTGAGATTAAAATGCATGTGGGGAGTGTTGCTTATTACCAATTGATGCTAGTTTGTCAGGTAAATATTCTTTTAGCTTTTGGTCCTGTCTTTTTGATTAAATTGCACTGAATCCAACCAAACTCGTACAGTCTAAAGGAAATAGAGACAAATCAACTAGAACTTAATTGAATATTGTATGGGAGGATTCTTTTTTGTGTTTCAGTCTTCTGTTTATGTTCTGACTGGTATTTTGTGCCAGGTGCATGATCTTCTACTGACAGTCTTATTAAGACTTGGCTTAAACCACTATGAAAATGTTGAACACTATTCCTCTTTCTATCAATATTGACTTTATCACTGAGGTTGAGTACAGAAAATTGTTTATCCTCAGTGTAGTGTACTGCTATATAGTTTCCATAGGCATCTTGATATCCATACAGATAACCGCGTCTGTATTGAAATATAACTTTTGTATGCCTTCTGTATAATGCTCATCTTACCAAGTGTATGGTGGTTCCGTTCAACCTCAAGACAATGAGAATAGTTGGGATTATTTTCTAGGCATATTGTTTCCTTGTTTTAATATTTTTCTTATCTTGCATTTGTTCTGAATGTATGACAACCCAATGATATGGTTCTTTGGTTCTTGCTTTTTACAGGCTGAGTACTTCCGTCAGTTGCTTAAACCTGTAACGTAGTCTGCTAAAGTGTAAGCTTTGGGGAGGTTGGGATTGCTTACTTCTTGTTGCTCTTATTCAGCAAAGCCTTGTTGAAGTTGGGATTTGTTGCTTCTCTTTCAGTGTATACGAAATCAGAATGACCTCATTAAGCACTGAATGTGGTTACTGTTGATTGGAATTGTCAGTGCTTTTTACTACAACTAATACACCTTGAACATTACTCTCTTTTGCCTGTGCCTTTCGTAACTCTTAGCTACTTTAATTTTTAAAACATCCCAAGTGGAAAACACTTTTCTAGTCCAGTTTATTGGATCTTTGACTTAGTTACTCATGCAGAATAACTATCAATTTTCCCCTCAAATTCAAAAGCCTTTTGTCTCTCTGGAAGACCAAGCAGCTGGTGGTAATATATTTGATATTCCTGTTCCATCCGTCTTTGATACAATGGCACTTCCTACTAGTTTCAAATCTTCTGTGCCCTTTCATGGTTTTGAATTTCGGTCCTCTGAGGCATGTCCAAAGAATTTCATCATCTTTGATCAGACTGATTACCGGAGCCAGATCATGTACCACCCTGCCATGACCTCCAAATTCCCATATCCTGATCTGAATTATAATTCAACTTGCTTCCACGACTGCATGGAGAGAAAAATTGCAAACAATGAGAATACAGAAGTTTCTTCATATCTGAAGGAAGATTCAGATGATATAAATGCATTGCTCAGCTTGGAAGAGGAAGAATGTGAGGAATATGATGAAGAAGAGGTGAGCACTGCACGCACTGATGCAAACTATGGATGCAGTTCCCCTGAATCATACTCAAACTATCATTGTCAATCCAAAAAGAGCAGGACCTCTTCTTTCAGGGAATCCTCTGGTAGCAGTACTAGCAATTGCAGTGAGAGAAAACGCAGGAAACTTAAGAAGATGGTCAAGGCATTAAAGGGAATCGTCCCTGGTGCCAGCAGGATGAATACTGTCACCGTTCTTGATGAAGCTGTCAGATACCTCAAGTCACTTAAGGTGGAAGTGCAGAAGCTTGGAGTCGATAATCTGAAGACATATGCCTGATATCCTTTGTGGTATAGGTAATTTCGCTTCCTTTATCACCGTCACATGATTATGAACCCTAGTCATATCTTTTGCTTATGTGAAGAAGAACTACTTATACCGTCGTATTGCTGAGTTGCTGCTCTGGAGGGGGTAACGTAACGTAGAATATGGTCCTTTGTCCAGCGATAGGACAATAAGTCTGCTGTAGTAGCTAGCTGCTATATCTAATTTCTCATTCTAGCATATAGTATGTTTCCACTAGTTGCAAACTCTATTAAGGCATTTGAATAATTTCTCCAATATGTGACACTCTTTCACCTATTGGAGCTGCTATTTGTTATTGTTGTTGTATGACTTTGATGATTTGTTTTAATGGATAATGGGTTGATGATTACACTTTATGC</gDNA_template>
            <first_frame> F  C  Y  S  R  S  G  L  D  *  R  L  *  Y  T  A  L  D  Q  S  T  C  R  G  H  F  L  L  *  V  I  V  *  S  V  C  A  L  W  Y  S  F  V  *  F  C  N  P  F  Y  L  :  I  A  E  S  L  Y  F  L  S  C  D  I  S  *  Y  *  S  I  W  R  L  R  M  Y  I  A  I  T  L  K  R  Y  R  A  V  K  E  A  G  E  I  K  M  H  V  G  S  V  A  Y  Y  Q  L  M  L  V  C  Q  V  N  I  L  L  A  F  G  P  V  F  L  I  K  L  H  *  I  Q  P  N  S  Y  S  L  K  E  I  E  T  N  Q  L  E  L  N  *  I  L  Y  G  R  I  L  F  C  V  S  V  F  C  L  C  S  D  W  Y  F  V  P  G  A  *  S  S  T  D  S  L  I  K  T  W  L  K  P  L  *  K  C  *  T  L  F  L  F  L  S  I  L  T  L  S  L  R  L  S  T  E  N  C  L  S  S  V  *  C  T  A  I  *  F  P  *  A  S  *  Y  P  Y  R  *  P  R  L  Y  *  N  I  T  F  V  C  L  L  Y  N  A  H  L  T  K  C  M  V  V  P  F  N  L  K  T  M  R  I  V  G  I  I  F  *  A  Y  C  F  L  V  L  I  F  F  L  S  C  I  C  S  E  C  M  T  T  Q  *  Y  G  S  L  V  L  A  F  Y  R  L  S  T  S  V  S  C  L  N  L  *  R  S  L  L  K  C  K  L  W  G  G  W  D  C  L  L  L  V  A  L  I  Q  Q  S  L  V  E  V  G  I  C  C  F  S  F  S  V  Y  E  I  R  M  T  S  L  S  T  E  C  G  Y  C  *  L  E  L  S  V  L  F  T  T  T  N  T  P  *  T  L  L  S  F  A  C  A  F  R  N  S  *  L  L  *  F  L  K  H  P  K  W  K  T  L  F  *  S  S  L  L  D  L  *  L  S  Y  S  C  R  I  T  I  N  F  P  L  K  F  K  S  L  L  S  L  W  K  T  K  Q  L  V  V  I  Y  L  I  F  L  F  H  P  S  L  I  Q  W  H  F  L  L  V  S  N  L  L  C  P  F  M  V  L  N  F  G  P  L  R  H  V  Q  R  I  S  S  S  L  I  R  L  I  T  G  A  R  S  C  T  T  L  P  *  P  P  N  S  H  I  L  I  *  I  I  I  Q  L  A  S  T  T  A  W  R  E  K  L  Q  T  M  R  I  Q  K  F  L  H  I  *  R  K  I  Q  M  I  *  M  H  C  S  A  W  K  R  K  N  V  R  N  M  M  K  K  R  *  A  L  H  A  L  M  Q  T  M  D  A  V  P  L  N  H  T  Q  T  I  I  V  N  P  K  R  A  G  P  L  L  S  G  N  P  L  V  A  V  L  A  I  A  V  R  E  N  A  G  N  L  R  R  W  S  R  H  *  R  E  S  S  L  V  P  A  G  *  I  L  S  P  F  L  M  K  L  S  D  T  S  S  H  L  R  W  K  C  R  S  L  E  S  I  I  *  R  H  M  P  D  I  L  C  G  I  G  N  F  A  S  F  I  T  V  T  *  L  *  T  L  V  I  S  F  A  Y  V  K  K  N  Y  L  Y  R  R  I  A  E  L  L  L  W  R  G  *  R  N  V  E  Y  G  P  L  S  S  D  R  T  I  S  L  L  *  *  L  A  A  I  S  N  F  S  F  *  H  I  V  C  F  H  *  L  Q  T  L  L  R  H  L  N  N  F  S  N  M  *  H  S  F  T  Y  W  S  C  Y  L  L  L  L  L  Y  D  F  D  D  L  F  *  W  I  M  G  *  *  L  H  F  M  </first_frame>
            <second_frame>  F  A  I  L  A  V  A  W  I  E  D  Y  N  I  L  H  W  T  N  Q  H  A  V  G  I  F  F  S  E  L  L  C  E  V  C  A  L  C  G  I  L  S  C  D  S  V  T  H  F  T  * :   L  R  N  H  F  I  F  C  L  V  I  F  L  D  T  S  L  F  G  G  *  E  C  T  L  R  L  P  *  R  D  T  E  Q  L  K  K  L  V  R  L  K  C  M  W  G  V  L  L  I  T  N  *  C  *  F  V  R  *  I  F  F  *  L  L  V  L  S  F  *  L  N  C  T  E  S  N  Q  T  R  T  V  *  R  K  *  R  Q  I  N  *  N  L  I  E  Y  C  M  G  G  F  F  F  V  F  Q  S  S  V  Y  V  L  T  G  I  L  C  Q  V  H  D  L  L  L  T  V  L  L  R  L  G  L  N  H  Y  E  N  V  E  H  Y  S  S  F  Y  Q  Y  *  L  Y  H  *  G  *  V  Q  K  I  V  Y  P  Q  C  S  V  L  L  Y  S  F  H  R  H  L  D  I  H  T  D  N  R  V  C  I  E  I  *  L  L  Y  A  F  C  I  M  L  I  L  P  S  V  W  W  F  R  S  T  S  R  Q  *  E  *  L  G  L  F  S  R  H  I  V  S  L  F  *  Y  F  S  Y  L  A  F  V  L  N  V  *  Q  P  N  D  M  V  L  W  F  L  L  F  T  G  *  V  L  P  S  V  A  *  T  C  N  V  V  C  *  S  V  S  F  G  E  V  G  I  A  Y  F  L  L  L  L  F  S  K  A  L  L  K  L  G  F  V  A  S  L  S  V  Y  T  K  S  E  *  P  H  *  A  L  N  V  V  T  V  D  W  N  C  Q  C  F  L  L  Q  L  I  H  L  E  H  Y  S  L  L  P  V  P  F  V  T  L  S  Y  F  N  F  *  N  I  P  S  G  K  H  F  S  S  P  V  Y  W  I  F  D  L  V  T  H  A  E  *  L  S  I  F  P  S  N  S  K  A  F  C  L  S  G  R  P  S  S  W  W  *  Y  I  *  Y  S  C  S  I  R  L  *  Y  N  G  T  S  Y  *  F  Q  I  F  C  A  L  S  W  F  *  I  S  V  L  *  G  M  S  K  E  F  H  H  L  *  S  D  *  L  P  E  P  D  H  V  P  P  C  H  D  L  Q  I  P  I  S  *  S  E  L  *  F  N  L  L  P  R  L  H  G  E  K  N  C  K  Q  *  E  Y  R  S  F  F  I  S  E  G  R  F  R  *  Y  K  C  I  A  Q  L  G  R  G  R  M  *  G  I  *  *  R  R  G  E  H  C  T  H  *  C  K  L  W  M  Q  F  P  *  I  I  L  K  L  S  L  S  I  Q  K  E  Q  D  L  F  F  Q  G  I  L  W  *  Q  Y  *  Q  L  Q  *  E  K  T  Q  E  T  *  E  D  G  Q  G  I  K  G  N  R  P  W  C  Q  Q  D  E  Y  C  H  R  S  *  *  S  C  Q  I  P  Q  V  T  *  G  G  S  A  E  A  W  S  R  *  S  E  D  I  C  L  I  S  F  V  V  *  V  I  S  L  P  L  S  P  S  H  D  Y  E  P  *  S  Y  L  L  L  M  *  R  R  T  T  Y  T  V  V  L  L  S  C  C  S  G  G  G  N  V  T  *  N  M  V  L  C  P  A  I  G  Q  *  V  C  C  S  S  *  L  L  Y  L  I  S  H  S  S  I  *  Y  V  S  T  S  C  K  L  Y  *  G  I  *  I  I  S  P  I  C  D  T  L  S  P  I  G  A  A  I  C  Y  C  C  C  M  T  L  M  I  C  F  N  G  *  W  V  D  D  Y  T  L  C </second_frame>
            <third_frame>   L  L  F  S  Q  W  L  G  L  K  T  I  I  Y  C  T  G  P  I  N  M  P  W  A  F  S  S  L  S  Y  C  V  K  C  V  R  F  V  V  F  F  R  V  I  L  *  P  I  L  L   : D  C  G  I  T  L  F  S  V  L  *  Y  F  L  I  L  V  Y  L  E  V  E  N  V  H  C  D  Y  L  E  E  I  Q  S  S  *  R  S  W  *  D  *  N  A  C  G  E  C  C  L  L  P  I  D  A  S  L  S  G  K  Y  S  F  S  F  W  S  C  L  F  D  *  I  A  L  N  P  T  K  L  V  Q  S  K  G  N  R  D  K  S  T  R  T  *  L  N  I  V  W  E  D  S  F  L  C  F  S  L  L  F  M  F  *  L  V  F  C  A  R  C  M  I  F  Y  *  Q  S  Y  *  D  L  A  *  T  T  M  K  M  L  N  T  I  P  L  S  I  N  I  D  F  I  T  E  V  E  Y  R  K  L  F  I  L  S  V  V  Y  C  Y  I  V  S  I  G  I  L  I  S  I  Q  I  T  A  S  V  L  K  Y  N  F  C  M  P  S  V  *  C  S  S  Y  Q  V  Y  G  G  S  V  Q  P  Q  D  N  E  N  S  W  D  Y  F  L  G  I  L  F  P  C  F  N  I  F  L  I  L  H  L  F  *  M  Y  D  N  P  M  I  W  F  F  G  S  C  F  L  Q  A  E  Y  F  R  Q  L  L  K  P  V  T  *  S  A  K  V  *  A  L  G  R  L  G  L  L  T  S  C  C  S  Y  S  A  K  P  C  *  S  W  D  L  L  L  L  F  Q  C  I  R  N  Q  N  D  L  I  K  H  *  M  W  L  L  L  I  G  I  V  S  A  F  Y  Y  N  *  Y  T  L  N  I  T  L  F  C  L  C  L  S  *  L  L  A  T  L  I  F  K  T  S  Q  V  E  N  T  F  L  V  Q  F  I  G  S  L  T  *  L  L  M  Q  N  N  Y  Q  F  S  P  Q  I  Q  K  P  F  V  S  L  E  D  Q  A  A  G  G  N  I  F  D  I  P  V  P  S  V  F  D  T  M  A  L  P  T  S  F  K  S  S  V  P  F  H  G  F  E  F  R  S  S  E  A  C  P  K  N  F  I  I  F  D  Q  T  D  Y  R  S  Q  I  M  Y  H  P  A  M  T  S  K  F  P  Y  P  D  L  N  Y  N  S  T  C  F  H  D  C  M  E  R  K  I  A  N  N  E  N  T  E  V  S  S  Y  L  K  E  D  S  D  D  I  N  A  L  L  S  L  E  E  E  E  C  E  E  Y  D  E  E  E  V  S  T  A  R  T  D  A  N  Y  G  C  S  S  P  E  S  Y  S  N  Y  H  C  Q  S  K  K  S  R  T  S  S  F  R  E  S  S  G  S  S  T  S  N  C  S  E  R  K  R  R  K  L  K  K  M  V  K  A  L  K  G  I  V  P  G  A  S  R  M  N  T  V  T  V  L  D  E  A  V  R  Y  L  K  S  L  K  V  E  V  Q  K  L  G  V  D  N  L  K  T  Y  A  *  Y  P  L  W  Y  R  *  F  R  F  L  Y  H  R  H  M  I  M  N  P  S  H  I  F  C  L  C  E  E  E  L  L  I  P  S  Y  C  *  V  A  A  L  E  G  V  T  *  R  R  I  W  S  F  V  Q  R  *  D  N  K  S  A  V  V  A  S  C  Y  I  *  F  L  I  L  A  Y  S  M  F  P  L  V  A  N  S  I  K  A  F  E  *  F  L  Q  Y  V  T  L  F  H  L  L  E  L  L  F  V  I  V  V  V  *  L  *  *  F  V  L  M  D  N  G  L  M  I  T  L  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45544" stop="44798"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLMQNNYQFSPQIQKPFVSLEDQAAGGNIFDIPVPSVFDTMALPTSFKSSVPFHGFEFRSSEACPKNFIIFDQTDYRSQIMYHPAMTSKFPYPDLNYNSTCFHDCMERKIANNENTEVSSYLKEDSDDINALLSLEEEECEEYDEEEVSTARTDANYGCSSPESYSNYHCQSKKSRTSSFRESSGSSTSNCSERKRRKLKKMVKALKGIVPGASRMNTVTVLDEAVRYLKSLKVEVQKLGVDNLKTYA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="54408" PGL_stop="57508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54408" e_stop="54783"/>
            <exon e_start="54898" e_stop="55122"/>
            <exon e_start="55297" e_stop="55407"/>
            <exon e_start="56131" e_stop="56192"/>
            <exon e_start="57000" e_stop="57508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.819" acc_prob="0.995" e_score="0.992"/>
          <exon-intron don_prob="0.845" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.798" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="54408" e_stop="54783" e_length="376"/>
          </exon>
          <intron i_serial="1" don_prob="0.819" acc_prob="0.995">
            <gDNA_intron_boundary i_start="54784" i_stop="54897" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54898" e_stop="55122" e_length="225"/>
          </exon>
          <intron i_serial="2" don_prob="0.845" acc_prob="0.998">
            <gDNA_intron_boundary i_start="55123" i_stop="55296" i_length="174"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55297" e_stop="55407" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.865" acc_prob="0.976">
            <gDNA_intron_boundary i_start="55408" i_stop="56130" i_length="723"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="56131" e_stop="56192" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.944" acc_prob="0.798">
            <gDNA_intron_boundary i_start="56193" i_stop="56999" i_length="807"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="57000" e_stop="57508" e_length="509"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54408" stop="54783"/>
              <exon start="54898" stop="55122"/>
              <exon start="55297" stop="55407"/>
              <exon start="56131" stop="56192"/>
