<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 01:42:15"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E392004" ref_strand="+" ref_description="SGN-E392004 [TUS-24-I6](-)">
      <seq>gccgtgtttcacgatgtgcccttcagaatgctgtctccgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttccttatgttcctggtataactccttaaaagttcgaaggataaaccttggtcgaagcactagacaaggaagtttcaattcatgatgttgtcttacaagggaagttctggtttgccactttgacttggatgagatatttagaagagttgaaaatcttgtgtccagctgaaactagagattgtctcattgcagataaaattgcttccagacacgagcattttctagcctcgactcttggtaggaaaatatagttaatcctcaagcatacaggaactgttttgatcccaatagcacagtcatcttgtttcagtagtacttgttcctgcaggcggaggattgtcattttcaggtttctattagtattttgatcagtgagatacgattataccaaatgtcttgaagcaaagatgaatagtttctattagtactaaactgctgcatgttgttgtatgtttgatatgaaaggatatgaaattagaatcccatatcatgaatagggctaatatcaaaatttcaactttttagttttttacaccccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="10309" stop="9062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10009" g_stop="9364" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E392004" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392004" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10009" e_stop="9364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGATCAGTGAGATACGATTATACCAAATGTCTTGAAGCAAAGATGAATAGTTTCTATTAGTACTAAACTGCTGCATGTTGTTGTATGTTTGATATGAAAGGATATGAAATTAGAATCCCATATCATGAATAGGGCTAATATCAAAATTTCAACTTTTTAGTTTTTTACACCCCAAA</genome_strand>
        <mrna_strand>GCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGATCAGTGAGATACGATTATACCAAATGTCTTGAAGCAAAGATGAATAGTTTCTATTAGTACTAAACTGCTGCATGTTGTTGTATGTTTGATATGAAAGGATATGAAATTAGAATCCCATATCATGAATAGGGCTAATATCAAAATTTCAACTTTTTAGTTTTTTACACCCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427943" ref_strand="+" ref_description="SGN-E427943 [STM-49-I22]">
      <seq>cacaccttttttttaagttgaaattttgataccagccctattcataatatgggattctaatttcatatcctttcatattaaacctacaacaacatgcagcagtttactactaatagaaactattcatctttgcttcaaggcatttggtataatcgtatcccactgatcgaaactactgatagaaacctgaaaatgacgatcctctgcctgcaggaacaagtactactgaaacaagatgaccgtgtgctattgggatcaaaacagttcctgtatgcttgaggattaactaaattttcctaccaagaatcaaggctagaaaatgctcgtatctggaagcaattttatctgcaatgagcacaatctctagtatcagctggaaacaagaatttcaactctttccaacgtctcatccaagtcaaagtggcaaaccagagcttgccttttaagacaacaacataaattggaacttccttgtccagtgctttgaccaaaggtttatccttcatccttttaaggacttataccaggaatatgaggaacaaggggtttgggctccttggttttctctaccattattgcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="9085" stop="10248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9388" g_stop="9948" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="583" r_length="566" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E427943" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9388" e_stop="9948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAATTTTGATATTAGCCCTATTCATGATATGGGATTCTAATTTCATATCCTTTCATATCAAACATACAACAACATGCAGCAGTTTAGTACTAATAGAAACTATTCATCTTTGCTTCAAGACATTTGGTATAATCGTATCTCACTGATC-AAAATACTAATAGAAACCTGAAAATGACAATCCTCCGCCTGCAGGAACAAGTACTACTGAAACAAGATGA-C-TGTGCTATTGGGATCAAAACAGTTCCTGTATGCTTGAGGATTAACTATATTTTCCTACCAAGAGTCGAGGCTAGAAAATGCTCGTGTCTGGAAGCAATTTTATCTGCAATGAG-ACAATCTCTAGTTTCAGCTGGACACAAGATTTTCAACTCTTCTAAATATCTCATCCAAGTCAAAGTGGCAAACCAGAACTTCCCTTGTAAGACAACATCATGAATTGAAACTTCCTTGTCTAGTGCTTCGACC-AAGGTTTATCCTTCGAACTTTTAAGGAGTTATACCAGGAACATAAGGAACAAGGGGTTTGGGCTCCTTGGTTTTCTCTACCATTATTGCTTGA</genome_strand>
        <mrna_strand>TTGAAATTTTGATACCAGCCCTATTCATAATATGGGATTCTAATTTCATATCCTTTCATATTAAACCTACAACAACATGCAGCAGTTTACTACTAATAGAAACTATTCATCTTTGCTTCAAGGCATTTGGTATAATCGTATCCCACTGATCGAAACTACTGATAGAAACCTGAAAATGACGATCCTCTGCCTGCAGGAACAAGTACTACTGAAACAAGATGACCGTGTGCTATTGGGATCAAAACAGTTCCTGTATGCTTGAGGATTAACTAAATTTTCCTACCAAGAATCAAGGCTAGAAAATGCTCGTATCTGGAAGCAATTTTATCTGCAATGAGCACAATCTCTAGTATCAGCTGGAAACAAGAATTTCAACTCTTTCCAACGTCTCATCCAAGTCAAAGTGGCAAACCAGAGCTTGCCTTTTAAGACAACAACATAAATTGGAACTTCCTTGTCCAGTGCTTTGACCAAAGGTTTATCCTTCATCCTTTTAAGGACTTATACCAGGAATATGAGGAACAAGGGGTTTGGGCTCCTTGGTTTTCTCTACCATTATTGCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E351230" ref_strand="+" ref_description="SGN-E351230 [cTOS-6-O4]">
      <seq>ggaaaatggggtataacgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctccgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttccttatgttcctggtataactccttaaaagttcgaaggataaaccttggtcgaagcactagacaaggaagtttcaattcatgatgttgtcttacaagggaagttctggtttgccactttgacttggatgagatatttagaagagttgaaaatcttgtgtccagctgaaactagagattgtctcattgcagataaaattgcttccagacacgagcattttctagcctcgactcttggtaggaaaatatagttaatcctcaagcatacaggaactgttttgatcccaatagcacagtcatcttgtttcagtagtacttgttcctgcaggcggaggattgtcattttcaggtttctattagtattttgatcagtgagatacgattataccaaatgtcttgaagcaaagatgaatagtttctattagtactaaactgctgcatgttgttgtatgtttgatatgaaaggatatgaaattagaatcccatatcatgaaataaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="10378" stop="9109"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10078" g_stop="9412" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="667" r_length="667" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="668" polyA_stop="678"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E351230" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10078" e_stop="9412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGATCAGTGAGATACGATTATACCAAATGTCTTGAAGCAAAGATGAATAGTTTCTATTAGTACTAAACTGCTGCATGTTGTTGTATGTTTGATATGAAAGGATATGAAATTAGAATCCCATATCATGA</genome_strand>
        <mrna_strand>GGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGATCAGTGAGATACGATTATACCAAATGTCTTGAAGCAAAGATGAATAGTTTCTATTAGTACTAAACTGCTGCATGTTGTTGTATGTTTGATATGAAAGGATATGAAATTAGAATCCCATATCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745157" ref_strand="+" ref_description="SGN-E745157 [GI|47105971]">
      <seq>gacccctaaaacctccacagcctgcaaaacctcatctcacccccacgccaccccaccccaccccaaccccttctgcttacaagatgtccctctcaatgtgttcacctttatactctccattaaagctttctttcaaggaagataaaggaaagggtaattcttggggattgaggcaaagtttagggaagaagaaattgatggtggtgagagctggcccaaagagaatagcttttgataaagaatgcagaagagctttactttctggtatcaataagcttgctgatgctgtttctgtcactttaggacctaaaggccggaacgtagttctctctgaagctggggggctgaaaataattaatgatggtgttaccatagctcaagccatagaacttccagatacaattgaaaatgctggagcgacacttatccaggaggttgcaactaagaccaacaggttagctggtgacggtacaactactgcaattgttttggcccgtgagatgatcaaagctgggttattagctgttgattttggcgctaaccctgtatctatgaagaaaggtatggatcagacagtaagagagctggtcaatactttgaagaagaaaagtcatcctgttagaggaaatgatgatataaaagccgtagcttcaatatcagctggaaatgacgagttcattggcagtttgattgctgaggcaattaacaagattggtcctgatggagtgatatgtattgagtcttcctcatcagctgaaacctcgatcatggttgaagaaggaatgaaggcgttcttttcctacagattgacaaggggtacatgtcacctcatttcatcaacaatcccgaaaaatctatagtagagtttgaaaatgccaaagttctggtaaccgatcaaaagatatgtagtgtcaaagaaattgttcctttgctagagaaggccactcaactgagtgtgccactgctgatttttgctgaggacattacaaaccaagtgctagaaacacttgtcattaacaagatgcaaggaatgctcaatgttgctgttgtgcaatgtccaggatttcgagatggaaagaaaggtgtattacaagacattgccatgttgacaggtgctgattttctttctggagacttaggcctgactcttgaaagtgcaacctccgatcagcttggtattgctcggaaaataacaataacaagtaactctacaaccatcgtggctcacccctcgacaaaagctgaaatacaagccagaataatgcagataaagaaggatcttgcagaaacagataataaatctatatcagagaagctttcacaaagaatagcaaaactctctggtggtgtggctatattgaaggtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgcaaaaagtgccacatttgctgccatggatgaaggaatagtgcctggtggtggtgccacttttattcatctttctgaacaaatacccttgataaaagaatcttttcaggatccagatgagcagatcggtgctgacataataggaacggcacttcttgcaccagcaaagttaatagctgcaaatgcaggagtggatggggatacagttgtggaaaaagttagaggttgtgactggaaaatggggtataacgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctccgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttccttatgttcctggtataactccttaaaagttcgaaggataaaccttggtcgaagcactagacaaggaagtttcaattcatgatgttgtcttacaagggaagttctggtttgccactttgacttggatgagatatttagaagagttgaaaatcttgtgtccagctgaaactagagattgtctcattgcagataaaattgcttccagacacgagcattttctagcctcgactcttggtaggaaaatatagttaatcctcaagcatacaggaactgttttgatcccaatagcacagtcatcttgtttcagtagtacttgttcctgcaggcggaggattgtcattttcaggtttctattagtattttgatcagtgagatacgattataccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="14764" stop="9213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14465" g_stop="14329" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14328" i_stop="14227" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14226" g_stop="14052" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="312" r_length="175" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14051" i_stop="12856" i_length="1196">
            <donor d_prob="0.985" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12855" g_stop="12734" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="434" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12733" i_stop="12642" i_length="92">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12641" g_stop="12434" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="642" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12433" i_stop="12336" i_length="98">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12335" g_stop="12190" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="788" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12189" i_stop="11933" i_length="257">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11932" g_stop="11609" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="789" r_stop="1112" r_length="324" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="11608" i_stop="11221" i_length="388">
            <donor d_prob="0.837" d_score="1.00"/>
            <acceptor a_prob="0.672" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="11220" g_stop="10970" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1113" r_stop="1363" r_length="251" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="10969" i_stop="10692" i_length="278">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="10691" g_stop="10491" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1364" r_stop="1564" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="10490" i_stop="10164" i_length="327">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="10163" g_stop="9514" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="1565" r_stop="2214" r_length="650" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2215" polyA_stop="2227"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E745157" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2214</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14465" e_stop="14329"/>
          <exon e_start="14226" e_stop="14052"/>
          <exon e_start="12855" e_stop="12734"/>
          <exon e_start="12641" e_stop="12434"/>
          <exon e_start="12335" e_stop="12190"/>
          <exon e_start="11932" e_stop="11609"/>
          <exon e_start="11220" e_stop="10970"/>
          <exon e_start="10691" e_stop="10491"/>
          <exon e_start="10163" e_stop="9514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCCCTAAAACCTCCACAGCCTGCAAAACCTCATCTCACCCCCACGCCACCCCACCCCACCCCAACCCCTTCTGCTTACAAGATGTCCCTCTCAATGTGTTCACCTTTATACTCTCCATTAAAGCTTTCTTTCAAGGTAACTCTCTCATAATACAGTCAATTCTTTGTAAAAATGTTTAAAGTTGTTGTTTTTGGCTGTTTTTTTTGTATATATTTTGTTCTTGACTTGTTTTTTCAGGAAGATAAAGGAAAGGGTAATTCTTGGGGATTGAGGCAAAGTTTAGGGAAGAAGAAATTGATGGTGGTGAGAGCTGGCCCAAAGAGAATAGCTTTTGATAAAGAATGCAGAAGAGCTTTACTTTCTGGTATCAATAAGCTTGCTGATGCTGTTTCTGTCACTTTAGGACCTAGAGGTATAATGGGTTTTCCTCCTTCTTTGGAAAAAAAATTAGACTTGTTATATAGACATTAGAGGAAATGGAAAATGAAGATGATGGGAACAAAGTTGTTGGTTTATTTTTGATCCTGAGTCAAAATTGTGTGCTCGAGTGAGCTCTAGGCGACCTAGTTAGGAGAGGTTAATAGTTTGTTCTGACAGATTTCTAAAATCAGCTTAATTGCGAAAGTGTTTTTCAGAAAAGTACAACAACAACATGCCCCCATGAAATCCCACAAAGTGCTCTGGAGTGTGTAGAGCATACACAGACCTTAGCCCTGCCTTGTGGATATAGAGAAGCTGGTTTTGGAAGTTCCTCGGCTCGAATGTGCTTATCACAAAAGTACTTTTGTTAAGAAATAGATTGTGTTTGGCCATAAATCTAAAAACACTTTTGTCGTTTGGCCAAGCTTCCTAAAAGTGTTTCTAAGTGTTTTTGAAAAGAACTTATTTTCTCCCAAAAGTTTGATCAAACACCTCACTTTTTAAAGAGCACACATTTTTGGTAAAAATAAGCACTTATAGCCCTCCTAAAATTGGCCAAACAAGCTATAAGAAAGAGATTAGAAGATCCACTAATTTTGTTGTGATGGTTAACAGAAATTAAAGAATTACTTCTTCTCTTATCTTCTGAAAAGAAGAATTCTTTTCAATGTTATAAGCACAGAAACATATTACTTCCTCCTAGAATACAGTTTATCGTGGGACATTTAATTTGTGAAACAAAACCTTTCAAAGAGTAGGATTTGCAACATTTTGTTGGTGGTTTTCTTCAGGTTAAGGCACACTATATTTGTTCAATCTTATGTCTACAGCAAGGCATGATTTTCTAATACTTGTATTGGAGTGCTTGTTTGGATTACCCCATGAAATTGTGGGGGAAAAAACTTTTTAGTGATTTCCTCAAAAAGTTGTATTCTGTATATGGATTTTTGAAAATTATTTACTTAGATTATGACATGAGTTCTCTTTTATCATGTGTACATCCTTTGTGCAACTGATATGTTACCTTTCTCCAAATAAAATAAAACATGATTGGAAGAAATTAGTTGGTATGCACTTGAACTTTTGCTTATCAATCAAATATGTATGAGGAGCTTATTTTTAGACATAGTGTATATGCTGTCTGCCTGCTTGTTTTAGATTTAGATGATTGTGTGACAAATTATGCAGGCCGGAACGTAGTTCTCTCTGAAGCTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAGGTTATTAGTTGAGCCTACACTGAGCATGATTTGGGTCTTTGAATAGTGTTTGAAAAACTCTTAATCTTGTAAATATTTTTTATCTATTGCAGGTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTATTAGCTGTTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAGGTAACTTGCTTTATCTTTATATTGAAGTCAGAAAATTTCTCATTCACTTCAAGAAAAAAATTAATGATTTGATCTCTTTCTCTTCTTACTATGTGCAGCCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAGGTAATATATGCTCTTCAAAGTGTTAGTGTTTGACTTCAATTTCTGTACTGATAAATAAGCTATCTGGTAAAACATGATCCCACCTGAACTTTTCCAAGACTTTCAGGTTTGAAGCAAATCTGAAAGCTCAAACAAAGTGCCTACTAAAAAAATTAACCTCTAGTTATCCATTTATATTTTAAAGCTAATTTCGCCACTTCATATGTAAAATTCTTTTTCTTCCATTTGTTTTCATTATTTTCTTGATTTGTATTCAGGCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAAGGTGTATTACAAGACATTGCCATGTTGACAGGTGAGCCAAATACTTTATTCTGAATTATTGAAGAGGTTAATACATGTGCCCAAACCCAAAAAAAGGGTGTCGAAATGGAGAGAGTGAACAGTAGTTTTAACTTTAAACTCATCTTGAGGATAGATTAGAAACTAGGTGATATCCACAGTGCATGTGTACACAGTTTTCTGGAATGCTTACGTACAAATACATTGATTTTAAGTTCGCCAAATCAGTTATTTCTGTAATGTACGTTGCTCGAGCAATGCTCACAAAAGGGGTTTGCCCTTAACTACTAATACTTTTGTATGCTGTATTGGATTCTCAAGACCTAGTGTTGCCCCAAGCGAAAATTATCTGCGAAGATCTCCTTTACCATGACATCTAACTGGCATTATAATGCAATTAGGTGCTGATTTTCTTTCTGGAGACTTAGGCCTGACTCTTGAAAGTGCAACCTCCGATCAGCTTGGTATTGCTCGGAAAATAACAATAACAAGTAACTCTACAACCATCGTGGCTCACCCCTCGACAAAAGCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAGGTCTGTATTAATTAAGGTGTAGTGTTTTGGATCAAACATCCCTATACAACCATTGATACTATATTTAAACCTTATCCTGCTGGTTGTATTTGTTATATTCAAGTTCACTTCCAGATTGCTGTAATTTCAAAAGTGAATAAATTGTAAATGTATAATTGACTTCTAAAGCTGTTAAAATGGTTCAAATTGCTAGGAATGAAAAGTATGTATCCTTGCACTTATATATTTGTTTATCTCTTGAAAAATATCTGCTCTGATAAGGTCCTGTATGAGTTCAGGTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACGGTACGACATACTGCATTCCTCAATTTGAACATACTTGCACATTTAGTTGGCTAGTTCTCTGATTGAGAAGAGGGTAAGGAAGGATCGAATATTGGTAGCTTCTCGTTTGACAAGTTGGAAAAAGAAACATATGCATTTGTTTATTGTTGTGTACAGGTTTATTTGCTCTCCACTACTAGATTTTGCTTCTTTTCTCTCCTATATGTTTTCCCTTTAAAAAAGAACCTAACTTAAGTCAGTGTAGACAAGTGAATTTTGAAGACTCTTTCTGGACTCATGAACAACTTTTCTAGCTTCCAGAATTCAATGGTCTACAATTCTTTTCAGGCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGATCAGTGAGATACGATTATACCAA</genome_strand>
        <mrna_strand>GACCCCTAAAACCTCCACAGCCTGCAAAACCTCATCTCACCCCCACGCCACCCCACCCCACCCCAACCCCTTCTGCTTACAAGATGTCCCTCTCAATGTGTTCACCTTTATACTCTCCATTAAAGCTTTCTTTCAAG......................................................................................................GAAGATAAAGGAAAGGGTAATTCTTGGGGATTGAGGCAAAGTTTAGGGAAGAAGAAATTGATGGTGGTGAGAGCTGGCCCAAAGAGAATAGCTTTTGATAAAGAATGCAGAAGAGCTTTACTTTCTGGTATCAATAAGCTTGCTGATGCTGTTTCTGTCACTTTAGGACCTAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGAACGTAGTTCTCTCTGAAGCTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAG............................................................................................GTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTATTAGCTGTTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAG..................................................................................................CCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAG.................................................................................................................................................................................................................................................................GCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAAGGTGTATTACAAGACATTGCCATGTTGACAG....................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGATTTTCTTTCTGGAGACTTAGGCCTGACTCTTGAAAGTGCAACCTCCGATCAGCTTGGTATTGCTCGGAAAATAACAATAACAAGTAACTCTACAACCATCGTGGCTCACCCCTCGACAAAAGCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAG......................................................................................................................................................................................................................................................................................GTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACG.......................................................................................................................................................................................................................................................................................................................................GCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGATCAGTGAGATACGATTATACCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354467" ref_strand="+" ref_description="SGN-E354467 [cTOS-17-F4]">
      <seq>atgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctccgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttccttatgttcctggtataactccttaaaagttcgaaggataaaccttggtcgaagcactagacaaggaagtttcaattcatgatgttgtcttacaagggaagttctggtttgccactttgacttggatgagatatttagaagagttgaaaatcttgtgtccagctgaaactagagattgtctcattgcagataaaattgcttccagacacgagcattttctagcctcgactcttggtaggaaaatatagttaatcctcaagcatacaggaactgttttgatcccaatagcacagtcatcttgtttcagtagtacttgttcctgcaggcggaggattgtcattttcagggttctattagtattttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="10358" stop="9237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10058" g_stop="9537" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E354467" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10058" e_stop="9537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGA</genome_strand>
        <mrna_strand>ATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGGTTCTATTAGTATTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E701110" ref_strand="+" ref_description="SGN-E701110 [FA15AC03]">
      <seq>aataaatctatatcagagaagctttcacaaagaatagcaaaactctctggtggtgtggctatattgaaggtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgcaaaaagtgccacatttgctgccatggatgaaggaatagtgcctggtggtggtgccacttttattcatctttctgaacaaatacccttgataaaagaatcttttcaggatccagatgagcagatcggtgctgacataataggaacggcacttcttgcaccagcaaagttaatagctgcaaatgcaggagtggatggggatacagttgtggaaaaagttagaggttgtgactggaaaatggggtataacgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctccgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttccttatgttcctggtataactccttaaaagttcgaaggataaaccttggtcgaagcactagacaaggaagtttcaattcatgatgttgtcttacaagggaagttctggtttgccactttgacttggatgagatatttagaagagttgaaaatcttgtgtccagctgaaactagagattgtctcattgcagataaaattgcttccagacacgagcattttctagcctcgactcttggtaggaaaatatagttaatcctcaagcatacaggaactgttttgatcccaatagcacagtcatcttgtttcagtagtacttgttcctgcaggcggaggaatgtcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="11338" stop="9260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11038" g_stop="10970" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10969" i_stop="10692" i_length="278">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10691" g_stop="10491" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="270" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10490" i_stop="10164" i_length="327">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10163" g_stop="9560" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="874" r_length="604" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E701110" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11038" e_stop="10970"/>
          <exon e_start="10691" e_stop="10491"/>
          <exon e_start="10163" e_stop="9560"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAGGTCTGTATTAATTAAGGTGTAGTGTTTTGGATCAAACATCCCTATACAACCATTGATACTATATTTAAACCTTATCCTGCTGGTTGTATTTGTTATATTCAAGTTCACTTCCAGATTGCTGTAATTTCAAAAGTGAATAAATTGTAAATGTATAATTGACTTCTAAAGCTGTTAAAATGGTTCAAATTGCTAGGAATGAAAAGTATGTATCCTTGCACTTATATATTTGTTTATCTCTTGAAAAATATCTGCTCTGATAAGGTCCTGTATGAGTTCAGGTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACGGTACGACATACTGCATTCCTCAATTTGAACATACTTGCACATTTAGTTGGCTAGTTCTCTGATTGAGAAGAGGGTAAGGAAGGATCGAATATTGGTAGCTTCTCGTTTGACAAGTTGGAAAAAGAAACATATGCATTTGTTTATTGTTGTGTACAGGTTTATTTGCTCTCCACTACTAGATTTTGCTTCTTTTCTCTCCTATATGTTTTCCCTTTAAAAAAGAACCTAACTTAAGTCAGTGTAGACAAGTGAATTTTGAAGACTCTTTCTGGACTCATGAACAACTTTTCTAGCTTCCAGAATTCAATGGTCTACAATTCTTTTCAGGCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTT</genome_strand>
        <mrna_strand>AATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAG......................................................................................................................................................................................................................................................................................GTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACG.......................................................................................................................................................................................................................................................................................................................................GCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGAATGTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339136" ref_strand="+" ref_description="SGN-E339136 [cTOF-6-O10]">
      <seq>ttttattcatctttctgaacaaatacccttgataaaagaatcttttcaggatccagatgagcagatcggtgctgacataataggaacggcacttcttgcaccagcaaagttaatagctgcaaatgcaggagtggatggggatacagttgtggaaaaagttagaggttgtgactggaaaatggggtataacgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctccgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttccttatgttcctggtataactccttaaaagttcgaaggataaaccttggtcgaagcactagacaaggaagtttcaattcatgatgttgtcttacaagggaagttctggtttgccactttgacttggatgagatatttagaagagttgaaaatcttgtgtccagctgaaactagagattgtctcattgcagataaaattgcttccagacacgagcattttctagcctcgactcttggtaggaaaatatagttaatcctcaagcatacaggaactgtttttgatcccaatagcacagtcatcttgtttcagtagtacttgttcctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="10878" stop="9279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10578" g_stop="10491" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10490" i_stop="10164" i_length="327">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10163" g_stop="9579" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="674" r_length="586" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E339136" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10578" e_stop="10491"/>
          <exon e_start="10163" e_stop="9579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACGGTACGACATACTGCATTCCTCAATTTGAACATACTTGCACATTTAGTTGGCTAGTTCTCTGATTGAGAAGAGGGTAAGGAAGGATCGAATATTGGTAGCTTCTCGTTTGACAAGTTGGAAAAAGAAACATATGCATTTGTTTATTGTTGTGTACAGGTTTATTTGCTCTCCACTACTAGATTTTGCTTCTTTTCTCTCCTATATGTTTTCCCTTTAAAAAAGAACCTAACTTAAGTCAGTGTAGACAAGTGAATTTTGAAGACTCTTTCTGGACTCATGAACAACTTTTCTAGCTTCCAGAATTCAATGGTCTACAATTCTTTTCAGGCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTG-TTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGC</genome_strand>
        <mrna_strand>TTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACG.......................................................................................................................................................................................................................................................................................................................................GCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E427942" ref_strand="+" ref_description="SGN-E427942 [STM-49-I22]">
      <seq>atcgtggctcacccctcgacaaaagctgaaatacaagccagaataatgcagataaagaaggatcttgcagaaacagataataaatctatatcagagaagctttcacaaagaatagcaaaactctctggtggtgtggctatattgaaggtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgcaaaaagtgccacatttgctgccatggatgaaggaatagtgcctggtggtggtgccacttttattcatctttctgaacaagtacccttgataaaagtatcttttcaggatccagatgagcagatcggtgctgacataataggaacggcacttcttgcaccagcaaagctaatagctgcaaatgcaggagtggatggagatacagttgtggaaaaagttagaggttgtgactggaaaatggggtataatgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctctgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttcctcatattcctggtataagtccttnaaaggatgaaggataaacctttggtcaaagcactggacaaggaagttccaatttatgttgttgtcttaaaaggcaagctctggtttgccactttgacttggatgagacgttggaaagagttgaaattcttgtttccagctgatactagagattgtgctcattgcagataaaattgcttccagatacgagcattttctagccttgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="11416" stop="9371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11116" g_stop="10970" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10969" i_stop="10692" i_length="278">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10691" g_stop="10491" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="348" r_length="201" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10490" i_stop="10164" i_length="327">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10163" g_stop="9671" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="843" r_length="495" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E427942" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E427942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11116" e_stop="10970"/>
          <exon e_start="10691" e_stop="10491"/>
          <exon e_start="10163" e_stop="9671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGTGGCTCACCCCTCGACAAAAGCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAGGTCTGTATTAATTAAGGTGTAGTGTTTTGGATCAAACATCCCTATACAACCATTGATACTATATTTAAACCTTATCCTGCTGGTTGTATTTGTTATATTCAAGTTCACTTCCAGATTGCTGTAATTTCAAAAGTGAATAAATTGTAAATGTATAATTGACTTCTAAAGCTGTTAAAATGGTTCAAATTGCTAGGAATGAAAAGTATGTATCCTTGCACTTATATATTTGTTTATCTCTTGAAAAATATCTGCTCTGATAAGGTCCTGTATGAGTTCAGGTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACGGTACGACATACTGCATTCCTCAATTTGAACATACTTGCACATTTAGTTGGCTAGTTCTCTGATTGAGAAGAGGGTAAGGAAGGATCGAATATTGGTAGCTTCTCGTTTGACAAGTTGGAAAAAGAAACATATGCATTTGTTTATTGTTGTGTACAGGTTTATTTGCTCTCCACTACTAGATTTTGCTTCTTTTCTCTCCTATATGTTTTCCCTTTAAAAAAGAACCTAACTTAAGTCAGTGTAGACAAGTGAATTTTGAAGACTCTTTCTGGACTCATGAACAACTTTTCTAGCTTCCAGAATTCAATGGTCTACAATTCTTTTCAGGCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACC-TTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGT-CTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTC</genome_strand>
        <mrna_strand>ATCGTGGCTCACCCCTCGACAAAAGCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAG......................................................................................................................................................................................................................................................................................GTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAGTACCCTTGATAAAAGTATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACG.......................................................................................................................................................................................................................................................................................................................................GCACTTCTTGCACCAGCAAAGCTAATAGCTGCAAATGCAGGAGTGGATGGAGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAATGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCTGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTCATATTCCTGGTATAAGTCCTTNAAAGGATGAAGGATAAACCTTTGGTCAAAGCACTGGACAAGGAAGTTCCAATTTATGTTGTTGTCTTAAAAGGCAAGCTCTGGTTTGCCACTTTGACTTGGATGAGACGTTGGAAAGAGTTGAAATTCTTGTTTCCAGCTGATACTAGAGATTGTGCTCATTGCAGATAAAATTGCTTCCAGATACGAGCATTTTCTAGCCTTGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E478186" ref_strand="+" ref_description="SGN-E478186 [cSTD-3-F9]">
      <seq>atcgtggctcacccctcgacaaaagctgaaatacaagccagaataatgcagataaagaaggatcttgcagaaacagataataaatctatatcagagaagctttcacaaagaatagcaaaactctctggtggtgtggctatattgaaggtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgcaaaaagtgccacatttgctgccatggatgaaggaatagtgcctggtggtggtgccacttttattcatctttctgaacaagtacccttgataaaagtatcttttcaggatccagatgagcagatcggtgctgacataataggaacggcacttcttgcaccagcaaagctaatagctgcaaatgcaggagtggatggagatacagttgtggaaaaagttagaggttgtgactggaaaatggggtataatgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctctgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttcctcatattcctggtataagtccttaaaaggatgaaggataaacctttggtcaaagcactggacaaggaagttccaatttatgttgttgtcttaaaaggcaagctctggtttgccactttgacttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="11416" stop="9476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11116" g_stop="10970" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10969" i_stop="10692" i_length="278">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10691" g_stop="10491" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="348" r_length="201" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10490" i_stop="10164" i_length="327">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10163" g_stop="9776" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="737" r_length="389" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E478186" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11116" e_stop="10970"/>
          <exon e_start="10691" e_stop="10491"/>
          <exon e_start="10163" e_stop="9776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGTGGCTCACCCCTCGACAAAAGCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAGGTCTGTATTAATTAAGGTGTAGTGTTTTGGATCAAACATCCCTATACAACCATTGATACTATATTTAAACCTTATCCTGCTGGTTGTATTTGTTATATTCAAGTTCACTTCCAGATTGCTGTAATTTCAAAAGTGAATAAATTGTAAATGTATAATTGACTTCTAAAGCTGTTAAAATGGTTCAAATTGCTAGGAATGAAAAGTATGTATCCTTGCACTTATATATTTGTTTATCTCTTGAAAAATATCTGCTCTGATAAGGTCCTGTATGAGTTCAGGTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACGGTACGACATACTGCATTCCTCAATTTGAACATACTTGCACATTTAGTTGGCTAGTTCTCTGATTGAGAAGAGGGTAAGGAAGGATCGAATATTGGTAGCTTCTCGTTTGACAAGTTGGAAAAAGAAACATATGCATTTGTTTATTGTTGTGTACAGGTTTATTTGCTCTCCACTACTAGATTTTGCTTCTTTTCTCTCCTATATGTTTTCCCTTTAAAAAAGAACCTAACTTAAGTCAGTGTAGACAAGTGAATTTTGAAGACTCTTTCTGGACTCATGAACAACTTTTCTAGCTTCCAGAATTCAATGGTCTACAATTCTTTTCAGGCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACC-TTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGA</genome_strand>
        <mrna_strand>ATCGTGGCTCACCCCTCGACAAAAGCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAG......................................................................................................................................................................................................................................................................................GTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAGTACCCTTGATAAAAGTATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACG.......................................................................................................................................................................................................................................................................................................................................GCACTTCTTGCACCAGCAAAGCTAATAGCTGCAAATGCAGGAGTGGATGGAGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAATGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCTGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTCATATTCCTGGTATAAGTCCTTAAAAGGATGAAGGATAAACCTTTGGTCAAAGCACTGGACAAGGAAGTTCCAATTTATGTTGTTGTCTTAAAAGGCAAGCTCTGGTTTGCCACTTTGACTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E231166" ref_strand="+" ref_description="SGN-E231166 [cLED-5-C2]">
      <seq>ggatggggatacagttgtggaaaaagttagaggttgtgactggaaaatggggtataacgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctccgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaaccccttgttccttatgttcctggtataactccttaaaagttcgaaggataaaccttggtcgaagcactagacaaggaagtttcaattcatgatgttgtcttacaaggggaagttctggntttgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="10419" stop="9488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10119" g_stop="9788" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E231166" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10119" e_stop="9788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAA-GGGAAGTTCTGG-TTTGCCA</genome_strand>
        <mrna_strand>GGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGGAAGTTCTGGNTTTGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E605934" ref_strand="+" ref_description="SGN-E605934 [21867]">
      <seq>gcagataaagaaggatcttgcagaaccagataataaatctatatcagagaagcttcacaaagaatagcaaaactctctggtggtgtggctatattgaaggtaggagcacatactgaaacagaactggaagaccgaaagctgagaattgaggatgcaaaaaatgccacatttgctgccatggatgaaggaatagtgcctggtggtggtgccacttttattcatctttctgaacaagtacccttgataaaagaatcttttcaggatccagatgagcagatcggtgctgacataataggaacggcacttcttgcaccagcaaagctaatagctgcaaatgcaggagtggatggagatacagttgtggaaaaagttagaggctgtgactggaaaatggggtataatgccatgactggaagatatgaagaccttcttgcttctggtattattgatccttgccgtgtttcacgatgtgcccttcagaatgctgtctctgttgccggtatagtcctaactactcaagcaataatggtagagaaaaccaaggagcccaaatcccttgtttcctcatattcctggtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="11369" stop="9585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11069" g_stop="10970" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10969" i_stop="10692" i_length="278">