              <exon start="57000" stop="57508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54497" stop="54783"/>
              <exon start="54898" stop="55004"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595923" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAACTTAAGGGACTATTGTAGAAAATATTTTTCTCAACTTTCTCTACACCGGAGAATGCACAATTAGACCACCAAATTCCGGGCTGTGTTCGCTGTGCGTCAATCGGAGATTGCACAATTAAATAGCGGGGGCCGTGTTCGCCGTCGAGTAGAGGTCTGGGTTACTGTGGTACTCTTTCGCCTGATTCTGTCATCCATTTTAATTGGTGAGATAGCCTCTTTAGGGTTGAGATGCAGATTGACTAATAATGGGTCTGAAAAATCTGAAGCAATTGACGCCTTTTATCAAAGAAGCATTTCAGCAAACATTACTCGTAGCCAAATTCCTCTGTGGTATTCATGTGGTCAACAGCTATATCTGCACCTTAGCTCTC : ACTCAAGGTCCAAGCATGCTTCCAACGTTTAGTCTGACTGGAGATCTTGTTTTGGCTGAAAGGCTATCAACTCGGTTTGAGAAAATGCAACGTGGAGATGTAGTGCTAGTGCGTAGCCCTGAGAACCCGAGAAAAATTGTGATCAAAAGAATCATGGGCATGGGTAGTGATACTGTTAGATATGTTGTGGATCATGCAAATAATGGAATAGAACATACTATTGTG : GTACCAGATGGACATGTTTGGATTGAAGGGGATAACAAATTCAATACCAACGATTCGAGGAACTTTGGACCTGTACCTTATGGACTTGTACAGGGCAGAGTCTTTTGGCTT : GTATGGCCTCCTGAAAATTTTGGATCAGTAGGAAGAGAAGTACAGTAAATCAACCTTTCAAG : ATTTGGAGTATGCTTGTAGAGTATTCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAGATGGCAACTGGTGGGTTGCTTTACTACTTTGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTTAAATATATTCGGTTAATGTATTTCTCTAGCTCCAAAGGGTGCACGGTTTTGCATAATTTGCTCTTGAAGTGCCACTGCTAATGCATTAGCTCGAAGGCTTCTTTTTCTATTTTACTTTGTCGTTGTTCTTCTTTCAAAAGAGTCGTTTGGACTAATGGGATTTGGCAGTCACTTCTCGTATAAACTTGAGCCTTTGTAGTCAGTGTTACCGCTGGGAAGTTACATGTACCTGGTCTCTAAGGTGCAGGCAAGCTTTGCCAAAACACAGCACTACATTTTAATTCTCATTTTTCTGATAGTTACATGTTCCTTTAAATAATACAGTAGTAAATTTTTTAATTTTAATTAACTGATGTATATATCCAAAAGCTAGGAGTTAAGCTAG</gDNA_template>
            <first_frame> S  N  L  R  D  Y  C  R  K  Y  F  S  Q  L  S  L  H  R  R  M  H  N  *  T  T  K  F  R  A  V  F  A  V  R  Q  S  E  I  A  Q  L  N  S  G  G  R  V  R  R  R  V  E  V  W  V  T  V  V  L  F  R  L  I  L  S  S  I  L  I  G  E  I  A  S  L  G  L  R  C  R  L  T  N  N  G  S  E  K  S  E  A  I  D  A  F  Y  Q  R  S  I  S  A  N  I  T  R  S  Q  I  P  L  W  Y  S  C  G  Q  Q  L  Y  L  H  L  S  S   : H  S  R  S  K  H  A  S  N  V  *  S  D  W  R  S  C  F  G  *  K  A  I  N  S  V  *  E  N  A  T  W  R  C  S  A  S  A  *  P  *  E  P  E  K  N  C  D  Q  K  N  H  G  H  G  *  *  Y  C  *  I  C  C  G  S  C  K  *  W  N  R  T  Y  Y  C   : G  T  R  W  T  C  L  D  *  R  G  *  Q  I  Q  Y  Q  R  F  E  E  L  W  T  C  T  L  W  T  C  T  G  Q  S  L  L  A   : C  M  A  S  *  K  F  W  I  S  R  K  R  S  T  V  N  Q  P  F  K  :  I  W  S  M  L  V  E  Y  S  L  T  S  L  D  F  K  Q  F  T  E  D  G  N  W  W  V  A  L  L  L  C  S  R  W  K  T  G  R  K  S  C  *  I  Y  S  V  N  V  F  L  *  L  Q  R  V  H  G  F  A  *  F  A  L  E  V  P  L  L  M  H  *  L  E  G  F  F  F  Y  F  T  L  S  L  F  F  F  Q  K  S  R  L  D  *  W  D  L  A  V  T  S  R  I  N  L  S  L  C  S  Q  C  Y  R  W  E  V  T  C  T  W  S  L  R  C  R  Q  A  L  P  K  H  S  T  T  F  *  F  S  F  F  *  *  L  H  V  P  L  N  N  T  V  V  N  F  L  I  L  I  N  *  C  I  Y  P  K  A  R  S  *  A   </first_frame>
            <second_frame>  Q  T  *  G  T  I  V  E  N  I  F  L  N  F  L  Y  T  G  E  C  T  I  R  P  P  N  S  G  L  C  S  L  C  V  N  R  R  L  H  N  *  I  A  G  A  V  F  A  V  E  *  R  S  G  L  L  W  Y  S  F  A  *  F  C  H  P  F  *  L  V  R  *  P  L  *  G  *  D  A  D  *  L  I  M  G  L  K  N  L  K  Q  L  T  P  F  I  K  E  A  F  Q  Q  T  L  L  V  A  K  F  L  C  G  I  H  V  V  N  S  Y  I  C  T  L  A  L  :  T  Q  G  P  S  M  L  P  T  F  S  L  T  G  D  L  V  L  A  E  R  L  S  T  R  F  E  K  M  Q  R  G  D  V  V  L  V  R  S  P  E  N  P  R  K  I  V  I  K  R  I  M  G  M  G  S  D  T  V  R  Y  V  V  D  H  A  N  N  G  I  E  H  T  I  V  :  V  P  D  G  H  V  W  I  E  G  D  N  K  F  N  T  N  D  S  R  N  F  G  P  V  P  Y  G  L  V  Q  G  R  V  F  W  L  :  V  W  P  P  E  N  F  G  S  V  G  R  E  V  Q  *  I  N  L  S  R :   F  G  V  C  L  *  S  I  L  S  Q  A  W  I  L  N  N  L  L  K  M  A  T  G  G  L  L  Y  Y  F  V  R  G  G  R  Q  D  A  R  A  V  K  Y  I  R  L  M  Y  F  S  S  S  K  G  C  T  V  L  H  N  L  L  L  K  C  H  C  *  C  I  S  S  K  A  S  F  S  I  L  L  C  R  C  S  S  F  K  R  V  V  W  T  N  G  I  W  Q  S  L  L  V  *  T  *  A  F  V  V  S  V  T  A  G  K  L  H  V  P  G  L  *  G  A  G  K  L  C  Q  N  T  A  L  H  F  N  S  H  F  S  D  S  Y  M  F  L  *  I  I  Q  *  *  I  F  *  F  *  L  T  D  V  Y  I  Q  K  L  G  V  K  L  </second_frame>
            <third_frame>   K  L  K  G  L  L  *  K  I  F  F  S  T  F  S  T  P  E  N  A  Q  L  D  H  Q  I  P  G  C  V  R  C  A  S  I  G  D  C  T  I  K  *  R  G  P  C  S  P  S  S  R  G  L  G  Y  C  G  T  L  S  P  D  S  V  I  H  F  N  W  *  D  S  L  F  R  V  E  M  Q  I  D  *  *  W  V  *  K  I  *  S  N  *  R  L  L  S  K  K  H  F  S  K  H  Y  S  *  P  N  S  S  V  V  F  M  W  S  T  A  I  S  A  P  *  L  S :   L  K  V  Q  A  C  F  Q  R  L  V  *  L  E  I  L  F  W  L  K  G  Y  Q  L  G  L  R  K  C  N  V  E  M  *  C  *  C  V  A  L  R  T  R  E  K  L  *  S  K  E  S  W  A  W  V  V  I  L  L  D  M  L  W  I  M  Q  I  M  E  *  N  I  L  L  W :   Y  Q  M  D  M  F  G  L  K  G  I  T  N  S  I  P  T  I  R  G  T  L  D  L  Y  L  M  D  L  Y  R  A  E  S  F  G  L :   Y  G  L  L  K  I  L  D  Q  *  E  E  K  Y  S  K  S  T  F  Q   : D  L  E  Y  A  C  R  V  F  S  H  K  P  G  F  *  T  I  Y  *  R  W  Q  L  V  G  C  F  T  T  L  F  E  V  E  D  R  T  Q  E  L  L  N  I  F  G  *  C  I  S  L  A  P  K  G  A  R  F  C  I  I  C  S  *  S  A  T  A  N  A  L  A  R  R  L  L  F  L  F  Y  F  V  V  V  L  L  S  K  E  S  F  G  L  M  G  F  G  S  H  F  S  Y  K  L  E  P  L  *  S  V  L  P  L  G  S  Y  M  Y  L  V  S  K  V  Q  A  S  F  A  K  T  Q  H  Y  I  L  I  L  I  F  L  I  V  T  C  S  F  K  *  Y  S  S  K  F  F  N  F  N  *  L  M  Y  I  S  K  S  *  E  L  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54652" stop="54783"/>
                    <exon start="54898" stop="55122"/>