            <donor d_prob="0.914" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10691" g_stop="10491" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="300" r_length="201" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10490" i_stop="10164" i_length="327">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10163" g_stop="9885" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="580" r_length="280" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E605934" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E605934" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11069" e_stop="10970"/>
          <exon e_start="10691" e_stop="10491"/>
          <exon e_start="10163" e_stop="9885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAGGTCTGTATTAATTAAGGTGTAGTGTTTTGGATCAAACATCCCTATACAACCATTGATACTATATTTAAACCTTATCCTGCTGGTTGTATTTGTTATATTCAAGTTCACTTCCAGATTGCTGTAATTTCAAAAGTGAATAAATTGTAAATGTATAATTGACTTCTAAAGCTGTTAAAATGGTTCAAATTGCTAGGAATGAAAAGTATGTATCCTTGCACTTATATATTTGTTTATCTCTTGAAAAATATCTGCTCTGATAAGGTCCTGTATGAGTTCAGGTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACGGTACGACATACTGCATTCCTCAATTTGAACATACTTGCACATTTAGTTGGCTAGTTCTCTGATTGAGAAGAGGGTAAGGAAGGATCGAATATTGGTAGCTTCTCGTTTGACAAGTTGGAAAAAGAAACATATGCATTTGTTTATTGTTGTGTACAGGTTTATTTGCTCTCCACTACTAGATTTTGCTTCTTTTCTCTCCTATATGTTTTCCCTTTAAAAAAGAACCTAACTTAAGTCAGTGTAGACAAGTGAATTTTGAAGACTCTTTCTGGACTCATGAACAACTTTTCTAGCTTCCAGAATTCAATGGTCTACAATTCTTTTCAGGCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTG-TTCCTTATGTTCCTGGTATA</genome_strand>
        <mrna_strand>GCAGATAAAGAAGGATCTTGCAGAACCAGATAATAAATCTATATCAGAGAAGC-TTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAG......................................................................................................................................................................................................................................................................................GTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAATGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAGTACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACG.......................................................................................................................................................................................................................................................................................................................................GCACTTCTTGCACCAGCAAAGCTAATAGCTGCAAATGCAGGAGTGGATGGAGATACAGTTGTGGAAAAAGTTAGAGGCTGTGACTGGAAAATGGGGTATAATGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCTGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAATCCCTTGTTTCCTCATATTCCTGGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E391756" ref_strand="+" ref_description="SGN-E391756 [TUS-24-I6]">
      <seq>ttgattttggcgctaaccctgtatctatgaagaaaggtatggatcagacagtaagagagctggtcaatactttgaagaagaaaagtcatcctgttagaggaaatgatgatataaaagccgtagcttcaatatcagctggaaatgacgagttcattggcagtttgattgctgaggcaattaacaagattggtcctgatggagtgatatgtattgagtcttcctcatcagctgaaacctcgatcatggttgaagaaggaatgaaggcgttcttttcctacagattgacaaggggtacatgtcacctcatttcatcaacaatcccgaaaaatctatagtagagtttgaaaatgccaaagttctggtaaccgatcaaaagatatgtagtgtcaaagaaattgttcctttgctagagaaggccactcaactgagtgtgccactgctgatttttgctgaggacattacaaaccaagtgctagaaacacttgtcattaacaagatgcaaggaatgctcaatgttgctgttgtgcaatgtccaggatttcgagatggaaagaaaggtgtattacaagacatttgccatgttgacaggtgctgattttctttctggaaacttaggcctgactctttaaagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="12850" stop="10876"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12550" g_stop="12434" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12433" i_stop="12336" i_length="98">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12335" g_stop="12190" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="263" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12189" i_stop="11933" i_length="257">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11932" g_stop="11609" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="588" r_length="325" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11608" i_stop="11221" i_length="388">
            <donor d_prob="0.837" d_score="0.96"/>
            <acceptor a_prob="0.672" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11220" g_stop="11176" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="633" r_length="45" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E391756" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12550" e_stop="12434"/>
          <exon e_start="12335" e_stop="12190"/>
          <exon e_start="11932" e_stop="11609"/>
          <exon e_start="11220" e_stop="11176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAGGTAACTTGCTTTATCTTTATATTGAAGTCAGAAAATTTCTCATTCACTTCAAGAAAAAAATTAATGATTTGATCTCTTTCTCTTCTTACTATGTGCAGCCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAGGTAATATATGCTCTTCAAAGTGTTAGTGTTTGACTTCAATTTCTGTACTGATAAATAAGCTATCTGGTAAAACATGATCCCACCTGAACTTTTCCAAGACTTTCAGGTTTGAAGCAAATCTGAAAGCTCAAACAAAGTGCCTACTAAAAAAATTAACCTCTAGTTATCCATTTATATTTTAAAGCTAATTTCGCCACTTCATATGTAAAATTCTTTTTCTTCCATTTGTTTTCATTATTTTCTTGATTTGTATTCAGGCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAAGGTGTATTACAAGACA-TTGCCATGTTGACAGGTGAGCCAAATACTTTATTCTGAATTATTGAAGAGGTTAATACATGTGCCCAAACCCAAAAAAAGGGTGTCGAAATGGAGAGAGTGAACAGTAGTTTTAACTTTAAACTCATCTTGAGGATAGATTAGAAACTAGGTGATATCCACAGTGCATGTGTACACAGTTTTCTGGAATGCTTACGTACAAATACATTGATTTTAAGTTCGCCAAATCAGTTATTTCTGTAATGTACGTTGCTCGAGCAATGCTCACAAAAGGGGTTTGCCCTTAACTACTAATACTTTTGTATGCTGTATTGGATTCTCAAGACCTAGTGTTGCCCCAAGCGAAAATTATCTGCGAAGATCTCCTTTACCATGACATCTAACTGGCATTATAATGCAATTAGGTGCTGATTTTCTTTCTGGAGACTTAGGCCTGACTCTTGAAAGTG</genome_strand>
        <mrna_strand>TTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAG..................................................................................................CCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAG.................................................................................................................................................................................................................................................................GCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAAGGTGTATTACAAGACATTTGCCATGTTGACAG....................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGATTTTCTTTCTGGAAACTTAGGCCTGACTCTTTAAAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E607573" ref_strand="+" ref_description="SGN-E607573 [23542]">
      <seq>tgttagctgttgattttggggctaaccctgtatctatgaagaaaggtatggatcagacagtaagagagctggtcaaaactttgaagaagaaaagtcatcctgttagaggaaatgatgatataaaagccgtagcttcaatatctgctggaaatgacgagttcattggcagtttgattgctgaggtcctaattaagaagattggtcctgatggagtgatatgtattgagtcttcctcatcagctgaaacctcgatcatggttgaagaaggaatgaagattgacaaggggtacatgtcacctcatttcatcaacaatcccgacaaatctatagtagagtttgaaaatgccaaagttctggtaactgatcaaaagatatctagtgtcaaagaaattgttcctttgctagagaaggtgactcaactgagtgtgccactgctgatttttgctgaggacatttcaaagcaagtgctagaaacactagtcattaacaagatgcaaggaatgctcagtgttgctgttgtgcaatgtccaggatttcgagatggaaagaagggtgtattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="12859" stop="11330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12559" g_stop="12434" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12433" i_stop="12336" i_length="98">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12335" g_stop="12190" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="275" r_length="149" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12189" i_stop="11916" i_length="274">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11915" g_stop="11630" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="561" r_length="286" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E607573" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E607573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12559" e_stop="12434"/>
          <exon e_start="12335" e_stop="12190"/>
          <exon e_start="11915" e_stop="11630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTAGCTGTTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAGGTAACTTGCTTTATCTTTATATTGAAGTCAGAAAATTTCTCATTCACTTCAAGAAAAAAATTAATGATTTGATCTCTTTCTCTTCTTACTATGTGCAGCCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGG--C-AATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAGGTAATATATGCTCTTCAAAGTGTTAGTGTTTGACTTCAATTTCTGTACTGATAAATAAGCTATCTGGTAAAACATGATCCCACCTGAACTTTTCCAAGACTTTCAGGTTTGAAGCAAATCTGAAAGCTCAAACAAAGTGCCTACTAAAAAAATTAACCTCTAGTTATCCATTTATATTTTAAAGCTAATTTCGCCACTTCATATGTAAAATTCTTTTTCTTCCATTTGTTTTCATTATTTTCTTGATTTGTATTCAGGCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAAGGTGTATTAC</genome_strand>
        <mrna_strand>TGTTAGCTGTTGATTTTGGGGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAAAACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAG..................................................................................................CCGTAGCTTCAATATCTGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGTCCTAATTAAGAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAG..................................................................................................................................................................................................................................................................................ATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGACAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACTGATCAAAAGATATCTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGTGACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTTCAAAGCAAGTGCTAGAAACACTAGTCATTAACAAGATGCAAGGAATGCTCAGTGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAGGGTGTATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247640" ref_strand="+" ref_description="SGN-E247640 [cLEF-42-N16]">
      <seq>tgattttggcgctaaccctgtatctatgaagaaaggtgtggatcanacaggaagagagctggtcaatactttgaagaagaaaagtcatcctgttagaggaaatgatgatataaaagccgtagcttcaatatcagctggaaatgacgagttcattggcagtttgattgctgaggcaattaacaagattggtcctgatggagtgatatgtattgagtcttcctcatcagctgaaacctcgatcatggttgaagaaggaatgaaggcgttcttttcctacagattgacaaggggtacatgtcacctcatttcatcaacaatcccgaaaaatctatagtagagtttgaaaatgccaaagttctggtaaccgatcaaaagatatgtagtgtcaaagaaattgttcctttgctagagaaggccactcaactgagtgtgccactgctgatttttgctgaggacattacaaaccaagtgctagaaacacttgtcattaacaagatgcaaggaatgctcaatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="12849" stop="11378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12549" g_stop="12434" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12433" i_stop="12336" i_length="98">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12335" g_stop="12190" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="262" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12189" i_stop="11933" i_length="257">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11932" g_stop="11678" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="517" r_length="255" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E247640" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12549" e_stop="12434"/>
          <exon e_start="12335" e_stop="12190"/>
          <exon e_start="11932" e_stop="11678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAGGTAACTTGCTTTATCTTTATATTGAAGTCAGAAAATTTCTCATTCACTTCAAGAAAAAAATTAATGATTTGATCTCTTTCTCTTCTTACTATGTGCAGCCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAGGTAATATATGCTCTTCAAAGTGTTAGTGTTTGACTTCAATTTCTGTACTGATAAATAAGCTATCTGGTAAAACATGATCCCACCTGAACTTTTCCAAGACTTTCAGGTTTGAAGCAAATCTGAAAGCTCAAACAAAGTGCCTACTAAAAAAATTAACCTCTAGTTATCCATTTATATTTTAAAGCTAATTTCGCCACTTCATATGTAAAATTCTTTTTCTTCCATTTGTTTTCATTATTTTCTTGATTTGTATTCAGGCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTG</genome_strand>
        <mrna_strand>TGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTGTGGATCANACAGGAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAG..................................................................................................CCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAG.................................................................................................................................................................................................................................................................GCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573399" ref_strand="+" ref_description="SGN-E573399 [32704]">
      <seq>gccggaacgtagttctctctgaagctggggggctgaaaataattaatgatggtgttaccatagctcaagccatagaacttccagatacaattgaaaatgctggagcgacacttatccaggaggttgcaactaagaccaacaggttagctggtgacggtacaactactgcaattgttttggcccgtgagatgatcaaagctgggttgttagctgttgattttggggctaaccctgtatctatgaagaaaggtatggatcagacagtaagagagctggtcaaaactttgaagaagaaaagtcatcctgttagaggaaatgatgatataaaagccgtagcttcaatatctgctggaaatgacgagttcattggcagtttgattgctgaggcaattaagaagattggtcctgatggagtgatatgtattgagtcttcctcatcagctgaaacctcgatcatggttgaagaaggaatgaagattgacaaggggtacatgtcacctcatttcatcaacaatcccgacaaatctatagtagagtttgaaaatgccaaagttctggtaactgatcaaaagatatctagtgtcaaagaaattgttcctttgctagagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="13155" stop="11482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12855" g_stop="12734" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12733" i_stop="12642" i_length="92">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12641" g_stop="12434" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="330" r_length="208" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12433" i_stop="12336" i_length="98">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12335" g_stop="12190" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="476" r_length="146" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12189" i_stop="11916" i_length="274">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11915" g_stop="11782" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="610" r_length="134" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E573399" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12855" e_stop="12734"/>
          <exon e_start="12641" e_stop="12434"/>
          <exon e_start="12335" e_stop="12190"/>
          <exon e_start="11915" e_stop="11782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCGGAACGTAGTTCTCTCTGAAGCTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAGGTTATTAGTTGAGCCTACACTGAGCATGATTTGGGTCTTTGAATAGTGTTTGAAAAACTCTTAATCTTGTAAATATTTTTTATCTATTGCAGGTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTATTAGCTGTTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAGGTAACTTGCTTTATCTTTATATTGAAGTCAGAAAATTTCTCATTCACTTCAAGAAAAAAATTAATGATTTGATCTCTTTCTCTTCTTACTATGTGCAGCCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAGGTAATATATGCTCTTCAAAGTGTTAGTGTTTGACTTCAATTTCTGTACTGATAAATAAGCTATCTGGTAAAACATGATCCCACCTGAACTTTTCCAAGACTTTCAGGTTTGAAGCAAATCTGAAAGCTCAAACAAAGTGCCTACTAAAAAAATTAACCTCTAGTTATCCATTTATATTTTAAAGCTAATTTCGCCACTTCATATGTAAAATTCTTTTTCTTCCATTTGTTTTCATTATTTTCTTGATTTGTATTCAGGCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAA</genome_strand>
        <mrna_strand>GCCGGAACGTAGTTCTCTCTGAAGCTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAG............................................................................................GTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTGTTAGCTGTTGATTTTGGGGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAAAACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAG..................................................................................................CCGTAGCTTCAATATCTGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAAGAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAG..................................................................................................................................................................................................................................................................................ATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGACAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACTGATCAAAAGATATCTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E364858" ref_strand="+" ref_description="SGN-E364858 [cLPT-4-D23]">
      <seq>gcaaaacctcatctcccccccccccccttctcgttacaagatgtctctctcaatgtgttcacctttatactctccatttaagctttctttcaaggaagataaaggaaaggttaattcttggggattgaggcaaagtttagggaagaagaaattgatggtggtgagagctggcccaaagagaatagcttttgataaagaatgcagaagagctttactttctggtatcaataagcttgctgatgctgtttctgtcactttaggacctagaggccggaacgtagttctctctgaaggtggggggctgaaaataattaatgatggtgttaccatagctcaagccatagaacttccagatacaattgaaaatgctggagcgacacttatccaggaggttgcaactaagaccaacaggttagctggtgacggtacaactactgcaattgttttggcccgtgagatgatcaaagctgggttattagctgttgattttggggctaaccctgtatctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="14716" stop="12223"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14424" g_stop="14329" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.844"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14328" i_stop="14227" i_length="102">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14226" g_stop="14052" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="269" r_length="175" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14051" i_stop="12856" i_length="1196">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12855" g_stop="12734" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="391" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12733" i_stop="12642" i_length="92">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12641" g_stop="12523" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="510" r_length="119" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E364858" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14424" e_stop="14329"/>
          <exon e_start="14226" e_stop="14052"/>
          <exon e_start="12855" e_stop="12734"/>
          <exon e_start="12641" e_stop="12523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACGCCACCCCACCCCACCCCAACCCCTTCTGCTTACAAGATGTCCCTCTCAATGTGTTCACCTTTATACTCTCCATTAAAGCTTTCTTTCAAGGTAACTCTCTCATAATACAGTCAATTCTTTGTAAAAATGTTTAAAGTTGTTGTTTTTGGCTGTTTTTTTTGTATATATTTTGTTCTTGACTTGTTTTTTCAGGAAGATAAAGGAAAGGGTAATTCTTGGGGATTGAGGCAAAGTTTAGGGAAGAAGAAATTGATGGTGGTGAGAGCTGGCCCAAAGAGAATAGCTTTTGATAAAGAATGCAGAAGAGCTTTACTTTCTGGTATCAATAAGCTTGCTGATGCTGTTTCTGTCACTTTAGGACCTAGAGGTATAATGGGTTTTCCTCCTTCTTTGGAAAAAAAATTAGACTTGTTATATAGACATTAGAGGAAATGGAAAATGAAGATGATGGGAACAAAGTTGTTGGTTTATTTTTGATCCTGAGTCAAAATTGTGTGCTCGAGTGAGCTCTAGGCGACCTAGTTAGGAGAGGTTAATAGTTTGTTCTGACAGATTTCTAAAATCAGCTTAATTGCGAAAGTGTTTTTCAGAAAAGTACAACAACAACATGCCCCCATGAAATCCCACAAAGTGCTCTGGAGTGTGTAGAGCATACACAGACCTTAGCCCTGCCTTGTGGATATAGAGAAGCTGGTTTTGGAAGTTCCTCGGCTCGAATGTGCTTATCACAAAAGTACTTTTGTTAAGAAATAGATTGTGTTTGGCCATAAATCTAAAAACACTTTTGTCGTTTGGCCAAGCTTCCTAAAAGTGTTTCTAAGTGTTTTTGAAAAGAACTTATTTTCTCCCAAAAGTTTGATCAAACACCTCACTTTTTAAAGAGCACACATTTTTGGTAAAAATAAGCACTTATAGCCCTCCTAAAATTGGCCAAACAAGCTATAAGAAAGAGATTAGAAGATCCACTAATTTTGTTGTGATGGTTAACAGAAATTAAAGAATTACTTCTTCTCTTATCTTCTGAAAAGAAGAATTCTTTTCAATGTTATAAGCACAGAAACATATTACTTCCTCCTAGAATACAGTTTATCGTGGGACATTTAATTTGTGAAACAAAACCTTTCAAAGAGTAGGATTTGCAACATTTTGTTGGTGGTTTTCTTCAGGTTAAGGCACACTATATTTGTTCAATCTTATGTCTACAGCAAGGCATGATTTTCTAATACTTGTATTGGAGTGCTTGTTTGGATTACCCCATGAAATTGTGGGGGAAAAAACTTTTTAGTGATTTCCTCAAAAAGTTGTATTCTGTATATGGATTTTTGAAAATTATTTACTTAGATTATGACATGAGTTCTCTTTTATCATGTGTACATCCTTTGTGCAACTGATATGTTACCTTTCTCCAAATAAAATAAAACATGATTGGAAGAAATTAGTTGGTATGCACTTGAACTTTTGCTTATCAATCAAATATGTATGAGGAGCTTATTTTTAGACATAGTGTATATGCTGTCTGCCTGCTTGTTTTAGATTTAGATGATTGTGTGACAAATTATGCAGGCCGGAACGTAGTTCTCTCTGAAGCTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAGGTTATTAGTTGAGCCTACACTGAGCATGATTTGGGTCTTTGAATAGTGTTTGAAAAACTCTTAATCTTGTAAATATTTTTTATCTATTGCAGGTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTATTAGCTGTTGATTTTGGCGCTAACCCTGTATCTAT</genome_strand>
        <mrna_strand>GCAAAACCTCATCTCCCC-CCCC-CCCCCTTCTCGTTACAAGATGTCTCTCTCAATGTGTTCACCTTTATACTCTCCATTTAAGCTTTCTTTCAAG......................................................................................................GAAGATAAAGGAAAGGTTAATTCTTGGGGATTGAGGCAAAGTTTAGGGAAGAAGAAATTGATGGTGGTGAGAGCTGGCCCAAAGAGAATAGCTTTTGATAAAGAATGCAGAAGAGCTTTACTTTCTGGTATCAATAAGCTTGCTGATGCTGTTTCTGTCACTTTAGGACCTAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGGAACGTAGTTCTCTCTGAAGGTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAG............................................................................................GTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTATTAGCTGTTGATTTTGGGGCTAACCCTGTATCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702243" ref_strand="+" ref_description="SGN-E702243 [FA18AG06]">
      <seq>aaaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgacggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttggcagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcctgtttcagggaaggtagtggaatttaatgaggaactgaacaacggtcctgctctgatcaatgcaaactgctatgaacaaggatggattttgaaagttgagatgaacaaacccgacgaggtcaaagcattgatggaccctgaccagtataccaagttttgtgacgaggaagacgcgaagcactgatttgaaacctcaccaaagttgagcaagaacacaattccctgcaggattttttcacaatgcataaagaggctttattcctaagccccggaagctggatactaagtagtgctatttggtctttgatacaacaactgtttaccccctgcagttcttctctttctttgcaaataattcagtgtttttggatgttgaacttcatctaggttaaattcaagtttttcatctcttctggcattgcatttataaattcctaaacacccttcagaatatttttttttacaaggcatagttgatgtggtaaaataatattgctcnaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19334" stop="15034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19034" g_stop="18953" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="342" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15335" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="786" r_length="444" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="787" polyA_stop="798"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E702243" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702243" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19034" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15335"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAATTCAAGTTTTTCATCTCTTCTGGCATTGCATTTATAAATTCCTAAACACCCTTCAGAATA-TTTTTTTTACAAGGCATAGTTGATGTGGTAAAATAATATTGCTCA</genome_strand>
        <mrna_strand>AAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAATTCAAGTTTTTCATCTCTTCTGGCATTGCATTTATAAATTCCTAAACACCCTTCAGAATATTTTTTTTTACAAGGCATAGTTGATGTGGTAAAATAATATTGCTCN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E622431" ref_strand="-" ref_description="SGN-E622431 [72798]">
      <seq>acaaaagttgttgggctttcaaggnctgctttcatattctcaggatctcagcattttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgacggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttgacagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcctgtttcagggaaggtggtggaatttaatgaggaactcaacaacggtcctgctctgatcaatgcgaactgctatgaacaaggatggattttgaaagttgagatgaacaaacccgacgaggtcaaagcattgatggaccctgaccagtataccaaattttgtgatgaggaagacgcgaagcactgatttgaaacctcaccaaagttgagcaagaacacaatttcctgcaggaatttttcacaatgcataaagaggctttattcctaagccccggaagctggatactagtagtgctatttggtcttctctttctttgcaaataattcagtgtttttggatgttgaacttcatctaggttaaaattcaagctttcctctcttctggcattgcatttataaattcccaaacacctttcacaatattttttttaggcaaagttgatgtggtaaatgattttcctcaatatgacattaatgttgaatggtgcttttaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19322" stop="15071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19022" g_stop="18953" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.814"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="0.87"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="336" r_length="260" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15534" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="579" r_length="243" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15533" i_stop="15501" i_length="33">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15500" g_stop="15353" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="724" r_length="145" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E622431" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622431" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19022" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15534"/>
          <exon e_start="15500" e_stop="15353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AC-AAAGTTG-TGGGCT-TCAAGGGCTGC-TTCATAT-CTCAGGATCTCAGCA-TTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTT-AAATTCAAGTTTTTCATCTCTTCTGGCATTGCATTTATAAATTCCTAAACACCCTTCAGAATATTTTTTTTACAAGGCATAGTTGATGTG</genome_strand>
        <mrna_strand>ACAAAAGTTGTTGGGCTTTCAAGGNCTGCTTTCATATTCTCAGGATCTCAGCATTTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGACAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTGGTGGAATTTAATGAGGAACTCAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCGAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAATTTTGTGATGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTTCCTGCAGGAATTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACT-AGTAGTGCTATTTG.................................GTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAAATTCAAG-CTTTCCTCTCTTCTGGCATTGCATTTATAAATTCCCAAACACCTTTCACAATATTTTTTTT---AGGCAAAGTTGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E714322" ref_strand="+" ref_description="SGN-E714322 [FB11AE07]">
      <seq>caagtgttggcacagctctacatccaaagcagattcctaaaagaaaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgacggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttggcagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcctgtttcagggaaggtagtggaatttaatgaggaactgaacaacggtcctgctctgatcaatgcaaactgctatgaacaaggatggattttgaaagttgagatgaacaaacccgacgaggtcaaagcattgatggaccctgaccagtataccaagttttgtgacgaggaagacgcgaagcactgatttgaaacctcaccaaagttgagcaagaacacaattccctgcaggattttttcacaatgcataaagaggctttattcctaagccccggaagctggatactaagtagtgctatttggtctttgatacaacaactgtttaccccctgcagttcttctctttctttgcaaataattcagtgtttttggatgttgaacttcatctaggttaaattcaagtttttcatctcttctggcattgcatttataaattcctaaacacccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19377" stop="15086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19077" g_stop="18953" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="385" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15386" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="777" r_length="392" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E714322" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19077" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAATTCAAGTTTTTCATCTCTTCTGGCATTGCATTTATAAATTCCTAAACACCCTTC</genome_strand>
        <mrna_strand>CAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAATTCAAGTTTTTCATCTCTTCTGGCATTGCATTTATAAATTCCTAAACACCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E618615" ref_strand="+" ref_description="SGN-E618615 [69295]">
      <seq>tttttgcaatgccagaagagatgaaaaacttgaatttaacctaaatgaagttcaacatccaaaaacactgaattatttgcaaagaaagagaagacaaaatagcactactagtatccagcttccggggcttaggaataaagcctctttatgcattgtgaaaaattcctgcattggaattgtgttcttggctcaaatttggtgaggtttcaaatcagtgcttcgcgtcttcctcatcacaaaacttggtatactgggtcagggtccatcaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="15110" stop="16007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15406" g_stop="15498" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15499" i_stop="15531" i_length="33">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15532" g_stop="15707" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="271" r_length="178" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E618615" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>269</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E618615" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15406" e_stop="15498"/>
          <exon e_start="15532" e_stop="15707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATGCAATGCCAGAAGAGATGAAAAACTTGAATTTAACCTAGATGAAGTTCAACATCCAAAAACACTGAATTATTTGCAAAGAAAGAGAAGAACTGCAGGGGGTAAACAGTTGTTGTATCAAAGACCAAATAGCACTACTTAGTATCCAGCTTCCGGGGCTTAGGAATAAAGCCTCTTTATGCATTGTGAAAAAATCCTGCA-GGGAATTGTGTTCTT-GCTCAACTTTGGTGAGGTTTCAAATCAGTGCTTCGCGTCTTCCTCGTCACAAAACTTGGTATACT-GGTCAGGGTCCATCAATG</genome_strand>
        <mrna_strand>TTTTTGCAATGCCAGAAGAGATGAAAAACTTGAATTTAACCTAAATGAAGTTCAACATCCAAAAACACTGAATTATTTGCAAAGAAAGAGAAG.................................ACAAAATAGCACTAC-TAGTATCCAGCTTCCGGGGCTTAGGAATAAAGCCTCTTTATGCATTGTGAAAAATTCCTGCATTGGAATTGTGTTCTTGGCTCAAATTTGGTGAGGTTTCAAATCAGTGCTTCGCGTCTTCCTCATCACAAAACTTGGTATACTGGGTCAGGGTCCATCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E354115" ref_strand="+" ref_description="SGN-E354115 [cTOS-16-N7]">
      <seq>ttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgacggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttggcagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcctgtttcagggaaggtagtggaatttaatgaggaactgaacaacggtcctgctctgatcaatgcaaactgctatgaacaaggatggattttgaaagttgagatgaacaaacccgacgaggtcaaagcattgatggaccctgaccagtataccaagttttgtgacgaggaagacgcgaagcactgatttgaaacctcaccaaagttgagcaagaacacaattccctgcaggattttttcacaatgcataaagaggctttattcctaagccccggaagctggatactaagtagtgctatttggtctttgatacaacaactgtttaccccctgcagttcttctctttctttgccaatattcagtggttttggatgttgaacttcatctaggntaaatcaagtttttcatctcttctggcattgcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19296" stop="15110"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18996" g_stop="18953" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="304" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15418" g_length="360"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="662" r_length="358" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="670" polyA_stop="683"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E354115" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354115" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18996" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAATTCAAGTTTTTCATCTCTTCTG</genome_strand>
        <mrna_strand>TTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCCAAT-ATTCAGTGGTTTTGGATGTTGAACTTCATCTAGGNTAAA-TCAAGTTTTTCATCTCTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E620696" ref_strand="+" ref_description="SGN-E620696 [71400]">
      <seq>tgcaagtgttggcacagctctacatccaaaccagatacctaaaagaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgatggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttgacagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcctgtttcagggaaggtggtggaatttaatgaggaactcaacaacggtcctgctctgatcaatgcgaactgctatgaacaaggatggattttgaaagttgagatgaacaaacccgacgaggtcaaagcattgatggaccctgaccagtataccaagttttgtgatgaggaagacgcgaagcactgatttgaaacctcaccaaatttgagcaagaacacaattccaatgcaggaatttttcacaatgcataaagaggctttattcctaagccccggaagctggatactagtagtgctatttggtcttctctttctttgcaaataattcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19379" stop="15173"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19079" g_stop="18953" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="385" r_length="260" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15529" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="634" r_length="249" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E620696" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E620696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19079" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15529"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCC-CTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTT</genome_strand>
        <mrna_strand>TGCAAGTGTTGGCACAGCTCTACATCCAAACCAGATACCTAAAAG--AAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGATGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGACAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTGGTGGAATTTAATGAGGAACTCAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCGAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGATGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAATTTGAGCAAGAACACAATTCCAATGCAGGAATTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACT-AGTAGTGCTATTTGGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E560403" ref_strand="+" ref_description="SGN-E560403 [20051]">
      <seq>attttattgcttccactttcttctataactctactactacttgtactatttattttccattttcccctaatacatacaatacaagtgttggcacagctctacatccaaaccagatacctaaaagaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacaggggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgatggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttgacagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcctgtttcagggaaggtggtggaatttaatgaggaactcaacaacggtcctgctctgatcaatgcgaactgctatgaacaaggatggattttgaaagttgagatgaacaaacccgacgaggtcacaagcattgatggacccctgaccagtataccaaggtttcgtgatgaggaagacgcgaagcactgattttgaaaactcaccaaaatttgagcaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19450" stop="15320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19117" g_stop="18953" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="205" r_length="164" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="465" r_length="260" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15620" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="628" r_length="163" r_score="0.899"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E560403" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560403" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19117" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15620"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTACTTTTTATTTTCCATTTTCCCCTAATACATACAATACAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACA-GGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCA-AAGCATTGATGGACC-CTGACCAGTATACCAA-GTTTTGTGACGAGGAAGACGCGAAGCACTGA-TTTGAAACCTCACC-AAAGTTGAGCAAGAA</genome_strand>