                    <exon start="55297" stop="55407"/>
                    <exon start="56131" stop="56178"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIMGLKNLKQLTPFIKEAFQQTLLVAKFLCGIHVVNSYICTLALTQGPSMLPTFSLTGDLVLAERLSTRFEKMQRGDVVLVRSPENPRKIVIKRIMGMGSDTVRYVVDHANNGIEHTIVVPDGHVWIEGDNKFNTNDSRNFGPVPYGLVQGRVFWLVWPPENFGSVGREVQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="58730" PGL_stop="57798"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58730" e_stop="58558"/>
            <exon e_start="58091" e_stop="57798"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.953" e_score="0.988"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="58730" e_stop="58558" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.953">
            <gDNA_intron_boundary i_start="58557" i_stop="58092" i_length="466"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="58091" e_stop="57798" e_length="294"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58730" stop="58558"/>
              <exon start="58091" stop="57798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595196" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTCCAGGTTCTTCTATACCTTCAGCATTTGTGCTATGGGTGATGAGAGAACTACCACCTCCACTTGTCACTTTCAGTCAACAGGAGTCGAGGACAATAGCTTTTATAAATGACAGTTCAGCGACAGTACAGCCTCAGCGATGGACAGCTGCTGCAAGTGTGCAAAATCAG : GTCTCAAGGGCGAGCCCCATATGATCACCGTGATGGAATTTGTAAATTGATTGGTGATTTTCAGCTAGAGTGAAGGACTGACAATACTAAAAATGAAAGAACTTCTCAGTTGAGTGGTCGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGATAAAAAATACCCCTTGCAACTAAGTAAGGTGGTTGCTCAGGGTACACATGCCTGCATAACTTGGATTCTTGTACATAGCAATGAACTTTCTAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAG</gDNA_template>
            <first_frame> I  F  Q  V  L  L  Y  L  Q  H  L  C  Y  G  *  *  E  N  Y  H  L  H  L  S  L  S  V  N  R  S  R  G  Q  *  L  L  *  M  T  V  Q  R  Q  Y  S  L  S  D  G  Q  L  L  Q  V  C  K  I  R :   S  Q  G  R  A  P  Y  D  H  R  D  G  I  C  K  L  I  G  D  F  Q  L  E  *  R  T  D  N  T  K  N  E  R  T  S  Q  L  S  G  R  C  C  G  *  V  I  E  E  S  S  T  Q  R  I  K  N  T  P  C  N  *  V  R  W  L  L  R  V  H  M  P  A  *  L  G  F  L  Y  I  A  M  N  F  L  N  F  T  D  S  F  L  L  I  *  *  G  F   </first_frame>
            <second_frame>  F  S  R  F  F  Y  T  F  S  I  C  A  M  G  D  E  R  T  T  T  S  T  C  H  F  Q  S  T  G  V  E  D  N  S  F  Y  K  *  Q  F  S  D  S  T  A  S  A  M  D  S  C  C  K  C  A  K  S   : G  L  K  G  E  P  H  M  I  T  V  M  E  F  V  N  *  L  V  I  F  S  *  S  E  G  L  T  I  L  K  M  K  E  L  L  S  *  V  V  G  V  V  V  E  *  S  K  K  A  Q  L  N  G  *  K  I  P  L  A  T  K  *  G  G  C  S  G  Y  T  C  L  H  N  L  D  S  C  T  *  Q  *  T  F  *  I  L  Q  I  L  F  C  *  Y  N  E  V  L  </second_frame>
            <third_frame>   F  P  G  S  S  I  P  S  A  F  V  L  W  V  M  R  E  L  P  P  P  L  V  T  F  S  Q  Q  E  S  R  T  I  A  F  I  N  D  S  S  A  T  V  Q  P  Q  R  W  T  A  A  A  S  V  Q  N  Q  :  V  S  R  A  S  P  I  *  S  P  *  W  N  L  *  I  D  W  *  F  S  A  R  V  K  D  *  Q  Y  *  K  *  K  N  F  S  V  E  W  S  V  L  W  L  S  D  R  R  K  L  N  S  T  D  K  K  Y  P  L  Q  L  S  K  V  V  A  Q  G  T  H  A  C  I  T  W  I  L  V  H  S  N  E  L  S  K  F  Y  R  F  F  F  V  D  I  M  R  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57995" stop="57798"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNFSVEWSVLWLSDRRKLNSTDKKYPLQLSKVVAQGTHACITWILVHSNELSKFYRFFFVDIMRF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58728" stop="58558"/>
                    <exon start="58091" stop="58068"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FPGSSIPSAFVLWVMRELPPPLVTFSQQESRTIAFINDSSATVQPQRWTAAASVQNQVSRASPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="71774" PGL_stop="60010"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71774" e_stop="71354"/>
            <exon e_start="67299" e_stop="67249"/>
            <exon e_start="65175" e_stop="65142"/>
            <exon e_start="63509" e_stop="63423"/>
            <exon e_start="63351" e_stop="63300"/>
            <exon e_start="62102" e_stop="61934"/>
            <exon e_start="61347" e_stop="61296"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="0.971"/>
          <exon-intron don_prob="0.990" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.541" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.568" e_score="0.989"/>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.812" acc_prob="0.814" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="71774" e_stop="71354" e_length="421"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="71353" i_stop="67300" i_length="4054"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67299" e_stop="67249" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.967">
            <gDNA_intron_boundary i_start="67248" i_stop="65176" i_length="2073"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65175" e_stop="65142" e_length="34"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.541">
            <gDNA_intron_boundary i_start="65141" i_stop="63510" i_length="1632"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="63509" e_stop="63423" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.873" acc_prob="0.568">
            <gDNA_intron_boundary i_start="63422" i_stop="63352" i_length="71"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="63351" e_stop="63300" e_length="52"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="63299" i_stop="62103" i_length="1197"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62102" e_stop="61934" e_length="169"/>
          </exon>
          <intron i_serial="6" don_prob="0.812" acc_prob="0.814">
            <gDNA_intron_boundary i_start="61933" i_stop="61348" i_length="586"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="61347" e_stop="61296" e_length="52"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71774" stop="71354"/>