        <mrna_strand>TGTACTATTTATTTTCCATTTTCCCCTAATACATACAATACAAGTGTTGGCACAGCTCTACATCCAAACCAGATACCTAAAAG--AAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGATGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGACAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTGGTGGAATTTAATGAGGAACTCAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCGAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCACAAGCATTGATGGACCCCTGACCAGTATACCAAGGTTTCGTGATGAGGAAGACGCGAAGCACTGATTTTGAAAACTCACCAAAATTTGAGCAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E268195" ref_strand="+" ref_description="SGN-E268195 [cLEI-15-D16]">
      <seq>tctactgtactttttattttccattttcccctaatacatacaatacaagtgttggcacagctctacatccaaagcagattcctaaaagaaaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgacggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttggcagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcctgtttcagggaaggtagtggaatttaatgaggaactgaacaacggtcctgctctgatcaatgcaaactgctatgaacaaggatggattttgaaagttgagatgaacaaacccgacgaggtcaaagcattgatggaccctgaccagtataccaagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19422" stop="15376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19122" g_stop="18953" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="430" r_length="260" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15676" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="532" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E268195" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19122" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACTGTACTTTTTATTTTCCATTTTCCCCTAATACATACAATACAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTT</genome_strand>
        <mrna_strand>TCTACTGTACTTTTTATTTTCCATTTTCCCCTAATACATACAATACAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698462" ref_strand="+" ref_description="SGN-E698462 [FA06BG03]">
      <seq>gattcctaaaagaaaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagcacacagaatctcatgaatgggttaaagttgacggcaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttggcagctttggtgctgatgaaagtgtcaaggcttccagcgatatcaattctcctgcttcagggaaggtagaggaattcaatgaggaactgaacaacggtcctgctctgatcaatgcaaactgctatgaacaaggatggattttgaaagttgagatgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19346" stop="15427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19046" g_stop="18953" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16636" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="354" r_length="260" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15777" g_stop="15727" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="405" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E698462" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19046" e_stop="18953"/>
          <exon e_start="16895" e_stop="16636"/>
          <exon e_start="15777" e_stop="15727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTGGTGAGTATCATAGATCTGTGATCCAATTGTATAGCCATATAGGTTAGAATAAAATGATGAAGCTAGCGTTCTGGTAGATGTTATTGCAATGTCACATTTAAATGAATCTTTAGTGTTAGTTCTGTGGTACTTGCTTCAGGTCAGAGTAAGTAGAATATTTTCCATTATTCTATACCTGAGCCCAAGTAGGTTTTATCTTCAGTCAAAATTTAGCTCACGGAGAATCGCCCAAGTACATATAAGTAAAACTACCCATCGATTCCACAATGGTTGGGTGGGACTCTAACCATCGCAAACATGTGTATATGTTTTTGTTGTCTACATTGGTGTGATCATCTCTATCATGCATTCCTCCTCATATATGTAGTGCTGGTCTAGTATGAGAAGAAGATGCACTTGTGTGTACATCAATAGTGCATCACAAGCTTTCTTAGCCCTATAAACTGATATTGGGTCGAAATGATCTTCCCCTTTTCCCCTCTGGTTCTTTTCCAAGAAATTTTTCTGTTGGTTGTAAGTTGGGAATGTATAAGGTCCAGATGACTGATAAGGATAACGAGGATTCACCTCGCTCAAATTGATCTGAGATTGAGGTGTAGATAGTTGTTGTACACTTGTACTACTGCCATAAAAGTTCAAGGGCAGATTTACTAGCCTGCAGAGTCTACTAATAGGTCTAAGCTTTACAATCTATTATTAAGCTACTCTACAGATCCGCAAGAGTAGTATCTGGACCTTTTGCTGAATTCAATCATCAAGCATTCTTTATTTTAGTTCAGCTATATGATATTGTTTCACGTTTCATCTTTACTTGTTCATGTATGGTATGTGATCAAATGTTCAATTTGTTTAATTTAGATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAAC</genome_strand>
        <mrna_strand>GATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGCACACAGAATCTCATGAATGGGTTAAAGTTGACGGCAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGCTTTGGTGCTGATGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGCTTCAGGGAAGGTAGAGGAATTCAATGAGGAACTGAACAACGGTCCTGCTCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E476035" ref_strand="+" ref_description="SGN-E476035 [cSTB-43-I15]">
      <seq>ttttcccctagtacatacaatacaagtgttggcacagctctacatccaaaccagatacctaaaagaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgatggtaattctgcaacaattggcatcactgatcatgctcagaaacatttaggtgatgttgtttacgttgaatttcctgaagttgggtcttctgtggaacaatttggcagttttggtgctgttgaaagtgtcaaggcttccagcgatatcaattctcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19399" stop="16390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19099" g_stop="18953" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16690" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="351" r_length="206" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E476035" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19099" e_stop="18953"/>
          <exon e_start="16895" e_stop="16690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCCCTAATACATACAATACAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCT</genome_strand>
        <mrna_strand>TTTTCCCCTAGTACATACAATACAAGTGTTGGCACAGCTCTACATCCAAACCAGATACCTAAAAG--AAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGATGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335670" ref_strand="+" ref_description="SGN-E335670 [cTOE-8-I11]">
      <seq>acagctctacatccaaagcagattcctaaaagaaaaaaaatggctacaaagttgtgggcttcaagggctgcttcatatctcaggatctcagcatttcacagggcttttgccactgtgcccaaggatttgaagtacacagaatctcatgaatgggttaaagttgacggtaattctgcaacaattggcatcactgatcatgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="19366" stop="16509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19066" g_stop="18953" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16895" g_stop="16809" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="202" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E335670" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>201</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19066" e_stop="18953"/>
          <exon e_start="16895" e_stop="16809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGCTCTACATCCAAAGCAGATTCCTAAAAGAA-AAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTGGTAATGGAGTTGTATTATTGTTTCTGGAATTACCCTCTTACCCTTTTGTTCGAATGCTTTGAGTTATGTGGATCTTGGTTATGTCAGTAATTTTTTTGTTCAAGATTTTGCTTGATCTGTTATTTTCTTGATTAAAGATCCGATTTTTGGAAGTGGGGTGTGGAGTTTGTGTGATTTCTTGGATCAGCAGAAGGATTTGTTGGGTTTTTGATAGATTTGTATTTCATGTTTTTGATTTTGTACTCTTGTCACCTTTTTATTTTATTAATATTATGGGATGTATCCAGGATTTTAGCAAGGTGTTTGTTTTGTATGGAGATGATGATTGGGATATATTGCTGTCCCTTGCTTTGTGCATTGTTTTTCTTTTATATAATCAGTGGAAGGGTTATTGTGTTGGAGGTTTCTTCTTTATTCTTGGTTATGCAATATGTCACCTTTGGTAGTCTGAAGTGTTTCAAGGTTGTTGTAGGGTATTTTTTTTTGTGTGTGTGTTTAGAGAAATCTGTAGGGTATTGTGTGTTCTTCAATCTTTTTGCAGATGTTGATTGAGGACTGATTTTTTTTGTTTTTGCTCTGTGAATCTGTCTTCTTAGATGTATATGTATTTTTTATGATGTGGACTTGGGGGGTTAATTTCTTAGGCGGTGCTCAACGAATAGTTATTATCTCCTCCTTGTTTCCAACTTTCTTCAACAAAGAAAGTCAAAGATAGTAACTATTGGTTGAGTGACTCTCCGCTAAATCAAATCGGAGCTTATGCTTATTTCTGATATATCATCAGTCATGTAGGATTGAAGATGATAACGCAATGAGGACTAGAGCTCTTTTTAATTTTAATGACTAAATTTTTGGACGTTTTATAATTTGACTAACTTTGGATAATGGTAGTAAATTGTCACACTGCATCAACAAATTCAGAGTAATTGTTTTCACTTCCATCACTGTATACTGCATCCATGTTTCTACTTGTTTTGTTTGCATTAATGTATTTCGAATAAAAGAAGTTCTAAAGCAGGTATCTATGAAGATAATTTGAATCATGTCCCATCATAATTGTTATTCTGTTCCTTCAAGTGCCGACCTCTCTAGTAGCTGGTTGTGAACTGCAGATTCTCCATGGTTTACAGGAATAGCTGAACAATTTTTTGTGGACTGTAACCATGTGAGATTCTCCAGTCACACGCCTTGTATATTTCTCTGTCCTCTATAGTTACATTGCAAAACTAAGGCATCTTGTAGTATGTGTGAGTTTTGTTCATAATATATGTAGAGAACATGCTAAATACCTATTCAGGTGTGTTAGCTTAGCGGACGATCTGGATAGAGTTGGCAAGCTAATTCTGTTGTTATAAGTTAAGTGTTGAGTTTGATTCATATATATTGATTCGGACATGTTTGATCCTTCCAGATATGAGTTGTGGGGAGCCTAGCTTAAAATCTACAGTATCCTTCAGACCTTGAACCTTAAAAATAAGAAGGCGTCAAGGAAAATGAATTTAATGATAGCCTATTCCGATTGCTACGTGTTGACATTTTCCAATTAAGTTGGACACAAAATGTTGATATAATTTTTTTGTGATAACATGTGCTCGAAATATTTATACAATCTAAATAATTATAAAGGTTTATTTCTTTGTGCAAATTATGTTCATAGATGTTGTCAATATCCTGAATTATGCATATGCAAATTTTAGAGTGCTTTTGCTTCATATGGTGTTGCTATTGATTTGTTTGACTTTCTATGTTTTGTCTGAATCCACTGATTATAAAGAGTAAAGTTTTGACAAAACCATAGAAAGACTTAACTCGAAAGTTCCCCTTGCATAATGTAGCCAACAACCTATGGATGACGGGGATGTTCAGTTACGTATGATTATGAATAACACCCTCTCTCCTTTCTGAGGTAAAAAGAAGTAAACCAACAAACAAAAGTAATTTTGGCCCAAAAGCAATGTATTTATTTTTTAAAAGAAGGAATGTAACTAACAAAATTTGAAGCATTGTCTGAATATGACCTGATGTGACAATGGTTTTGTGTTAAAAAATTTTTGCAGTGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTC</genome_strand>
        <mrna_strand>ACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E541467" ref_strand="+" ref_description="SGN-E541467 [TUS-62-E11](-)">
      <seq>gatgcctatggaagagctggtcttcatgaagatgcacaaactgtgtttgatgagatgacgcggctggggatagctcntacgatgaaatcctacatgttactcatatcagcctactctagaaacagtaacgtgtcaaaatgtgaagaaatcgtgaatcagatgcagaaatcaggagtgaaactagatacctttcttcttaacagcatgctcaacttgtatggtcgtcttggccagtttgctaaaatggaagaactcttgactgtcatagaagctggaccatacgtagccgatatcagcacctacaatatcttgatcaatgcatatggacgttcaggatttatcgtaaaaatggaagaagttttccaatcacttccttctaagaacctgcagccagatgtggttacatggacttcccgtcttggagcatactccaaaaagaaacagtaccaaagatgcttagaaatcttcgaggaaatgatcgatgaaggttgctatccagatggcggaacagccaaagtgctcctttcgtcttgttcaagtgaagatcagattgaacaagttacaacagtcattagatcaatgcacaagaatgtgaagacagtagagttagtttgacatggcttgtacagctttcatgacattcccatatttgatgtgaaagttagaacatggacataccggcaaaatcgaaagtaaaaatttcaacttaaaaaaaaaaaaaaaaaaaactcgagggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="25508" stop="5032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25208" g_stop="25178" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25177" i_stop="24864" i_length="314">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24863" g_stop="24176" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="718" r_length="687" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24175" i_stop="21866" i_length="2310">
            <donor d_prob="0.068" d_score="0.90"/>
            <acceptor a_prob="0.708" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21865" g_stop="21847" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="737" r_length="19" r_score="0.579"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E541467" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25208" e_stop="25178"/>
          <exon e_start="24863" e_stop="24176"/>
          <exon e_start="21865" e_stop="21847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGCCTATGGAAGAGCTGGTCTTCATGAAGGTATTTTTTTTCTCAATGTTAAAAAGGTGTTTCTCTTGCATTTAGTGAACAGAATAGTTTAAGCTCATCTGGACAGCATGATAATTGCAACTTCTGAATGCATATTCATATAACAACCTAAATAAGGGAAGTTTTCAATATGAAACTGATGACAAGTGAAAATGAAAAGTTCAAGAAACAAAGTGCTCTCAACGGTCTCAAGCGATCTATTTCTGTCGACAACAAGTTTAGTGTCCACGGTCTTGTTCAATCCATATGCATTTATGAAAGTTTTCTGACTGTATCTTTTCATTTATCTAAACAATATATACTAGATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTGAAGAAATCGTGAATCAGATGCAGAAATCAGGAGTGAAACTAGATACCTTTCTTCTTAACAGCATGCTCAACTTGTATGGTCGTCTTGGCCAGTTTGCTAAAATGGAAGAACTCTTGACTGTCATAGAAGCTGGACCATACGTAGCCGATATCAGCACCTACAATATCTTGATCAATGCATATGGACGTTCAGGATTTATCGTAAAAATGGAAGAAGTTTTCCAATCACTTCCTTCTAAGAACCTGCAGCCAGATGTGGTTACATGGACTTCCCGTCTTGGAGCATACTCCAAAAAGAAACAGTACCAAAGATGCTTAGAAATCTTCGAGGAAATGATCGATGAAGGTTGCTATCCAGATGGCGGAACAGCCAAAGTGCTCCTTTCGTCTTGTTCAAGTGAAGATCAGATTGAACAAGTTACAACAGTCATTAGATCAATGCACAAGAATGTGAAGACAGTAGAGTTAGTTTGACATGGCTTGTACAGCTTTCATGACATTCCCATATTTGATGTGAAAGTTAGAACATGGACATACCGGCAAAATCGAAAGTAAAAATTTCAACTTAAAATCCAACTGTACTTGGCTTGATTCGTTTTTTACATTTTGCAAGCCATGATGATTGATTTGGTTCAATATTAGGTGAACATTGACCCAAACGGTACTCTTGAACACCATGTTCAATCTTAGGTAAAAATCGAATCAAACAACGCTTTCAAAGTTAGAAAGAGAAGAGTGTCTCCCCTCCCTCCTGTTTTTTTTCCTAAAGGCAGCTCCAGTATTAAGAACGTATGCAACAATCAACAACCAAAAACCCAGTATAGTCCGACAAGCGAGGTCTAAAAAGAATAGAGTATACGCAAACCTAACTCCTACCTAGCGAGGGTAGAGTGTACTCAAACACTCCTGCCAGCAAAGATGTAGAAAGGACAGAGTCTACGCAAACCATACTCCTACCCTCCATGCAAAGAGGTACAGAGGTTGTTTCTGAAAGACTCTCACGTCAAATACGCAATACATAAGTAATATGGCCATGGCAAATAAAAGGGAACCCATAATATAGCATTCAAAAGCACAGTAAATTACAAGTGAGAAAAATCACAAGACAGACAACTACAGGAAAAATGCTACTGAACAGAAAAACAAGTGCAATGCACCAACCTATCACCAAGCTTAAACGCTTGGAAACGAGACAACCCCATGTACTGTTCAACCACATCTCCCAATCATGTAACAATAATCTTCTCGAAATGCATAATTAGTACACGAAACTGTTCATGTGCGCCTACGCCTTACAATCGACTCAATATAAGCAACTATGGGCAGATAAATATAGTACAATACATCAGTGTTAACAAAACACCCTGGGATTATTCATGCTATTGCTGTTTCCTTCTCCCTCCAAGTTGCGAGGACCTCATCAGTTCTAAACCGTTGAGTAAACGTTGATTCCTCCATTGGAGTTGATGCACCATTCGCATACTCTAGGAGACCGGTATAAGCAATCATTGCTCCATTGTCAACGCAGTATCTATCGTCAGTTGCAAACAACTTTCCGCCCCTCTCAGAGCACATAATTTGCATCATCTTTTGCAAGCGCTCATTACATCCTACACCACCAACAATCAACACGTCTTTCTTATCGCAATGCGCCATGGCTCGTTCTGTAATCTCTACAAGCATTGCAAACAGAGTTTCCTGTAAAGAGAAACAAAGGTCAGCCGGACTGCACTCGTTATTTTTCAGCTTCTCCTCAGCTGTGGCTTCAATGAAGCTCAGTATTCCACTGAAGGAAATGTCCATTCCCTTCACAACATATGGAAGTTCAATGAACTTCTCACCTTTTTTCGCAAGCTGTTCAATGTTGTACCCAGGGCTAGGATCATTAGACAATGTAAGAACCCTAGCAAACCTATCCAAACAATTACCCACTGCAATATCAATCGTCTCCCCAAAAATCCTATACCGTCCTTCACTATACGCAATAACCTGAGTATTTCCACCACTCACGTATAGCACAACCGGATCAACCGCCCCGGTTACGATTCGACCCATTTCAATGTGCGCAACACAGTGGTTCACCCCAACAATAGGTTTCTTCCATAGCTGAGATAGAACACGTACAACCACTGCCGAAACCTGCAGTGGAGCACCCATCCCAGGGCCTTTTGTGTAGCAGATACAGTCAATTTCATCGGGAGTTACTCCGGCGGTTTCTAGAGCGGATTTTACTAACGGTAAGATGTGTTGGTGGTGATGCTGGGCGGTTTCACGGGGGAGAAAACCTTGGCCTGGTGGCGTTATGTAGGTGTGTCGTGGATTAGAAAGAATTGTGCCGTCGATTGCTACTACGCCGACGCCAATTTTGTTGGCGGAACCCTCGAACCCTAGGGCTATCAATTTCTTATCCTTCATTGCCGCCGCCGTCGGAGGATTAGGGTTTAGCAGTCAAATGAGCAGTGACGATAAGGGTTTGGTCTCTCTTCTCCCAGAAAATTGGACTTGTTTAGGGGACGAGGCCTAATACTTTTCCTATATTACACTTAAACACCTCTATACTATAGCTTAATTACAAATCCACATTTTATATTTTATAATCAACAAAACAACATATGTGGTGAATTTCGACTAGTGGAGTCTCTGATAGGGGTTGGCATTCGATATTCGGTTTCAAATTTTGAGTTTGTTAATATCATTGGTAGTTGAAAGTAGATATCAAAATTTCAAATTTTTAAAATTCAATTTGGTAATTTGATAATCGGCAAATTAAGTTTTAATTTTGTGCGATACTCGGTTATACTGTATTGAAGTTGTAGCTGATTGTATTATGAAGTTAATACTATTTTTTCAATTAATTTTCTTTTTAATTTGGAGACATGATATAATAGAAAATCAACAAGCAAGAAG</genome_strand>
        <mrna_strand>GATGCCTATGGAAGAGCTGGTCTTCATGAAG..........................................................................................................................................................................................................................................................................................................................ATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCNTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTGAAGAAATCGTGAATCAGATGCAGAAATCAGGAGTGAAACTAGATACCTTTCTTCTTAACAGCATGCTCAACTTGTATGGTCGTCTTGGCCAGTTTGCTAAAATGGAAGAACTCTTGACTGTCATAGAAGCTGGACCATACGTAGCCGATATCAGCACCTACAATATCTTGATCAATGCATATGGACGTTCAGGATTTATCGTAAAAATGGAAGAAGTTTTCCAATCACTTCCTTCTAAGAACCTGCAGCCAGATGTGGTTACATGGACTTCCCGTCTTGGAGCATACTCCAAAAAGAAACAGTACCAAAGATGCTTAGAAATCTTCGAGGAAATGATCGATGAAGGTTGCTATCCAGATGGCGGAACAGCCAAAGTGCTCCTTTCGTCTTGTTCAAGTGAAGATCAGATTGAACAAGTTACAACAGTCATTAGATCAATGCACAAGAATGTGAAGACAGTAGAGTTAGTTTGACATGGCTTGTACAGCTTTCATGACATTCCCATATTTGATGTGAAAGTTAGAACATGGACATACCGGCAAAATCGAAAGTAAAAATTTCAACTTAAAA-AAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAACTCGAGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705011" ref_strand="+" ref_description="SGN-E705011 [FA25DF09]">
      <seq>ggcacgaggattttctgggagaagagagaccaaacccttatcgtcactgctcatttgactgctaaaccctaatcctccgacggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggcgtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccaccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctgggatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgttggggtgaaccactgtgttgcgcacattgaaatgggtcgaatcgtaaccggggcggttgatccggttgtgctatacgtgagtggtggaaatactcaggttattgcgtatagtgaaggacggtataggatttttggggagacgattgatattgcagtgggtaattgtttggataggtttgctagggttcttacattgtctaatgatcctagccctgggtacaacattgaacagcttgcgaaaaaaggtgagaagttcattgaacttccatatgttgtgaagggaatggacatttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21957" stop="23263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22247" g_stop="22963" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E705011" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705011" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22247" e_stop="22963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGTCCAATTTTCTGGGAGAAGAGAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAATGGACATTTCCT</genome_strand>
        <mrna_strand>GGCACG-AGGATTTTCTGGGAGAAGAGAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAATGGACATTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697899" ref_strand="+" ref_description="SGN-E697899 [FA04CE09]">
      <seq>gggagaagagagaccaaacccttatcgtcactgctcatttgactgctaaaccctaatcctccgacggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggcgtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccaccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctgggatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgttggggtgaaccactgtgttgcgcacattgaaatgggtcgaatcgtaaccggggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21964" stop="23021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22264" g_stop="22721" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E697899" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22264" e_stop="22721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGAAGAGAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGC</genome_strand>
        <mrna_strand>GGGAGAAGAGAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339378" ref_strand="+" ref_description="SGN-E339378 [cTOF-4-I21]">
      <seq>gagaccaaacccttatcgtcactgctcatttgactgctaaaccctaatcctccgacggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggcgtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccaccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctgggatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgttggggtgaaccactgtgttgcgcacattgaaatgggtcgaatcgtaaccggggcggttgatccggttgtgctatacgtgagtggtggaaatactcaggttattgcgtatagtgaaggacggtataggatttttggggagacgattgatattgcagtgggtaattgtttggataggtttgctagggttcttacattgtctaatgatcctagccctgggtacaacattgaacagcttgcgaaaaaaggtgagaagttcattgaacttccatatgttgtgaagggaatggacatttncttcagtggaatactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21973" stop="23278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22273" g_stop="22978" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E339378" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22273" e_stop="22978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAATGGACATTTCCTTCAGTGGAATACTGA</genome_strand>
        <mrna_strand>GAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAATGGACATTTNCTTCAGTGGAATACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339251" ref_strand="+" ref_description="SGN-E339251 [cTOF-4-I20]">
      <seq>gagaccaaaccctaatcgtcactgctcatttgactgctaaaccctaatcctccgacggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgttggcgtatcagcaatcgacagcacaattctttctaattcacgacacacctacataacgccaccaggccaaagttttctcccccttgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctgggatgggtgctccactgcacgtttcggcagtggatgtacgtgttctatctcagctatggaagaaacctattgttggggtgaaccactgtgttgcgcacattgaaatgggtcgaatcgtaaccggagcggttgatccggttgtgctatacgtgagtggtggaaatactcaggttattgcgtatagcgaaggacggtataggatttttggggagacgatcgatatagcagcgggcaattgtttggataggtttgctagggttcttacattgtctaatgatcctagccctgggtacaacattgaacagcttgccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21973" stop="23208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22273" g_stop="22908" g_length="636"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="636" r_length="636" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E339251" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339251" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22273" e_stop="22908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAA</genome_strand>
        <mrna_strand>GAGACCAAACCCTAATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTTGGCGTATCAGCAATCGACAGCACAATTCTTTCTAATTCACGACACACCTACATAACGCCACCAGGCCAAAGTTTTCTCCCCCTTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCACGTTTCGGCAGTGGATGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGAGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGCGAAGGACGGTATAGGATTTTTGGGGAGACGATCGATATAGCAGCGGGCAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E341443" ref_strand="+" ref_description="SGN-E341443 [cTOE-23-G9]">
      <seq>agaccaaacccttatcgtcactgctcatttgactgctaaaccctaatcctccgacggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggcgtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccaccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctgggatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgttggggtgaaccactgtgttgcgcacattgaaatgggtcgaatcgtaaccggggcggttgatccggttgtgctatacgtgagtggtggaaatactcaagttattgcgtatagtgaaggacggtataggatttttggggagacgattgatattgcagtgggtaattgtttggataggcttgctagggttcttacattgtctaatgatcctagccctgggtacaacattgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21974" stop="23198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22274" g_stop="22898" g_length="625"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E341443" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22274" e_stop="22898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACA</genome_strand>
        <mrna_strand>AGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAAGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGCTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573053" ref_strand="+" ref_description="SGN-E573053 [32302]">
      <seq>cgtcactgctcatttgactgctaaaccctaaccctccgacggcggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggagtagtagcattcgacggcacaattctttctaatccacgacacacctacataacgccgccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctggaatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctatagttggggttaaccactgtgttgcgcacattgaaatgggtcggatcgtaaccggggcggttgacccggttgtgctgtacgtgagtggtggaaatactcaggttattgcgtacagtgaaggacggtataggatttttggggagacgattgatattgctggtggggaattgcttggataggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21989" stop="23143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22289" g_stop="22843" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E573053" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22289" e_stop="22843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGA---CGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGC-AGTGGGTAATTGTTTGGATAGGT</genome_strand>
        <mrna_strand>CGTCACTGCTCATTTGACTGCTAAACCCTAACCCTCCGACGGCGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGAGTAGTAGCATTCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCGCCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGAATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATAGTTGGGGTTAACCACTGTGTTGCGCACATTGAAATGGGTCGGATCGTAACCGGGGCGGTTGACCCGGTTGTGCTGTACGTGAGTGGTGGAAATACTCAGGTTATTGCGTACAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCTGGTGGGGAATTGCTTGGATAGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334660" ref_strand="+" ref_description="SGN-E334660 [cTOD-23-H3]">
      <seq>cgtcactgctcatttgactgctaaaccctaatcctccgacggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggcgtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccaccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctgggatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgttggggtgaaccactgtgttgcgcacattgaaatgggtcgaatcgtaaccggggcggttgatccggttgtgctatacgtgagtggtggaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21989" stop="23060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22289" g_stop="22760" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E334660" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22289" e_stop="22760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATAC</genome_strand>
        <mrna_strand>CGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E721053" ref_strand="+" ref_description="SGN-E721053 [FC12CE10]">
      <seq>catttgactgctaaaccctaatcctccgacggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggcgtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccaccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctgggatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgttggggtgaaccactgtgttgcgcacattgaaatgggtcgaatcgtaaccggggcggttgatccggttgtgctatacgtgagtggtggaaatactcaggttattgcgtatagtgaaggacggtataggatttttggggagacgattgatattgcagtgggtaattgtttggataggtttgctagggttcttacattgtctaatgatcctagccctgggtacaacattgaacagcttgcgaaaaaaggtgagaagttcattgaacttccatatgttgtgaagggaatggacatttcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21999" stop="23264"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22299" g_stop="22964" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E721053" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E721053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22299" e_stop="22964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAATGGACATTTCCTT</genome_strand>
        <mrna_strand>CATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAATGGACATTTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E459856" ref_strand="+" ref_description="SGN-E459856 [cPRO-29-M13]">
      <seq>gtcactgctcatttgactgctaaaccctaaccctccgacggcggcggcggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggagtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccgccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctggaatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgtgggggttaaccactgtgttgcgcacattgaaatgggtcggatcgtaaccggggcggttgacccggttgtgctgtacgtgagtggtggaaatactcaggttattgcgtacagtgaaggacggtataggatttttggggagacgattgatattgctgtgggggattgcttggataggtttgctagggttcttacattgtctaatgatcctagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="21990" stop="23179"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22329" g_stop="22879" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="599" r_length="551" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E459856" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.920" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22329" e_stop="22879"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCC</genome_strand>
        <mrna_strand>GGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGAGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCGCCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGAATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTGGGGGTTAACCACTGTGTTGCGCACATTGAAATGGGTCGGATCGTAACCGGGGCGGTTGACCCGGTTGTGCTGTACGTGAGTGGTGGAAATACTCAGGTTATTGCGTACAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCTGTGGGGGATTGCTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472782" ref_strand="+" ref_description="SGN-E472782 [cSTB-29-L18]">
      <seq>atttgactgctaaaccctaaccctccgacggcggcggcggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggagtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccgccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctggaatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgtgggggttaaccactgtgttgcgcacattgaaatgggtcggatcgtaaccggggcggttgacccggttgtgctgtacgtgagtggtggaaatactcaggttattgcgtacagtgaaggacggtataggatttttggggagacgattgatattgctgtggggaattgcttggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="22000" stop="23139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22329" g_stop="22839" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="549" r_length="511" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E472782" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E472782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22329" e_stop="22839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGAT</genome_strand>
        <mrna_strand>GGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGAGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCGCCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGAATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTGGGGGTTAACCACTGTGTTGCGCACATTGAAATGGGTCGGATCGTAACCGGGGCGGTTGACCCGGTTGTGCTGTACGTGAGTGGTGGAAATACTCAGGTTATTGCGTACAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCTGTGGGGAATTGCTTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413692" ref_strand="+" ref_description="SGN-E413692 [STM-18-E2]">
      <seq>atttgactgctaaaccctaaccctccgacggcggcggcggcggcggcaatgaaggataagaaattgatagccctagggttcgagggttccgccaacaaaattggcgtcggagtagtagcaatcgacggcacaattctttctaatccacgacacacctacataacgccgccaggccaaggttttctcccccgtgaaaccgcccagcatcaccaccaacacatcttaccgttagtaaaatccgctctagaaaccgccggagtaactcccgatgaaattgactgtatctgctacacaaaaggccctggaatgggtgctccactgcaggtttcggcagtggttgtacgtgttctatctcagctatggaagaaacctattgtgggggttaaccactgtgttgcgcacattgaaatgggtcggatcgtaaccggagcggttgacccggttgtgctgtacatgagtggtggaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="22000" stop="23060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22329" g_stop="22760" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="470" r_length="432" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E413692" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413692" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22329" e_stop="22760"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATAC</genome_strand>
        <mrna_strand>GGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGAGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCGCCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGAATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTGGGGGTTAACCACTGTGTTGCGCACATTGAAATGGGTCGGATCGTAACCGGAGCGGTTGACCCGGTTGTGCTGTACATGAGTGGTGGAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E456258" ref_strand="+" ref_description="SGN-E456258 [cSTS-29-A19]">
      <seq>gttcgagggttccgccaacaaaattggcgtcggagtagtagccaatcgacggcaccaattctttctaatccaccgaccaccccctaacattaaccgcccgccaggccaaggttttctcccccgtgaaaaccgcccagcatcaccaccaacacattcttaccgttagtaaaatccgctctagaaaaccgccggagtaacctcccgatgaaattgacctgtatctgctacacaaaagggccctggaatgggtgctccactgcaggtttcggcagtggttgtaccgtgttctatctcagctatggaagaaacctattgtgggggttaaccactgtgttgcgcacattgaaatgggtcggatcgtaaccggggcggttgacccggttgtgctgtacgtgagtggtggaaatactcaggttattgcgtacagtgaaggacggtataggatttttggggagacgattgatattgctgtggggaattgcttggataggtttgctagggttcttacattgtctaatgatcctagccctgngtacaacattgaacagcttgcgaaaaaggcgaaaagttcattgaacttccatatgttgtaaagggaatgggatgtttccttcagtggaatactgagcttcattgaagccacagctgaggagaagctgaaaaataccgagtgtagtccggctgacctttgtttctctttgcaggaaactctctttgcgatgcttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="22068" stop="23378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22368" g_stop="23078" g_length="711"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E456258" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E456258" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22368" e_stop="23078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAG-CAATCGACGGCA-CAATTCTTTCTAATCCA-CGA-CA-CACCT-ACA-TAA-CG-CCACCAGGCCAAGGTTTTCTCCCCCGTG-AAACCGCCCAGCATCACCACCAACACA-TCTTACCGTTAGTAAAATCCGCTCTAG-AAACCGCCGGAGTAA-CTCCCGATGAAATTGA-CTGTATCTGCTACACAAAA-GGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTA-CGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAAT-GGACATTTCCTTCAGTGGAATACTGAGCTTCATTGAAGCCACAGCTGAGGAGAAGCTGAAAAATAACGAGTGCAGTCCGGCTGACCTTTGTTTCTCTTTACAGGAAACTCTGTTTGCAATGCTTGT</genome_strand>
        <mrna_strand>GTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGAGTAGTAGCCAATCGACGGCACCAATTCTTTCTAATCCACCGACCACCCCCTAACATTAACCGCCCGCCAGGCCAAGGTTTTCTCCCCCGTGAAAACCGCCCAGCATCACCACCAACACATTCTTACCGTTAGTAAAATCCGCTCTAGAAAACCGCCGGAGTAACCTCCCGATGAAATTGACCTGTATCTGCTACACAAAAGGGCCCTGGAATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACCGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTGGGGGTTAACCACTGTGTTGCGCACATTGAAATGGGTCGGATCGTAACCGGGGCGGTTGACCCGGTTGTGCTGTACGTGAGTGGTGGAAATACTCAGGTTATTGCGTACAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCTGTGGGGAATTGCTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGNGTACAACATTGAACAGCTTGCG-AAAAAGGCGAAAAGTTCATTGAACTTCCATATGTTGTAAAGGGAATGGGATGTTTCCTTCAGTGGAATACTGAGCTTCATTGAAGCCACAGCTGAGGAGAAGCTGAAAAATACCGAGTGTAGTCCGGCTGACCTTTGTTTCTCTTTGCAGGAAACTCTCTTTGCGATGCTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344674" ref_strand="+" ref_description="SGN-E344674 [cTOF-14-F8]">
      <seq>agatgatgcaaattatgtgctctgagaggggcggaaagttgtttgcaactgacgatagatactgcgttgacaatggagcaatgattgcttataccggtctcctagagtatgcgaatggtgcatcaactccaatggaggaatcaacgtttactcaacggtttagaactgatgaggtcctcgcaacttggagggagaaggaaacagcaatagcatgaataatcccagggtgttttgttaacactgatgtattgtactatatttatctgcccatagttgcttatattgagtcgattgtaaggcgtaggcgcacatgaacagtttcgtgtactaattatgcatttcgagaagattattgttacatgattgggagatgtggttgaacagtacatggggttgtctcgtttccaagcgtttaagcttggtgataggttggtgcattgcacttgtttttctgttcagtagcatttttcctgtagttgtctgtcttgtgatttttctcacttgtaatttactgtgcttttgaatgctatattatgggttcccttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="22865" stop="24012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23165" g_stop="23711" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="548" polyA_stop="557"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E344674" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23165" e_stop="23711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGATGCAAATTATGTGCTCTGAGAGGGGCGGAAAGTTGTTTGCAACTGACGATAGATACTGCGTTGACAATGGAGCAATGATTGCTTATACCGGTCTCCTAGAGTATGCGAATGGTGCATCAACTCCAATGGAGGAATCAACGTTTACTCAACGGTTTAGAACTGATGAGGTCCTCGCAACTTGGAGGGAGAAGGAAACAGCAATAGCATGAATAATCCCAGGGTGTTTTGTTAACACTGATGTATTGTACTATATTTATCTGCCCATAGTTGCTTATATTGAGTCGATTGTAAGGCGTAGGCGCACATGAACAGTTTCGTGTACTAATTATGCATTTCGAGAAGATTATTGTTACATGATTGGGAGATGTGGTTGAACAGTACATGGGGTTGTCTCGTTTCCAAGCGTTTAAGCTTGGTGATAGGTTGGTGCATTGCACTTGTTTTTCTGTTCAGTAGCATTTTTCCTGTAGTTGTCTGTCTTGTGATTTTTCTCACTTGTAATTTACTGTGCTTTTGAATGCTATATTATGGGTTCCCTTTT</genome_strand>
        <mrna_strand>AGATGATGCAAATTATGTGCTCTGAGAGGGGCGGAAAGTTGTTTGCAACTGACGATAGATACTGCGTTGACAATGGAGCAATGATTGCTTATACCGGTCTCCTAGAGTATGCGAATGGTGCATCAACTCCAATGGAGGAATCAACGTTTACTCAACGGTTTAGAACTGATGAGGTCCTCGCAACTTGGAGGGAGAAGGAAACAGCAATAGCATGAATAATCCCAGGGTGTTTTGTTAACACTGATGTATTGTACTATATTTATCTGCCCATAGTTGCTTATATTGAGTCGATTGTAAGGCGTAGGCGCACATGAACAGTTTCGTGTACTAATTATGCATTTCGAGAAGATTATTGTTACATGATTGGGAGATGTGGTTGAACAGTACATGGGGTTGTCTCGTTTCCAAGCGTTTAAGCTTGGTGATAGGTTGGTGCATTGCACTTGTTTTTCTGTTCAGTAGCATTTTTCCTGTAGTTGTCTGTCTTGTGATTTTTCTCACTTGTAATTTACTGTGCTTTTGAATGCTATATTATGGGTTCCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413693" ref_strand="+" ref_description="SGN-E413693 [STM-18-E2]">