              <exon start="67299" stop="67249"/>
              <exon start="65175" stop="65142"/>
              <exon start="63509" stop="63423"/>
              <exon start="63351" stop="63300"/>
              <exon start="62102" stop="61934"/>
              <exon start="61347" stop="61296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584094" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAATTCAAAGAAAAAGATACCATCGAGGCTGCATAAAGAGAAAAAAAAGTAAGGGGAATTAGGAGAGTATCGTTTTGGATACCATTTCATTTTCTTTTTTACTTACTTCAAGACTTGTTTGTTGTAAGTGTTTTGGGTACATATATATACATATATACATATATATATATATATATATATATATATATATATATATAAGCTTATCATCATATTGTGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG : TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA : GTATTTCACTTGATGATTGGATCTTCAAATTTGG : GTTATTTCCTTTATTTTATTTTGACAATTGTTGCCGCATGTAATGGTTGGATTTTCTGGTCGCACTCCTGTGGCTTTGTCGTTATGG : CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG : GGTTGATCTTTGTCATCAGTCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG : GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGA</gDNA_template>
            <first_frame> A  N  S  K  K  K  I  P  S  R  L  H  K  E  K  K  K  *  G  E  L  G  E  Y  R  F  G  Y  H  F  I  F  F  F  T  Y  F  K  T  C  L  L  *  V  F  W  V  H  I  Y  T  Y  I  H  I  Y  I  Y  I  Y  I  Y  I  Y  I  Y  K  L  I  I  I  L  C  V  H  V  F  F  S  V  L  E  G  K  G  L  R  R  I  E  A  V  D  G  F  L  K  G  K  E  K  E  *  E  E  H  D  *  V  E  R  R  D  L  L  S  *  G  F  N  G  S  E  C  G  S  C  F  C  R  C  R  Y  C  S  S  C  F  C  S   : V  N  E  N  S  L  S  E  Y  T  Q  W  L  D  S  S  E   : S  I  S  L  D  D  W  I  F  K  F  G :   L  F  P  L  F  Y  F  D  N  C  C  R  M  *  W  L  D  F  L  V  A  L  L  W  L  C  R  Y  G :   F  P  Q  N  S  F  P  C  G  I  S  S  S  P  F  F  L  :  G  *  S  L  S  S  V  K  *  *  R  R  *  R  *  C  I  *  P  S  R  S  F  V  G  E  E  Q  A  K  F  K  C  *  *  S  P  K  M  L  L  F  S  C  C  Q  S  G  K  P  P  K  S  C  G  S   : G  Y  P  V  S  F  S  V  N  V  G  S  C  C  T  N  M   </first_frame>
            <second_frame>  Q  I  Q  R  K  R  Y  H  R  G  C  I  K  R  K  K  S  K  G  N  *  E  S  I  V  L  D  T  I  S  F  S  F  L  L  T  S  R  L  V  C  C  K  C  F  G  Y  I  Y  I  H  I  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  S  L  S  S  Y  C  V  S  T  F  F  S  L  Y  *  R  G  K  G  *  E  G  L  R  Q  W  M  V  F  *  K  V  K  K  K  S  E  K  N  M  I  E  W  R  E  G  T  C  Y  P  K  A  L  M  G  V  N  V  G  L  A  S  V  D  A  V  I  A  V  L  A  F  A  Q  :  L  M  R  I  H  S  R  N  T  H  N  G  W  T  R  Q  K  :  V  F  H  L  M  I  G  S  S  N  L   : G  Y  F  L  Y  F  I  L  T  I  V  A  A  C  N  G  W  I  F  W  S  H  S  C  G  F  V  V  M   : A  F  P  K  I  L  F  L  A  A  F  L  L  L  L  S  F  W :   V  D  L  C  H  Q  S  N  D  E  E  D  E  D  D  V  Y  S  P  R  E  A  L  L  E  K  N  K  P  N  S  N  A  D  S  R  R  R  C  C  S  F  R  A  V  K  V  G  S  R  Q  K  V  V  V  L  :  V  T  L  L  V  F  L  L  M  L  V  A  A  V  L  I  W  </second_frame>
            <third_frame>   K  F  K  E  K  D  T  I  E  A  A  *  R  E  K  K  V  R  G  I  R  R  V  S  F  W  I  P  F  H  F  L  F  Y  L  L  Q  D  L  F  V  V  S  V  L  G  T  Y  I  Y  I  Y  T  Y  I  Y  I  Y  I  Y  I  Y  I  Y  I  *  A  Y  H  H  I  V  C  P  R  F  F  L  C  I  R  G  E  R  A  K  K  D  *  G  S  G  W  F  F  K  R  *  R  K  R  V  R  R  T  *  L  S  G  E  K  G  L  V  I  L  R  L  *  W  E  *  M  W  V  L  L  L  S  M  P  L  L  Q  F  L  L  L  L  S :   *  *  E  F  T  L  G  I  H  T  M  A  G  L  V  R  K :   Y  F  T  *  *  L  D  L  Q  I  W  :  V  I  S  F  I  L  F  *  Q  L  L  P  H  V  M  V  G  F  S  G  R  T  P  V  A  L  S  L  W  :  L  S  P  K  F  F  S  L  R  H  F  F  F  S  F  L  S   : G  L  I  F  V  I  S  Q  M  M  K  K  M  K  M  M  Y  I  A  L  E  K  L  C  W  R  R  T  S  Q  I  Q  M  L  I  V  A  E  D  A  A  L  F  V  L  S  K  W  E  A  A  K  K  L  W  F  W :   L  P  C  *  F  F  C  *  C  W  *  L  L  Y  *  Y  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71485" stop="71354"/>
                    <exon start="67299" stop="67249"/>
                    <exon start="65175" stop="65142"/>
                    <exon start="63509" stop="63423"/>
                    <exon start="63351" stop="63300"/>
                    <exon start="62102" stop="61934"/>
                    <exon start="61347" stop="61297"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVKKKSEKNMIEWREGTCYPKALMGVNVGLASVDAVIAVLAFAQLMRIHSRNTHNGWTRQKVFHLMIGSSNLGYFLYFILTIVAACNGWIFWSHSCGFVVMAFPKILFLAAFLLLLSFWVDLCHQSNDEEDEDDVYSPREALLEKNKPNSNADSRRRCCSFRAVKVGSRQKVVVLVTLLVFLLMLVAAVLIW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="71558" e_stop="71354"/>
            <exon e_start="67299" e_stop="67249"/>
            <exon e_start="65175" e_stop="65142"/>
            <exon e_start="63351" e_stop="63300"/>
            <exon e_start="62083" e_stop="61934"/>
            <exon e_start="61347" e_stop="61252"/>
            <exon e_start="60683" e_stop="60623"/>
            <exon e_start="60024" e_stop="60010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="0.995"/>
          <exon-intron don_prob="0.990" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.568" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.812" acc_prob="0.814" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.040" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="71558" e_stop="71354" e_length="205"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="71353" i_stop="67300" i_length="4054"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="67299" e_stop="67249" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.967">
            <gDNA_intron_boundary i_start="67248" i_stop="65176" i_length="2073"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65175" e_stop="65142" e_length="34"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.568">
            <gDNA_intron_boundary i_start="65141" i_stop="63352" i_length="1790"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="63351" e_stop="63300" e_length="52"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.983">
            <gDNA_intron_boundary i_start="63299" i_stop="62084" i_length="1216"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="62083" e_stop="61934" e_length="150"/>
          </exon>
          <intron i_serial="5" don_prob="0.812" acc_prob="0.814">
            <gDNA_intron_boundary i_start="61933" i_stop="61348" i_length="586"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="61347" e_stop="61252" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.040">
            <gDNA_intron_boundary i_start="61251" i_stop="60684" i_length="568"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="60683" e_stop="60623" e_length="61"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.994">
            <gDNA_intron_boundary i_start="60622" i_stop="60025" i_length="598"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="60024" e_stop="60010" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71558" stop="71354"/>
              <exon start="67299" stop="67249"/>
              <exon start="65175" stop="65142"/>
              <exon start="63351" stop="63300"/>
              <exon start="62083" stop="61934"/>
              <exon start="61347" stop="61252"/>
              <exon start="60683" stop="60623"/>
              <exon start="60024" stop="60010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587655" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTGTCCACGTTTTTTTCTCTGTATTAGAGGGGAAAGGGCTAAGAAGGATTGAGGCAGTGGATGGTTTTTTAAAAGGTAAAGAAAAAGAGTGAGAAGAACATGATTGAGTGGAGAGAAGGGACTTGTTATCCTAAGGCTTTAATGGGAGTGAATGTGGGTCTTGCTTCTGTCGATGCCGTTATTGCAGTTCTTGCTTTTGCTCAG : TTAATGAGAATTCACTCTCGGAATACACACAATGGCTGGACTCGTCAGAAA : GTATTTCACTTGATGATTGGATCTTCAAATTTGG : CTTTCCCCAAAATTCTTTTCCTTGCGGCATTTCTTCTTCTCCTTTCTTTCTG : TCAAATGATGAAGAAGATGAAGATGATGTATATAGCCCTCGAGAAGCTTTGTTGGAGAAGAACAAGCCAAATTCAAATGCTGATAGTCGCCGAAGATGCTGCTCTTTTCGTGCTGTCAAAGTGGGAAGCCGCCAAAAAGTTGTGGTTCTG : GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTGTGGCTCGG : GTGTATGTAGATCTCTTTGCCTTAGCAGTTCTTTTGCTGGGAGTGGCATTGGCATGCTATG : GACTGGTATTGTTCT</gDNA_template>
            <first_frame> C  V  H  V  F  F  S  V  L  E  G  K  G  L  R  R  I  E  A  V  D  G  F  L  K  G  K  E  K  E  *  E  E  H  D  *  V  E  R  R  D  L  L  S  *  G  F  N  G  S  E  C  G  S  C  F  C  R  C  R  Y  C  S  S  C  F  C  S   : V  N  E  N  S  L  S  E  Y  T  Q  W  L  D  S  S  E   : S  I  S  L  D  D  W  I  F  K  F  G :   F  P  Q  N  S  F  P  C  G  I  S  S  S  P  F  F  L  :  S  N  D  E  E  D  E  D  D  V  Y  S  P  R  E  A  L  L  E  K  N  K  P  N  S  N  A  D  S  R  R  R  C  C  S  F  R  A  V  K  V  G  S  R  Q  K  V  V  V  L  :  V  T  L  L  V  F  L  L  M  L  V  A  A  V  L  I  W  I  G  R  G  R  N  P  I  D  S  S  V  V  A  R  :  V  Y  V  D  L  F  A  L  A  V  L  L  L  G  V  A  L  A  C  Y   : G  L  V  L  F  </first_frame>
            <second_frame>  V  S  T  F  F  S  L  Y  *  R  G  K  G  *  E  G  L  R  Q  W  M  V  F  *  K  V  K  K  K  S  E  K  N  M  I  E  W  R  E  G  T  C  Y  P  K  A  L  M  G  V  N  V  G  L  A  S  V  D  A  V  I  A  V  L  A  F  A  Q  :  L  M  R  I  H  S  R  N  T  H  N  G  W  T  R  Q  K  :  V  F  H  L  M  I  G  S  S  N  L   : A  F  P  K  I  L  F  L  A  A  F  L  L  L  L  S  F  C :   Q  M  M  K  K  M  K  M  M  Y  I  A  L  E  K  L  C  W  R  R  T  S  Q  I  Q  M  L  I  V  A  E  D  A  A  L  F  V  L  S  K  W  E  A  A  K  K  L  W  F  W :   L  P  C  *  F  F  C  *  C  W  *  L  L  Y  *  Y  G  L  G  G  E  G  T  L  L  I  H  L  L  W  L  G :   C  M  *  I  S  L  P  *  Q  F  F  C  W  E  W  H  W  H  A  M  :  D  W  Y  C  S </second_frame>
            <third_frame>   C  P  R  F  F  L  C  I  R  G  E  R  A  K  K  D  *  G  S  G  W  F  F  K  R  *  R  K  R  V  R  R  T  *  L  S  G  E  K  G  L  V  I  L  R  L  *  W  E  *  M  W  V  L  L  L  S  M  P  L  L  Q  F  L  L  L  L  S :   *  *  E  F  T  L  G  I  H  T  M  A  G  L  V  R  K :   Y  F  T  *  *  L  D  L  Q  I  W  :  L  S  P  K  F  F  S  L  R  H  F  F  F  S  F  L  S   : V  K  *  *  R  R  *  R  *  C  I  *  P  S  R  S  F  V  G  E  E  Q  A  K  F  K  C  *  *  S  P  K  M  L  L  F  S  C  C  Q  S  G  K  P  P  K  S  C  G  S   : G  Y  P  V  S  F  S  V  N  V  G  S  C  C  T  N  M  D  W  E  G  K  E  P  Y  *  F  I  C  C  G  S   : G  V  C  R  S  L  C  L  S  S  S  F  A  G  S  G  I  G  M  L  W :   T  G  I  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71423" stop="71354"/>
                    <exon start="67299" stop="67249"/>
                    <exon start="65175" stop="65142"/>
                    <exon start="63351" stop="63300"/>
                    <exon start="62083" stop="61934"/>
                    <exon start="61347" stop="61252"/>
                    <exon start="60683" stop="60623"/>
                    <exon start="60024" stop="60011"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>528</number_coding_nucleotides>
                  <number_encoded_amino_acids>176</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GFNGSECGSCFCRCRYCSSCFCSVNENSLSEYTQWLDSSESISLDDWIFKFGFPQNSFPCGISSSPFFLSNDEEDEDDVYSPREALLEKNKPNSNADSRRRCCSFRAVKVGSRQKVVVLVTLLVFLLMLVAAVLIWIGRGRNPIDSSVVARVYVDLFALAVLLLGVALACYGLVLF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="83004" PGL_stop="82235"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83004" e_stop="82235"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="83004" e_stop="82235" e_length="770"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83004" stop="82235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569563" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTCTAGTCATGTGCATCATGATCTTGGCTAGGGAATATGTAGAAAATGCATGTTCTTTCATAAGGGCTATTCACTGATCAAATGAAATGGGAAAAAGTTGAAGACAAAGAACACAAATTATTTATCTCCTCGCACATTACACTAGGGACGGGAAATCATGGTAGGTGAAGCTATGTGTGTGAGAATCATTTTAGCTGTCCATTAAATTTTTCGTAAGATCCACAAACTCGCCAGAATTGCAGCTTAGCAGTTGAAAGACAACTTATACAAACATTGTTTTTTACCTTTCACCGAACATCAAAACCCAAAAGAGAATATGGAAGGAAGTGCAGAATCAATGAAGAACTCAACTTTCTGCACTGGAGGTCTTTCCACTCATTTATTGATTTTCATTATATTACATTCGTTGGATTTACAAACTTGTACCAATGTGTTCTGAGCATTGTGGATGCAGGTCTCAAGGGCGAGCCCCATATGATCATCTGATGGAATTGTACATTGATTGGTGATTTTCAGCTAGAAACGAGGGATTGACAATACTAAAAATGAGACAACTTCTCAGTTGAGTGGTTGGTGTTGTGGTTGAGTGATCGAAGAAAGCTCAACTCAACGGGAAAATAATACCCCATGTATCTAAGCAAGGTGGGTTGCTCAGGGTATACATGCCTGCATAACTTGGATTTCTGTATATATCAAACATTGCAATGAACTTTCCAAATTTTACAGATTCTTTTTTGTTGATATAATGAGGTTTTAGATTTTTCTTGC</gDNA_template>