      <seq>ataaacttaattggggaatagggaacccatatttatccattcaaaaagcacagtacattacaaatgagaaaaatcacaagacagacaactacaggaaaaatgctactgaacagggaaacaagtgcaatgcaccaacctatcaccaagcctatacgcttggaaatgagacaacccccttgtactgttcaaccacatctcccaatcatgttacaataatcttctcgaaatgcataattagtacacgaaattgttcatgtaccgccttactatcgactaattataagcaactatgggcagataaatatagtacaacacattcgtgtgacaaaacacccagggttattcatgctatagctgattccttctccctccaagttgcgaggacctcatcagttctaaaccgttgagtgaatgttgattcctccattggagttgatgcaccattcgcatactctaggagaccggtataagcaatcattgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="23990" stop="22940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23706" g_stop="23240" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="483" r_length="462" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E413693" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23706" e_stop="23240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACCCATAATATAGCATTC-AAAAGCACAGTAAATTACAAGTGAGAAAAATCACAAGACAGACAACTACAGGAAAAATGCTACTGAACAGAAAAACAAGTGCAATGCACCAACCTATCACCAAGCTTAAACGCTTGGAAACGAGACAA-CCCCATGTACTGTTCAACCACATCTCCCAATCATGTAACAATAATCTTCTCGAAATGCATAATTAGTACACGAAACTGTTCATGTGCGCCTACGCCTTACAATCGACTCAATATAAGCAACTATGGGCAGATAAATATAGTACAATACATCAGTGTTAACAAAACACCCTGGGATTATTCATGCTATTGCTGTTTCCTTCTCCCTCCAAGTTGCGAGGACCTCATCAGTTCTAAACCGTTGAGTAAACGTTGATTCCTCCATTGGAGTTGATGCACCATTCGCATACTCTAGGAGACCGGTATAAGCAATCATTGCTC</genome_strand>
        <mrna_strand>GGAACCCATATTTATCCATTCAAAAAGCACAGTACATTACAAATGAGAAAAATCACAAGACAGACAACTACAGGAAAAATGCTACTGAACAGGGAAACAAGTGCAATGCACCAACCTATCACCAAGCCTATACGCTTGGAAATGAGACAACCCCCTTGTACTGTTCAACCACATCTCCCAATCATGTTACAATAATCTTCTCGAAATGCATAATTAGTACACGAAATTGTTCATGT---AC--CGCCTTACTATCGACTAATTATAAGCAACTATGGGCAGATAAATATAGTACAACACATTCGTG-TGACAAAACACCCAGGG-TTATTCATGCTATAGCTGATTCCTTCTCCCTCCAAGTTGCGAGGACCTCATCAGTTCTAAACCGTTGAGTGAATGTTGATTCCTCCATTGGAGTTGATGCACCATTCGCATACTCTAGGAGACCGGTATAAGCAATCATTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E541303" ref_strand="+" ref_description="SGN-E541303 [TUS-62-A10]">
      <seq>gagaactagtctcgagttttttttttttttttttaagttgaaatttttactttcgattttgccggtatgtccatgttctaactttcacatcaaatatgggaatgtcatgaaagctgtacaagccatgtcaaactaactctactgtcttcacattcttgtgcattgatctaatgactgttgtaacttgttcaatctgatcttcacttgaacaagacgaaaggagcactttggctgttccgccatctggatagcaaccttcatcgatcatttcctcgaagatttctaagcatctttggtactgtttctttttggagtatgctccaagacgggaagtccatgtaaccacatctggctgcaggttcttagaaggaagtgattggaaaacttcttccatttttacgataaatcctgaacgtccatatgcattgatcaagatattgtaggtgctgatatcggctacgtatggtccagcttctatgacagtcaagagttcttccattttagcaaactggccaagacgaccatacaagttgagcatgctgttaagaagaaaggtatctagtttcactcctgatttctgcatctgattcacgatttcttcacattttgacacgttactgtttctagagtaggctgatatgagtaacatgtaggatttcatcgtaggagctatccccagccgcgtcatctcatcaaacacagtttgtgcatcttcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="5032" stop="25165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24152" g_stop="24866" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="714" r_length="714" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E541303" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24152" e_stop="24866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAAACGAATCAAGCCAAGTACAGTTGGATTTTAAGTTGAAATTTTTACTTTCGATTTTGCCGGTATGTCCATGTTCTAACTTTCACATCAAATATGGGAATGTCATGAAAGCTGTACAAGCCATGTCAAACTAACTCTACTGTCTTCACATTCTTGTGCATTGATCTAATGACTGTTGTAACTTGTTCAATCTGATCTTCACTTGAACAAGACGAAAGGAGCACTTTGGCTGTTCCGCCATCTGGATAGCAACCTTCATCGATCATTTCCTCGAAGATTTCTAAGCATCTTTGGTACTGTTTCTTTTTGGAGTATGCTCCAAGACGGGAAGTCCATGTAACCACATCTGGCTGCAGGTTCTTAGAAGGAAGTGATTGGAAAACTTCTTCCATTTTTACGATAAATCCTGAACGTCCATATGCATTGATCAAGATATTGTAGGTGCTGATATCGGCTACGTATGGTCCAGCTTCTATGACAGTCAAGAGTTCTTCCATTTTAGCAAACTGGCCAAGACGACCATACAAGTTGAGCATGCTGTTAAGAAGAAAGGTATCTAGTTTCACTCCTGATTTCTGCATCTGATTCACGATTTCTTCACATTTTGACACGTTACTGTTTCTAGAGTAGGCTGATATGAGTAACATGTAGGATTTCATCGTAGGAGCTATCCCCAGCCGCGTCATCTCATCAAACACAGTTTGTGCATCTA</genome_strand>
        <mrna_strand>GAGAACTAGTCTCGAG-TTTTTTTTTTTTTTTTTTAAGTTGAAATTTTTACTTTCGATTTTGCCGGTATGTCCATGTTCTAACTTTCACATCAAATATGGGAATGTCATGAAAGCTGTACAAGCCATGTCAAACTAACTCTACTGTCTTCACATTCTTGTGCATTGATCTAATGACTGTTGTAACTTGTTCAATCTGATCTTCACTTGAACAAGACGAAAGGAGCACTTTGGCTGTTCCGCCATCTGGATAGCAACCTTCATCGATCATTTCCTCGAAGATTTCTAAGCATCTTTGGTACTGTTTCTTTTTGGAGTATGCTCCAAGACGGGAAGTCCATGTAACCACATCTGGCTGCAGGTTCTTAGAAGGAAGTGATTGGAAAACTTCTTCCATTTTTACGATAAATCCTGAACGTCCATATGCATTGATCAAGATATTGTAGGTGCTGATATCGGCTACGTATGGTCCAGCTTCTATGACAGTCAAGAGTTCTTCCATTTTAGCAAACTGGCCAAGACGACCATACAAGTTGAGCATGCTGTTAAGAAGAAAGGTATCTAGTTTCACTCCTGATTTCTGCATCTGATTCACGATTTCTTCACATTTTGACACGTTACTGTTTCTAGAGTAGGCTGATATGAGTAACATGTAGGATTTCATCGTAGGAGCTATCCCCAGCCGCGTCATCTCATCAAACACAGTTTGTGCATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E295629" ref_strand="+" ref_description="SGN-E295629 [cLET-25-M23]">
      <seq>agaactagtctcgagttttttttttttttttttaagttgaaatttttactttcgattttgccggtatgtccatgttctaactttcacatcaaatatgggaatgtcatgaaagctgtacaagccatgtcaaactaactctactgtcttcacattcttgtgcattgatctaatgactgttgtaacttgttcaatctgatcttcacttgaacaagacgaaaggagcactttggctgttccgccatctggatagcaaccttcatcgatcatttcctcgaagatttctaagcatctttggtactgtttctttttggagtatgctccaagacgggaagtccatgtaaccacatctggctgcaggttcttagaaggaagtgattggaaaacttcttccatttttacgataaatcctgaacgtccatatgcattgatcaagatattgtaggtgctgatatcggctacgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="5032" stop="24917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24153" g_stop="24617" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E295629" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24153" e_stop="24617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAACGAATCAAGCCAAGTACAGTTGGATTTTAAGTTGAAATTTTTACTTTCGATTTTGCCGGTATGTCCATGTTCTAACTTTCACATCAAATATGGGAATGTCATGAAAGCTGTACAAGCCATGTCAAACTAACTCTACTGTCTTCACATTCTTGTGCATTGATCTAATGACTGTTGTAACTTGTTCAATCTGATCTTCACTTGAACAAGACGAAAGGAGCACTTTGGCTGTTCCGCCATCTGGATAGCAACCTTCATCGATCATTTCCTCGAAGATTTCTAAGCATCTTTGGTACTGTTTCTTTTTGGAGTATGCTCCAAGACGGGAAGTCCATGTAACCACATCTGGCTGCAGGTTCTTAGAAGGAAGTGATTGGAAAACTTCTTCCATTTTTACGATAAATCCTGAACGTCCATATGCATTGATCAAGATATTGTAGGTGCTGATATCGGCTACGTATG</genome_strand>
        <mrna_strand>AGAACTAGTCTCGAG-TTTTTTTTTTTTTTTTTTAAGTTGAAATTTTTACTTTCGATTTTGCCGGTATGTCCATGTTCTAACTTTCACATCAAATATGGGAATGTCATGAAAGCTGTACAAGCCATGTCAAACTAACTCTACTGTCTTCACATTCTTGTGCATTGATCTAATGACTGTTGTAACTTGTTCAATCTGATCTTCACTTGAACAAGACGAAAGGAGCACTTTGGCTGTTCCGCCATCTGGATAGCAACCTTCATCGATCATTTCCTCGAAGATTTCTAAGCATCTTTGGTACTGTTTCTTTTTGGAGTATGCTCCAAGACGGGAAGTCCATGTAACCACATCTGGCTGCAGGTTCTTAGAAGGAAGTGATTGGAAAACTTCTTCCATTTTTACGATAAATCCTGAACGTCCATATGCATTGATCAAGATATTGTAGGTGCTGATATCGGCTACGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548149" ref_strand="+" ref_description="SGN-E548149 [TUS-58-I16](-)">
      <seq>catgcagcatatgggctgtgaaccagacacagcttcatacaatatcatggtggatgcctatggaagagctggtcttcatgaagatgcacaaactgtgtttgatgagatgacgcggctggggatagctcctacgatgaaatcctacatgttactcatatcagcctactctagaaacagtaacgtgtcaaaatgtgaagaaatcgtgaatcagatgcagaaatcaggagtgaaactagatacctttcttcttaacagcatgctcaacttgtatggtcgtcttggccagtttgctaaaatggaagaactcttgactgtcatagaagctggaccatacgtagccgatatcagcacctacaatatcttgatcaatgcatatggacgttcaggatttatcgtaaaaatggaagaagttttccaatcacttccttctaagaacctgcagccagatgtggttacatggacttcccgtcttggagcatactccaaaaagaaacagtaccaaagatgcttagaaatcttcgaggaaatgatcgatgaaggttgctatccagatggcggaacagccaaagtgctcctttcgtcttgttcaagtgaagatcagattgaacaagttacaacagtcattagatcaatgcacaagaatgtgaagacagtagagttagtttgacatggcttgtacagctttcatgacattcccatatttgatgtgaaagttagaacatggacataccggcaaaatcgaaagtaaaaatttcaacttaaaatccaactgtacttggctgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="25560" stop="23863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25260" g_stop="25178" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25177" i_stop="24864" i_length="314">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24863" g_stop="24176" g_length="688"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="771" r_length="688" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="783" polyA_stop="793"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E548149" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25260" e_stop="25178"/>
          <exon e_start="24863" e_stop="24176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGCAGCATATGGGCTGTGAACCAGACACAGCTTCATACAATATCATGGTGGATGCCTATGGAAGAGCTGGTCTTCATGAAGGTATTTTTTTTCTCAATGTTAAAAAGGTGTTTCTCTTGCATTTAGTGAACAGAATAGTTTAAGCTCATCTGGACAGCATGATAATTGCAACTTCTGAATGCATATTCATATAACAACCTAAATAAGGGAAGTTTTCAATATGAAACTGATGACAAGTGAAAATGAAAAGTTCAAGAAACAAAGTGCTCTCAACGGTCTCAAGCGATCTATTTCTGTCGACAACAAGTTTAGTGTCCACGGTCTTGTTCAATCCATATGCATTTATGAAAGTTTTCTGACTGTATCTTTTCATTTATCTAAACAATATATACTAGATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTGAAGAAATCGTGAATCAGATGCAGAAATCAGGAGTGAAACTAGATACCTTTCTTCTTAACAGCATGCTCAACTTGTATGGTCGTCTTGGCCAGTTTGCTAAAATGGAAGAACTCTTGACTGTCATAGAAGCTGGACCATACGTAGCCGATATCAGCACCTACAATATCTTGATCAATGCATATGGACGTTCAGGATTTATCGTAAAAATGGAAGAAGTTTTCCAATCACTTCCTTCTAAGAACCTGCAGCCAGATGTGGTTACATGGACTTCCCGTCTTGGAGCATACTCCAAAAAGAAACAGTACCAAAGATGCTTAGAAATCTTCGAGGAAATGATCGATGAAGGTTGCTATCCAGATGGCGGAACAGCCAAAGTGCTCCTTTCGTCTTGTTCAAGTGAAGATCAGATTGAACAAGTTACAACAGTCATTAGATCAATGCACAAGAATGTGAAGACAGTAGAGTTAGTTTGACATGGCTTGTACAGCTTTCATGACATTCCCATATTTGATGTGAAAGTTAGAACATGGACATACCGGCAAAATCGAAAGTAAAAATTTCAACTTAAAATCCAACT</genome_strand>
        <mrna_strand>CATGCAGCATATGGGCTGTGAACCAGACACAGCTTCATACAATATCATGGTGGATGCCTATGGAAGAGCTGGTCTTCATGAAG..........................................................................................................................................................................................................................................................................................................................ATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTGAAGAAATCGTGAATCAGATGCAGAAATCAGGAGTGAAACTAGATACCTTTCTTCTTAACAGCATGCTCAACTTGTATGGTCGTCTTGGCCAGTTTGCTAAAATGGAAGAACTCTTGACTGTCATAGAAGCTGGACCATACGTAGCCGATATCAGCACCTACAATATCTTGATCAATGCATATGGACGTTCAGGATTTATCGTAAAAATGGAAGAAGTTTTCCAATCACTTCCTTCTAAGAACCTGCAGCCAGATGTGGTTACATGGACTTCCCGTCTTGGAGCATACTCCAAAAAGAAACAGTACCAAAGATGCTTAGAAATCTTCGAGGAAATGATCGATGAAGGTTGCTATCCAGATGGCGGAACAGCCAAAGTGCTCCTTTCGTCTTGTTCAAGTGAAGATCAGATTGAACAAGTTACAACAGTCATTAGATCAATGCACAAGAATGTGAAGACAGTAGAGTTAGTTTGACATGGCTTGTACAGCTTTCATGACATTCCCATATTTGATGTGAAAGTTAGAACATGGACATACCGGCAAAATCGAAAGTAAAAATTTCAACTTAAAATCCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E541470" ref_strand="+" ref_description="SGN-E541470 [TUS-62-E11]">
      <seq>gaaaaggctgaagctgtcttctctgagatgcggaagaatggccttccttcaagtgctcttgtatataatgcttatattgatgggttaatgaagggaagaaattcgcaaaaagcattggcaatctttgataggatgaagcgtgaaagctgccaaccatctactgatacttatacaatgctgatcaacttatatgggaaggaaaataagtcctacatggcgctaaagatgttcaatgagatgaaagctcagaaatgtaaacctaatatctgtacctacacagctcttgtaaatgcatttgcgagaagtggcctatgtgaaaaggctgaagaagtctttgaagagctacaagaagctgggtttgagcctgatgtttacacctataatgccttgatggaagcttacagtcgtgcaggctaccctcagggtgctgcagagatcttttctctcatgcagcatatgggctgtgaaccagacacagcttcatacaatatcatggtggatgcctatggaagagctggtcttcatgaagatgcacaaactgtgtttgatgagatgacgcggctggggatagctcctacgatgaaatcctacatgttactcatatcagcctactctagaaacagtaacgtgtcaaaatgtgaagaaatcgtgaatcagatgcagaaatcaggagtgaaactagatacctttcttcttacagcatgctcaacttgtatggtcgtcttggccagtttgctaaaatggaagaaactctgactgtcatagaagctggaccatacgtagccgatatcagcaccctacatatcttgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="26847" stop="24280"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26547" g_stop="26496" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26495" i_stop="26082" i_length="414">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26081" g_stop="25936" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="198" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25935" i_stop="25754" i_length="182">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25753" g_stop="25548" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="404" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25547" i_stop="25303" i_length="245">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25302" g_stop="25178" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="529" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25177" i_stop="24864" i_length="314">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="24863" g_stop="24580" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="812" r_length="283" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E541470" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26547" e_stop="26496"/>
          <exon e_start="26081" e_stop="25936"/>
          <exon e_start="25753" e_stop="25548"/>
          <exon e_start="25302" e_stop="25178"/>
          <exon e_start="24863" e_stop="24580"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAAGTATGTTTTCTTGTTTTCTATTTCCTGTTATACATACTATAGAATCAAATGGCATAATAATCGCAATGCTATGTTAGTGGAAACTTATAACTACTTTCTCTTGGGCCTATGTAAGCTCAATCTCAGCACCTATTGGGTCTAAACCATGCGTAAACTATATTTCTTAAAGTTTCACCAAAAGCTAAACGATATGAAAACTTATATTGCCCAATCACTTAGTGGTGACTGTAGGTATTCTGTTTTGCTAGACTTGTTAGCTGCCTTAACAGTTCTCATAGGTGACTGAAGAAAGGTTCACTATTCTGCCCACACAGATGGAAACAGATGATAAATAGAAGTTAGTTGGATCAACCTTTTATGCAGTCCATATACTTTTCAAGACTCAGCAGAATATGATCTTTCAGCCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAGGTAATACAAGTAGTTAATTTGACTCTTTATATGCTAGTACTTCAAAATAATTCCTGGTGGAATCAAGCTGATAAATTTGATTTATAGACAGTTCATGTGCTAACTCAAGATTTCTATGATGATGTTGCTCCATCTATCTGTCCTTGTGTCTCAGTTGATTGAACAACTTATTCATTATGCAGGAAAATAAGTCCTACATGGCGCTAAAGATGTTCAATGAGATGAAAGCTCAGAAATGTAAACCTAATATCTGTACCTACACAGCTCTTGTAAATGCATTTGCGAGAAGTGGCCTATGTGAAAAGGCTGAAGAAGTCTTTGAAGAGCTACAAGAAGCTGGGTTTGAGCCTGATGTTTACACCTATAATGCCTTGATGGAAGCTTACAGGTGAACACCACTAATGTTTCACTGTTGGACTCCTCTTTAACCATAATAATTGTCAAGATAATCACATCAAACTCATCTTCCATTCCAGTATAAGCTTTAGATCATTATATAAGCTGTACATCAAGCCCTCTTTAACATTTACATTCTTCTGTAGGTCTTTGTAGGGTTATGCTTCTCTTCCTCTAGTTCTTTCTCTGACAAATTTTCTTATCTAAAGGATCTGAATTGATGTTATCGTCTAACAGTCGTGCAGGCTACCCTCAGGGTGCTGCAGAGATCTTTTCTCTCATGCAGCATATGGGCTGTGAACCAGACACAGCTTCATACAATATCATGGTGGATGCCTATGGAAGAGCTGGTCTTCATGAAGGTATTTTTTTTCTCAATGTTAAAAAGGTGTTTCTCTTGCATTTAGTGAACAGAATAGTTTAAGCTCATCTGGACAGCATGATAATTGCAACTTCTGAATGCATATTCATATAACAACCTAAATAAGGGAAGTTTTCAATATGAAACTGATGACAAGTGAAAATGAAAAGTTCAAGAAACAAAGTGCTCTCAACGGTCTCAAGCGATCTATTTCTGTCGACAACAAGTTTAGTGTCCACGGTCTTGTTCAATCCATATGCATTTATGAAAGTTTTCTGACTGTATCTTTTCATTTATCTAAACAATATATACTAGATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTGAAGAAATCGTGAATCAGATGCAGAAATCAGGAGTGAAACTAGATACCTTTCTTCTTAACAGCATGCTCAACTTGTATGGTCGTCTTGGCCAGTTTGCTAAAATGGAAGAACTCTTGACTGTCATAGAAGCTGGACCATACGTAGCCGATATCAGCACCTACAATATCTTGATC</genome_strand>
        <mrna_strand>GAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAG......................................................................................................................................................................................GAAAATAAGTCCTACATGGCGCTAAAGATGTTCAATGAGATGAAAGCTCAGAAATGTAAACCTAATATCTGTACCTACACAGCTCTTGTAAATGCATTTGCGAGAAGTGGCCTATGTGAAAAGGCTGAAGAAGTCTTTGAAGAGCTACAAGAAGCTGGGTTTGAGCCTGATGTTTACACCTATAATGCCTTGATGGAAGCTTACAG.....................................................................................................................................................................................................................................................TCGTGCAGGCTACCCTCAGGGTGCTGCAGAGATCTTTTCTCTCATGCAGCATATGGGCTGTGAACCAGACACAGCTTCATACAATATCATGGTGGATGCCTATGGAAGAGCTGGTCTTCATGAAG..........................................................................................................................................................................................................................................................................................................................ATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTGAAGAAATCGTGAATCAGATGCAGAAATCAGGAGTGAAACTAGATACCTTTCTTCTT-ACAGCATGCTCAACTTGTATGGTCGTCTTGGCCAGTTTGCTAAAATGGAAGAAACTCTGACTGTCATAGAAGCTGGACCATACGTAGCCGATATCAGCACCCTACATATCTTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E297876" ref_strand="+" ref_description="SGN-E297876 [cLET-38-A6]">
      <seq>aaaaggctgaagctgtcttctctgagatgcggaagaatggccttccttcaagtgctcttgtatataatgcttatattgatgggttaatgaagggaagaaattcgcaaaaagcattggcaatctttgataggatgaagcgtgaaagctgccaaccatctactgatacttatacaatgctgatcaacttatatgggaaggaaaataagtcctacatggcgctaaagatgttcaatgagatgaaagctcagaaatgtaaacctaatatctgtacctacacagctcttgtaaatgcatttgcgagaagtggcctatgtgaaaaggctgaagaagtctttgaagagctacaagaagctgggtttgagcctgatgtttacacctataatgccttgatggaagcttacagtcgtgcaggctaccctcagggtgctgcagagatcttttctctcatgcagcatatgggctgtgaaccaaacacagcttcatacaatatcatggtggatgcctatggaagagctggtcttcatgaagatgcacaaactgtgtttgatgagatgacgcggctggggatagctcctacgatgaaatcctacatgttactcatatcagcctactctagaaacagtaacgtgtcaaaatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="26846" stop="24453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26546" g_stop="26496" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26495" i_stop="26082" i_length="414">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26081" g_stop="25936" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="197" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25935" i_stop="25754" i_length="182">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25753" g_stop="25548" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="403" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25547" i_stop="25303" i_length="245">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25302" g_stop="25178" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="528" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25177" i_stop="24864" i_length="314">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="24863" g_stop="24753" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="639" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E297876" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26546" e_stop="26496"/>
          <exon e_start="26081" e_stop="25936"/>
          <exon e_start="25753" e_stop="25548"/>
          <exon e_start="25302" e_stop="25178"/>
          <exon e_start="24863" e_stop="24753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAAGTATGTTTTCTTGTTTTCTATTTCCTGTTATACATACTATAGAATCAAATGGCATAATAATCGCAATGCTATGTTAGTGGAAACTTATAACTACTTTCTCTTGGGCCTATGTAAGCTCAATCTCAGCACCTATTGGGTCTAAACCATGCGTAAACTATATTTCTTAAAGTTTCACCAAAAGCTAAACGATATGAAAACTTATATTGCCCAATCACTTAGTGGTGACTGTAGGTATTCTGTTTTGCTAGACTTGTTAGCTGCCTTAACAGTTCTCATAGGTGACTGAAGAAAGGTTCACTATTCTGCCCACACAGATGGAAACAGATGATAAATAGAAGTTAGTTGGATCAACCTTTTATGCAGTCCATATACTTTTCAAGACTCAGCAGAATATGATCTTTCAGCCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAGGTAATACAAGTAGTTAATTTGACTCTTTATATGCTAGTACTTCAAAATAATTCCTGGTGGAATCAAGCTGATAAATTTGATTTATAGACAGTTCATGTGCTAACTCAAGATTTCTATGATGATGTTGCTCCATCTATCTGTCCTTGTGTCTCAGTTGATTGAACAACTTATTCATTATGCAGGAAAATAAGTCCTACATGGCGCTAAAGATGTTCAATGAGATGAAAGCTCAGAAATGTAAACCTAATATCTGTACCTACACAGCTCTTGTAAATGCATTTGCGAGAAGTGGCCTATGTGAAAAGGCTGAAGAAGTCTTTGAAGAGCTACAAGAAGCTGGGTTTGAGCCTGATGTTTACACCTATAATGCCTTGATGGAAGCTTACAGGTGAACACCACTAATGTTTCACTGTTGGACTCCTCTTTAACCATAATAATTGTCAAGATAATCACATCAAACTCATCTTCCATTCCAGTATAAGCTTTAGATCATTATATAAGCTGTACATCAAGCCCTCTTTAACATTTACATTCTTCTGTAGGTCTTTGTAGGGTTATGCTTCTCTTCCTCTAGTTCTTTCTCTGACAAATTTTCTTATCTAAAGGATCTGAATTGATGTTATCGTCTAACAGTCGTGCAGGCTACCCTCAGGGTGCTGCAGAGATCTTTTCTCTCATGCAGCATATGGGCTGTGAACCAGACACAGCTTCATACAATATCATGGTGGATGCCTATGGAAGAGCTGGTCTTCATGAAGGTATTTTTTTTCTCAATGTTAAAAAGGTGTTTCTCTTGCATTTAGTGAACAGAATAGTTTAAGCTCATCTGGACAGCATGATAATTGCAACTTCTGAATGCATATTCATATAACAACCTAAATAAGGGAAGTTTTCAATATGAAACTGATGACAAGTGAAAATGAAAAGTTCAAGAAACAAAGTGCTCTCAACGGTCTCAAGCGATCTATTTCTGTCGACAACAAGTTTAGTGTCCACGGTCTTGTTCAATCCATATGCATTTATGAAAGTTTTCTGACTGTATCTTTTCATTTATCTAAACAATATATACTAGATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTG</genome_strand>
        <mrna_strand>AAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAG......................................................................................................................................................................................GAAAATAAGTCCTACATGGCGCTAAAGATGTTCAATGAGATGAAAGCTCAGAAATGTAAACCTAATATCTGTACCTACACAGCTCTTGTAAATGCATTTGCGAGAAGTGGCCTATGTGAAAAGGCTGAAGAAGTCTTTGAAGAGCTACAAGAAGCTGGGTTTGAGCCTGATGTTTACACCTATAATGCCTTGATGGAAGCTTACAG.....................................................................................................................................................................................................................................................TCGTGCAGGCTACCCTCAGGGTGCTGCAGAGATCTTTTCTCTCATGCAGCATATGGGCTGTGAACCAAACACAGCTTCATACAATATCATGGTGGATGCCTATGGAAGAGCTGGTCTTCATGAAG..........................................................................................................................................................................................................................................................................................................................ATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E739007" ref_strand="+" ref_description="SGN-E739007 [LC15DB10]">
      <seq>cgtcttggccttatcttcatgttggtctctaaatgtccgctgaatcatatcctttttgaaccaagaatcagtagaggcggattcagatggaaagcaagtgcctccaatgaagttcctgttgagaagtggaagcaagatagcattttcattgatagacgcggcagatttagacaatttgatcacaaaaaagtttcacggaaaagatgtggttctttaaggggcagaggatggaaatatggatctggttttgttgatggtatattcccagttctaagcccaattgctcagcaaattctaacttttataaagacggaaaaagatccagagaggatttggtcttccttggatactctacgtcccaccaataacacttgggatgatctaatcaatgtagcagttcaacttcgactcaacaagcaatgggatctgatcatactgatgtgtgaatggatactgtgcaggagttcctttcaggcagatgtgatttgctacaatttgctcatagaagcttatgggcagagttcacttgttaagaaggcagaatctacttacctggcacttgttgatgctcgatgtgtcccgactgaagatacttatgcacttctcctgaaatcttattcgaaatgtaggatgatagaaaaggctgaagctgtcttctctgagatgcggaagaatggccttccttcaaccatctgcaggtgctcttgtatataatgcttatattgatgggttaatgaagggaagaaattcgcaaaaagcattggcaatctttgataggatgaagcgtgaaagctgccaaccatctactgatacttatacaatgctgatcaacttatatgggaaggaaaataagtcctacatggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="28483" stop="25618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28184" g_stop="28165" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27450" g_stop="27266" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="205" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77">
            <donor d_prob="0.789" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27188" g_stop="26956" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="438" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210">
            <donor d_prob="0.858" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26745" g_stop="26496" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="688" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26495" i_stop="26092" i_length="404">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26091" g_stop="25936" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="689" r_stop="844" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25935" i_stop="25754" i_length="182">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25753" g_stop="25733" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="845" r_stop="865" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E739007" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>865</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E739007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28184" e_stop="28165"/>
          <exon e_start="27450" e_stop="27266"/>
          <exon e_start="27188" e_stop="26956"/>
          <exon e_start="26745" e_stop="26496"/>
          <exon e_start="26091" e_stop="25936"/>
          <exon e_start="25753" e_stop="25733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCCTGGCCTTATCTTCATGTAACTTCTCTTCTCTTTTCTTTTGATGCATTTCGTTCAATCTTGCACTTACCAAAACCCCAAGTTACTGTTTTCTTGAATTTTGAACTCTACTTTCTTTGTTTTTCATTCATTCATAGTTTCTTGAGCTCTGCAGCAGAAAAAAGTTTACATTTTTTTATGTGTTTGGACTCTGTTAGCTGGACTGAGAACTTAGATGGAGTAGTTGTCACTGAAATTAAAATTGGAATGGTTTGTCTCTTATATAGTAGTTACCACTTTTGTCATTCACCCTCATGTACTGCCTGAGTTTCAACATTTCCATCAACTAAGTAACAATTTTCTCAGAAATACACCATGAAATGTTAATTAGACTGATTACTGAATCACAGCCCCTTCTTTATGTGAGTATCTTCTCCACAGCCTAAGAATACTGGTGAGGTACTTGGTACCTGTTGGTGGTGGTAGGTGATAAACACTTTAGGCTATCAAATTTTTAATATTTTTGACAACCTTATAGGAACTTGCTAGGAATTAGTTTATGTTTGATGTGTAGCCATTACATTGCATCATGTAGCAACAAAATCAGTCATGTGCTGTCTTGTTTCTGATATCAAGCATGTGTTACCTTGGGCTGACAAATTGTAACAGTCTCTAAGGTCTGTTCATGCGTCCTGTGACGCATTTTGGAGCATAGGACTAAACAATTTTTCATCTTCGGAGCTGCTATTGTAGGTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGATGTAGGTTGATGTATAATGGCAATAGTTACATATATGTGTTTCTACATCCTGATGTCAAATTCATGACTATTGTGCAGGTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTGGTAAAGATCTTGTGTCTATCGCGCCATTGATTCATATTCTGTCATTGTTCAATTGTCTGTGTGTCCACATATTTATCTCTCAGATTGTCTTAGGATAAGGTTGTATGACTACTCAATTGTCAATAGGATAAGTGTGCTATGTCACTAACTATCCAATCATTCCAGCGTACAAGATGAAGCCTCGCTTAAATAAGTAATACTTCTTTGCAGATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAAGTATGTTTTCTTGTTTTCTATTTCCTGTTATACATACTATAGAATCAAATGGCATAATAATCGCAATGCTATGTTAGTGGAAACTTATAACTACTTTCTCTTGGGCCTATGTAAGCTCAATCTCAGCACCTATTGGGTCTAAACCATGCGTAAACTATATTTCTTAAAGTTTCACCAAAAGCTAAACGATATGAAAACTTATATTGCCCAATCACTTAGTGGTGACTGTAGGTATTCTGTTTTGCTAGACTTGTTAGCTGCCTTAACAGTTCTCATAGGTGACTGAAGAAAGGTTCACTATTCTGCCCACACAGATGGAAACAGATGATAAATAGAAGTTAGTTGGATCAACCTTTTATGCAGTCCATATACTTTTCAAGACTCAGCAGAATATGATCTTTCAGCCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAGGTAATACAAGTAGTTAATTTGACTCTTTATATGCTAGTACTTCAAAATAATTCCTGGTGGAATCAAGCTGATAAATTTGATTTATAGACAGTTCATGTGCTAACTCAAGATTTCTATGATGATGTTGCTCCATCTATCTGTCCTTGTGTCTCAGTTGATTGAACAACTTATTCATTATGCAGGAAAATAAGTCCTACATGGCG</genome_strand>
        <mrna_strand>CGTCTTGGCCTTATCTTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT.............................................................................GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTG..................................................................................................................................................................................................................ATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAA....................................................................................................................................................................................................................................................................................................................................................................................................................CCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAG......................................................................................................................................................................................GAAAATAAGTCCTACATGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E539005" ref_strand="+" ref_description="SGN-E539005 [TUS-58-I16]">
      <seq>tgaggtcctggccttatcttcatgttggtctctaaatgtccgctgaatcatatcctttttgaaccaagaatcagtagaggcggattcagatggaaagcaagtgcctccaatgaagttcctgttgagaagtggaagcaagatagcattttcattgatagacgcggcagatttagacaatttgatcacaaaaaagtttcacggaaaagatgtggttctttaaggggcagaggatggaaatatggatctggttttgttgatggtatattcccagttctaagcccaattgctcagcaaattctaacttttataaagacggaaaaagatccagagaggatttggtcttccttggatactctacgtcccaccaataacacttgggatgatctaatcaatgtagcagttcaacttcgactcaacaagcaatgggatctgatcatactgatgtgtgaatggatactgtgcaggagttcctttcaggcagatgtgatttgctacaatttgctcatagaagcttatgggcagagttcacttgttaagaaggcagaatctacttacctggcacttgttgatgctcgatgtgtcccgactgaagatacttatgcacttctcctgaaatcttattcgaaatgtaggatgatagaaaaggctgaagctgtcttctctgagatgcggaagaatggccttccttcaagtgctcttgtatataatgcttatattgatgggttaatgaagggaagaattcgcnaaaagcattggcaatctttgataggatgaagcgtgaaagctgccaaccatctactgatactttatacatgctgatcaacttatatggggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="28487" stop="25636"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28187" g_stop="28165" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27450" g_stop="27266" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="208" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77">
            <donor d_prob="0.789" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27188" g_stop="26956" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="441" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210">
            <donor d_prob="0.858" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26745" g_stop="26496" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="691" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26495" i_stop="26082" i_length="414">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26081" g_stop="25936" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="837" r_length="146" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E539005" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>837</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28187" e_stop="28165"/>
          <exon e_start="27450" e_stop="27266"/>
          <exon e_start="27188" e_stop="26956"/>
          <exon e_start="26745" e_stop="26496"/>
          <exon e_start="26081" e_stop="25936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGTCCTGGCCTTATCTTCATGTAACTTCTCTTCTCTTTTCTTTTGATGCATTTCGTTCAATCTTGCACTTACCAAAACCCCAAGTTACTGTTTTCTTGAATTTTGAACTCTACTTTCTTTGTTTTTCATTCATTCATAGTTTCTTGAGCTCTGCAGCAGAAAAAAGTTTACATTTTTTTATGTGTTTGGACTCTGTTAGCTGGACTGAGAACTTAGATGGAGTAGTTGTCACTGAAATTAAAATTGGAATGGTTTGTCTCTTATATAGTAGTTACCACTTTTGTCATTCACCCTCATGTACTGCCTGAGTTTCAACATTTCCATCAACTAAGTAACAATTTTCTCAGAAATACACCATGAAATGTTAATTAGACTGATTACTGAATCACAGCCCCTTCTTTATGTGAGTATCTTCTCCACAGCCTAAGAATACTGGTGAGGTACTTGGTACCTGTTGGTGGTGGTAGGTGATAAACACTTTAGGCTATCAAATTTTTAATATTTTTGACAACCTTATAGGAACTTGCTAGGAATTAGTTTATGTTTGATGTGTAGCCATTACATTGCATCATGTAGCAACAAAATCAGTCATGTGCTGTCTTGTTTCTGATATCAAGCATGTGTTACCTTGGGCTGACAAATTGTAACAGTCTCTAAGGTCTGTTCATGCGTCCTGTGACGCATTTTGGAGCATAGGACTAAACAATTTTTCATCTTCGGAGCTGCTATTGTAGGTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGATGTAGGTTGATGTATAATGGCAATAGTTACATATATGTGTTTCTACATCCTGATGTCAAATTCATGACTATTGTGCAGGTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTGGTAAAGATCTTGTGTCTATCGCGCCATTGATTCATATTCTGTCATTGTTCAATTGTCTGTGTGTCCACATATTTATCTCTCAGATTGTCTTAGGATAAGGTTGTATGACTACTCAATTGTCAATAGGATAAGTGTGCTATGTCACTAACTATCCAATCATTCCAGCGTACAAGATGAAGCCTCGCTTAAATAAGTAATACTTCTTTGCAGATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAAGTATGTTTTCTTGTTTTCTATTTCCTGTTATACATACTATAGAATCAAATGGCATAATAATCGCAATGCTATGTTAGTGGAAACTTATAACTACTTTCTCTTGGGCCTATGTAAGCTCAATCTCAGCACCTATTGGGTCTAAACCATGCGTAAACTATATTTCTTAAAGTTTCACCAAAAGCTAAACGATATGAAAACTTATATTGCCCAATCACTTAGTGGTGACTGTAGGTATTCTGTTTTGCTAGACTTGTTAGCTGCCTTAACAGTTCTCATAGGTGACTGAAGAAAGGTTCACTATTCTGCCCACACAGATGGAAACAGATGATAAATAGAAGTTAGTTGGATCAACCTTTTATGCAGTCCATATACTTTTCAAGACTCAGCAGAATATGATCTTTCAGCCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATAC-TTATACAATGCTGATCAACTTATAT-GGGAAG</genome_strand>
        <mrna_strand>TGAGGTCCTGGCCTTATCTTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT.............................................................................GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTG..................................................................................................................................................................................................................ATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAG-AATTCGCNAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTTATAC-ATGCTGATCAACTTATATGGGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737414" ref_strand="+" ref_description="SGN-E737414 [LC09CH05]">
      <seq>gtcctggccttatcttcatgttggtctctaaatgtccgctgaatcatatcctttttgaaccaagaatcagtagaggcggattcagatggaaagcaagtgcctccaatgaagttcctgttgagaagtggaagcaagatagcattttcattgatagacgcggcagatttagacaatttgatcacaaaaaagtttcacggaaaagatgtggttctttaaggggcagaggatggaaatatggatctggttttgttgatggtatattcccagttctaagcccaattgctcagcaaattctaacttttataaagacggaaaaagatccagagaggatttggtcttccttggatactctacgtcccaccaataacacttgggatgatctaatcaatgtagcagttcaacttcgactcaacaagcaatgggatctgatcatactgatgtgtgaatggatactgtgcaggagttcctttcaggcagatgtgatttgctacaatttgctcatagaagcttatgggcagagttcacttgttaagaaggcagaatctacttacctggcacttgttgatgctcgatgtgtcccgactgaagatacttatgcacttctcctgaaatcttattcgaaatgtaggatgatagaaaaggctgaagctgtcttctctgagatgcggaagaatggccttccttcaaccatctgcaggtgctcttgtatataatgcttatattgatgggttaatgaagggaagaaattcgcaaaaagcattggcaatctttgataggatgaagcgtgaaagctgccaaccatctactgatacttatacaatgctgatcaacttatatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="28483" stop="25640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28183" g_stop="28165" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27450" g_stop="27266" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="204" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77">
            <donor d_prob="0.789" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27188" g_stop="26956" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="437" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210">
            <donor d_prob="0.858" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26745" g_stop="26496" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="687" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26495" i_stop="26092" i_length="404">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26091" g_stop="25940" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="688" r_stop="839" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E737414" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28183" e_stop="28165"/>
          <exon e_start="27450" e_stop="27266"/>
          <exon e_start="27188" e_stop="26956"/>
          <exon e_start="26745" e_stop="26496"/>
          <exon e_start="26091" e_stop="25940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTGGCCTTATCTTCATGTAACTTCTCTTCTCTTTTCTTTTGATGCATTTCGTTCAATCTTGCACTTACCAAAACCCCAAGTTACTGTTTTCTTGAATTTTGAACTCTACTTTCTTTGTTTTTCATTCATTCATAGTTTCTTGAGCTCTGCAGCAGAAAAAAGTTTACATTTTTTTATGTGTTTGGACTCTGTTAGCTGGACTGAGAACTTAGATGGAGTAGTTGTCACTGAAATTAAAATTGGAATGGTTTGTCTCTTATATAGTAGTTACCACTTTTGTCATTCACCCTCATGTACTGCCTGAGTTTCAACATTTCCATCAACTAAGTAACAATTTTCTCAGAAATACACCATGAAATGTTAATTAGACTGATTACTGAATCACAGCCCCTTCTTTATGTGAGTATCTTCTCCACAGCCTAAGAATACTGGTGAGGTACTTGGTACCTGTTGGTGGTGGTAGGTGATAAACACTTTAGGCTATCAAATTTTTAATATTTTTGACAACCTTATAGGAACTTGCTAGGAATTAGTTTATGTTTGATGTGTAGCCATTACATTGCATCATGTAGCAACAAAATCAGTCATGTGCTGTCTTGTTTCTGATATCAAGCATGTGTTACCTTGGGCTGACAAATTGTAACAGTCTCTAAGGTCTGTTCATGCGTCCTGTGACGCATTTTGGAGCATAGGACTAAACAATTTTTCATCTTCGGAGCTGCTATTGTAGGTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGATGTAGGTTGATGTATAATGGCAATAGTTACATATATGTGTTTCTACATCCTGATGTCAAATTCATGACTATTGTGCAGGTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTGGTAAAGATCTTGTGTCTATCGCGCCATTGATTCATATTCTGTCATTGTTCAATTGTCTGTGTGTCCACATATTTATCTCTCAGATTGTCTTAGGATAAGGTTGTATGACTACTCAATTGTCAATAGGATAAGTGTGCTATGTCACTAACTATCCAATCATTCCAGCGTACAAGATGAAGCCTCGCTTAAATAAGTAATACTTCTTTGCAGATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAAGTATGTTTTCTTGTTTTCTATTTCCTGTTATACATACTATAGAATCAAATGGCATAATAATCGCAATGCTATGTTAGTGGAAACTTATAACTACTTTCTCTTGGGCCTATGTAAGCTCAATCTCAGCACCTATTGGGTCTAAACCATGCGTAAACTATATTTCTTAAAGTTTCACCAAAAGCTAAACGATATGAAAACTTATATTGCCCAATCACTTAGTGGTGACTGTAGGTATTCTGTTTTGCTAGACTTGTTAGCTGCCTTAACAGTTCTCATAGGTGACTGAAGAAAGGTTCACTATTCTGCCCACACAGATGGAAACAGATGATAAATAGAAGTTAGTTGGATCAACCTTTTATGCAGTCCATATACTTTTCAAGACTCAGCAGAATATGATCTTTCAGCCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGG</genome_strand>
        <mrna_strand>GTCCTGGCCTTATCTTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT.............................................................................GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTG..................................................................................................................................................................................................................ATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAA....................................................................................................................................................................................................................................................................................................................................................................................................................CCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E323570" ref_strand="+" ref_description="SGN-E323570 [cTOC-2-D11]">
      <seq>aacacaaagttgaggtcctggccttatcttcatgttggtctctaaatgtccgctgaatcatatcctttttgaaccaagaatcagtagaggcggattcagatggaaagcaagtgcctccaatgaagttcctgttgagaagtggaagcaagatagcattttcattgatagacgcggcagatttagacaatttgatcacaaaaaagtttcacggaaaagatgtggttctttaaggggcagaggatggaaatatggatctggttttgttgatggtatattcccagttctaagcccaattgctcagcaaattctaacttttataaagacggaaaaagatccagagaggatttggtcttccttggatactctacgtcccaccaataacacttgggatgatctaatcaatgtagcagttcaacttcgactcaacaagcaatgggatctgatcatactgatgtgtgaatggatactgtgcaggagttcctttcaagcagatgtgatttgctacaatttgctcatagaagcttatgggcagagttcacttgttaagaaggcagaatctacttacctggcacttgttgatgctcgatgtgtcccgactgaagatacttatgcacttctcctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="28497" stop="26273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28197" g_stop="28165" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27450" g_stop="27266" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="218" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77">
            <donor d_prob="0.789" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27188" g_stop="26956" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="451" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210">
            <donor d_prob="0.858" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26745" g_stop="26573" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="624" r_length="173" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E323570" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E323570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28197" e_stop="28165"/>
          <exon e_start="27450" e_stop="27266"/>
          <exon e_start="27188" e_stop="26956"/>
          <exon e_start="26745" e_stop="26573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACAAAGTTGAGGTCCTGGCCTTATCTTCATGTAACTTCTCTTCTCTTTTCTTTTGATGCATTTCGTTCAATCTTGCACTTACCAAAACCCCAAGTTACTGTTTTCTTGAATTTTGAACTCTACTTTCTTTGTTTTTCATTCATTCATAGTTTCTTGAGCTCTGCAGCAGAAAAAAGTTTACATTTTTTTATGTGTTTGGACTCTGTTAGCTGGACTGAGAACTTAGATGGAGTAGTTGTCACTGAAATTAAAATTGGAATGGTTTGTCTCTTATATAGTAGTTACCACTTTTGTCATTCACCCTCATGTACTGCCTGAGTTTCAACATTTCCATCAACTAAGTAACAATTTTCTCAGAAATACACCATGAAATGTTAATTAGACTGATTACTGAATCACAGCCCCTTCTTTATGTGAGTATCTTCTCCACAGCCTAAGAATACTGGTGAGGTACTTGGTACCTGTTGGTGGTGGTAGGTGATAAACACTTTAGGCTATCAAATTTTTAATATTTTTGACAACCTTATAGGAACTTGCTAGGAATTAGTTTATGTTTGATGTGTAGCCATTACATTGCATCATGTAGCAACAAAATCAGTCATGTGCTGTCTTGTTTCTGATATCAAGCATGTGTTACCTTGGGCTGACAAATTGTAACAGTCTCTAAGGTCTGTTCATGCGTCCTGTGACGCATTTTGGAGCATAGGACTAAACAATTTTTCATCTTCGGAGCTGCTATTGTAGGTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGATGTAGGTTGATGTATAATGGCAATAGTTACATATATGTGTTTCTACATCCTGATGTCAAATTCATGACTATTGTGCAGGTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTGGTAAAGATCTTGTGTCTATCGCGCCATTGATTCATATTCTGTCATTGTTCAATTGTCTGTGTGTCCACATATTTATCTCTCAGATTGTCTTAGGATAAGGTTGTATGACTACTCAATTGTCAATAGGATAAGTGTGCTATGTCACTAACTATCCAATCATTCCAGCGTACAAGATGAAGCCTCGCTTAAATAAGTAATACTTCTTTGCAGATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAA</genome_strand>
        <mrna_strand>AACACAAAGTTGAGGTCCTGGCCTTATCTTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT.............................................................................GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTG..................................................................................................................................................................................................................ATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAAGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E364791" ref_strand="+" ref_description="SGN-E364791 [cLPT-4-D20]">
      <seq>ctggtcttattttcatgttggtctctaaatgtccgctgaatcatatcctttttgaaccaagaatcagtagaggcggattcagatggaaagcaagtgcctccaatgaagttcctgttgagaagtggaagcaagatagcattttcattgatagacgcggcagatttagacactttgatcacaaaaaagtttcacggaaaagatgtggttctttaaggggcagaggatggaaatatggatctggttttgttgatggtatattcccagttctaagcccaattgctcagcaaattctaacttttataaagacggaaaaagatccagagaggatttggtcttccttggatactctacgtcccaccaatcacacctgggatgatctaatcaatgtagcagttcaacttcgactcaacaaacaatgggatctgatcatactgatgtgtgaatggatactatgcaggagttcctttcaggcagatgtgatttgctacaatttgctcatagaagcttatgggcagagttcacttgttaagaaagcagaatctacttacctggcacttgttgatgctcgatgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="27762" stop="26306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27450" g_stop="27266" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="201" r_length="185" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77">
            <donor d_prob="0.789" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27188" g_stop="26956" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="434" r_length="233" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210">
            <donor d_prob="0.858" d_score="0.98"/>
            <acceptor a_prob="0.723" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26745" g_stop="26606" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="574" r_length="140" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E364791" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27450" e_stop="27266"/>
          <exon e_start="27188" e_stop="26956"/>
          <exon e_start="26745" e_stop="26606"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGATGTAGGTTGATGTATAATGGCAATAGTTACATATATGTGTTTCTACATCCTGATGTCAAATTCATGACTATTGTGCAGGTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTGGTAAAGATCTTGTGTCTATCGCGCCATTGATTCATATTCTGTCATTGTTCAATTGTCTGTGTGTCCACATATTTATCTCTCAGATTGTCTTAGGATAAGGTTGTATGACTACTCAATTGTCAATAGGATAAGTGTGCTATGTCACTAACTATCCAATCATTCCAGCGTACAAGATGAAGCCTCGCTTAAATAAGTAATACTTCTTTGCAGATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGT</genome_strand>
        <mrna_strand>GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACACTTTGATCACAAAAAAGTTTCACGGAAAAGAT.............................................................................GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATCACACCTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAACAATGGGATCTGATCATACTG..................................................................................................................................................................................................................ATGTGTGAATGGATACTATGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAAGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279653" ref_strand="+" ref_description="SGN-E279653 [cLER-5-E20]">
      <seq>gaggtcctggccttatcttcatgttggtctctaaatgtccgctgaatcatatcctttttgaaccaagaatcagtagaggcggattcagatggaaagcaagtgcctccaatgaagttcctgttgagaagtggaagcaagatagcattttcattgatagacgcggcagatttagacaatttgatcacaaaaaagtttcacggaaaagatgtggttctttaaggggcagaggatggaaatatggatctggttttgttgatggtatattcccagttctaagcccaattgctcagcaaattctaacttttataaagacggaaaaagatccagagaggatttggtcttccttggatactctacgtcccaccaataacacttgggatgatctaatcaatgtagcagttcaacttcgactcaacaagcaatgggatctgatcatactgatgtgtgaatggatactgtgcaggagttcctttcaggcagatgtgatttgctacaatttgctcatagaagcttatgggcagagttcacttgttaagaaagcagaatctacttacctggcacttgttgatgctcgatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="28486" stop="26307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28186" g_stop="28165" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27450" g_stop="27266" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="207" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77">
            <donor d_prob="0.789" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27188" g_stop="26956" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="440" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210">
            <donor d_prob="0.858" d_score="1.00"/>
            <acceptor a_prob="0.723" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26745" g_stop="26607" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="579" r_length="139" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E279653" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28186" e_stop="28165"/>
          <exon e_start="27450" e_stop="27266"/>
          <exon e_start="27188" e_stop="26956"/>
          <exon e_start="26745" e_stop="26607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGTCCTGGCCTTATCTTCATGTAACTTCTCTTCTCTTTTCTTTTGATGCATTTCGTTCAATCTTGCACTTACCAAAACCCCAAGTTACTGTTTTCTTGAATTTTGAACTCTACTTTCTTTGTTTTTCATTCATTCATAGTTTCTTGAGCTCTGCAGCAGAAAAAAGTTTACATTTTTTTATGTGTTTGGACTCTGTTAGCTGGACTGAGAACTTAGATGGAGTAGTTGTCACTGAAATTAAAATTGGAATGGTTTGTCTCTTATATAGTAGTTACCACTTTTGTCATTCACCCTCATGTACTGCCTGAGTTTCAACATTTCCATCAACTAAGTAACAATTTTCTCAGAAATACACCATGAAATGTTAATTAGACTGATTACTGAATCACAGCCCCTTCTTTATGTGAGTATCTTCTCCACAGCCTAAGAATACTGGTGAGGTACTTGGTACCTGTTGGTGGTGGTAGGTGATAAACACTTTAGGCTATCAAATTTTTAATATTTTTGACAACCTTATAGGAACTTGCTAGGAATTAGTTTATGTTTGATGTGTAGCCATTACATTGCATCATGTAGCAACAAAATCAGTCATGTGCTGTCTTGTTTCTGATATCAAGCATGTGTTACCTTGGGCTGACAAATTGTAACAGTCTCTAAGGTCTGTTCATGCGTCCTGTGACGCATTTTGGAGCATAGGACTAAACAATTTTTCATCTTCGGAGCTGCTATTGTAGGTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGATGTAGGTTGATGTATAATGGCAATAGTTACATATATGTGTTTCTACATCCTGATGTCAAATTCATGACTATTGTGCAGGTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTGGTAAAGATCTTGTGTCTATCGCGCCATTGATTCATATTCTGTCATTGTTCAATTGTCTGTGTGTCCACATATTTATCTCTCAGATTGTCTTAGGATAAGGTTGTATGACTACTCAATTGTCAATAGGATAAGTGTGCTATGTCACTAACTATCCAATCATTCCAGCGTACAAGATGAAGCCTCGCTTAAATAAGTAATACTTCTTTGCAGATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTG</genome_strand>
        <mrna_strand>GAGGTCCTGGCCTTATCTTCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT.............................................................................GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTG..................................................................................................................................................................................................................ATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAAGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324563" ref_strand="+" ref_description="SGN-E324563 [cTOC-9-H21]">
      <seq>aagaacacaaagttgaggtcctggccttatcggcatgttggtctctaaatgtccgctgaatcatatcctttttgaaccaagaatcagtagaggcggattcagatggaaagcaagtgcctccaatgaagttcctgttgagaagtggaagcaagatagcattttcattgatagacgcggcagatttagacaatttgatcacaaaaaagtttcacggaaaagatgtggttctttaaggggcagaggatggaaatatggatctggttttgttgatggtatattcccagttctaagcccaattgctcagcaaattctaacttttataaagacggaaaaagatccagagaggatttggtcttccttggatactctacgtcccaccaataacacttgggatgatctaatcaatgtagcagttcaacttcgactcaacaagcaatgggatctgatcatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="28500" stop="26657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28200" g_stop="28165" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714">
            <donor d_prob="0.984" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27450" g_stop="27266" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="221" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77">
            <donor d_prob="0.789" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27188" g_stop="26957" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="453" r_length="232" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E324563" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28200" e_stop="28165"/>
          <exon e_start="27450" e_stop="27266"/>
          <exon e_start="27188" e_stop="26957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAACACAAAGTTGAGGTCCTGGCCTTATCTTCATGTAACTTCTCTTCTCTTTTCTTTTGATGCATTTCGTTCAATCTTGCACTTACCAAAACCCCAAGTTACTGTTTTCTTGAATTTTGAACTCTACTTTCTTTGTTTTTCATTCATTCATAGTTTCTTGAGCTCTGCAGCAGAAAAAAGTTTACATTTTTTTATGTGTTTGGACTCTGTTAGCTGGACTGAGAACTTAGATGGAGTAGTTGTCACTGAAATTAAAATTGGAATGGTTTGTCTCTTATATAGTAGTTACCACTTTTGTCATTCACCCTCATGTACTGCCTGAGTTTCAACATTTCCATCAACTAAGTAACAATTTTCTCAGAAATACACCATGAAATGTTAATTAGACTGATTACTGAATCACAGCCCCTTCTTTATGTGAGTATCTTCTCCACAGCCTAAGAATACTGGTGAGGTACTTGGTACCTGTTGGTGGTGGTAGGTGATAAACACTTTAGGCTATCAAATTTTTAATATTTTTGACAACCTTATAGGAACTTGCTAGGAATTAGTTTATGTTTGATGTGTAGCCATTACATTGCATCATGTAGCAACAAAATCAGTCATGTGCTGTCTTGTTTCTGATATCAAGCATGTGTTACCTTGGGCTGACAAATTGTAACAGTCTCTAAGGTCTGTTCATGCGTCCTGTGACGCATTTTGGAGCATAGGACTAAACAATTTTTCATCTTCGGAGCTGCTATTGTAGGTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGATGTAGGTTGATGTATAATGGCAATAGTTACATATATGTGTTTCTACATCCTGATGTCAAATTCATGACTATTGTGCAGGTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACT</genome_strand>
        <mrna_strand>AAGAACACAAAGTTGAGGTCCTGGCCTTATCGGCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT.............................................................................GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709973" ref_strand="+" ref_description="SGN-E709973 [FA53DC01]">
      <seq>cacgctggaaaaaaaacccagaggagcagacttctcacttcagagagcaattcgccaaaaaagcagaagcggtaaagcaggaagatatgagtgcttacaacgcttttaaatcttgtgctccagttgcatggagccctaatctatacataacccttgtaaggggtataccaggcactaggaggctccataggcgtacccttgaggcattgcgtcttggcaaatgcaaccggactgtaatgcgatggaacacacctactgttaggggaatgattcagcaggtgaaaagattggttgtcgttgagacagaagagatgtacaatgcacgtaaggagaaattagctaatcagaaagctctacgtcctcctttggttgtaaatcatcacgcagcccctgcaggtgatccagttcagtaactgttgaaaactcttttctggtcagttttgtaatggtccaacaatgtagtagcctattcagaccttttgctttaagcatgtggtatgaaattgcattgaacctttgtattaaggtggttgttgttattgttttggctataaacgatgcctctggaacaatctagagagttgattaggtccttactggaataaggaacttgaagaaagctgatataagctcgtaaactaaaaactggttctagcccgttgataccacgctaccaggaatgattctgtggtcatgcttaaagaagtgcaatgaaggattgctttatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="30367" stop="34334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30664" g_stop="30721" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30722" i_stop="33234" i_length="2513">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33235" g_stop="33454" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="278" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33455" i_stop="33583" i_length="129">
            <donor d_prob="0.861" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33584" g_stop="34034" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="729" r_length="451" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E709973" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30664" e_stop="30721"/>
          <exon e_start="33235" e_stop="33454"/>
          <exon e_start="33584" e_stop="34034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGCTGGAAAAAAAACCCAGAGGAGCAGACTTCTCACTTCAGAGAGCAATTCGCCAAGTAAGTTCACAATTTTCGTTCATTTTTTCTGTTTAGTACTGCGAATCGATTCTTTTTTGTTTAATTTTTCATTTTGGAACATTTTCATAGCTCAATTGCATCTAGGGGATTATCTTGGACTGTGTGTATGCTTATGGTGAATAAACCTTATGTTTATGATTTTGGGTGTCTATAAAAATGGCTTTTTTAGGGTGTAATGGAATTGAAACCTCTGATTCGTTGATGGGTTCTTTGCTGAATCTGATTTTCAAGATTTTAGGTAGACAGATGAATAGATTTACAATAATAGAAGAAAAAGGATCAGTTTTTGGTTGATAAAAGTTGGGGAAGTGAGATAAAAGTTGAAAGAACCTAAGGTGCTGAGATAAGGAGATCAATACATTTGTAAGGTGTGGATGTTATTATTGGGGTATGTACTAGTGTGGTGACATTATGCTGTGAGCTTGATCCGCAATTCAGTCTCAGTGAACTAGAATGAATAAGAAGTGTGTGAGGTGGACGGAGAGGACTCCTAGATTGAGTGGCAGTGTTGGTTGAAAGTGAATCTCATTCAAACGAGCACTTAGCAGAGCTTGACGTTGTGCTAATGAGTATAGCAAACTGTTTCGCCAGGATTATGTTTACATCTCCGTTGAATAATATCAGTTATTTTATGCGGTAATAGAGGAATGGACATCTTTATATTTGTCTTCACTGTTTGAGGATGCAAGAAACTCGTATCTAGTGATAAGTGGCTAGACAAACTATTTGATCTTGAGAGAAATTTCTCCACACTTTCAAGAGGACCTTTAATTTCGTTTTCTCCCTTCTTTATTTTGGTGTATAAATGTGCCCCTGCCTGGGGTGGAGTTGGAGGATGAGTGACTGAAGCTTTTAAGGTAAAACTTCCTCAATCAGAAGTTTCATACATTTATTTTCTCGAAAGACCCTAATTCTTGTTGATTCTCAAGCTCTTTAATATTTTAATTCACTCAGCTTCAATAGAATGATTACGTATATGCTCATGTAGAGTAAAATGCGTAACTCTCTTACTGTTGACTATTCTCTTTGATTTACTGAGATACTTAGCATTTTTAACGTCACAGAAATGTCCCTGTAACTAATCTTGTCAAAGTAATACAAAGAGACCAGTGTAAAAGAATTTTGGGAAATATGAGAAATCACCAGTGATATTTCATGAAAAGCTAAAATTGGTATGTATAGCAGTGGCTGAGAGGGAAACTAATAGGAGAAATTTGTGTCTATAGTTGAGAAAATGATGTTTTCAATGACTTGTTCTTGAACATTTTTTCAGTTGTGTTCAAAACTGACTAAATTGACAGAGCTTTTATTATGTCTAAATAATTTTAAAAAAAAAACTTAAACAATTGCAGTGATATAATAAGTAAAATCTTAACGGTTTAAACTTGATGGTCCCCGTCATTGGTTCATATCACTGAAGGACTTAGTGGTGGTGCATTATGTTATGTTTTCATATACTGGTTATTATTGTAAAATGTGGGTTTCAAAGTCTAATATTCTAATTCAAGGGTCTCAGGGGTGCCTGTATAAAATCCAGTTTTACTTCTCTTAATGCAGGACTTGCAACATCTTTTTACAAAGTTGTCTAAGTTATTTGACTATTTTAGTTTAGTCTACAGGAAAGTCTTGATTTTGCTTGACTGCTACATGTTTAAGATCTACAACAGCTCTTTAAAACCATGAATGCACATTTCTTCTCATCTATTGCTGTAAGCATACCTCCTACTTCTATCCAGAGCACACAAAAACATTGGGTTCTCTTGTTTCTGTAGCTCTATTCTTTATTTGTTGTTCATTGTTCGGGAATGAGTAGTGTTTTGAGTTGTTCCAGTTTTTTCATAACAAGTGTGTTGAATCATTTTTATCAGCTATTGAAGAATGGATACTTTTTCTTTATCAAAATAATGGATACTCTATTGATTTGAATATGTCTGCAATATGTTCCCTTGCGTATGAACTTGACTTTTTTGTTGGGTGAAGTACGTTAAATAATTTTCGGTAGTGGTGAGACTTGATTCCAACATTTCTCTTGCCTGATGACATGTTGAATTGTATGAATTGACCCATCTTAAGGTTTAAGTTAGGGGACTCATCATTAGAATTTGTTTTCAGTCGTTGGGTGACCTCTTTGGGCTACTACTATATGGAAGTTCTTCTCAGAGGGCAGAATTTCAACTATGCAAATTGCATAATTCAATCTCAAACTTATGAAGTTATCCTGTGTTAATTGTGATGCAGTTTTCTCCCAGTACGGATAATTTTATTACTCTTGAGTGCCTCACTTTTTCTATTGTTGATTTTAAATTATGTACCTGTTTCTTTACTTGTTTAAATTTCATCCCTGCAAATGTAATTCATTCCAATTTCCAGATACCCTACTCTTTCTACTAAGATGCTTGTCACTTTTTCTTAGGAACTATCCTTGCAAATCTTACTCTTTTCGATTGAAATGCTTATTTTGAAGTAAAATTTTCTTTTCTTTTCTGCTTCAGAAAAGCAGAAGCGGTAAAGCAGGAAGATATGAGTGCTTACAACGCTTTTAAATCTTGTGCTCCAGTTGCATGGAGCCCTAATCTATACATAACCCTTGTAAGGGGTATACCAGGCACTAGGAGGCTCCATAGGCGTACCCTTGAGGCATTGCGTCTTGGCAAATGCAACCGGACTGTAATGCGATGGAACACACCTACTGTTAGGGGAATGATTCAGCAGGTTTTAATAGTGCTATGCTATCAATATGGACTAATTTAATGCGTTCTTGCCTTCATCTAGTCTGGTTTATACAACTCTTTTCGTTACCATGTGAAGATTAATATATTTTGTCACTCATTTTGATCTTAGGTGAAAAGATTGGTTGTCGTTGAGACAGAAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGT</genome_strand>
        <mrna_strand>CACGCTGGAAAAAAAACCCAGAGGAGCAGACTTCTCACTTCAGAGAGCAATTCGCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCAGAAGCGGTAAAGCAGGAAGATATGAGTGCTTACAACGCTTTTAAATCTTGTGCTCCAGTTGCATGGAGCCCTAATCTATACATAACCCTTGTAAGGGGTATACCAGGCACTAGGAGGCTCCATAGGCGTACCCTTGAGGCATTGCGTCTTGGCAAATGCAACCGGACTGTAATGCGATGGAACACACCTACTGTTAGGGGAATGATTCAGCAG.................................................................................................................................GTGAAAAGATTGGTTGTCGTTGAGACAGAAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACCACGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712529" ref_strand="+" ref_description="SGN-E712529 [FB05AD10]">
      <seq>gccaaaaaagcagaagcggtaaagcaggaagatatgagtgcttacaacgcttttaaatcttgtgctccagttgcatggagccctaatctatacataacccttgtaaggggtataccaggcactaggaggctccataggcgtacccttgaggcattgcgtcttggcaaatgcaaccggactgtaatgcgatggaacacacctactgttaggggaatgattcagcaggtgaaaagattggttgtcgttgagacagaagagatgtacaatgcacgtaaggagaaattagctaatcagaaagctctacgtcctcctttggttgtaaatcatcacgcagcccctgcaggtgatccagttcagtaactgttgaaaactcttttctggtcagttttgtaatggtccaacaatgtagtagcctattcagaccttttgctttaagcatgtggtatgaaattgcattgaacctttgtattaaggtggttgttgttattgttttggctataaacgatgcctctggaacaatctagagagttgattaggtccttactggaataaggaacttgaagaaagctgatataagctcgtaaactaaaaactggttctagcccgttgatacgaggctaccaggaatgattctgtggtcatgcttaaagaagtgcaatgaaggattgctttatgtttatgtcaaaananaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="32932" stop="34342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32986" g_stop="32990" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="5" r_length="5" r_score="0.600"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32991" i_stop="33234" i_length="244">
            <donor d_prob="0.413" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33235" g_stop="33454" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="225" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33455" i_stop="33583" i_length="129">
            <donor d_prob="0.861" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33584" g_stop="34041" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="683" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="694" polyA_stop="744"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E712529" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32986" e_stop="32990"/>
          <exon e_start="33235" e_stop="33454"/>
          <exon e_start="33584" e_stop="34041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCAGTACGGATAATTTTATTACTCTTGAGTGCCTCACTTTTTCTATTGTTGATTTTAAATTATGTACCTGTTTCTTTACTTGTTTAAATTTCATCCCTGCAAATGTAATTCATTCCAATTTCCAGATACCCTACTCTTTCTACTAAGATGCTTGTCACTTTTTCTTAGGAACTATCCTTGCAAATCTTACTCTTTTCGATTGAAATGCTTATTTTGAAGTAAAATTTTCTTTTCTTTTCTGCTTCAGAAAAGCAGAAGCGGTAAAGCAGGAAGATATGAGTGCTTACAACGCTTTTAAATCTTGTGCTCCAGTTGCATGGAGCCCTAATCTATACATAACCCTTGTAAGGGGTATACCAGGCACTAGGAGGCTCCATAGGCGTACCCTTGAGGCATTGCGTCTTGGCAAATGCAACCGGACTGTAATGCGATGGAACACACCTACTGTTAGGGGAATGATTCAGCAGGTTTTAATAGTGCTATGCTATCAATATGGACTAATTTAATGCGTTCTTGCCTTCATCTAGTCTGGTTTATACAACTCTTTTCGTTACCATGTGAAGATTAATATATTTTGTCACTCATTTTGATCTTAGGTGAAAAGATTGGTTGTCGTTGAGACAGAAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTC</genome_strand>
        <mrna_strand>GCCAA....................................................................................................................................................................................................................................................AAAAGCAGAAGCGGTAAAGCAGGAAGATATGAGTGCTTACAACGCTTTTAAATCTTGTGCTCCAGTTGCATGGAGCCCTAATCTATACATAACCCTTGTAAGGGGTATACCAGGCACTAGGAGGCTCCATAGGCGTACCCTTGAGGCATTGCGTCTTGGCAAATGCAACCGGACTGTAATGCGATGGAACACACCTACTGTTAGGGGAATGATTCAGCAG.................................................................................................................................GTGAAAAGATTGGTTGTCGTTGAGACAGAAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545165" ref_strand="+" ref_description="SGN-E545165 [TUS-67-N24](-)">
      <seq>aagagatgtacaatgcacgtaaggagaaattagctaatcagaaagctctacgtcctcctttggttgtaaatcatcacgcagcccctgcaggtgatccagttcagtaactgttgaaaactcttttctggtcagttttgtaatggtccaacaatgtagtagcctattcagaccttttgctttaagcatgtggtatgaaattgcattgaacctttgtattaaggtggttgttgttattgttttggctataaacgatgcctctggaacaatctagagagttgattaggtccttactggaataaggaacttgaagaaagctgatataagctcgtaaactaaaaactggttctagcccgttgatacgaggctaccaggaatgattctgtggtcatgcttaaagaagtgcaatgaaggattgctttatgtttagtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="33312" stop="34342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33612" g_stop="34052" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E545165" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33612" e_stop="34052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCATGTTAGGAAC</genome_strand>
        <mrna_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTA-GTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545247" ref_strand="+" ref_description="SGN-E545247 [TUS-67-P24](-)">
      <seq>aagagatgtacaatgcacgtaaggagaaattagctaatcagaaagctctacgtcctcctttggttgtaaatcatcacgcagcccctgcaggtgatccagttcagtaactgttgaaaactcttttctggtcagttttgtaatggtccaacaatgtagtagcctattcagaccttttgctttaagcatgtggtatgaaattgcattgaacctttgtattaaggtggttgttgttattgttttggctataaacgatgcctctggaacaatctagagagttgattaggtccttactggaataaggaacttgaagaaagctgatataagctcgtaaactaaaaactggttctagcccgttgatacgaggctaccaggaatgattctgtggtcatgcttaaagaagtgcaatgaaggattgctttatgtttagtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="33312" stop="34342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33612" g_stop="34052" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E545247" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33612" e_stop="34052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCATGTTAGGAAC</genome_strand>
        <mrna_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTA-GTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545166" ref_strand="+" ref_description="SGN-E545166 [TUS-67-N24]">
      <seq>aagagatgtacaatgcacgtaaggagaaattagctaatcagaaagctctacgtcctcctttggttgtaaatcatcacgcagcccctgcaggtgatccagttcagtaactgttgaaaactcttttctggtcagttttgtaatggtccaacaatgtagtagcctattcagaccttttgctttaagcatgtggtatgaaattgcattgaacctttgtattaaggtggttgttgttattgttttggctataaacgatgcctctggaacaatctagagagttgattaggtccttactggaataaggaacttgaagaaagctgatataagctcgtaaactaaaaactggttctagcccgttgatacgaggctaccaggaatgattctgtggtcatgcttaaagaagtgcaatgaaggattgctttatgtttatgtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="33312" stop="34342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33612" g_stop="34052" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E545166" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33612" e_stop="34052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCATGTTAGGAAC</genome_strand>
        <mrna_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E545248" ref_strand="+" ref_description="SGN-E545248 [TUS-67-P24]">
      <seq>aagagatgtacaatgcacgtaaggagaaattagctaatcagaaagctctacgtcctcctttggttgtaaatcatcacgcagcccctgcaggtgatccagttcagtaactgttgaaaactcttttctggtcagttttgtaatggtccaacaatgtagtagcctattcagaccttttgctttaagcatgtggtatgaaattgcattgaacctttgtattaaggtggttgttgttattgttttggctataaacgatgcctctggaacaatctagagagttgattaggtccttactggaataaggaacttgaagaaagctgatataagctcgtaaactaaaaactggttctagcccgttgatacgaggctaccaggaatgattctgtggtcatgcttaaagaagtgcaatgaaggattgctttatgtttatgtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="33312" stop="34342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33612" g_stop="34052" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E545248" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545248" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33612" e_stop="34052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCATGTTAGGAAC</genome_strand>
        <mrna_strand>AAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308302" ref_strand="+" ref_description="SGN-E308302 [cLEZ-6-G1]">
      <seq>tgcacgtaaggagaaattagctaatcagaaagctctacgtcctcctttggttgtaaatcatcacgcagcccctgcaggtgatccagttcagtaactgttgaaaactcttttctggtcagttttgtaatggtccaacaatgtagtagcctattcagaccttttgctttaagcatgtggtcatgaaatagcattgaacctttggattaaggggggtgttgttattgtgttggctataaacgatgcctctggaacaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="33325" stop="34180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33625" g_stop="33880" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="257" r_length="257" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E308302" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33625" e_stop="33880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGT-ATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCT</genome_strand>
        <mrna_strand>TGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTCATGAAATAGCATTGAACCTTTGGATTAAGGGGGGTGTTGTTATTGTGTTGGCTATAAACGATGCCTCTGGAACAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E411002" ref_strand="+" ref_description="SGN-E411002 [PPI-18-P5]">
      <seq>atttggaccctgatattaattctacaatttgtgtctgagcgctttgtgaactcaccctacaagaaaaaaggaatgcgtaaagatggtagattattcagaagagagataagcagaaatgaatctaagtttcgtacacgtctcataagagagtttgatcatcaagaggccactgatgatgatgtattgcttcctttctaggcataaaggagcaaatgaaaaatgtgttgacagatttcttatcccaactacttcaaatgggaactccgcctatgccggagatgtaggtagacaaatggctgaagttggtagttatccaatggatgattttgatgggttggcccctggtacagaaaactttcagaggcctctcgccggggctgattgcactgtgtactctccaatgaagaaaagaacctcagggtactccaccaagtttcttgctggaacagaatttcctcagtcaacagaaggacaaaattttggtccctcttgctctaaattccatgatgtaacaattacaagagtcatgccatataaggatgagctacccaattcttgttatggacataccgagacatacgaagttgaacagggttcaaactttgtgcgagggccaccttcttccattgtgtatagagagaataactttgcatcatctaaaggtatatcttctccatattnnccatctgaatttacnatgaggggcctggatcagcttctgaaggtggaaaatggttctgctttcgcacgatggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="41329" stop="42688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41629" g_stop="42387" g_length="759"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="756" r_length="756" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E411002" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E411002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41629" e_stop="42387"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGGACCCTGATATTAATTCTACAA-TTGTGTCTGAGCGCTTTGTGAACTCACCCTACAAGAAAAAAGGAATGCGTAAAGATGGTAGATTATTCAGAAGAGAGATAAGCGAAAATGAATCTAAGTTTCGTACAGGAATCATAAGAGAGTTTGATCATCAAGAGTCCACTGATGATGATGATGTATGCTTCCTTTCTATGCGTAAAGGAGCAAATGAAAAATGTGCTGACAGATTTCTTATCCCAACTGCTTCAAATGGGAACTCCGCCTATGCCGGAGATGTAGGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGAATGATTTTGATGGGTTGGTCCCTGGTACAGAGAACTTCAAGAGGCCTCTCTCCGGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCCCAGGGTACTCCACCAAATTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAGGGACAAAATCTTGGTCAGTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCAAATTCTTGTTATGGACATACCGAGACATACGAAGTTGAACAGGGTTCAATCTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCTTCTAAAGGTATATCTTCTCCATATTCCCATCCTGAATTTACAAAGAGGGGCCTGGAATCAGCTTCTGAAGGTGGAAAAATGGTTCTGCTTTCGCAAGATGGGT</genome_strand>
        <mrna_strand>ATTTGGACCCTGATATTAATTCTACAATTTGTGTCTGAGCGCTTTGTGAACTCACCCTACAAGAAAAAAGGAATGCGTAAAGATGGTAGATTATTCAGAAGAGAGATAAGCAGAAATGAATCTAAGTTTCGTACACGTCTCATAAGAGAGTTTGATCATCAAGAGGCCACTGATGATGATG-TAT-TGCTTCCTTTCTAGGCATAAAGGAGCAAATGAAAAATGTGTTGACAGATTTCTTATCCCAACTACTTCAAATGGGAACTCCGCCTATGCCGGAGATGTAGGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGGATGATTTTGATGGGTTGGCCCCTGGTACAGAAAACTTTCAGAGGCCTCTCGCCGGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCTCAGGGTACTCCACCAAGTTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAAGGACAAAATTTTGGTCCCTCTTGCTCTAAATTCCATGATGTAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCCAATTCTTGTTATGGACATACCGAGACATACGAAGTTGAACAGGGTTCAAACTTTGTGCGAGGGCCACCTTCTTCCATTGTGTATAGAGAGAATAACTTTGCATCATCTAAAGGTATATCTTCTCCATATTNNCCATCTGAATTTACNATGAGGGGCCTGG-ATCAGCTTCTGAAGGTGG-AAAATGGTTCTGCTTTCGCACGATGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448719" ref_strand="+" ref_description="SGN-E448719 [cSTS-4-C12]">
      <seq>gcgtaaaggagcaaatgaaaaatgtgttgacagatttcttatcccaactgcttcaaatgggaactccgcctatgccggagatgtaggtagacaaatggctgaagttggtagttatccaatggatgattttgatgggttggtccctggtacagaaaactttcagaggcctctcgccagggctgattgcactgtgtactctccaatgaagaaaagaacctcagggtactccaccaagtttcttgctggaacagaatttcctcagtcaacagaaggacaaaattttggtccctcttgctctaaattccatgatgcaacaattacaagagtcatgccatataaggatgagctacccaattcttgttatggacatactgagacatacgaagttgaacagggttcaaactttgtgcgagggccaccttcttccaatgtgtatagagagaataactttgcatcatctaaagatatatcttctccatattcccatcctgaatttacaacgaggggccctggaatcagcttctgaaggtggaaaaatgggtctgctttcgcacgatgggttcagcaatccacctttaaatgttggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="41528" stop="42714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41828" g_stop="42414" g_length="587"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E448719" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448719" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41828" e_stop="42414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTAAAGGAGCAAATGAAAAATGTGCTGACAGATTTCTTATCCCAACTGCTTCAAATGGGAACTCCGCCTATGCCGGAGATGTAGGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGAATGATTTTGATGGGTTGGTCCCTGGTACAGAGAACTTCAAGAGGCCTCTCTCCGGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCCCAGGGTACTCCACCAAATTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAGGGACAAAATCTTGGTCAGTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCAAATTCTTGTTATGGACATACCGAGACATACGAAGTTGAACAGGGTTCAATCTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCTTCTAAAGGTATATCTTCTCCATATTCCCATCCTGAATTTACAAAGAGGGGC-CTGGAATCAGCTTCTGAAGGTGGAAAAATGGTTCTGCTTTCGCAAGATGGGTTCAGCAATCCTCTTATAAATGTTGGAA</genome_strand>