            <first_frame> V  S  S  H  V  H  H  D  L  G  *  G  I  C  R  K  C  M  F  F  H  K  G  Y  S  L  I  K  *  N  G  K  K  L  K  T  K  N  T  N  Y  L  S  P  R  T  L  H  *  G  R  E  I  M  V  G  E  A  M  C  V  R  I  I  L  A  V  H  *  I  F  R  K  I  H  K  L  A  R  I  A  A  *  Q  L  K  D  N  L  Y  K  H  C  F  L  P  F  T  E  H  Q  N  P  K  E  N  M  E  G  S  A  E  S  M  K  N  S  T  F  C  T  G  G  L  S  T  H  L  L  I  F  I  I  L  H  S  L  D  L  Q  T  C  T  N  V  F  *  A  L  W  M  Q  V  S  R  A  S  P  I  *  S  S  D  G  I  V  H  *  L  V  I  F  S  *  K  R  G  I  D  N  T  K  N  E  T  T  S  Q  L  S  G  W  C  C  G  *  V  I  E  E  S  S  T  Q  R  E  N  N  T  P  C  I  *  A  R  W  V  A  Q  G  I  H  A  C  I  T  W  I  S  V  Y  I  K  H  C  N  E  L  S  K  F  Y  R  F  F  F  V  D  I  M  R  F  *  I  F  L   </first_frame>
            <second_frame>  F  L  V  M  C  I  M  I  L  A  R  E  Y  V  E  N  A  C  S  F  I  R  A  I  H  *  S  N  E  M  G  K  S  *  R  Q  R  T  Q  I  I  Y  L  L  A  H  Y  T  R  D  G  K  S  W  *  V  K  L  C  V  *  E  S  F  *  L  S  I  K  F  F  V  R  S  T  N  S  P  E  L  Q  L  S  S  *  K  T  T  Y  T  N  I  V  F  Y  L  S  P  N  I  K  T  Q  K  R  I  W  K  E  V  Q  N  Q  *  R  T  Q  L  S  A  L  E  V  F  P  L  I  Y  *  F  S  L  Y  Y  I  R  W  I  Y  K  L  V  P  M  C  S  E  H  C  G  C  R  S  Q  G  R  A  P  Y  D  H  L  M  E  L  Y  I  D  W  *  F  S  A  R  N  E  G  L  T  I  L  K  M  R  Q  L  L  S  *  V  V  G  V  V  V  E  *  S  K  K  A  Q  L  N  G  K  I  I  P  H  V  S  K  Q  G  G  L  L  R  V  Y  M  P  A  *  L  G  F  L  Y  I  S  N  I  A  M  N  F  P  N  F  T  D  S  F  L  L  I  *  *  G  F  R  F  F  L  </second_frame>
            <third_frame>   F  *  S  C  A  S  *  S  W  L  G  N  M  *  K  M  H  V  L  S  *  G  L  F  T  D  Q  M  K  W  E  K  V  E  D  K  E  H  K  L  F  I  S  S  H  I  T  L  G  T  G  N  H  G  R  *  S  Y  V  C  E  N  H  F  S  C  P  L  N  F  S  *  D  P  Q  T  R  Q  N  C  S  L  A  V  E  R  Q  L  I  Q  T  L  F  F  T  F  H  R  T  S  K  P  K  R  E  Y  G  R  K  C  R  I  N  E  E  L  N  F  L  H  W  R  S  F  H  S  F  I  D  F  H  Y  I  T  F  V  G  F  T  N  L  Y  Q  C  V  L  S  I  V  D  A  G  L  K  G  E  P  H  M  I  I  *  W  N  C  T  L  I  G  D  F  Q  L  E  T  R  D  *  Q  Y  *  K  *  D  N  F  S  V  E  W  L  V  L  W  L  S  D  R  R  K  L  N  S  T  G  K  *  Y  P  M  Y  L  S  K  V  G  C  S  G  Y  T  C  L  H  N  L  D  F  C  I  Y  Q  T  L  Q  *  T  F  Q  I  L  Q  I  L  F  C  *  Y  N  E  V  L  D  F  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82786" stop="82517"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DPQTRQNCSLAVERQLIQTLFFTFHRTSKPKREYGRKCRINEELNFLHWRSFHSFIDFHYITFVGFTNLYQCVLSIVDAGLKGEPHMII*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="87423" PGL_stop="83269"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87423" e_stop="87166"/>
            <exon e_start="87091" e_stop="87040"/>
            <exon e_start="85664" e_stop="85569"/>
            <exon e_start="84333" e_stop="84269"/>
            <exon e_start="83997" e_stop="83864"/>
            <exon e_start="83808" e_stop="83269"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.947" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.382" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.972" e_score="0.985"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.761"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87423" e_stop="87166" e_length="258"/>
          </exon>
          <intron i_serial="1" don_prob="0.947" acc_prob="0.000">
            <gDNA_intron_boundary i_start="87165" i_stop="87092" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87091" e_stop="87040" e_length="52"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.382">
            <gDNA_intron_boundary i_start="87039" i_stop="85665" i_length="1375"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="85664" e_stop="85569" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.994">
            <gDNA_intron_boundary i_start="85568" i_stop="84334" i_length="1235"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="84333" e_stop="84269" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.971" acc_prob="0.972">
            <gDNA_intron_boundary i_start="84268" i_stop="83998" i_length="271"/>
          </intron>
          <exon e_serial="5" e_score="0.761">
            <gDNA_exon_boundary e_start="83997" e_stop="83864" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="83863" i_stop="83809" i_length="55"/>
          </intron>
          <exon e_serial="6" e_score="0.983">
            <gDNA_exon_boundary e_start="83808" e_stop="83269" e_length="540"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87423" stop="87166"/>
              <exon start="87091" stop="87040"/>
              <exon start="85664" stop="85569"/>
              <exon start="84333" stop="84269"/>
              <exon start="83997" stop="83864"/>