        <mrna_strand>GCGTAAAGGAGCAAATGAAAAATGTGTTGACAGATTTCTTATCCCAACTGCTTCAAATGGGAACTCCGCCTATGCCGGAGATGTAGGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGGATGATTTTGATGGGTTGGTCCCTGGTACAGAAAACTTTCAGAGGCCTCTCGCCAGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCTCAGGGTACTCCACCAAGTTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAAGGACAAAATTTTGGTCCCTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCCAATTCTTGTTATGGACATACTGAGACATACGAAGTTGAACAGGGTTCAAACTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCATCTAAAGATATATCTTCTCCATATTCCCATCCTGAATTTACAACGAGGGGCCCTGGAATCAGCTTCTGAAGGTGGAAAAATGGGTCTGCTTTCGCACGATGGGTTCAGCAATCCACCTTTAAATGTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E422642" ref_strand="+" ref_description="SGN-E422642 [STM-40-B24]">
      <seq>gcgtaaaggagcaaatgaaaaatgtgttgacagatttcttatcccaactgcttcaaatgggaactccgcctatgccggagatgtaggtagacaaatggctgaagttggtagttatccaatggatgattttgatgggttggtccctggtacagaaaactttcagaggcctctcgccagggctgattgcactgtgtactctccaatgaagaaaagaacctcagggtactccaccaagtttcttgctggaacagaatttcctcagtcaacagaaggacaaaattttggtccctcttgctctaaattccatgatgcaacaattacaagagtcatgccatataaggatgagctacccaattcttgttatggacatactgagacatacgaagttgaacagggttcaaactttgtgcgagggccaccttcttccaatgtgtatagagagaataactttgcatcatctaaagatatatcttctccatattcccatcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="41528" stop="42618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41828" g_stop="42318" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E422642" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E422642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41828" e_stop="42318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTAAAGGAGCAAATGAAAAATGTGCTGACAGATTTCTTATCCCAACTGCTTCAAATGGGAACTCCGCCTATGCCGGAGATGTAGGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGAATGATTTTGATGGGTTGGTCCCTGGTACAGAGAACTTCAAGAGGCCTCTCTCCGGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCCCAGGGTACTCCACCAAATTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAGGGACAAAATCTTGGTCAGTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCAAATTCTTGTTATGGACATACCGAGACATACGAAGTTGAACAGGGTTCAATCTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCTTCTAAAGGTATATCTTCTCCATATTCCCATCCTG</genome_strand>
        <mrna_strand>GCGTAAAGGAGCAAATGAAAAATGTGTTGACAGATTTCTTATCCCAACTGCTTCAAATGGGAACTCCGCCTATGCCGGAGATGTAGGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGGATGATTTTGATGGGTTGGTCCCTGGTACAGAAAACTTTCAGAGGCCTCTCGCCAGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCTCAGGGTACTCCACCAAGTTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAAGGACAAAATTTTGGTCCCTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCCAATTCTTGTTATGGACATACTGAGACATACGAAGTTGAACAGGGTTCAAACTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCATCTAAAGATATATCTTCTCCATATTCCCATCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480083" ref_strand="+" ref_description="SGN-E480083 [cSTD-12-H5]">
      <seq>ggtagacaaatggctgaagttggtagttatccaatggatgattttgatgggttggtccctggtacagaaaactttcagaggcctcttgccggggctgattgcactgtgtactctccaatgaagaaaagaacctcagggtactccaccaagtttcttgctggaacagaatttcctcagtcaacagaaggacaaaattttggtccctcttgctctaaattccatgatgcaacaattacaagagtcatgccatataaggatgagctacccaattcttgttatggacataccgagacatacgaagttgaacagtgttcaaactttgtgcgagggccaccttcttccaatgtgtatagagagaataactttgcatcatctaaaggtatatcttttccatattcccatcctgaatttacaacgaggggccctggaatcagccttctgaaagtggaaaaatggttctgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="41613" stop="42675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41913" g_stop="42375" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="465" r_length="465" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E480083" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480083" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41913" e_stop="42375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGAATGATTTTGATGGGTTGGTCCCTGGTACAGAGAACTTCAAGAGGCCTCTCTCCGGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCCCAGGGTACTCCACCAAATTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAGGGACAAAATCTTGGTCAGTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCAAATTCTTGTTATGGACATACCGAGACATACGAAGTTGAACAGGGTTCAATCTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCTTCTAAAGGTATATCTTCTCCATATTCCCATCCTGAATTTACAAAGAGGGG-CCTGGAATCAG-CTTCTGAAGGTGGAAAAATGGTTCTGCTTT</genome_strand>
        <mrna_strand>GGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGGATGATTTTGATGGGTTGGTCCCTGGTACAGAAAACTTTCAGAGGCCTCTTGCCGGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCTCAGGGTACTCCACCAAGTTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAAGGACAAAATTTTGGTCCCTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCCAATTCTTGTTATGGACATACCGAGACATACGAAGTTGAACAGTGTTCAAACTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCATCTAAAGGTATATCTTTTCCATATTCCCATCCTGAATTTACAACGAGGGGCCCTGGAATCAGCCTTCTGAAAGTGGAAAAATGGTTCTGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702262" ref_strand="+" ref_description="SGN-E702262 [FA18BA01]">
      <seq>caggcattttacagttataacctttctaacagaatctcagtcaccccaacaccctcctccgtcccaaaccttcggtgacatctgaagtcgccaccgcctaccgcccgccgtaccacatgcttcggaacctccgaacgcggcggcgtccgctttacggcgcgcacatttgcgccttagcggcagcgattctcctcctcctctctgtttcactcctctacagtcgcctcaacttcttcctccaacctaacaatccccatccgcatcccctccaatacgacaccatttcactgaacaaccctctcgtcgacgatttagctgacgctgattaccgctcctcagatgaccgcattgacgagctcgacgttgctgacagtaacaacaataacgatgatgagttcctcttatccaatgaatccgaagaggacgatgaagaaatcatcaatcaataccctagggtttcgtcgacatatttctacgatcagaggcacggagttgtacggagagcgtttaacaaacgatcaattgaggaatgggaagattacgttaattttgaatcgaggatgaagttaggattagggtttaagagtgatgaatctaaggccgcgtttggatcggatgatcttccagtggatgtgcaaatgaggatgaagttgagcgaaattgagagtgttgaagatgctttgttactaaaaggatcacctttgagggaagggtggggtgagtggtttgaaaagaagagtgattttttgaggcgtgacagaatgttcaagtccaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="44624" stop="45999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44922" g_stop="45699" g_length="778"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="778" r_length="778" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E702262" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44922" e_stop="45699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCATTTTACAGTTATAACCTTTCTAACAGAATCTCAGTCACCCCAACACCCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAAAAGGATCACCTTTGAGGGAAGGGTGGGGTGAGTGGTTTGAAAAGAAGAGTGATTTTTTGAGGCGTGACAGAATGTTCAAGTCAAATCT</genome_strand>
        <mrna_strand>CAGGCATTTTACAGTTATAACCTTTCTAACAGAATCTCAGTCACCCCAACACCCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAAAAGGATCACCTTTGAGGGAAGGGTGGGGTGAGTGGTTTGAAAAGAAGAGTGATTTTTTGAGGCGTGACAGAATGTTCAAGTCCAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E727031" ref_strand="+" ref_description="SGN-E727031 [LA13CB05]">
      <seq>tatcctttctaacagaatctcagtcaccccaacaccctcctccgtcccaaaccttcggtgacatctgaagtcgccaccgcctaccgcccgccgtaccacatgcttcggaacctccgaacgcggcggcgtccgctttacggcgcgcacatttgcgccttagcggcagcgattctcctcctcctctctgtttcactcctctacagtcgcctcaacttcttcctccaacctaacaatccccatccgcatcccctccaatacgacaccatttcactgaacaaccctctcgtcgacgatttagctgacgctgattaccgctcctcagatgaccgcattgacgagctcgacgttgctgacagtaacaacaataacgatgatgagttcctcttatccaatgaatccgaagaggacgatgaagaaatcatcaatcaataccctagggtttcgtcgacatatttctacgatcagaggcacggagttgtacggagagcgtttaacaaacgatcaattgaggaatgggaagattacgttaattttgaatcgaggatgaagttaggattagggtttaagagtgatgaatctaaggccgcgtttggatcggatgatcttccagtggatgtgcaaatgaggatgaagttgagcgaaattgagagtgttgaagatgctttgttactacaaggatcacctttgagggaagggtggggtgagtggtttgaaaagaagagtgattttttgaggcgtgacagaatgttcaagtcaaatctggaggcggtaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="44639" stop="46012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44939" g_stop="45712" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="774" r_length="774" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E727031" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44939" e_stop="45712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACCTTTCTAACAGAATCTCAGTCACCCCAACACCCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAAAAGGATCACCTTTGAGGGAAGGGTGGGGTGAGTGGTTTGAAAAGAAGAGTGATTTTTTGAGGCGTGACAGAATGTTCAAGTCAAATCTGGAGGCGTTAAAT</genome_strand>
        <mrna_strand>TATCCTTTCTAACAGAATCTCAGTCACCCCAACACCCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTACAAGGATCACCTTTGAGGGAAGGGTGGGGTGAGTGGTTTGAAAAGAAGAGTGATTTTTTGAGGCGTGACAGAATGTTCAAGTCAAATCTGGAGGCGGTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335456" ref_strand="+" ref_description="SGN-E335456 [cTOE-2-P24]">
      <seq>cagaatctcagtcaccccaacaccctcctccgtcccaaaccttcggtgacatctgaagtcgccaccgcctaccgcccgccgtaccacatgcttcggaacctccgaacgcggcggcgtccgctttacggcgcgcacatttgcgccttagcggcagcgattctcctcctcctctctgtttcactcctctacagacgcctcaacttcttcctccaacctaacaatccccatccgcatcccctccaatacgacaccatttcactgaacaaccctctcgtcgacgatttagctgacgctgattaccgctcctcagatgaccgcattgacgagctcgacgttgctgacagtaacaacaataacgatgatgagttcctcttatccaatgaatccgaagaggacgatgaagaaatcatcaatcaatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="44651" stop="45671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44951" g_stop="45371" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E335456" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44951" e_stop="45371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATCTCAGTCACCCCAACACCCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACC</genome_strand>
        <mrna_strand>CAGAATCTCAGTCACCCCAACACCCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGACGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E340188" ref_strand="+" ref_description="SGN-E340188 [cTOF-2-E24]">
      <seq>cctcctccgtcccaaaccttcggtgacatctgaagtcgccaccgcctaccgcccgccgtaccacatgcttcggaacctccgaacgcggcggcgtccgctttacggcgcgcacatttgcgccttagcggcagcgattctcctcctcctctctgtttcactcctctacagtcgcctcaacttcttcctccaacctaacaatccccatccgcatcccctccaatacgacaccatttcactgaacaaccctctcgtcgacgatttagctgacgctgattaccgctcctcagatgaccgcattgacgagctcgacgttgctgacagtaacaacaataacgatgatgagttcctcttatccaatgaatccgaagaggacgatgaagaaatcatcaatcaataccctagggtttcgtcgacatatttctacgatcagaggcacggagttgtacggagagcgtttaacaaacgatcaattgaggaatgggaagattacgttaattttgaatcgaggatgaagttaggattagggtttaagagtgatgaatctaaggccgcgtttggatcggatgatcttccagtggatgtgcaaatgaggatgaagttgagcgaaattgagagtgttgaagatgctttgttactaaaaggatcacctttgagggaagggtggggtgagtggtttgaaaagaagagtgattttttgaggcgtgacagaatgttcaagtcaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="44674" stop="45998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44974" g_stop="45698" g_length="725"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="725" r_length="725" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E340188" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44974" e_stop="45698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAAAAGGATCACCTTTGAGGGAAGGGTGGGGTGAGTGGTTTGAAAAGAAGAGTGATTTTTTGAGGCGTGACAGAATGTTCAAGTCAAATC</genome_strand>
        <mrna_strand>CCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAAAAGGATCACCTTTGAGGGAAGGGTGGGGTGAGTGGTTTGAAAAGAAGAGTGATTTTTTGAGGCGTGACAGAATGTTCAAGTCAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212184" ref_strand="+" ref_description="SGN-E212184 [cLEC-75-P20]">
      <seq>aaccttcggtgacatctgaagtcgccaccgcctaccgcccgccgtaccacatgcttcggaacctccgaacgcggcggcgtccgctttacggcgcgcacatttgcgccttagcggcagcgattctcctcctcctctctgtttcactcctctacagtcgcctcaacttcttcctccaacctaacaatccccatccgcatcccctccaatacgacaccatttcactgaacaaccctctcgtcgacgatttagctgacgctgattaccgctcctcagatgaccgcattgacgagctcgacgttgctgacagtaacaacaataacgatgatgagttcctcttatccaatgaatccgaagaggacgatgaagaaatcatcaatcaataccctagggtttcgtcgacatatttctacgatcagaggcacggagttgtacggagagcgtttaacaaacgatcaattgaggaatgggaagattacgttaattttgaatcgaggatgaagttaggattagggtttaagagtgatgaatctaaggccgcgtttggatcggatgatcttccagtggatgtgcaaatgaggatgaagttgagcgaaattgagagtgttgaagatgctttgttactaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="44688" stop="45911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44988" g_stop="45611" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="624" r_length="624" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E212184" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44988" e_stop="45611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAA</genome_strand>
        <mrna_strand>AACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480216" ref_strand="+" ref_description="SGN-E480216 [cSTD-13-M23]">
      <seq>ttttgaggcgtgatagaatgtttaagtcaaatctggaggcgttaaatccaaataataatcccatgttgcaggatcctgatggagccgggactactggattgactaaaggggataggattgtgttaaaagggttgatgaatgagtttaagaaagttccatttctggtgaaaaaaccactttcagtgtctgaattgacaaaatctgagttggttaatgatgctttggagttacagaagatggcagggctggcaaaaaatgatgtgttcgagtcaaaggagttgaaattcaatagtgaattagtgaaaactaatgatgaggatgtgaatagagggaagagagtgaagcgtagaactttaaacgatgatgctagaattggaaaacgagttgttcatgatagtgatggagagtcagctcctaggagtaaggaagagataaggaatggtaatatgaaagctgtgcaagatgatgcccgcggtgaagtttctgggctagtctttgctgatgggaagagatggggttactttccgggcttgcaaccccggttgtctttcactaacttcatggactcatttttcaggaaagcaaaatgtactatgagagttttcatggtctggaattctcccagcatggatgtttaccgctcggtatcagaggggactttgagagtgtacttaaccgtcaccgggatgcttgtgtgggtgtttttctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="45366" stop="46673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45666" g_stop="46373" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="711" r_length="711" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E480216" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45666" e_stop="46373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAGGCGTGACAGAATGTTCAAGTCAAATCTGGAGGCGTTAAATCCAAATAATAATCCCATGTTGCAGGATCCTGATGGAGCAGGGACTACTGGATTGACTAAAGGGGATAAGATTGTGTTAAAAGGGTTGATGAATGAGTTTAAGAAAGTTCCATTTCTGGTGAAAAAACCACTTTCAGTGTCTGAATTGACAAAATCTGAGTTGGTTAATGATGCTTTGGAGTTACAGAAGATGGCGGGATTGGCCAAAAATGATGTTTTCGAGTCAAAGGAGTTGAAATTCAATAGTGATTTGGTGAAAACTAATGATGAGGATGTGAATAGAGGGAAGAGAGTGAAGCGTAGAACTTTAAACGATGATGCTAGAATTGGAAAAAGAGTTGTTCATGATAGTGGTGGAGATTCAGCTCCTAGGAGTAAGGAAGATATAAGGAATGGTAATATGAAAGTTGTGGAAGATGATTCCCGAGGTGAAGTTTCTGGGCTAGTCTTTGCTGATGGGAAGAGATGGGGTTACTTTCCGGGCTTGCACCCCCGGTTGTCTTTCACTAACTTTATGGACTCATTTTTCAGGAAAGCAAAATGTACTATGAGAGTTTTCATGGTCTGGAATTCT-CCAGCATGGATGTTTACGGCTCGGTATCAGAGGGGAC-TTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGT-GGTGGTTTTCTCTG</genome_strand>
        <mrna_strand>TTTTGAGGCGTGATAGAATGTTTAAGTCAAATCTGGAGGCGTTAAATCCAAATAATAATCCCATGTTGCAGGATCCTGATGGAGCCGGGACTACTGGATTGACTAAAGGGGATAGGATTGTGTTAAAAGGGTTGATGAATGAGTTTAAGAAAGTTCCATTTCTGGTGAAAAAACCACTTTCAGTGTCTGAATTGACAAAATCTGAGTTGGTTAATGATGCTTTGGAGTTACAGAAGATGGCAGGGCTGGCAAAAAATGATGTGTTCGAGTCAAAGGAGTTGAAATTCAATAGTGAATTAGTGAAAACTAATGATGAGGATGTGAATAGAGGGAAGAGAGTGAAGCGTAGAACTTTAAACGATGATGCTAGAATTGGAAAACGAGTTGTTCATGATAGTGATGGAGAGTCAGCTCCTAGGAGTAAGGAAGAGATAAGGAATGGTAATATGAAAGCTGTGCAAGATGATGCCCGCGGTGAAGTTTCTGGGCTAGTCTTTGCTGATGGGAAGAGATGGGGTTACTTTCCGGGCTTGCAACCCCGGTTGTCTTTCACTAACTTCATGGACTCATTTTTCAGGAAAGCAAAATGTACTATGAGAGTTTTCATGGTCTGGAATTCTCCCAGCATGGATGTTTACCGCTCGGTATCAGAGGGGACTTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGGTGTTTTTCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E708557" ref_strand="+" ref_description="SGN-E708557 [FA36AD07]">
      <seq>gaagtttctgggctagtctttgctgatgggaagagatggggttactttccgggcttgcacccccggttgtctttcactaactttatggactcatttttcaggaaagcaaaatgtactatgagagttttcatggtctggaattctccagcatggatgtttacggctcggtatcagaggggacttgagagtgtacttaaccgtcaccgggatgcttgtgtggtggttttctctgagacaatcgaacttaatttctttagtggttttgtgaaggatggcttcaaagtggctgttgtgatgcctaatcttgatgagctcctactaggcacaccaacacatgtatttgcttctttctggtatgaatggaagcagacaagacattatcctttccattacagtgaactagtcaggctggcagctctatacaaatatggtggaatctatcttgactcagacatcatagtgttgaattcattgtcttcacttagtaatactgttgcttttgaggatgaccgacgtggaaaaactttgaatggtgctgtaatggcttttagaaagcacagtccttttgtaatggagtgtttgaaggagttttatgcatcttatgacgacacacaattgagatggaatggagctgatcttttgacaagagttgctagtaacttttccgtcaatggtaatctttccagtagaaagagggagatcaaatttcaaccctcgtttgttttcttccccatcggtcataacaatattaccagatacttctcggcaccagcaatggaaactgagaaaactaaacaagatacgctgttcaaaactatcctcaaagaagctgtcacatttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="45842" stop="51226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46142" g_stop="46416" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46417" i_stop="46858" i_length="442">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46859" g_stop="47008" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="425" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47009" i_stop="48057" i_length="1049">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48058" g_stop="48192" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="560" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48193" i_stop="48684" i_length="492">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48685" g_stop="48879" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="755" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50840" g_stop="50926" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="756" r_stop="842" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E708557" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708557" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46142" e_stop="46416"/>
          <exon e_start="46859" e_stop="47008"/>
          <exon e_start="48058" e_stop="48192"/>
          <exon e_start="48685" e_stop="48879"/>
          <exon e_start="50840" e_stop="50926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTTTCTGGGCTAGTCTTTGCTGATGGGAAGAGATGGGGTTACTTTCCGGGCTTGCACCCCCGGTTGTCTTTCACTAACTTTATGGACTCATTTTTCAGGAAAGCAAAATGTACTATGAGAGTTTTCATGGTCTGGAATTCTCCAGCATGGATGTTTACGGCTCGGTATCAGAGGGGACTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGTGGTTTTCTCTGAGACAATCGAACTTAATTTCTTTAGTGGTTTTGTGAAGGATGGGTAAATTACAGAATTTCTTTCTTCCATTAGTTTAGATTTGTTATCTTGTTGGCAGAGGCAGATGTAGAGTACAGGTACCCGGTGCCAAGCATATATTTATGAGTTAAAATCCACAAATATTGCAACAAACAGTAGATATGAACCGATAACTTTAAAAATACAATGAGTTCATTTGCTAAAAGTACCTGGATCTGCCTCTGCTTCTTGTTTGTTTGACTAATATTTTCATCTGAAGTTATCCATATTTGCCTCATGAAAATCATAATCAAAGTGCTTCCAACAAGTCTTAAGTTCTTACTTAAAACAACAGTTTTTTTTTTTGTAAAAGAAGATAATCTCAAGTTCTCTTTGTGTATATACGCATAAATGCATGTCTATGGTGTTTTATTTTTCCAGTTGCACTTTATTAGAGATGGATTTGATGATAGATTATTTTCCGCAGCTTCAAAGTGGCTGTTGTGATGCCTAATCTTGATGAGCTCCTACTAGGCACACCAACACATGTATTTGCTTCTTTCTGGTATGAATGGAAGCAGACAAGACATTATCCTTTCCATTACAGTGAACTAGTCAGGCTGGCAGCTCTATACAAGTAAGCAATTTGGAAAATATACACTTCCCAATGTATTTAAATTGTTATGTACTCTGAAGCTAATCGAGGTGTTATCTCTACGATGATGCATTGTAGTTTTAATTTTAAATGTATTACCTTCCACCTAGTTTGGCATAACAGAGTTAAAAAAATCTAGTGTTTCCTGTATATAACATTTGACTTGAGGTAAGGCAAATTAGATAAGGAGCCCACACTTAAGATCTCGACTATTTATTTCAATAGGTATTATTTGTATAATAGAAAAATGATTCCAATAATTTTTTCGAGATTAATCAGTTGACGGCAGAAACAGTTACCTTCTTTGATGCAATAGATTAACTTCAATTTGCTGAGTTTTTTTTTGTTTTGAGAATTCAATTTGCTGAAGTTTATCTCAATGTGATTGTAATATTTCTCTTTCGGTTTTTGTTTCCCATAGCTGATATTCTTAAACTTGGTCTAGTAAACCACAAGACAGGTTGTTCATGAAGTTAAGAAGTGGAATTGATGATGGTTAGAAACACTTTATAAAAAATAACGGTGAGAGGACTAGTGAAGAAGGATCTAAGTTTTTTCTGAGTCATACAAAAGATTTTGCTGTTACTATATGTCAGTGAATAACTCATTGTTGTGTCTGTGGCACATGGAAAGCTTCTTTTTAAGATCACATAATTCCAGAAATTTGCTGCCTCTAGTGAGTTTTTTTTTATAGCAGAATTACATGAGTTATCCTTAGAGAAAGTAGATTGTGGTGAGGCTGCACCAACATCTCTTGGCAAAGAACCTTATGAAACTAGGATCATGAAATGTGTTACATCTCAATCTTTTCCTTGATTCTCATTAAAGAATTTATTTACCTTATAAAAAAGATTGATTAAAGGAGCATATGAAAGCTGTGGTCTAATGTTCGTGATGAACTTTTGTCCTTTCTATTTCTGCAGGATTATTCTAACTTCAGTAATATGACGACTTAATTTCTTTTGGTGAAGTTTATAGTTGTTGCGTTGTTATAAATAAACTTTCATGTTCTCCTTTTCCTTTAATTGCAGATATGGTGGAATCTATCTTGACTCAGACATCATAGTGTTGAATTCATTGTCTTCACTTAGTAATACTGTTGCTTTTGAGGATGACCGACGTGGAAAAACTTTGAATGGTGCTGTAATGGCTTTTAGAAAGCACAGGTACTTGCAAAACAATCTTTGCCTCTTGAATAGTTCTGAAGTGCTCTGTTCTGGTTCTGGTGTGCTTGGACCTTGCAATAACCACCCTTTCTGTGGCATTTTAGTATGTCCCATGCCTAATATTTTGAGGCCCACTGAGGAAGAGACATGAATAAGGAAAATAGAGGGAATTAGGGAAGGGCTGCTTTATGTGGATAAAATTACACATTCATAAAATAAAGATTGATCGAGGTGCACACAAGCTGAGCAAGATACCACTGTTTCCAAAAATATGTTTGGGTTGTCCTTAGCAGCCTGAAAACGCTATCGAATGCAAGTTTTGAACAATAACCTCGTATTGCACCTGTTAATCTGTCAGAAATATTTGCTACAGTTTATTGCGGGAGAAGGATAGGAAAACAAGTATTCCTAGCAAAAACATATAAATGTAAATTATTTTTCTCTTCTATCTGCCCTATAACCAAGATTCACTTTCTTGTATGTCTTTTGCAGTCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCA</genome_strand>
        <mrna_strand>GAAGTTTCTGGGCTAGTCTTTGCTGATGGGAAGAGATGGGGTTACTTTCCGGGCTTGCACCCCCGGTTGTCTTTCACTAACTTTATGGACTCATTTTTCAGGAAAGCAAAATGTACTATGAGAGTTTTCATGGTCTGGAATTCTCCAGCATGGATGTTTACGGCTCGGTATCAGAGGGGACTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGTGGTTTTCTCTGAGACAATCGAACTTAATTTCTTTAGTGGTTTTGTGAAGGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAAGTGGCTGTTGTGATGCCTAATCTTGATGAGCTCCTACTAGGCACACCAACACATGTATTTGCTTCTTTCTGGTATGAATGGAAGCAGACAAGACATTATCCTTTCCATTACAGTGAACTAGTCAGGCTGGCAGCTCTATACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGGAATCTATCTTGACTCAGACATCATAGTGTTGAATTCATTGTCTTCACTTAGTAATACTGTTGCTTTTGAGGATGACCGACGTGGAAAAACTTTGAATGGTGCTGTAATGGCTTTTAGAAAGCACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688142" ref_strand="+" ref_description="SGN-E688142 [T3_tus_85_N10]">
      <seq>gctcggtatcagaggggacttgagagtgtacttaaccgtcaccgggatgcttgtgtggtggttttctctgagacaatcgaacttaatttctttagtggttttgtgaaggatggcttcaaagtggctgttgtgatgcctaatcttgatgagctcctactaggcacaccaacacatgtatttgcttctttctggtatgaatggaagcagacaagacattatcctttccattacagtgaactagtcaggctggcagctctatacaaatatggtggaatctatcttgactcagacatcatagtgttgaattcattgtcttcacttagtaatactgttgcttttgaggatgaccgacgtggaaaaactttgaatggtgctgtaatggcttttagaaagcacagtccttttgtaatggagtgtttgaaggagttttatgcatcttatgacgacacacaattgagatggaatggagctgatcttttgacaagagttgctagtaacttttccgtcaatggtaatctttccagtagaaagagggagatcaaatttcaaccctcgtttgttttcttccccatcggtcataacaatattaccagatacttctcggcaccagcaatggaaactgagaaaactaaacaagatacgctgttcaaaactatcctcaaagaagctgtcacatttcacttttggaatggcttaacttcagctatggttccagaggctggcagccttgcacaccggctcattaattacaattgcctacgttgctctgacacattgtgaaacaccattaaagcagatggatgaccttttaaagcatttttgttttcatgccattagatatacctcacagcttttaaagatattccggtggtgcttcatccatgaataatatataaattttttgttgtacaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="46004" stop="51461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46304" g_stop="46416" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46417" i_stop="46858" i_length="442">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46859" g_stop="47008" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="263" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47009" i_stop="48057" i_length="1049">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48058" g_stop="48192" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="398" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48193" i_stop="48684" i_length="492">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48685" g_stop="48879" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="593" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="50840" g_stop="51163" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="918" r_length="325" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E688142" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>917</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46304" e_stop="46416"/>
          <exon e_start="46859" e_stop="47008"/>
          <exon e_start="48058" e_stop="48192"/>
          <exon e_start="48685" e_stop="48879"/>
          <exon e_start="50840" e_stop="51163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCGGTATCAGAGGGGACTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGTGGTTTTCTCTGAGACAATCGAACTTAATTTCTTTAGTGGTTTTGTGAAGGATGGGTAAATTACAGAATTTCTTTCTTCCATTAGTTTAGATTTGTTATCTTGTTGGCAGAGGCAGATGTAGAGTACAGGTACCCGGTGCCAAGCATATATTTATGAGTTAAAATCCACAAATATTGCAACAAACAGTAGATATGAACCGATAACTTTAAAAATACAATGAGTTCATTTGCTAAAAGTACCTGGATCTGCCTCTGCTTCTTGTTTGTTTGACTAATATTTTCATCTGAAGTTATCCATATTTGCCTCATGAAAATCATAATCAAAGTGCTTCCAACAAGTCTTAAGTTCTTACTTAAAACAACAGTTTTTTTTTTTGTAAAAGAAGATAATCTCAAGTTCTCTTTGTGTATATACGCATAAATGCATGTCTATGGTGTTTTATTTTTCCAGTTGCACTTTATTAGAGATGGATTTGATGATAGATTATTTTCCGCAGCTTCAAAGTGGCTGTTGTGATGCCTAATCTTGATGAGCTCCTACTAGGCACACCAACACATGTATTTGCTTCTTTCTGGTATGAATGGAAGCAGACAAGACATTATCCTTTCCATTACAGTGAACTAGTCAGGCTGGCAGCTCTATACAAGTAAGCAATTTGGAAAATATACACTTCCCAATGTATTTAAATTGTTATGTACTCTGAAGCTAATCGAGGTGTTATCTCTACGATGATGCATTGTAGTTTTAATTTTAAATGTATTACCTTCCACCTAGTTTGGCATAACAGAGTTAAAAAAATCTAGTGTTTCCTGTATATAACATTTGACTTGAGGTAAGGCAAATTAGATAAGGAGCCCACACTTAAGATCTCGACTATTTATTTCAATAGGTATTATTTGTATAATAGAAAAATGATTCCAATAATTTTTTCGAGATTAATCAGTTGACGGCAGAAACAGTTACCTTCTTTGATGCAATAGATTAACTTCAATTTGCTGAGTTTTTTTTTGTTTTGAGAATTCAATTTGCTGAAGTTTATCTCAATGTGATTGTAATATTTCTCTTTCGGTTTTTGTTTCCCATAGCTGATATTCTTAAACTTGGTCTAGTAAACCACAAGACAGGTTGTTCATGAAGTTAAGAAGTGGAATTGATGATGGTTAGAAACACTTTATAAAAAATAACGGTGAGAGGACTAGTGAAGAAGGATCTAAGTTTTTTCTGAGTCATACAAAAGATTTTGCTGTTACTATATGTCAGTGAATAACTCATTGTTGTGTCTGTGGCACATGGAAAGCTTCTTTTTAAGATCACATAATTCCAGAAATTTGCTGCCTCTAGTGAGTTTTTTTTTATAGCAGAATTACATGAGTTATCCTTAGAGAAAGTAGATTGTGGTGAGGCTGCACCAACATCTCTTGGCAAAGAACCTTATGAAACTAGGATCATGAAATGTGTTACATCTCAATCTTTTCCTTGATTCTCATTAAAGAATTTATTTACCTTATAAAAAAGATTGATTAAAGGAGCATATGAAAGCTGTGGTCTAATGTTCGTGATGAACTTTTGTCCTTTCTATTTCTGCAGGATTATTCTAACTTCAGTAATATGACGACTTAATTTCTTTTGGTGAAGTTTATAGTTGTTGCGTTGTTATAAATAAACTTTCATGTTCTCCTTTTCCTTTAATTGCAGATATGGTGGAATCTATCTTGACTCAGACATCATAGTGTTGAATTCATTGTCTTCACTTAGTAATACTGTTGCTTTTGAGGATGACCGACGTGGAAAAACTTTGAATGGTGCTGTAATGGCTTTTAGAAAGCACAGGTACTTGCAAAACAATCTTTGCCTCTTGAATAGTTCTGAAGTGCTCTGTTCTGGTTCTGGTGTGCTTGGACCTTGCAATAACCACCCTTTCTGTGGCATTTTAGTATGTCCCATGCCTAATATTTTGAGGCCCACTGAGGAAGAGACATGAATAAGGAAAATAGAGGGAATTAGGGAAGGGCTGCTTTATGTGGATAAAATTACACATTCATAAAATAAAGATTGATCGAGGTGCACACAAGCTGAGCAAGATACCACTGTTTCCAAAAATATGTTTGGGTTGTCCTTAGCAGCCTGAAAACGCTATCGAATGCAAGTTTTGAACAATAACCTCGTATTGCACCTGTTAATCTGTCAGAAATATTTGCTACAGTTTATTGCGGGAGAAGGATAGGAAAACAAGTATTCCTAGCAAAAACATATAAATGTAAATTATTTTTCTCTTCTATCTGCCCTATAACCAAGATTCACTTTCTTGTATGTCTTTTGCAGTCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAA-TTTTTGTTGTACAAAATATG</genome_strand>
        <mrna_strand>GCTCGGTATCAGAGGGGACTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGTGGTTTTCTCTGAGACAATCGAACTTAATTTCTTTAGTGGTTTTGTGAAGGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAAGTGGCTGTTGTGATGCCTAATCTTGATGAGCTCCTACTAGGCACACCAACACATGTATTTGCTTCTTTCTGGTATGAATGGAAGCAGACAAGACATTATCCTTTCCATTACAGTGAACTAGTCAGGCTGGCAGCTCTATACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGGAATCTATCTTGACTCAGACATCATAGTGTTGAATTCATTGTCTTCACTTAGTAATACTGTTGCTTTTGAGGATGACCGACGTGGAAAAACTTTGAATGGTGCTGTAATGGCTTTTAGAAAGCACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTTGTTGTACAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335968" ref_strand="+" ref_description="SGN-E335968 [cTOE-6-D7]">
      <seq>ctcggtatcagaggggacttgagagtgtacttaaccgtcaccgggatgcttgtgtggtggttttctctgagacaatcgaacttaatttctttagtggttttgtgaaggatggcttcaaagtggctgttgtgatgcctaatcttgatgagctcctactaggcacaccaacacatgtatttgcttctttctggtatgaatggaagcagacaagacattatcctttccattacagtgaactagtcaggctggcagctctatacaaatatggtggaatctatcttgactcagacatcatagtgttgaattcattgtcttcacttagtaatactgttgcttttgaggatgaccgacgtggaaaaactttgaatggtgctgtaatggctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="46005" stop="48481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46305" g_stop="46416" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46417" i_stop="46858" i_length="442">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46859" g_stop="47008" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="262" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47009" i_stop="48057" i_length="1049">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48058" g_stop="48181" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="386" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E335968" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335968" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46305" e_stop="46416"/>
          <exon e_start="46859" e_stop="47008"/>
          <exon e_start="48058" e_stop="48181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGGTATCAGAGGGGACTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGTGGTTTTCTCTGAGACAATCGAACTTAATTTCTTTAGTGGTTTTGTGAAGGATGGGTAAATTACAGAATTTCTTTCTTCCATTAGTTTAGATTTGTTATCTTGTTGGCAGAGGCAGATGTAGAGTACAGGTACCCGGTGCCAAGCATATATTTATGAGTTAAAATCCACAAATATTGCAACAAACAGTAGATATGAACCGATAACTTTAAAAATACAATGAGTTCATTTGCTAAAAGTACCTGGATCTGCCTCTGCTTCTTGTTTGTTTGACTAATATTTTCATCTGAAGTTATCCATATTTGCCTCATGAAAATCATAATCAAAGTGCTTCCAACAAGTCTTAAGTTCTTACTTAAAACAACAGTTTTTTTTTTTGTAAAAGAAGATAATCTCAAGTTCTCTTTGTGTATATACGCATAAATGCATGTCTATGGTGTTTTATTTTTCCAGTTGCACTTTATTAGAGATGGATTTGATGATAGATTATTTTCCGCAGCTTCAAAGTGGCTGTTGTGATGCCTAATCTTGATGAGCTCCTACTAGGCACACCAACACATGTATTTGCTTCTTTCTGGTATGAATGGAAGCAGACAAGACATTATCCTTTCCATTACAGTGAACTAGTCAGGCTGGCAGCTCTATACAAGTAAGCAATTTGGAAAATATACACTTCCCAATGTATTTAAATTGTTATGTACTCTGAAGCTAATCGAGGTGTTATCTCTACGATGATGCATTGTAGTTTTAATTTTAAATGTATTACCTTCCACCTAGTTTGGCATAACAGAGTTAAAAAAATCTAGTGTTTCCTGTATATAACATTTGACTTGAGGTAAGGCAAATTAGATAAGGAGCCCACACTTAAGATCTCGACTATTTATTTCAATAGGTATTATTTGTATAATAGAAAAATGATTCCAATAATTTTTTCGAGATTAATCAGTTGACGGCAGAAACAGTTACCTTCTTTGATGCAATAGATTAACTTCAATTTGCTGAGTTTTTTTTTGTTTTGAGAATTCAATTTGCTGAAGTTTATCTCAATGTGATTGTAATATTTCTCTTTCGGTTTTTGTTTCCCATAGCTGATATTCTTAAACTTGGTCTAGTAAACCACAAGACAGGTTGTTCATGAAGTTAAGAAGTGGAATTGATGATGGTTAGAAACACTTTATAAAAAATAACGGTGAGAGGACTAGTGAAGAAGGATCTAAGTTTTTTCTGAGTCATACAAAAGATTTTGCTGTTACTATATGTCAGTGAATAACTCATTGTTGTGTCTGTGGCACATGGAAAGCTTCTTTTTAAGATCACATAATTCCAGAAATTTGCTGCCTCTAGTGAGTTTTTTTTTATAGCAGAATTACATGAGTTATCCTTAGAGAAAGTAGATTGTGGTGAGGCTGCACCAACATCTCTTGGCAAAGAACCTTATGAAACTAGGATCATGAAATGTGTTACATCTCAATCTTTTCCTTGATTCTCATTAAAGAATTTATTTACCTTATAAAAAAGATTGATTAAAGGAGCATATGAAAGCTGTGGTCTAATGTTCGTGATGAACTTTTGTCCTTTCTATTTCTGCAGGATTATTCTAACTTCAGTAATATGACGACTTAATTTCTTTTGGTGAAGTTTATAGTTGTTGCGTTGTTATAAATAAACTTTCATGTTCTCCTTTTCCTTTAATTGCAGATATGGTGGAATCTATCTTGACTCAGACATCATAGTGTTGAATTCATTGTCTTCACTTAGTAATACTGTTGCTTTTGAGGATGACCGACGTGGAAAAACTTTGAATGGTGCTGTAATGGCTTTT</genome_strand>
        <mrna_strand>CTCGGTATCAGAGGGGACTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGTGGTTTTCTCTGAGACAATCGAACTTAATTTCTTTAGTGGTTTTGTGAAGGATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAAAGTGGCTGTTGTGATGCCTAATCTTGATGAGCTCCTACTAGGCACACCAACACATGTATTTGCTTCTTTCTGGTATGAATGGAAGCAGACAAGACATTATCCTTTCCATTACAGTGAACTAGTCAGGCTGGCAGCTCTATACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGGAATCTATCTTGACTCAGACATCATAGTGTTGAATTCATTGTCTTCACTTAGTAATACTGTTGCTTTTGAGGATGACCGACGTGGAAAAACTTTGAATGGTGCTGTAATGGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371473" ref_strand="+" ref_description="SGN-E371473 [TUS-29-P14]">
      <seq>tgctacagtttattgcgggagaaggatagaaacacaacccttttgtaatggagtgtttgaaggagccttatgacgacacacaattgagatggaatgtagctgatcttttgacaagagttgctagtaaattttccgtcaatggtaatctttccggtagaaagagggagatcaaatttcaaccctcgtttgtttacttccctatcggtcataacaatattaccagatacttctcggcaccagcaacggaaactgagaaagctaaacaagatacgctgttcaaaactatcctcaaagaagccgtcacatttcacttttggaatggcttaacttcggctatggttccagaggctggcagccttgcacaccggctcattaattacaattgcctacgttgctctgacacattgtgaaacaccattaaagcagatggatgaccttttaaagcatttttgttttcatgccattagatatacctcacagcttttaaagatattccggtggttcttcatccataatttttgttgtacaaaatatgaatctccagttggttgcctttctggaccttgtgtttttagtctatattagttgttgtagattccctcgagggacgaattaagaggtcctgctttttgtagctgagttcttactgtatatttccccttgtgagttttgtagaactatttgtagtcattggcaacaggacaatgatatatttaaatgatgttttttgtatgtacccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="48258" stop="51652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48558" g_stop="48594" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48595" i_stop="48684" i_length="90">
            <donor d_prob="0.314" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48685" g_stop="48879" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="223" r_length="186" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50840" g_stop="51347" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="728" r_length="505" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="740" polyA_stop="750"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E371473" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48558" e_stop="48594"/>
          <exon e_start="48685" e_stop="48879"/>
          <exon e_start="50840" e_stop="51347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTACAGTTTATTGCGGGAGAAGGATAGGAAAACAAGTATTCCTAGCAAAAACATATAAATGTAAATTATTTTTCTCTTCTATCTGCCCTATAACCAAGATTCACTTTCTTGTATGTCTTTTGCAGTCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACC--------TT-GTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTT</genome_strand>
        <mrna_strand>TGCTACAGTTTATTGCGGGAGAAGGATAGAAACACAA..........................................................................................CCCTTTTGTAATGGAGTGTTTGAA-G-G----A-GC--CTTATGACGACACACAATTGAGATGGAATGTAGCTGATCTTTTGACAAGAGTTGCTAGTAAATTTTCCGTCAATGGTAATCTTTCCGGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTACTTCCCTATCGGTCATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCGGCACCAGCAACGGAAACTGAGAAAGCTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCCGTCACATTTCACTTTTGGAATGGCTTAACTTCGGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTTCTTCATCC-----------AT-AATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGCCTTTCTGGACCTTGTGTTTTTAGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371097" ref_strand="+" ref_description="SGN-E371097 [TUS-29-P13]">
      <seq>tgctacagtttattgcgggagaaggatagaaacacaacccttttgtaatggagtgtttgaaggagccttatgacgacacacaattgagatggaatgtagctgatcttttgacaagagttgctagtaaattttccgtcaatggtaatctttccggtagaaagagggagatcaaatttcaaccctcgtttgtttacttccctatcggtcataacaatattaccagatacttctcggcaccagcaacggaaactgagaaagctaaacaagatacgctgttcaaaactatcctcaaagaagccgtcacatttcacttttggaatggcttaacttcggctatggttccagaggctggcagccttgcacaccggctcattaattacaattgcctacgttgctctgacacattgtgaaacaccattaaagcagatggatgaccttttaaagcatttttgttttcatgccattagatatacctcacagcttttaaagatattccggtggttcttcatccataatttttgttgtacaaaatatgaatctccagttggttgcctttctggaccttgtgtttttagtctatattagttgttgtagattccctcgagggacgaattaagaggtcctgctttttgtagctgagttcttactgtatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="48258" stop="51574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48558" g_stop="48594" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48595" i_stop="48684" i_length="90">
            <donor d_prob="0.314" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48685" g_stop="48879" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="223" r_length="186" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50840" g_stop="51274" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="655" r_length="432" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E371097" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48558" e_stop="48594"/>
          <exon e_start="48685" e_stop="48879"/>
          <exon e_start="50840" e_stop="51274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTACAGTTTATTGCGGGAGAAGGATAGGAAAACAAGTATTCCTAGCAAAAACATATAAATGTAAATTATTTTTCTCTTCTATCTGCCCTATAACCAAGATTCACTTTCTTGTATGTCTTTTGCAGTCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACC-T-TG----T---CTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATT</genome_strand>
        <mrna_strand>TGCTACAGTTTATTGCGGGAGAAGGATAGAAACACAA..........................................................................................CCCTTTTGTAATGGAGTGTTTGAA-G-G----A-GC--CTTATGACGACACACAATTGAGATGGAATGTAGCTGATCTTTTGACAAGAGTTGCTAGTAAATTTTCCGTCAATGGTAATCTTTCCGGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTACTTCCCTATCGGTCATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCGGCACCAGCAACGGAAACTGAGAAAGCTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCCGTCACATTTCACTTTTGGAATGGCTTAACTTCGGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTTCTTCATCC-----------AT-AATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGCCTTTCTGGACCTTGTGTTTTTAGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E282649" ref_strand="+" ref_description="SGN-E282649 [cLER-15-G12]">
      <seq>tgctacagtttattgcgggagaaggatagaaacacaacccttttgtaatggagtgtttgaaggagccttatgacgacacacaattgagatggaatgtagctgatcttttgacaagagttgctagtaaattttccgtcaatggtaatctttccggtagaaagagggagatcaaatttcaaccctcgtttgtttacttccctatcggtcataacaatattaccagatacttctcggcaccagcaacggaaactgagaaagctaaacaagatacgctgttcaaaactatcctcaaagaagccgtcacatttcacttttggaatggcttaacttcggctatggttccagaggctggcagccttgcacaccggctcattaattacaattgcctacgttgctctgacacattgtgaaacaccattaaagcagatggatgaccttttaaagcatttttgttttcatgccattagatatacctcacagcttttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="48258" stop="51403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48558" g_stop="48594" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48595" i_stop="48684" i_length="90">
            <donor d_prob="0.314" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48685" g_stop="48879" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="223" r_length="186" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50840" g_stop="51103" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="487" r_length="264" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E282649" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E282649" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48558" e_stop="48594"/>
          <exon e_start="48685" e_stop="48879"/>
          <exon e_start="50840" e_stop="51103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTACAGTTTATTGCGGGAGAAGGATAGGAAAACAAGTATTCCTAGCAAAAACATATAAATGTAAATTATTTTTCTCTTCTATCTGCCCTATAACCAAGATTCACTTTCTTGTATGTCTTTTGCAGTCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAA</genome_strand>
        <mrna_strand>TGCTACAGTTTATTGCGGGAGAAGGATAGAAACACAA..........................................................................................CCCTTTTGTAATGGAGTGTTTGAA-G-G----A-GC--CTTATGACGACACACAATTGAGATGGAATGTAGCTGATCTTTTGACAAGAGTTGCTAGTAAATTTTCCGTCAATGGTAATCTTTCCGGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTACTTCCCTATCGGTCATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCGGCACCAGCAACGGAAACTGAGAAAGCTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCCGTCACATTTCACTTTTGGAATGGCTTAACTTCGGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371472" ref_strand="+" ref_description="SGN-E371472 [TUS-29-P14](-)">
      <seq>cagtttattgcgggaaaaggatagaaacacaacccttttgtaatggagtgtttgaaggagccttatgacgacacacaattgagatggaatgtagctgatcttttgacaagagttgctagtaaattttccgtcaatggtaatctttccggtagaaagagggagatcaaatttcaaccctcgtttgtttacttccctatcggtcataacaatattaccagatacttctcggcaccagcaacggaaactgagaaagctaaacaagatacgctgttcaaaactatcctcaaagaagccgtcacatttcacttttggaatggcttaacttcggctatggttccagaggctggcagccttgcacaccggctcattaattacaattgcctacgttgctctgacacattgtgaaacaccattaaagcagatggatgaccttttaaagcatttttgttttcatgccattagatatacctcacagcttttaaagatattccggtggttcttcatccataatttttgttgtacaaaatatgaatctccagttggttgcctttctggaccttgtgtttttagtctatattagttgttgtagattccctcgagggacgaattaagaggtcctgctttttgtagctgagttcttactgtatatttccccttgtgagttttgtagaactatttgtagtcattggcaacaggacaatgatatatttaaatgatgttcttgtatgtaaccaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="48382" stop="51652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48563" g_stop="48594" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48595" i_stop="48684" i_length="90">
            <donor d_prob="0.314" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48685" g_stop="48879" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="218" r_length="186" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50840" g_stop="51352" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="728" r_length="510" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E371472" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48563" e_stop="48594"/>
          <exon e_start="48685" e_stop="48879"/>
          <exon e_start="50840" e_stop="51352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTTTATTGCGGGAGAAGGATAGGAAAACAAGTATTCCTAGCAAAAACATATAAATGTAAATTATTTTTCTCTTCTATCTGCCCTATAACCAAGATTCACTTTCTTGTATGTCTTTTGCAGTCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACC--------TT-GTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</genome_strand>
        <mrna_strand>CAGTTTATTGCGGGAAAAGGATAGAAACACAA..........................................................................................CCCTTTTGTAATGGAGTGTTTGAA-G-G----A-GC--CTTATGACGACACACAATTGAGATGGAATGTAGCTGATCTTTTGACAAGAGTTGCTAGTAAATTTTCCGTCAATGGTAATCTTTCCGGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTACTTCCCTATCGGTCATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCGGCACCAGCAACGGAAACTGAGAAAGCTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCCGTCACATTTCACTTTTGGAATGGCTTAACTTCGGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTTCTTCATCC-----------AT-AATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGCCTTTCTGGACCTTGTGTTTTTAGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371796" ref_strand="+" ref_description="SGN-E371796 [TUS-30-A17]">
      <seq>agtttattgcgggagaaggatagaaacacaacccttttgtaatggagtgtttgaaggagccttatgacgacacacaatcgagatggaatgtagctgatcttttgacaagagttgctagtaaattttccgtcaatggtaatctttccggtagaaagagggagatcaaatttcaaccctcctttgcttacttccctatcggacataacaatattaccagatacttctccgcaccatctacggacactgagaaagctaaacaagatacgctgttcaaaactatcctcaaagaagccgccacatttgacttttggaatggcttaacttcggctatggttccagaggctggcacccttgctcaccggctcattaattacaattgcctacgttgctctgacacattgagaaacaccattaaagcagatggatgaccttttaaagcattattgttttcatgccattagatatacctcacagctattaaagatattccggtggttctttatacataatatttgttgttcaaaatatgaatctccagttggatgtctttctggaccttgtgttaatagtctatattaggtgttgtagattccctcgagggacgaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="48264" stop="51534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48564" g_stop="48594" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48595" i_stop="48684" i_length="90">
            <donor d_prob="0.314" d_score="0.00"/>
            <acceptor a_prob="0.977" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48685" g_stop="48879" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="217" r_length="186" r_score="0.903"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50840" g_stop="51193" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="559" r_length="342" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E371796" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48564" e_stop="48594"/>
          <exon e_start="48685" e_stop="48879"/>
          <exon e_start="50840" e_stop="51193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTATTGCGGGAGAAGGATAGGAAAACAAGTATTCCTAGCAAAAACATATAAATGTAAATTATTTTTCTCTTCTATCTGCCCTATAACCAAGATTCACTTTCTTGTATGTCTTTTGCAGTCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACCTT</genome_strand>
        <mrna_strand>AGTTTATTGCGGGAGAAGGATAGAAACACAA..........................................................................................CCCTTTTGTAATGGAGTGTTTGAA-G-G----A-GC--CTTATGACGACACACAATCGAGATGGAATGTAGCTGATCTTTTGACAAGAGTTGCTAGTAAATTTTCCGTCAATGGTAATCTTTCCGGTAGAAAGAGGGAGATCAAATTTCAACCCTCCTTTGCTTACTTCCCTATCGGACATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCCGCACCATCTACGGACACTGAGAAAGCTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCCGCCACATTTGACTTTTGGAATGGCTTAACTTCGGCTATGGTTCCAGAGGCTGGCACCCTTGCTCACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGAGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTATTGTTTTCATGCCATTAGATATACCTCACAGCTATTAAAGATATTCCGGT-G-G-TTC-T---T---T-ATACAT-AATATTTGTTGTTCAAAATATGAATCTCCAGTTGGATGTCTTTCTGGACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371096" ref_strand="+" ref_description="SGN-E371096 [TUS-29-P13](-)">
      <seq>ggagccttatgacgacacacaattgagatggaatgtagctgatcttttgacaagagttgctagtaaattttccgtcaatggtaatctttccggtagaaagagggagatcaaatttcaaccctcgtttgtttacttccctatcggtcataacaatattaccagatacttctcggcaccagcaacggaaactgagaaagctaaacaagatacgctgttcaaaactatcctcaaagaagccgtcacatttcacttttggaatggcttaacttcggctatggttccagaggctggcagccttgcacaccggctcattaattacaattgcctacgttgctctgacacattgtgaaacaccattaaagcagatggatgaccttttaaagcatttttgttttcatgccattagatatacctcacagcttttaaagatattccggtggttcttcatccataatttttgttgtacaaaatatgaatctccagttggttgcctttctggaccttgtgtttttagtctatattagttgttgtagattccctcgagggacgaattaagaggtcctgctttttgtagctgagttcttactgtatatttccccttgtgagttttgtagaactatttgtagtcattggcaacaggacaatgatatatttaaatgatgttcttgtatgtaaccaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="48423" stop="51652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48718" g_stop="48879" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50840" g_stop="51352" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="672" r_length="510" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E371096" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48718" e_stop="48879"/>
          <exon e_start="50840" e_stop="51352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAGGTACCAAACTTAACATCCTTCTTAATCTTGAGGTCAAAAGTATTAAAAGGTGGTACTTAGAATTGTGAGTGCTTAAATTTTTCAGTGAAAGATTTATTATTTATTATTTTGAACGCTTGATTATTGTTCATACCGTTGAATGGGGAAGTGTGTAGGCGGGTTAAGAACTCACACGTCTAGAAGATGAAAGTAGCAGAAGTGTTGAGATGGATGTGTGGGATACTAGGAGAGATATGATCAACAATGAAGACATTTGGGACAAGGCGGGTGTGGCCTCCATGGTGGACCAGATGAGGGAAGTGAGGAAGTGAGGAAGTGATGGTTCGAGCATATGAAGAGGAGATGCACAAATGTCACGCAGAGGAGGTGTGAGAGGTTGACAATTGTGGTTTGAGGAGAGGTAGCGCTAGGCCGAAAAAGTATTAACGAGATGTGATTAGATAAAGCATGACACATTTGCAGCTTATTGAGGACATGTCCCTAGATAAAAAGGTCCAAGATTAAGGTAGAATGCTAGTAGGTAGTCGAGTATTATTAGTAATTTAGTACTACTCTCTTATTATTCTTCAATTTTATTATTGCATGTTGTTTTCTTTGCTTCAGTTATCGTATTTGTGTTGTTGAGATTATTTTCAGCATGGCTTCTTTACTATTGTATCCTCTTTTCAACCTTCTTGAAATGCTTTACTTGAGCTGAGAATCTTCCGTAAACAATCTCTCAACCTACCAAGGTAGGGGTAAAGTTTGCTTACACACCACCCTCCTCAAACCTCACTTGTGGGATTACAGTAGGTATGTTATTGTAGTTGTTGATTATAGCACACATGGCTTTTAGTTCAGAATATGGCTTTAAGAATCTTATCTCTATTTGAAAACTACAGTTGTATGGTTAACAGAACTTAAATATTGCAAATTTTGTCCCAGAACAGGTCACTTGTTCAAAACTTTGAAAACTCAGTCTAGTTAGAGCTTCCTGATTTTAGCAGAACCTTCAAAAAAAAAAAAATGAAATTAAGGAGTGAAATTCTATCTATCCCCCCTGTAAATAGAATTATCCCTCTTAGAGCCCAGCAATTTATCCCTGGATTTCATTAGCTCCCACAATATGGCTTAGAGACCATACATTTGCTTGTGGTTAACCCCCTGACTAAATTGGAGTTTCTGCAACATCTTACTTCATCAAAAATAATAAATTCATCTATCCAAGGACTTGTATTCTCTGAACTGTAAAGCCGGTTGGGAAACTAACCTTGAGTTTCAATGAAAACTGATTCTCGGTTTTTCCAACTTGAATACCTGGTATTATAATGGTCAGCTAATAATTCAACTTGATAATGCTTGAATCAACAAGAGATCTCCTTCTAGTAGAAAAGATGTTGGAAAAGATAAAGGTAAAAATTTGGAAACCCTTACCCCTAACAATCTGATGAATCTGGAGAGAAACACGATTTTTCTGAAAGCAAAAAAGAATATGCAATTAGTGTTATGTACGGATGCATTTCTTCATTGCTTTTTTGGTGTAACATGGCTGATGCAACAGATTTCAGAGCCACAGATAGATTTTTTGAGCTCATTACACAACTTATATATTGATGTTGTTCTTGTAAATATTTTAAACACACCCCATGTGACTAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACC--------TT-GTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</genome_strand>
        <mrna_strand>GGAGCCTTATGACGACACACAATTGAGATGGAATGTAGCTGATCTTTTGACAAGAGTTGCTAGTAAATTTTCCGTCAATGGTAATCTTTCCGGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTACTTCCCTATCGGTCATAACAATATTACCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTCGGCACCAGCAACGGAAACTGAGAAAGCTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCCGTCACATTTCACTTTTGGAATGGCTTAACTTCGGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTTCTTCATCC-----------AT-AATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGCCTTTCTGGACCTTGTGTTTTTAGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548273" ref_strand="+" ref_description="SGN-E548273 [TUS-59-K24](-)">
      <seq>tagctgtgagagtaaaatactttttaagacaaaaaacagaatgtncagctaattcccatccaatcttatttgaaatctttgaactctcaaaggcggccttctatattttgggcttcattagaggtcatctttttcacatggtatttaagtggaccactggctcttttaaaaagtttttgagtccttggtccgttatctcattcagggagctttggcagaatctaaacatgtcatggtttctgtgatctgtcatcatcatatctgctggttaaagttacataatctgcttatctctttcttttgacagatacttctcggcaccagcaacggaaactgagaaagctaaacaagatacgctgttcaaaactatcctcaaagaagccgtcacatttcacttttggaatggcttaacttcggctatggttccagaggctggcagccttgcacaccggctcattaattacaattgcctacgttgctctgacacattgtgaaacaccattaaagcagatggatgaccttttaaagcatttttgttttcatgccattagatatacctcacagcttttaaagatattccggtggttcttcatccataatttttgttgtacaaaatatgaatctccagttggttgcctttctggaccttgtgtttttagtctatattagttgttgtagattccctcgagggacgaattaagaggtcctgctttttgtagctgagttcttactgtatatttccccttgtgagttttgtagaactatttgtagtcattggcaacaggacaatgatatatttaaatgatgttcttgtatgtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="50212" stop="51652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50512" g_stop="51352" g_length="841"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="817" r_length="817" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="819" polyA_stop="833"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E548273" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548273" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50512" e_stop="51352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACC--------TT-GTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</genome_strand>
        <mrna_strand>TAGCTGTGAGAGTAAAATA-CTTTTTAAGACAAAAAACAGAATGTNCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTC-AAAGGCGGCCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACT-G-----------G--CTCTTTTAAAAAGTTTTTGAGTCCTTGGTCCG--T---TATCTCATTCAGGGAGCTTTGGCAGAATCTAAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATCTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAACGGAAACTGAGAAAGCTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCCGTCACATTTCACTTTTGGAATGGCTTAACTTCGGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTTCTTCATCC-----------AT-AATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGCCTTTCTGGACCTTGTGTTTTTAGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="63886" stop="62841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63586" g_stop="63141" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63586" e_stop="63141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCAAATTTTTTATTCTAATACGAAATTAAATAACAATACACAAAAAAAAATAGTTTAAATTTTTTTTCTTTAAACTAAGGAATGAAAGAGAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAATTAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTT--TTAAAAA-TAGAAGCAACAAATATAAATTTGAAACAAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAACCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGTAAGGGCATATATGTGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGGGTATATCAGACCCTTTTCCCTACTTTT</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCTATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E541708" ref_strand="+" ref_description="SGN-E541708 [TUS-62-K7](-)">
      <seq>atccagtggtgcattgtgacttgaagccaagtgtcttgcttgatcaagacatggttggccatgtcagtgattttggcattgcaaaattgttaggtgcaggggagagttttgttcaaacaaggacaatagcaaccattggataattgctccagagtatggacaagatggaatcgtatccacaagctgcgatgtttatagtttcggtatcctgattgatggagacgtttacaagaatcagaccaggtgatgaaagatttactggagagttgagcatacgacgttgggttagtgattcttttccagatgagattcataaggtggtggatgctaatttggtacagcctaggggatgaacgaattgacgcaaagatgcagtgtctgttgtctattatagagttagctttgagctgtactttagcaacacctgatgcaagaattagtatggaagattctctttcaacacttcaaaatatcaggctccagtttgtcaatagtcgccaccgaaaaaagcaactgaaggatttagtaccgaaaaaagcaacttgcttggtaatggcaaggtctacaatgtacaattggagggtgcattcaaaagttttgatacagaagaatgtgaaatctgaccaaagtcatcaaagccttaatgttagaatacatgtctagtgggacacttgataaatggctgtactctcacaagttgttcttggatttacttcatattatgtactctttcactttcagtgccagctggaatggtgattttctagctactggagttcacaattctaatccataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="76829" stop="38340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76529" g_stop="76378" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76377" i_stop="76274" i_length="104">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76273" g_stop="75626" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="800" r_length="648" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75625" i_stop="74921" i_length="705">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.764" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74920" g_stop="74909" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="801" r_stop="812" r_length="12" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E541708" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76529" e_stop="76378"/>
          <exon e_start="76273" e_stop="75626"/>
          <exon e_start="74920" e_stop="74909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAGGTGTTGAAACTTTTACAGCTTCCTCGTGTTTTTAGAATACCCACAACATAATTCTTTTCCCCGATATAGGAAGCTTTTTTGATCATTTTAAACCATGATTGCAGAGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCTTTCACTTTCAGTGCCAGCTGGAATGGTGATTTTCTAGCTACTGGAGTTCACAATTCTAATCCATAATTAATTGTCTCCTCGATCTCTTCTAGAACAAGTTTTATGACATTTTGGCATGATATACTAGTTAAAACTATATATTTTAACCAAATCAACAATAAAAAAATGGTTGTAACTTTTCAAAGGGGTTGTGACCTTATGTGCATTCTGTTCACACTACCTTTTGTTGTCTATAAATATAAGAATTTCCCATCATTTTAATGCAACTAATTTTCTAGACTTCTTCTTCTACTATTAAATCTGGTACTAGTATTTTAAGTGTATTTTACTTTCACATTTTCTTCCTGTCTACACTTGTTGAATTTTTGGGCTCTTAAAGAATTATCTTGACAATTATTCATTGGGTAGTGGGTGGGATGCAAGTGACAGAAACTAGAAAATAGAAAATACTGTGACACTACAACAAATAAAAGATTTAACAATAATAATATAAATTAACAGTTATGTTATATTTAGCTATGATAATAAATATGATATGTATAACCAACACTCTGGGTGCACTATATTTAACACTCTGAATGCAATGACACTAACTCAATTTTCCATTAAAAGGACAATCTATTGCCTTTAGATATATCTTTTATTGTATGAGCGTTGACCGAGTCTCACAAAGTCAACTTGTAGTACTAAAAGTTAACACACTTAAGTCTTAATCATTGAACTCTCTAGACACTAACTAGTGTACATTGAGTTGCCACACCAATTCTTGTTTTAGGAAAAGGAGAAA</genome_strand>
        <mrna_strand>ATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAG........................................................................................................AGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCTTTCACTTTCAGTGCCAGCTGGAATGGTGATTTTCTAGCTACTGGAGTTCACAATTCTAATCCATAAAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734152" ref_strand="+" ref_description="SGN-E734152 [LB11DF11]">
      <seq>catttacatacatagtcaagtttcaaccagcttttgggaattctggaagtcacgtgctcatcaaagtaaattttatatacactgatgcaacggtctatctccacaatgggtgttcaaatccagtggtgcattgtgacttgaagccaagtgtcttgcttgatcaagacatggttggccatgtcagtgattttggcattgcaaaattgttaggtgcaggggagagttttgttcaaacaaggacaatagcaaccattggataattgctccagagtatggacaagatggaatcgtatccacaagctgcgatgtttatagtttcggtatcctgattgatggagacgtttacaagaatcagaccaggtgatgaaagatttactggagagttgagcatacgacgttgggttagtgattcttttccagatgagattcataaggtggtggatgctaatttggtacagcctaggggatgaacgaattgacgcaaagatgcagtgtctgttgtctattatagagttagctttgagctgtactttagcaacacctgatgcaagaattagtatggaagattctctttcaacacttcaaaatatcaggctccagtttgtcaatagtcgccaccgaaaaaagcaactgaaggatttagtaccgaaaaaagcaacttgcttggtaatggcaaggtctacaatgtacaattggagggtgcattcaaaagttttgatacagaagaatgtgaaatctgaccaaagtcatcaaagccttaatgttagaatacatgtctagtgggacacttgataaatggctgtactctcacaagttgttcttggatttacttcatattatgtactccttcactttcagtgccagctggaatggtgattttctaactactggaagttcacaattctaatcaataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="76942" stop="75326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76647" g_stop="76378" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76377" i_stop="76274" i_length="104">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76273" g_stop="75631" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="913" r_length="644" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="914" polyA_stop="926"/>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E734152" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>913</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76647" e_stop="76378"/>
          <exon e_start="76273" e_stop="75631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCATACATACATAGTCAAGTTTCAACCAGCTTTTGGGAATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAGGTGTTGAAACTTTTACAGCTTCCTCGTGTTTTTAGAATACCCACAACATAATTCTTTTCCCCGATATAGGAAGCTTTTTTGATCATTTTAAACCATGATTGCAGAGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCTTTCACTTTCAGTGCCAGCTGGAATGGTGATTTTCTAGCTACTGG-AGTTCACAATTCTAATCCATA</genome_strand>
        <mrna_strand>CAT-TTACATACATAGTCAAGTTTCAACCAGCTTTTGGGAATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAG........................................................................................................AGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCCTTCACTTTCAGTGCCAGCTGGAATGGTGATTTTCTAACTACTGGAAGTTCACAATTCTAATCAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E205032" ref_strand="+" ref_description="SGN-E205032 [cLEC-16-L7]">
      <seq>ggattaaaattggggactccaccaactagaaaatcaccattccaactggcactgaaagtgaaagagtacataatatgaagtaaatccaagaacaacttttgagagtacagccatttatcaagtgtcccactagacatgtattctaacattaaggcttttatgactttggccagatttcacattcttctgtatcaaaacttttaaatgcaccctccaattgtacattgtagaccttgccattaccaagcaagttgctttcttcggcactaaatccttcaattgcttttttcggtggcgactattgacaaactggagcctgatattttgaagtgttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="+" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="75334" stop="76270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75634" g_stop="75970" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="+" ref_id="SGN-E205032" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75634" e_stop="75970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTAGAATTGTGAACTCCAGTAGCTAGAAAATCACCATTCCAGCTGGCACTGAAAGTGAAAGAGTACATAATATGAAGTAAATCCAAGAACAACTTGTGAGAGTACAGCCATTTATCAAGTGTCCCACTAGACATGTATTCTAACATTAAGGCTTTGATGACTTTGGTCAGATTTCACATTCTTCTGTATCAAAACTTTTGAATGCACCCTCCAATTGTACATTGTAGACCTTGCCATTACCAAGCAAGTTGCTTTTTTCGGTACTAAATCCTTCAGTTGCTTTTTTCGGTGGCGACTATTGACAAACTGGAGCCTGATATTTTGAAGTGTTGAA</genome_strand>
        <mrna_strand>GGATTAAAATTGGGGACTCCACCAACTAGAAAATCACCATTCCAACTGGCACTGAAAGTGAAAGAGTACATAATATGAAGTAAATCCAAGAACAACTTTTGAGAGTACAGCCATTTATCAAGTGTCCCACTAGACATGTATTCTAACATTAAGGCTTTTATGACTTTGGCCAGATTTCACATTCTTCTGTATCAAAACTTTTAAATGCACCCTCCAATTGTACATTGTAGACCTTGCCATTACCAAGCAAGTTGCTTTCTTCGGCACTAAATCCTTCAATTGCTTTTTTCGGTGGCGACTATTGACAAACTGGAGCCTGATATTTTGAAGTGTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E550567" ref_strand="+" ref_description="SGN-E550567 [TUS-6-D7](-)">
      <seq>cattgcaaaattgttaggtgcaggggagagttttgttcaaacaaggacaatagcaaccattggataattgctccagagtatggacaagatggaatcgtatccacaagctgcgatgtttatagtttcggtatcctgattgatggagacgtttacaagaatcagaccaggtgatgaaagatttactggagagttgagcatacgacgttgggttagtgattcttttccagatgagattcataaggtggtggatgctaatttggtacagcctaggggatgaacgaattgacgcaaagatgcagtgtctgttgtctattatagagttagctttgagctgtactttagcaacacctgatgcaagaattagtatggaagattctctttcaacacttcaaaatatcaggctccagtttgtcaatagtcgccaccgaaaaaagcaactgaaggatttagtaccgaaaaaagcaacttgcttggtaatggcaaggtctacaatgtacaattggagggtgcattcaaaagttttgatacagaagaatgtgaaatctgaccaaagtcatcaaagccttaatgttagaatacatgtctagtgggacacttgataaatggctgtactctcacaagttgttcttggatttacttcatattatgtactctttcacgtacagtgccagctggaatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="87608" stop="75369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76453" g_stop="76378" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76377" i_stop="76274" i_length="104">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76273" g_stop="75669" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="681" r_length="605" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E550567" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76453" e_stop="76378"/>
          <exon e_start="76273" e_stop="75669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAGGTGTTGAAACTTTTACAGCTTCCTCGTGTTTTTAGAATACCCACAACATAATTCTTTTCCCCGATATAGGAAGCTTTTTTGATCATTTTAAACCATGATTGCAGAGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCTTTCACTTTCAGTGCCAGCTGGAATGGT</genome_strand>
        <mrna_strand>CATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAG........................................................................................................AGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCTTTCACGTACAGTGCCAGCTGGAATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E314138" ref_strand="+" ref_description="SGN-E314138 [cTOA-21-M13]">
      <seq>aattctggaagtcacgtgctcatcaaagtaaattttatatacactgatgcaacggtctatctccacaatgggtgttcaaatccagtggtgcattgtgacttgaagccaagtgtcttgcttgatcaagacatggttggccatgtcagtgattttggcattgcaaaattgttaggtgcaggggagagttttgttcaaacaaggacaatagcaaccattggataattgctccagagtatggacaagatggaatcgtatccacaagctgcgatgtttatagtttcggtatcctgattgatggagacgtttacaagaatcagaccaggtgatgaaagatttactggagagttgagcatacgacgttgggttagtgattcttttccagatgagattcataaggtggtggatgctaatttggtacagcctangggatgaacgaattgacgcaaagatgcagtgtctgttgtctattatagagttagctttgagctgtactttagcaacacctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="76908" stop="75696"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76608" g_stop="76378" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76377" i_stop="76274" i_length="104">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76273" g_stop="75997" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="508" r_length="277" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E314138" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76608" e_stop="76378"/>
          <exon e_start="76273" e_stop="75997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAGGTGTTGAAACTTTTACAGCTTCCTCGTGTTTTTAGAATACCCACAACATAATTCTTTTCCCCGATATAGGAAGCTTTTTTGATCATTTTAAACCATGATTGCAGAGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGAT</genome_strand>
        <mrna_strand>AATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAG........................................................................................................AGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTANGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395576" ref_strand="-" ref_description="SGN-E395576 [TUS-16-D20](-)">
      <seq>tttcatggctgaatttctctcttgtgcccacaacgccatcagaatgcagacaataatggcgaagatgaaggtggtgaggagtgaaattgctgcgaaacaagtggttgtgatcgaggaaaatgaggagatacattggtatgcttcttgaatttcgtccggaggacacagctactcaaatccaaatgcaaaggatcttcaagagtaaaggaataaaacaagaccttggttcattgtgaaagttatgtgtgatccatagctgaaagtttggcatttatctcggttttcccttcctatttgattttttttcaataatcgccgttaggtcaattctgctatttaagtcaagtttcaaccagcttttgggaattctggaagtcacgtgctcatcaaagtaaattttatatacactgatgcaacggtctatctccacaatgggtgttcaaatccagtggtgcattgtgacttgaagccaagtgtcttgcttgatcaagacatggttggccatgtcagtgattttggcattgcaaaattgttaggtgcaggggagagttttgttcaaacaaggacaatagcaaccattggataattgctccagagtatggacaagatggaatcgtatccacaagctgcgatgtttatagtttcggtatcctgattgatggaaacttttaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="80693" stop="75896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80393" g_stop="80347" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80346" i_stop="80248" i_length="99">
            <donor d_prob="0.353" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80247" g_stop="80126" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="168" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80125" i_stop="78420" i_length="1706">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78419" g_stop="78349" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="239" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78348" i_stop="76847" i_length="1502">
            <donor d_prob="0.905" d_score="1.00"/>
            <acceptor a_prob="0.758" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76846" g_stop="76744" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="341" r_length="102" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76743" i_stop="76632" i_length="112">
            <donor d_prob="0.598" d_score="1.00"/>
            <acceptor a_prob="0.027" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="76631" g_stop="76378" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="595" r_length="254" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="76377" i_stop="76274" i_length="104">
            <donor d_prob="0.773" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="76273" g_stop="76196" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="673" r_length="78" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E395576" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395576" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="80393" e_stop="80347"/>
          <exon e_start="80247" e_stop="80126"/>
          <exon e_start="78419" e_stop="78349"/>
          <exon e_start="76846" e_stop="76744"/>
          <exon e_start="76631" e_stop="76378"/>
          <exon e_start="76273" e_stop="76196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCATGGCTGAATTTCTCTCTTGTGCACCACAACGCCATCAGAATGGTGATGTTCCCAATTCCCCTCTCAATGAATTTCCCAATTCCCCATTCAATTTTACTTCTTTTTGGATAAAAAATAATAAGTGTTTGTGTGTGTATGCAGCAGACAATAATGGCGAAGATGAAGGTGGTGAGGAGTGAAATTGCTGCGAAACAAGTGGTTGTGATCGAGGAAAATGAGGAGATACATTGGTATGCTTCTTGAATTTCGTCCGGAGGACACAGGTACTTTTTCCTCTGACTTAGGGTTTGGGGGTTTAGTTCATTGATGGGTTCTTTGCATAATTTACATGAAATCAACTGGTAAGAATTGGGAATTAGCTGTATCAGTTTATGGATCATATAACTTGCAATTGCTAGAGGGTGTTTACCACCGATATGGCTGATAGAAAAGTTTGTTGTGAAGATAATTTTCTATCTTGATCTCTTAATTAGGGAGTGAAATTTTTGTAGGGAATCAAAAACTTGAACAGTAGCTGCAAGTATAGGTTACGGTTGACAGTGATTAAAAAAGAATTTCGGACAAGTGATTAATGTAAGCTTAGATAAGAAGATATGAAGCCAAGAATCATAATAGAGAGTTAGTAGATATTCTCACATATAAAAGGCAATTTTATTCTTCAATCTGTTTGTTACATTATCTGATTTTTATGTCATAATGGTTTCTTGAAACCCTGCTTTGAAGACCTCCAAAACAATCCATGTGTAGTAGAATAAGGTTTGTGTTTCCCACATCCTAATTGTGAAGTTACGTATGTTATTGTTGTAACATAAGAGATGAAGTGCCACAGTCAAACCTTAATTTCTAGCATGGTTTGGCTAGAATGTATTGATTGATTGAATGAGTGATATATAAGCAGACACACAACTAAAAGGTCTTCCAAAAACTTGTTTCGGAATATGAACAGCCAAATACAAGATGTCCGAACAAAAGAAGAGCAGTGAAAGTAGATATTCTGCCATCAGTAAGTACGATTTCATTCCGAATACAGTAGTTACAAAATCCAGCAGCCTCAAGCAGCTCAAATTATGTCGCTACAAGCAGAACTTCTTTTGGGAGTAATTTCCAGTAAAAACAGAAATTCCTAAATAACCTAAATCAATCTAGACATGCATCTGTACAACATATTTAGACAACTATGGTTTGGCTAGATTTTCAGGTAAAGTTGATATTTTGGGGTTTGTTTAGGTCTCTTTTGCTCTTTAGTGTATGCAAACAAGAATTAAAAAAAGAAATCTGGCCTTGCATGTTGAGTCAATCATTTAGCTTGAAATAGAGAATTTTGTTTTACTTCAAGATTGCAGTTTCTCACTGCCACAGCAAGGGTGTTTACCACCGAGATCGCTGAATGGAAAATCTCTTGTATCTTAATGTTTTAACTATTGTTCCTTGTTCCCCAGTCTGAAAATTTGTGCATATAACCTCTGACTTAGGGTTGTGGGGGCCTTGTTGATTGATCAATTTGATTGAATAAATTGTGAACTCTCTCTTGTTATTACTATTTGGAATTTTGCTTTACTTCAAAATTTCCTCCCCAAAAAAATTTCAACAACTCATTGATGCAATTGCTGATTGGCCTGCAATCCACCCAAAACCTTTTTATCATTATACTTTAGATTGCTATCTGAGAGTACTACTTTTCCCATTCTTGATGTCCACATTAATAGCATCAGATTTTTTTAATCTGCAAAGCTTGAATCTGAAAGAGGCATAGGGGTGGTTAGCTCTGTTTTAATTCATTGATCCCTTACCTAACACAATCAGCAAAGATTTTTGATGATTTTTTTGAGTTTGATTGCTCAACATAGATTACAATCCTTCCAATTTCCCAGATCATTTTAAATGTGTGAAATTTCTTAGGGAAGTCTTATGCTCGTTCCTTGATTTGTGTACCTTTTCTAATCTTCTTTTTCTTAATTAATTTGTGAAGCTACTCAAATCCAAATGCAAAGGATCTTCAAGAGTAAAGGAATAAAACAAGACCTTGGTTCATTGTGAAAGGTTTGACTGCCCAACTCAGTTTTTGTTCTGGTCTTCTTTTTGTTACGAATCTGTCGTGATCATTAACAATTTCGGCCTCGGGCAGGGCAGGCAAGAAATCGAGGCAGGTGGCGAGAAGTAGGCGTGGTGGGGGACGGGCGACGGGAATGGGGGTAGGGGGAATGGGAGTGGGCGGGACGTAGGGTCAGGGCGGGGCGAGGACAGGGTTGGGGTCGGGGTCTAGAGGCACCATGCATGCCTTAGGGTCGGGGGGTTGGGCCGAGGAACTGTATGTGCCTCAGGGTTGGGGGCCAGGGGGCGGCACCGAGGAACACGCGTGCCTCATGGTCATGGGTAGGGCGAACCCGAGGCTGTCTTGGGGTCAAGGTGTGGGCGGGGGAGGACCCGAGGAACACGCGTGCCTCGACGGTAGGGGGCGGCCCCGAGGCATGCAAGTGCCTCAGGGTACAAAGAGGCAAAGGCCTGCCTTCGGGTCGTGGGGGGCGGCCCCGGGGCACGCGCGTGCCTCGGGGTCGTTGGAGGGCGGGGGGCGGCCCTAGGGCACGCTCTTGCCTCGGGGTCGAGGTGGGCGGGGGCGGCCTCGGGGCACGCGCTTGCCTTAGGGTCGAGGGGGGCGGGGGGCCTCGGGGCACGTGTCTAGAAGAACTAGTGTATTAATAAGAGTAAGTTTTTCATTTGGCTTTTTGTGTGATTAAAACGCATGGTAGATTTTGTAATTATGTATTATTTTGCATTGTTATGAAAAGAAAAATTCTTTATTTTCGTGTTAAACTTTCAAGTGTTATTTAACTGACAAAATTTCTATTTATACATGATGAGTTTGATAATATTTGAATGTTTTATGCATAATAGTGATGTTAGGGGAAATATATATATTCGTGATATTCACGTGCTTTGTCGAGAACTAGTGCATCATTAATAAGAGTAAGTTTTTCTCGTGAAGCATTTGGCTTTTTGGTTGATTAAAACGCATGGTAGATTTTGTATAACTTTCCATATAAACTTCCTGAAAGCTTTCAAATGCTCCTTTTTTATGTATGAATTTATTTCTAAAAAATGGCTCTGTCCCTGTTGAATCAAGGAGGTTAACATCGAAGCTTAGATATAAGAAAGAACTGTTGTCTGCCTGCCTGCATATTGGTATTTTCTTTTCTTTGTTTTGAATTCATGTCCATTTTCAGTCTCTTCTGAGTATTAAGTAAGTTGGCATCTCTGTTTTATGTATGCTGAGATTGTCCAATGAACCAAATGATTGGGGATATATAGCTATGTATCATCTTCTATATCACTAAGTTAAGGGATGTATCTTCTTTATCACTAAGTTAAGGGTAAGACTCAGTTTTCTTTCTTTAATCGCTATTGATATGTCAATTTCTTTGTGCTAACAATTTCGAGCTCGCCGTGAAATACGGGTGTCCTGTTTGAGTAGTATAAACAGTATGGGTGTCCAGCTGCTGGAATGTGCTATCACTCACCTTCATCTATTTTGTTTGTTTTCTCAGTTTATGTGTGATCCATAGCTGAAAGTTTGGCATTTATCTCGGTTTTCCCTTCCTATTTGATTTTTTTTCAATAATCGCCGTTAGGTCAATTCTGCTATTTAAGGTAAAATCTGATTGATAGATTACGACTTGGAGAAATTTAAAAATCTGACAGTAGTGTCAAAGTAAGAAGTTTTTAACTGACAGAATATTTGAATGGTATCATACATACATAGTCAAGTTTCAACCAGCTTTTGGGAATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAGGTGTTGAAACTTTTACAGCTTCCTCGTGTTTTTAGAATACCCACAACATAATTCTTTTCCCCGATATAGGAAGCTTTTTTGATCATTTTAAACCATGATTGCAGAGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACA</genome_strand>