              <exon start="83808" stop="83269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584093" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTAATTTTGGACATGGAACTTTGATAAACCACCTGTGCACGTGTATACAGTTATTTAAATACCTTACCTTTATCTTCTTTTATTTTTTACTTTCTGTGCATTTCATAAGGATCTTACTGTCCGGCAAGTAATAGTATGAATCGGTCATTAACTTTATTCTCCTGCAGGTTATTTCCTTTATTTTTTGTTGACAGTTGTTGCTGCATGTAAGGGTTGGATTTTCTGGCGCACTCCTGTGGCTTTGTTGTAATGGGTAG : CTTTCACCAGAATTCTTTTCCTTGCTGCATTTCTTCTTCTCCTTTCTTTCTG : GTTACCCTGTTAGTTTTTCTGTTAATGTTGGTAGCTGCTGTACTAATATGGATTGGGAGGGGAAGGAACCCTATTGATTCATCTGTTCTGGCTCGG : GACTGGTATTGTTCTTGAAAATGAGCAAAGTGAGATCTGAAAGGGCTTCATCAGAAATGTGGAAG : GTTGCAGGCTTGGCAGTTGTTTCTGTTCTATGTTTCACTTTAAGTGAGCTGTCGCCTTATTCACAGATATACCCGTATGTCTTCTGCTGGTCTCATGAGATGTCTTTTGTTTTGACTGCATAAGTTTCTAAGAG : TTTGTACATCTCTTCTCATGGTTTTATATTATTTTATAGGTACCCTTTAAAACTTGTGTTCCTTACTGAAAGCTTGATTTTAAATTCTAGACTTCAGTGGGAACTTCTGCTTTCTGCCTGCTAATTGTTGTTACCAATTGTTGAAGCTATGAGATTCTCCTCAAGCCCAACCCCTTATACCTAGGAGCTACTAACTGTAGTTAATTAGATGAAAAAGGCTGAACATGGTGGAAGGAACCAATTTAATAATCAGAGGTTGCTCTGATGATGTTACATAAGTGCATTAATATCGTAAACATTTTGAGGAGTTGTGAGATGTCTCTCTGGATCCTTTTTACAGAAGTTGGGAGCTATAGAGTAAGGACTTAACATAAGAGCTAGATTGGGACATATTAGATATTTCTTTAGAATTCGGGGCATGACTGAGAGGGGACTCCAGTTAATTTGTTCAACCAAGAATGCAAGTAGCGTGTACGTGTTTTGTTGGGGGGAGCTGATCTTACAATGCAGTTCTTTCCTACAAATTAGAATTTTATTCAC</gDNA_template>
            <first_frame> A  N  F  G  H  G  T  L  I  N  H  L  C  T  C  I  Q  L  F  K  Y  L  T  F  I  F  F  Y  F  L  L  S  V  H  F  I  R  I  L  L  S  G  K  *  *  Y  E  S  V  I  N  F  I  L  L  Q  V  I  S  F  I  F  C  *  Q  L  L  L  H  V  R  V  G  F  S  G  A  L  L  W  L  C  C  N  G  *  :  L  S  P  E  F  F  S  L  L  H  F  F  F  S  F  L  S   : G  Y  P  V  S  F  S  V  N  V  G  S  C  C  T  N  M  D  W  E  G  K  E  P  Y  *  F  I  C  S  G  S   : G  L  V  L  F  L  K  M  S  K  V  R  S  E  R  A  S  S  E  M  W  K  :  V  A  G  L  A  V  V  S  V  L  C  F  T  L  S  E  L  S  P  Y  S  Q  I  Y  P  Y  V  F  C  W  S  H  E  M  S  F  V  L  T  A  *  V  S  K  S :   L  Y  I  S  S  H  G  F  I  L  F  Y  R  Y  P  L  K  L  V  F  L  T  E  S  L  I  L  N  S  R  L  Q  W  E  L  L  L  S  A  C  *  L  L  L  P  I  V  E  A  M  R  F  S  S  S  P  T  P  Y  T  *  E  L  L  T  V  V  N  *  M  K  K  A  E  H  G  G  R  N  Q  F  N  N  Q  R  L  L  *  *  C  Y  I  S  A  L  I  S  *  T  F  *  G  V  V  R  C  L  S  G  S  F  L  Q  K  L  G  A  I  E  *  G  L  N  I  R  A  R  L  G  H  I  R  Y  F  F  R  I  R  G  M  T  E  R  G  L  Q  L  I  C  S  T  K  N  A  S  S  V  Y  V  F  C  W  G  E  L  I  L  Q  C  S  S  F  L  Q  I  R  I  L  F   </first_frame>
            <second_frame>  L  I  L  D  M  E  L  *  *  T  T  C  A  R  V  Y  S  Y  L  N  T  L  P  L  S  S  F  I  F  Y  F  L  C  I  S  *  G  S  Y  C  P  A  S  N  S  M  N  R  S  L  T  L  F  S  C  R  L  F  P  L  F  F  V  D  S  C  C  C  M  *  G  L  D  F  L  A  H  S  C  G  F  V  V  M  G  S :   F  H  Q  N  S  F  P  C  C  I  S  S  S  P  F  F  L  :  V  T  L  L  V  F  L  L  M  L  V  A  A  V  L  I  W  I  G  R  G  R  N  P  I  D  S  S  V  L  A  R  :  D  W  Y  C  S  *  K  *  A  K  *  D  L  K  G  L  H  Q  K  C  G  R :   L  Q  A  W  Q  L  F  L  F  Y  V  S  L  *  V  S  C  R  L  I  H  R  Y  T  R  M  S  S  A  G  L  M  R  C  L  L  F  *  L  H  K  F  L  R   : V  C  T  S  L  L  M  V  L  Y  Y  F  I  G  T  L  *  N  L  C  S  L  L  K  A  *  F  *  I  L  D  F  S  G  N  F  C  F  L  P  A  N  C  C  Y  Q  L  L  K  L  *  D  S  P  Q  A  Q  P  L  I  P  R  S  Y  *  L  *  L  I  R  *  K  R  L  N  M  V  E  G  T  N  L  I  I  R  G  C  S  D  D  V  T  *  V  H  *  Y  R  K  H  F  E  E  L  *  D  V  S  L  D  P  F  Y  R  S  W  E  L  *  S  K  D  L  T  *  E  L  D  W  D  I  L  D  I  S  L  E  F  G  A  *  L  R  G  D  S  S  *  F  V  Q  P  R  M  Q  V  A  C  T  C  F  V  G  G  S  *  S  Y  N  A  V  L  S  Y  K  L  E  F  Y  S  </second_frame>
            <third_frame>   *  F  W  T  W  N  F  D  K  P  P  V  H  V  Y  T  V  I  *  I  P  Y  L  Y  L  L  L  F  F  T  F  C  A  F  H  K  D  L  T  V  R  Q  V  I  V  *  I  G  H  *  L  Y  S  P  A  G  Y  F  L  Y  F  L  L  T  V  V  A  A  C  K  G  W  I  F  W  R  T  P  V  A  L  L  *  W  V   : A  F  T  R  I  L  F  L  A  A  F  L  L  L  L  S  F  W :   L  P  C  *  F  F  C  *  C  W  *  L  L  Y  *  Y  G  L  G  G  E  G  T  L  L  I  H  L  F  W  L  G :   T  G  I  V  L  E  N  E  Q  S  E  I  *  K  G  F  I  R  N  V  E   : G  C  R  L  G  S  C  F  C  S  M  F  H  F  K  *  A  V  A  L  F  T  D  I  P  V  C  L  L  L  V  S  *  D  V  F  C  F  D  C  I  S  F  *  E  :  F  V  H  L  F  S  W  F  Y  I  I  L  *  V  P  F  K  T  C  V  P  Y  *  K  L  D  F  K  F  *  T  S  V  G  T  S  A  F  C  L  L  I  V  V  T  N  C  *  S  Y  E  I  L  L  K  P  N  P  L  Y  L  G  A  T  N  C  S  *  L  D  E  K  G  *  T  W  W  K  E  P  I  *  *  S  E  V  A  L  M  M  L  H  K  C  I  N  I  V  N  I  L  R  S  C  E  M  S  L  W  I  L  F  T  E  V  G  S  Y  R  V  R  T  *  H  K  S  *  I  G  T  Y  *  I  F  L  *  N  S  G  H  D  *  E  G  T  P  V  N  L  F  N  Q  E  C  K  *  R  V  R  V  L  L  G  G  A  D  L  T  M  Q  F  F  P  T  N  *  N  F  I  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87212" stop="87166"/>
                    <exon start="87091" stop="87040"/>
                    <exon start="85664" stop="85569"/>
                    <exon start="84333" stop="84316"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLDFLAHSCGFVVMGSFHQNSFPCCISSSPFFLVTLLVFLLMLVAAVLIWIGRGRNPIDSSVLARDWYCS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0091J18.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85587" stop="85569"/>
                    <exon start="84333" stop="84269"/>
                    <exon start="83997" stop="83875"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FICSGSGLVLFLKMSKVRSERASSEMWKVAGLAVVSVLCFTLSELSPYSQIYPYVFCWSHEMSFVLTA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 95 chains have been computed
$ 
$ memory statistics:
$ 66872 bytes spliced alignments in total
$ 29 spliced alignments have been stored
$ 2305 bytes was the average size of a spliced alignment
$ 28400 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1494 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 120 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:26:07
-->