        <mrna_strand>TTTCATGGCTGAATTTCTCTCTTGTGC-CCACAACGCCATCAGAATG...................................................................................................CAGACAATAATGGCGAAGATGAAGGTGGTGAGGAGTGAAATTGCTGCGAAACAAGTGGTTGTGATCGAGGAAAATGAGGAGATACATTGGTATGCTTCTTGAATTTCGTCCGGAGGACACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTCAAATCCAAATGCAAAGGATCTTCAAGAGTAAAGGAATAAAACAAGACCTTGGTTCATTGTGAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-TTATGTGTGATCCATAGCTGAAAGTTTGGCATTTATCTCGGTTTTCCCTTCCTATTTGATTTTTTTTCAATAATCGCCGTTAGGTCAATTCTGCTATTTAAG................................................................................................................TCAAGTTTCAACCAGCTTTTGGGAATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAG........................................................................................................AGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAAACTTTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548594" ref_strand="+" ref_description="SGN-E548594 [TUS-62-K7]">
      <seq>agtttttcatttggctttttgtgtgattaaaacgcatggtagattttgtaattatgtattattttgcattgttatgaaaagaaaaattctttattttcgtgttaaactttcaagtgttatttaactgacaaaatttctatttatacatgatgagtttgataatatttgaatgttttatgcataatagtgatgttaggggaaatatatatattcgtgatattcacgtgctttgtcgagaactagtgcatcattaataagagtaagtttttctcgtgaagcatttggctttttggttgattaaaacgcatggtagattttgtataactttccatataaacttcctgaaagctttcaaatgctccttttttatgtatgaatttatttctaaaaaatggctctgtccctgttgaatcaaggaggttaacatcgaagcttagatataagaaagaactgttgtctgcctgcctgcatattggtattttcttttctttgttttgaattcatgtccattttcagtctcttctgagtattaagtaagttggcatctctgttttatgtatgctgagattgtccaatgaaccaaatgattggggatatatagctatgtatcatcttctatatcactaagttaagggatgtatcttctttatcactaagttaanggtaagactcagttttctttctttaatcgctattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="77983" stop="76687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77683" g_stop="76987" g_length="697"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="697" r_length="697" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E548594" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77683" e_stop="76987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTTTCATTTGGCTTTTTGTGTGATTAAAACGCATGGTAGATTTTGTAATTATGTATTATTTTGCATTGTTATGAAAAGAAAAATTCTTTATTTTCGTGTTAAACTTTCAAGTGTTATTTAACTGACAAAATTTCTATTTATACATGATGAGTTTGATAATATTTGAATGTTTTATGCATAATAGTGATGTTAGGGGAAATATATATATTCGTGATATTCACGTGCTTTGTCGAGAACTAGTGCATCATTAATAAGAGTAAGTTTTTCTCGTGAAGCATTTGGCTTTTTGGTTGATTAAAACGCATGGTAGATTTTGTATAACTTTCCATATAAACTTCCTGAAAGCTTTCAAATGCTCCTTTTTTATGTATGAATTTATTTCTAAAAAATGGCTCTGTCCCTGTTGAATCAAGGAGGTTAACATCGAAGCTTAGATATAAGAAAGAACTGTTGTCTGCCTGCCTGCATATTGGTATTTTCTTTTCTTTGTTTTGAATTCATGTCCATTTTCAGTCTCTTCTGAGTATTAAGTAAGTTGGCATCTCTGTTTTATGTATGCTGAGATTGTCCAATGAACCAAATGATTGGGGATATATAGCTATGTATCATCTTCTATATCACTAAGTTAAGGGATGTATCTTCTTTATCACTAAGTTAAGGGTAAGACTCAGTTTTCTTTCTTTAATCGCTATTG</genome_strand>
        <mrna_strand>AGTTTTTCATTTGGCTTTTTGTGTGATTAAAACGCATGGTAGATTTTGTAATTATGTATTATTTTGCATTGTTATGAAAAGAAAAATTCTTTATTTTCGTGTTAAACTTTCAAGTGTTATTTAACTGACAAAATTTCTATTTATACATGATGAGTTTGATAATATTTGAATGTTTTATGCATAATAGTGATGTTAGGGGAAATATATATATTCGTGATATTCACGTGCTTTGTCGAGAACTAGTGCATCATTAATAAGAGTAAGTTTTTCTCGTGAAGCATTTGGCTTTTTGGTTGATTAAAACGCATGGTAGATTTTGTATAACTTTCCATATAAACTTCCTGAAAGCTTTCAAATGCTCCTTTTTTATGTATGAATTTATTTCTAAAAAATGGCTCTGTCCCTGTTGAATCAAGGAGGTTAACATCGAAGCTTAGATATAAGAAAGAACTGTTGTCTGCCTGCCTGCATATTGGTATTTTCTTTTCTTTGTTTTGAATTCATGTCCATTTTCAGTCTCTTCTGAGTATTAAGTAAGTTGGCATCTCTGTTTTATGTATGCTGAGATTGTCCAATGAACCAAATGATTGGGGATATATAGCTATGTATCATCTTCTATATCACTAAGTTAAGGGATGTATCTTCTTTATCACTAAGTTAANGGTAAGACTCAGTTTTCTTTCTTTAATCGCTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E299724" ref_strand="+" ref_description="SGN-E299724 [cLEW-1-B6]">
      <seq>gtttttcatttggctttttgtgtgattaaaacgcatggtagattttgtaattatgtattattttgcattgttatgaaaagaaaaattctttattttcgtgttaaactttcaagtgttatttaactgacaaaatttctatttatacatgatgagtttgataatatttgaatgttttatgcataatagtgatgttaggggaaatatatatattcgtgatattcacgtgctttgtcgagaactagtgcatcattaataagagtaagtttttctcgtgaagcatttggctttttggttgattaaaacgcatggtagattttgtataactttccatataaacttcctgaaagctttcaaatgctccttttttatgtatgaatttatttctaaaaaatggctctgtccctgttgaatcaaggaggttaacatcgaagcttagatataagaaagaactgttgtctgcctgcctgcatattggtattttcttttctttgttttgaattcatgtccattttcagtctcttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="77982" stop="76859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77682" g_stop="77159" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E299724" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77682" e_stop="77159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCATTTGGCTTTTTGTGTGATTAAAACGCATGGTAGATTTTGTAATTATGTATTATTTTGCATTGTTATGAAAAGAAAAATTCTTTATTTTCGTGTTAAACTTTCAAGTGTTATTTAACTGACAAAATTTCTATTTATACATGATGAGTTTGATAATATTTGAATGTTTTATGCATAATAGTGATGTTAGGGGAAATATATATATTCGTGATATTCACGTGCTTTGTCGAGAACTAGTGCATCATTAATAAGAGTAAGTTTTTCTCGTGAAGCATTTGGCTTTTTGGTTGATTAAAACGCATGGTAGATTTTGTATAACTTTCCATATAAACTTCCTGAAAGCTTTCAAATGCTCCTTTTTTATGTATGAATTTATTTCTAAAAAATGGCTCTGTCCCTGTTGAATCAAGGAGGTTAACATCGAAGCTTAGATATAAGAAAGAACTGTTGTCTGCCTGCCTGCATATTGGTATTTTCTTTTCTTTGTTTTGAATTCATGTCCATTTTCAGTCTCTTCTG</genome_strand>
        <mrna_strand>GTTTTTCATTTGGCTTTTTGTGTGATTAAAACGCATGGTAGATTTTGTAATTATGTATTATTTTGCATTGTTATGAAAAGAAAAATTCTTTATTTTCGTGTTAAACTTTCAAGTGTTATTTAACTGACAAAATTTCTATTTATACATGATGAGTTTGATAATATTTGAATGTTTTATGCATAATAGTGATGTTAGGGGAAATATATATATTCGTGATATTCACGTGCTTTGTCGAGAACTAGTGCATCATTAATAAGAGTAAGTTTTTCTCGTGAAGCATTTGGCTTTTTGGTTGATTAAAACGCATGGTAGATTTTGTATAACTTTCCATATAAACTTCCTGAAAGCTTTCAAATGCTCCTTTTTTATGTATGAATTTATTTCTAAAAAATGGCTCTGTCCCTGTTGAATCAAGGAGGTTAACATCGAAGCTTAGATATAAGAAAGAACTGTTGTCTGCCTGCCTGCATATTGGTATTTTCTTTTCTTTGTTTTGAATTCATGTCCATTTTCAGTCTCTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243333" ref_strand="+" ref_description="SGN-E243333 [cLEF-16-E23]">
      <seq>caattcccctttcaatgaatttcccaaatccccattcaattttacttctttttggataaaaaatgataagtgtttgtgtgtgtttgcagcccacaataatggcgaacatgaaggtggtgacgagtgaaattgctgcgaaacatgtggttgagatctaggaaaatgaagagatacattggtatgcttcttgaatttcgtccggaggacaccgctactcaaatccaaatgcaaaggatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="80636" stop="78093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80336" g_stop="80126" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80125" i_stop="78420" i_length="1706">
            <donor d_prob="0.854" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78419" g_stop="78393" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="238" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E243333" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243333" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80336" e_stop="80126"/>
          <exon e_start="78419" e_stop="78393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCCCCTCTCAATGAATTTCCCAATTCCCCATTCAATTTTACTTCTTTTTGGATAAAAAATAATAAGTGTTTGTGTGTGTATGCAGCAGACAATAATGGCGAAGATGAAGGTGGTGAGGAGTGAAATTGCTGCGAAACAAGTGGTTGTGATCGAGGAAAATGAGGAGATACATTGGTATGCTTCTTGAATTTCGTCCGGAGGACACAGGTACTTTTTCCTCTGACTTAGGGTTTGGGGGTTTAGTTCATTGATGGGTTCTTTGCATAATTTACATGAAATCAACTGGTAAGAATTGGGAATTAGCTGTATCAGTTTATGGATCATATAACTTGCAATTGCTAGAGGGTGTTTACCACCGATATGGCTGATAGAAAAGTTTGTTGTGAAGATAATTTTCTATCTTGATCTCTTAATTAGGGAGTGAAATTTTTGTAGGGAATCAAAAACTTGAACAGTAGCTGCAAGTATAGGTTACGGTTGACAGTGATTAAAAAAGAATTTCGGACAAGTGATTAATGTAAGCTTAGATAAGAAGATATGAAGCCAAGAATCATAATAGAGAGTTAGTAGATATTCTCACATATAAAAGGCAATTTTATTCTTCAATCTGTTTGTTACATTATCTGATTTTTATGTCATAATGGTTTCTTGAAACCCTGCTTTGAAGACCTCCAAAACAATCCATGTGTAGTAGAATAAGGTTTGTGTTTCCCACATCCTAATTGTGAAGTTACGTATGTTATTGTTGTAACATAAGAGATGAAGTGCCACAGTCAAACCTTAATTTCTAGCATGGTTTGGCTAGAATGTATTGATTGATTGAATGAGTGATATATAAGCAGACACACAACTAAAAGGTCTTCCAAAAACTTGTTTCGGAATATGAACAGCCAAATACAAGATGTCCGAACAAAAGAAGAGCAGTGAAAGTAGATATTCTGCCATCAGTAAGTACGATTTCATTCCGAATACAGTAGTTACAAAATCCAGCAGCCTCAAGCAGCTCAAATTATGTCGCTACAAGCAGAACTTCTTTTGGGAGTAATTTCCAGTAAAAACAGAAATTCCTAAATAACCTAAATCAATCTAGACATGCATCTGTACAACATATTTAGACAACTATGGTTTGGCTAGATTTTCAGGTAAAGTTGATATTTTGGGGTTTGTTTAGGTCTCTTTTGCTCTTTAGTGTATGCAAACAAGAATTAAAAAAAGAAATCTGGCCTTGCATGTTGAGTCAATCATTTAGCTTGAAATAGAGAATTTTGTTTTACTTCAAGATTGCAGTTTCTCACTGCCACAGCAAGGGTGTTTACCACCGAGATCGCTGAATGGAAAATCTCTTGTATCTTAATGTTTTAACTATTGTTCCTTGTTCCCCAGTCTGAAAATTTGTGCATATAACCTCTGACTTAGGGTTGTGGGGGCCTTGTTGATTGATCAATTTGATTGAATAAATTGTGAACTCTCTCTTGTTATTACTATTTGGAATTTTGCTTTACTTCAAAATTTCCTCCCCAAAAAAATTTCAACAACTCATTGATGCAATTGCTGATTGGCCTGCAATCCACCCAAAACCTTTTTATCATTATACTTTAGATTGCTATCTGAGAGTACTACTTTTCCCATTCTTGATGTCCACATTAATAGCATCAGATTTTTTTAATCTGCAAAGCTTGAATCTGAAAGAGGCATAGGGGTGGTTAGCTCTGTTTTAATTCATTGATCCCTTACCTAACACAATCAGCAAAGATTTTTGATGATTTTTTTGAGTTTGATTGCTCAACATAGATTACAATCCTTCCAATTTCCCAGATCATTTTAAATGTGTGAAATTTCTTAGGGAAGTCTTATGCTCGTTCCTTGATTTGTGTACCTTTTCTAATCTTCTTTTTCTTAATTAATTTGTGAAGCTACTCAAATCCAAATGCAAAGGATCT</genome_strand>
        <mrna_strand>CAATTCCCCTTTCAATGAATTTCCCAAATCCCCATTCAATTTTACTTCTTTTTGGATAAAAAATGATAAGTGTTTGTGTGTGTTTGCAGCCCACAATAATGGCGAACATGAAGGTGGTGACGAGTGAAATTGCTGCGAAACATGTGGTTGAGATCTAGGAAAATGAAGAGATACATTGGTATGCTTCTTGAATTTCGTCCGGAGGACACCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTCAAATCCAAATGCAAAGGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E724466" ref_strand="+" ref_description="SGN-E724466 [FC24AG09]">
      <seq>aatcggccgaattgaattccctctatacaaaatctccttataaaaaagagcaccccctttatctctatactgacaaaaaaccaagagaaatggacaataagtttcatttttttcattatctccatttcttcttgcttctatcttcatcttgcttttcacttgttgccttctcttggattccatataatgaaaacaagaactatgaaggctcctctgatcttgttaatcttgaataccatatgggacctgttctttcttctcctattaaactttatgtgatatggtatggccattggaacccttctcatcaagccacaattagagactttcttaactccttttcatcttcttatgcacctcatccttctgtagctgattggtggcgaaccgttcgtctttacacagatcaaactggccaaaacatctcaactatttcactttctggtgaattctttgactataagtactcacaagggaagtaccttagcagattatcaatgcaatatgtgatcaagaatgcagtaagatcataccgtgaatctataccgttaaattataagaatggagtttacttagtgttaacatcttatgatgttcaagttcaagaattttgtagggctgtatgtggtttccattactttacatttccatcaattcttggagtgacagtcccttatgcttggattggttatagtgggaaacaatgtcctggtttctgtgcttatccttttgcttggcctaagaattcagggaagccaccaccaaacacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="107444" stop="106088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107161" g_stop="106388" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="771" r_length="771" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E724466" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E724466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107161" e_stop="106388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCAACCTATCTTCTAATTCCCTCTATATAAAATCTCCTTATAAAAAAGAGCACCCCCTTTATCTCTATACTGACAAAAAACCAAGAGAAATGGACAATAAGTTTCATTTTTTTCATTATCTCCATTTCTTCTTGCTTCTATCTTCATCTTGCTTTTCACTTGTTGCCTTCTCTTGGATTCCATATAATGAAAACAAGAACTATGAAGGCTCCTCTGATCTTGTTAATCTTGAATACCATATGGGACCTGTTCTTTCTTCTCCTATTAAACTTTATGTGATATGGTATGGCCATTGGAACCCTTCTCATCAAGCCACAATTAGAGACTTTCTTAACTCCTTTTCATCTTCTTATGCACCTCATCCTTCTGTAGCTGATTGGTGGCGAACCGTTCGTCTTTACACAGATCAAACTGGCCAAAACATCTCAACTATTTCACTTTCTGGTGAATTCTTTGACTATAAGTACTCACAAGGGAAGTACCTTAGCAGATTATCAATGCAATATGTGATCAAGAATGCAGTAAGATCATACCGTGAATCTATACCGTTAAATTATAAGAATGGAGTTTACTTAGTGTTAACATCTTATGATGTTCAAGTTCAAGAATTTTGTAGGGCTGTATGTGGTTTCCATTACTTTACATTTCCATCAATTCTTGGAGTGACAGTCCCTTATGCTTGGATTGGTTATAGTGGGAAACAATGTCCTGGTTTCTGTGCTTATCCTTTTGCTTGGCCTAAGAATTCAGGGAAGCCACCACCAAACACAA</genome_strand>
        <mrna_strand>AATC-GGCCGA-ATT-GAATTCCCTCTATACAAAATCTCCTTATAAAAAAGAGCACCCCCTTTATCTCTATACTGACAAAAAACCAAGAGAAATGGACAATAAGTTTCATTTTTTTCATTATCTCCATTTCTTCTTGCTTCTATCTTCATCTTGCTTTTCACTTGTTGCCTTCTCTTGGATTCCATATAATGAAAACAAGAACTATGAAGGCTCCTCTGATCTTGTTAATCTTGAATACCATATGGGACCTGTTCTTTCTTCTCCTATTAAACTTTATGTGATATGGTATGGCCATTGGAACCCTTCTCATCAAGCCACAATTAGAGACTTTCTTAACTCCTTTTCATCTTCTTATGCACCTCATCCTTCTGTAGCTGATTGGTGGCGAACCGTTCGTCTTTACACAGATCAAACTGGCCAAAACATCTCAACTATTTCACTTTCTGGTGAATTCTTTGACTATAAGTACTCACAAGGGAAGTACCTTAGCAGATTATCAATGCAATATGTGATCAAGAATGCAGTAAGATCATACCGTGAATCTATACCGTTAAATTATAAGAATGGAGTTTACTTAGTGTTAACATCTTATGATGTTCAAGTTCAAGAATTTTGTAGGGCTGTATGTGGTTTCCATTACTTTACATTTCCATCAATTCTTGGAGTGACAGTCCCTTATGCTTGGATTGGTTATAGTGGGAAACAATGTCCTGGTTTCTGTGCTTATCCTTTTGCTTGGCCTAAGAATTCAGGGAAGCCACCACCAAACACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E697589" ref_strand="+" ref_description="SGN-E697589 [FA03CA07]">
      <seq>cggtacaataagtttcatttttttcattatctccatttcttcttgcttctatcttcatcttgcttttcacttgttgccttctcttggattccatataatgaaaacaagaactatgaaggctcctctgatcttgttaatcttgaataccatatgggacctgttctttcttctcctattaaactttatgtgatatggtatggccattggaacccttctcatcaagccacaattagagactttcttaactccttttcatcttcttatgcacctcatccttctgtagctgattggtggcgaaccgttcgtctttacacagatcaaactggccaaaacatctcaactatttcactttctggtgaattctttgactataagtactcacaagggaagtaccttagcagattatcaatgcaatatgtgatcaagaatgcagtaagatcataccgtgaatctataccgttaaattataagaatggagtttacttagtgttaacatcttatgatgttcaagttcaagaattttgtagggctgtatgtggtttccattactttacatttccatcaattcttggagtgacagtcccttatgcttggattggttatagtgggaaacaatgtcctggtttctgtgcttatccttttgcttggcctaagaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0101G09-71AVB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0101G09.2" temp_strand="-" temp_description="C02HBa0101G09.2  AC215382.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0101G09 sequenced_by:kribb upload_account_name:korea">
        <position start="107367" stop="106110"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107069" g_stop="106410" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0101G09.2" gen_strand="-" ref_id="SGN-E697589" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0101G09.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107069" e_stop="106410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGACAATAAGTTTCATTTTTTTCATTATCTCCATTTCTTCTTGCTTCTATCTTCATCTTGCTTTTCACTTGTTGCCTTCTCTTGGATTCCATATAATGAAAACAAGAACTATGAAGGCTCCTCTGATCTTGTTAATCTTGAATACCATATGGGACCTGTTCTTTCTTCTCCTATTAAACTTTATGTGATATGGTATGGCCATTGGAACCCTTCTCATCAAGCCACAATTAGAGACTTTCTTAACTCCTTTTCATCTTCTTATGCACCTCATCCTTCTGTAGCTGATTGGTGGCGAACCGTTCGTCTTTACACAGATCAAACTGGCCAAAACATCTCAACTATTTCACTTTCTGGTGAATTCTTTGACTATAAGTACTCACAAGGGAAGTACCTTAGCAGATTATCAATGCAATATGTGATCAAGAATGCAGTAAGATCATACCGTGAATCTATACCGTTAAATTATAAGAATGGAGTTTACTTAGTGTTAACATCTTATGATGTTCAAGTTCAAGAATTTTGTAGGGCTGTATGTGGTTTCCATTACTTTACATTTCCATCAATTCTTGGAGTGACAGTCCCTTATGCTTGGATTGGTTATAGTGGGAAACAATGTCCTGGTTTCTGTGCTTATCCTTTTGCTTGGCCTAAGAATTCA</genome_strand>
        <mrna_strand>CGGTACAATAAGTTTCATTTTTTTCATTATCTCCATTTCTTCTTGCTTCTATCTTCATCTTGCTTTTCACTTGTTGCCTTCTCTTGGATTCCATATAATGAAAACAAGAACTATGAAGGCTCCTCTGATCTTGTTAATCTTGAATACCATATGGGACCTGTTCTTTCTTCTCCTATTAAACTTTATGTGATATGGTATGGCCATTGGAACCCTTCTCATCAAGCCACAATTAGAGACTTTCTTAACTCCTTTTCATCTTCTTATGCACCTCATCCTTCTGTAGCTGATTGGTGGCGAACCGTTCGTCTTTACACAGATCAAACTGGCCAAAACATCTCAACTATTTCACTTTCTGGTGAATTCTTTGACTATAAGTACTCACAAGGGAAGTACCTTAGCAGATTATCAATGCAATATGTGATCAAGAATGCAGTAAGATCATACCGTGAATCTATACCGTTAAATTATAAGAATGGAGTTTACTTAGTGTTAACATCTTATGATGTTCAAGTTCAAGAATTTTGTAGGGCTGTATGTGGTTTCCATTACTTTACATTTCCATCAATTCTTGGAGTGACAGTCCCTTATGCTTGGATTGGTTATAGTGGGAAACAATGTCCTGGTTTCTGTGCTTATCCTTTTGCTTGGCCTAAGAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>93</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="14465" PGL_stop="9364"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14465" e_stop="14329"/>
            <exon e_start="14226" e_stop="14052"/>
            <exon e_start="12855" e_stop="12734"/>
            <exon e_start="12641" e_stop="12434"/>
            <exon e_start="12335" e_stop="12190"/>
            <exon e_start="11932" e_stop="11609"/>
            <exon e_start="11220" e_stop="10970"/>
            <exon e_start="10691" e_stop="10491"/>
            <exon e_start="10163" e_stop="9364"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.993"/>
          <exon-intron don_prob="0.985" acc_prob="0.965" e_score="0.994"/>
          <exon-intron don_prob="0.838" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.837" acc_prob="0.672" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="14465" e_stop="14329" e_length="137"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="14328" i_stop="14227" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="14226" e_stop="14052" e_length="175"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.965">
            <gDNA_intron_boundary i_start="14051" i_stop="12856" i_length="1196"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12855" e_stop="12734" e_length="122"/>
          </exon>
          <intron i_serial="3" don_prob="0.838" acc_prob="1.000">
            <gDNA_intron_boundary i_start="12733" i_stop="12642" i_length="92"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12641" e_stop="12434" e_length="208"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="12433" i_stop="12336" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="12335" e_stop="12190" e_length="146"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="12189" i_stop="11933" i_length="257"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="11932" e_stop="11609" e_length="324"/>
          </exon>
          <intron i_serial="6" don_prob="0.837" acc_prob="0.672">
            <gDNA_intron_boundary i_start="11608" i_stop="11221" i_length="388"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="11220" e_stop="10970" e_length="251"/>
          </exon>
          <intron i_serial="7" don_prob="0.914" acc_prob="0.996">
            <gDNA_intron_boundary i_start="10969" i_stop="10692" i_length="278"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="10691" e_stop="10491" e_length="201"/>
          </exon>
          <intron i_serial="8" don_prob="0.975" acc_prob="0.996">
            <gDNA_intron_boundary i_start="10490" i_stop="10164" i_length="327"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="10163" e_stop="9364" e_length="800"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14465" stop="14329"/>
              <exon start="14226" stop="14052"/>
              <exon start="12855" stop="12734"/>
              <exon start="12641" stop="12434"/>
              <exon start="12335" stop="12190"/>
              <exon start="11932" stop="11609"/>
              <exon start="11220" stop="10970"/>
              <exon start="10691" stop="10491"/>
              <exon start="10163" stop="9514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14424" stop="14329"/>
              <exon start="14226" stop="14052"/>
              <exon start="12855" stop="12734"/>
              <exon start="12641" stop="12523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12550" stop="12434"/>
              <exon start="12335" stop="12190"/>
              <exon start="11932" stop="11609"/>
              <exon start="11220" stop="11176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12549" stop="12434"/>
              <exon start="12335" stop="12190"/>
              <exon start="11932" stop="11678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11116" stop="10970"/>
              <exon start="10691" stop="10491"/>
              <exon start="10163" stop="9671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427942" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11116" stop="10970"/>
              <exon start="10691" stop="10491"/>
              <exon start="10163" stop="9776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478186" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11069" stop="10970"/>
              <exon start="10691" stop="10491"/>
              <exon start="10163" stop="9885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E605934" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11038" stop="10970"/>
              <exon start="10691" stop="10491"/>
              <exon start="10163" stop="9560"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701110" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10578" stop="10491"/>
              <exon start="10163" stop="9579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10119" stop="9788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10078" stop="9412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10058" stop="9537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10009" stop="9364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392004" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACCCCTAAAACCTCCACAGCCTGCAAAACCTCATCTCACCCCCACGCCACCCCACCCCACCCCAACCCCTTCTGCTTACAAGATGTCCCTCTCAATGTGTTCACCTTTATACTCTCCATTAAAGCTTTCTTTCAAG : GAAGATAAAGGAAAGGGTAATTCTTGGGGATTGAGGCAAAGTTTAGGGAAGAAGAAATTGATGGTGGTGAGAGCTGGCCCAAAGAGAATAGCTTTTGATAAAGAATGCAGAAGAGCTTTACTTTCTGGTATCAATAAGCTTGCTGATGCTGTTTCTGTCACTTTAGGACCTAGAG : GCCGGAACGTAGTTCTCTCTGAAGCTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAG : GTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTATTAGCTGTTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAG : CCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAG : GCGTTCTTTTCCTACAGATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAAGGTGTATTACAAGACATTGCCATGTTGACAG : GTGCTGATTTTCTTTCTGGAGACTTAGGCCTGACTCTTGAAAGTGCAACCTCCGATCAGCTTGGTATTGCTCGGAAAATAACAATAACAAGTAACTCTACAACCATCGTGGCTCACCCCTCGACAAAAGCTGAAATACAAGCCAGAATAATGCAGATAAAGAAGGATCTTGCAGAAACAGATAATAAATCTATATCAGAGAAGCTTTCACAAAGAATAGCAAAACTCTCTGGTGGTGTGGCTATATTGAAG : GTAGGAGCACATACTGAAACAGAACTGGAAGACCGAAAGCTGAGAATTGAGGATGCAAAAAGTGCCACATTTGCTGCCATGGATGAAGGAATAGTGCCTGGTGGTGGTGCCACTTTTATTCATCTTTCTGAACAAATACCCTTGATAAAAGAATCTTTTCAGGATCCAGATGAGCAGATCGGTGCTGACATAATAGGAACG : GCACTTCTTGCACCAGCAAAGTTAATAGCTGCAAATGCAGGAGTGGATGGGGATACAGTTGTGGAAAAAGTTAGAGGTTGTGACTGGAAAATGGGGTATAACGCCATGACTGGAAGATATGAAGACCTTCTTGCTTCTGGTATTATTGATCCTTGCCGTGTTTCACGATGTGCCCTTCAGAATGCTGTCTCCGTTGCCGGTATAGTCCTAACTACTCAAGCAATAATGGTAGAGAAAACCAAGGAGCCCAAACCCCTTGTTCCTTATGTTCCTGGTATAACTCCTTAAAAGTTCGAAGGATAAACCTTGGTCGAAGCACTAGACAAGGAAGTTTCAATTCATGATGTTGTCTTACAAGGGAAGTTCTGGTTTGCCACTTTGACTTGGATGAGATATTTAGAAGAGTTGAAAATCTTGTGTCCAGCTGAAACTAGAGATTGTCTCATTGCAGATAAAATTGCTTCCAGACACGAGCATTTTCTAGCCTCGACTCTTGGTAGGAAAATATAGTTAATCCTCAAGCATACAGGAACTGTTTTGATCCCAATAGCACAGTCATCTTGTTTCAGTAGTACTTGTTCCTGCAGGCGGAGGATTGTCATTTTCAGGTTTCTATTAGTATTTTGATCAGTGAGATACGATTATACCAAATGTCTTGAAGCAAAGATGAATAGTTTCTATTAGTACTAAACTGCTGCATGTTGTTGTATGTTTGATATGAAAGGATATGAAATTAGAATCCCATATCATGAATAGGGCTAATATCAAAATTTCAACTTTTTAGTTTTTTACACCCCAAA</gDNA_template>
            <first_frame> H  P  *  N  L  H  S  L  Q  N  L  I  S  P  P  R  H  P  T  P  P  Q  P  L  L  L  T  R  C  P  S  Q  C  V  H  L  Y  T  L  H  *  S  F  L  S  R :   K  I  K  E  R  V  I  L  G  D  *  G  K  V  *  G  R  R  N  *  W  W  *  E  L  A  Q  R  E  *  L  L  I  K  N  A  E  E  L  Y  F  L  V  S  I  S  L  L  M  L  F  L  S  L  *  D  L  E  :  A  G  T  *  F  S  L  K  L  G  G  *  K  *  L  M  M  V  L  P  *  L  K  P  *  N  F  Q  I  Q  L  K  M  L  E  R  H  L  S  R  R :   L  Q  L  R  P  T  G  *  L  V  T  V  Q  L  L  Q  L  F  W  P  V  R  *  S  K  L  G  Y  *  L  L  I  L  A  L  T  L  Y  L  *  R  K  V  W  I  R  Q  *  E  S  W  S  I  L  *  R  R  K  V  I  L  L  E  E  M  M  I  *  K  :  P  *  L  Q  Y  Q  L  E  M  T  S  S  L  A  V  *  L  L  R  Q  L  T  R  L  V  L  M  E  *  Y  V  L  S  L  P  H  Q  L  K  P  R  S  W  L  K  K  E  *  R :   R  S  F  P  T  D  *  Q  G  V  H  V  T  S  F  H  Q  Q  S  R  K  I  Y  S  R  V  *  K  C  Q  S  S  G  N  R  S  K  D  M  *  C  Q  R  N  C  S  F  A  R  E  G  H  S  T  E  C  A  T  A  D  F  C  *  G  H  Y  K  P  S  A  R  N  T  C  H  *  Q  D  A  R  N  A  Q  C  C  C  C  A  M  S  R  I  S  R  W  K  E  R  C  I  T  R  H  C  H  V  D  R :   C  *  F  S  F  W  R  L  R  P  D  S  *  K  C  N  L  R  S  A  W  Y  C  S  E  N  N  N  N  K  *  L  Y  N  H  R  G  S  P  L  D  K  S  *  N  T  S  Q  N  N  A  D  K  E  G  S  C  R  N  R  *  *  I  Y  I  R  E  A  F  T  K  N  S  K  T  L  W  W  C  G  Y  I  E   : G  R  S  T  Y  *  N  R  T  G  R  P  K  A  E  N  *  G  C  K  K  C  H  I  C  C  H  G  *  R  N  S  A  W  W  W  C  H  F  Y  S  S  F  *  T  N  T  L  D  K  R  I  F  S  G  S  R  *  A  D  R  C  *  H  N  R  N   : G  T  S  C  T  S  K  V  N  S  C  K  C  R  S  G  W  G  Y  S  C  G  K  S  *  R  L  *  L  E  N  G  V  *  R  H  D  W  K  I  *  R  P  S  C  F  W  Y  Y  *  S  L  P  C  F  T  M  C  P  S  E  C  C  L  R  C  R  Y  S  P  N  Y  S  S  N  N  G  R  E  N  Q  G  A  Q  T  P  C  S  L  C  S  W  Y  N  S  L  K  V  R  R  I  N  L  G  R  S  T  R  Q  G  S  F  N  S  *  C  C  L  T  R  E  V  L  V  C  H  F  D  L  D  E  I  F  R  R  V  E  N  L  V  S  S  *  N  *  R  L  S  H  C  R  *  N  C  F  Q  T  R  A  F  S  S  L  D  S  W  *  E  N  I  V  N  P  Q  A  Y  R  N  C  F  D  P  N  S  T  V  I  L  F  Q  *  Y  L  F  L  Q  A  E  D  C  H  F  Q  V  S  I  S  I  L  I  S  E  I  R  L  Y  Q  M  S  *  S  K  D  E  *  F  L  L  V  L  N  C  C  M  L  L  Y  V  *  Y  E  R  I  *  N  *  N  P  I  S  *  I  G  L  I  S  K  F  Q  L  F  S  F  L  H  P  K </first_frame>
            <second_frame>  T  P  K  T  S  T  A  C  K  T  S  S  H  P  H  A  T  P  P  H  P  N  P  F  C  L  Q  D  V  P  L  N  V  F  T  F  I  L  S  I  K  A  F  F  Q   : G  R  *  R  K  G  *  F  L  G  I  E  A  K  F  R  E  E  E  I  D  G  G  E  S  W  P  K  E  N  S  F  *  *  R  M  Q  K  S  F  T  F  W  Y  Q  *  A  C  *  C  C  F  C  H  F  R  T  *  R :   P  E  R  S  S  L  *  S  W  G  A  E  N  N  *  *  W  C  Y  H  S  S  S  H  R  T  S  R  Y  N  *  K  C  W  S  D  T  Y  P  G   : G  C  N  *  D  Q  Q  V  S  W  *  R  Y  N  Y  C  N  C  F  G  P  *  D  D  Q  S  W  V  I  S  C  *  F  W  R  *  P  C  I  Y  E  E  R  Y  G  S  D  S  K  R  A  G  Q  Y  F  E  E  E  K  S  S  C  *  R  K  *  *  Y  K  S :   R  S  F  N  I  S  W  K  *  R  V  H  W  Q  F  D  C  *  G  N  *  Q  D  W  S  *  W  S  D  M  Y  *  V  F  L  I  S  *  N  L  D  H  G  *  R  R  N  E   : G  V  L  F  L  Q  I  D  K  G  Y  M  S  P  H  F  I  N  N  P  E  K  S  I  V  E  F  E  N  A  K  V  L  V  T  D  Q  K  I  C  S  V  K  E  I  V  P  L  L  E  K  A  T  Q  L  S  V  P  L  L  I  F  A  E  D  I  T  N  Q  V  L  E  T  L  V  I  N  K  M  Q  G  M  L  N  V  A  V  V  Q  C  P  G  F  R  D  G  K  K  G  V  L  Q  D  I  A  M  L  T   : G  A  D  F  L  S  G  D  L  G  L  T  L  E  S  A  T  S  D  Q  L  G  I  A  R  K  I  T  I  T  S  N  S  T  T  I  V  A  H  P  S  T  K  A  E  I  Q  A  R  I  M  Q  I  K  K  D  L  A  E  T  D  N  K  S  I  S  E  K  L  S  Q  R  I  A  K  L  S  G  G  V  A  I  L  K  :  V  G  A  H  T  E  T  E  L  E  D  R  K  L  R  I  E  D  A  K  S  A  T  F  A  A  M  D  E  G  I  V  P  G  G  G  A  T  F  I  H  L  S  E  Q  I  P  L  I  K  E  S  F  Q  D  P  D  E  Q  I  G  A  D  I  I  G  T  :  A  L  L  A  P  A  K  L  I  A  A  N  A  G  V  D  G  D  T  V  V  E  K  V  R  G  C  D  W  K  M  G  Y  N  A  M  T  G  R  Y  E  D  L  L  A  S  G  I  I  D  P  C  R  V  S  R  C  A  L  Q  N  A  V  S  V  A  G  I  V  L  T  T  Q  A  I  M  V  E  K  T  K  E  P  K  P  L  V  P  Y  V  P  G  I  T  P  *  K  F  E  G  *  T  L  V  E  A  L  D  K  E  V  S  I  H  D  V  V  L  Q  G  K  F  W  F  A  T  L  T  W  M  R  Y  L  E  E  L  K  I  L  C  P  A  E  T  R  D  C  L  I  A  D  K  I  A  S  R  H  E  H  F  L  A  S  T  L  G  R  K  I  *  L  I  L  K  H  T  G  T  V  L  I  P  I  A  Q  S  S  C  F  S  S  T  C  S  C  R  R  R  I  V  I  F  R  F  L  L  V  F  *  S  V  R  Y  D  Y  T  K  C  L  E  A  K  M  N  S  F  Y  *  Y  *  T  A  A  C  C  C  M  F  D  M  K  G  Y  E  I  R  I  P  Y  H  E  *  G  *  Y  Q  N  F  N  F  L  V  F  Y  T  P   </second_frame>
            <third_frame>   P  L  K  P  P  Q  P  A  K  P  H  L  T  P  T  P  P  H  P  T  P  T  P  S  A  Y  K  M  S  L  S  M  C  S  P  L  Y  S  P  L  K  L  S  F  K  :  E  D  K  G  K  G  N  S  W  G  L  R  Q  S  L  G  K  K  K  L  M  V  V  R  A  G  P  K  R  I  A  F  D  K  E  C  R  R  A  L  L  S  G  I  N  K  L  A  D  A  V  S  V  T  L  G  P  R   : G  R  N  V  V  L  S  E  A  G  G  L  K  I  I  N  D  G  V  T  I  A  Q  A  I  E  L  P  D  T  I  E  N  A  G  A  T  L  I  Q  E  :  V  A  T  K  T  N  R  L  A  G  D  G  T  T  T  A  I  V  L  A  R  E  M  I  K  A  G  L  L  A  V  D  F  G  A  N  P  V  S  M  K  K  G  M  D  Q  T  V  R  E  L  V  N  T  L  K  K  K  S  H  P  V  R  G  N  D  D  I  K   : A  V  A  S  I  S  A  G  N  D  E  F  I  G  S  L  I  A  E  A  I  N  K  I  G  P  D  G  V  I  C  I  E  S  S  S  S  A  E  T  S  I  M  V  E  E  G  M  K  :  A  F  F  S  Y  R  L  T  R  G  T  C  H  L  I  S  S  T  I  P  K  N  L  *  *  S  L  K  M  P  K  F  W  *  P  I  K  R  Y  V  V  S  K  K  L  F  L  C  *  R  R  P  L  N  *  V  C  H  C  *  F  L  L  R  T  L  Q  T  K  C  *  K  H  L  S  L  T  R  C  K  E  C  S  M  L  L  L  C  N  V  Q  D  F  E  M  E  R  K  V  Y  Y  K  T  L  P  C  *  Q  :  V  L  I  F  F  L  E  T  *  A  *  L  L  K  V  Q  P  P  I  S  L  V  L  L  G  K  *  Q  *  Q  V  T  L  Q  P  S  W  L  T  P  R  Q  K  L  K  Y  K  P  E  *  C  R  *  R  R  I  L  Q  K  Q  I  I  N  L  Y  Q  R  S  F  H  K  E  *  Q  N  S  L  V  V  W  L  Y  *  R :   *  E  H  I  L  K  Q  N  W  K  T  E  S  *  E  L  R  M  Q  K  V  P  H  L  L  P  W  M  K  E  *  C  L  V  V  V  P  L  L  F  I  F  L  N  K  Y  P  *  *  K  N  L  F  R  I  Q  M  S  R  S  V  L  T  *  *  E  R :   H  F  L  H  Q  Q  S  *  *  L  Q  M  Q  E  W  M  G  I  Q  L  W  K  K  L  E  V  V  T  G  K  W  G  I  T  P  *  L  E  D  M  K  T  F  L  L  L  V  L  L  I  L  A  V  F  H  D  V  P  F  R  M  L  S  P  L  P  V  *  S  *  L  L  K  Q  *  W  *  R  K  P  R  S  P  N  P  L  F  L  M  F  L  V  *  L  L  K  S  S  K  D  K  P  W  S  K  H  *  T  R  K  F  Q  F  M  M  L  S  Y  K  G  S  S  G  L  P  L  *  L  G  *  D  I  *  K  S  *  K  S  C  V  Q  L  K  L  E  I  V  S  L  Q  I  K  L  L  P  D  T  S  I  F  *  P  R  L  L  V  G  K  Y  S  *  S  S  S  I  Q  E  L  F  *  S  Q  *  H  S  H  L  V  S  V  V  L  V  P  A  G  G  G  L  S  F  S  G  F  Y  *  Y  F  D  Q  *  D  T  I  I  P  N  V  L  K  Q  R  *  I  V  S  I  S  T  K  L  L  H  V  V  V  C  L  I  *  K  D  M  K  L  E  S  H  I  M  N  R  A  N  I  K  I  S  T  F  *  F  F  T  P  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12202" stop="12190"/>
                    <exon start="11932" stop="11609"/>
                    <exon start="11220" stop="10970"/>
                    <exon start="10691" stop="10491"/>
                    <exon start="10163" stop="9876"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1074</number_coding_nucleotides>
                  <number_encoded_amino_acids>358</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRNEGVLFLQIDKGYMSPHFINNPEKSIVEFENAKVLVTDQKICSVKEIVPLLEKATQLSVPLLIFAEDITNQVLETLVINKMQGMLNVAVVQCPGFRDGKKGVLQDIAMLTGADFLSGDLGLTLESATSDQLGIARKITITSNSTTIVAHPSTKAEIQARIMQIKKDLAETDNKSISEKLSQRIAKLSGGVAILKVGAHTETELEDRKLRIEDAKSATFAAMDEGIVPGGGATFIHLSEQIPLIKESFQDPDEQIGADIIGTALLAPAKLIAANAGVDGDTVVEKVRGCDWKMGYNAMTGRYEDLLASGIIDPCRVSRCALQNAVSVAGIVLTTQAIMVEKTKEPKPLVPYVPGITP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9860" stop="9654"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLVEALDKEVSIHDVVLQGKFWFATLTWMRYLEELKILCPAETRDCLIADKIASRHEHFLASTLGRKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="14424" e_stop="14329"/>
            <exon e_start="14226" e_stop="14052"/>
            <exon e_start="12855" e_stop="12734"/>
            <exon e_start="12641" e_stop="12434"/>
            <exon e_start="12335" e_stop="12190"/>
            <exon e_start="11915" e_stop="11630"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.844"/>
          <exon-intron don_prob="0.985" acc_prob="0.965" e_score="0.994"/>
          <exon-intron don_prob="0.838" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="0.986"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="0.986"/>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.844">
            <gDNA_exon_boundary e_start="14424" e_stop="14329" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="14328" i_stop="14227" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="14226" e_stop="14052" e_length="175"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.965">
            <gDNA_intron_boundary i_start="14051" i_stop="12856" i_length="1196"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12855" e_stop="12734" e_length="122"/>
          </exon>
          <intron i_serial="3" don_prob="0.838" acc_prob="1.000">
            <gDNA_intron_boundary i_start="12733" i_stop="12642" i_length="92"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="12641" e_stop="12434" e_length="208"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="12433" i_stop="12336" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="12335" e_stop="12190" e_length="146"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="12189" i_stop="11916" i_length="274"/>
          </intron>
          <exon e_serial="6" e_score="0.965">
            <gDNA_exon_boundary e_start="11915" e_stop="11630" e_length="286"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14424" stop="14329"/>
              <exon start="14226" stop="14052"/>
              <exon start="12855" stop="12734"/>
              <exon start="12641" stop="12523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12855" stop="12734"/>
              <exon start="12641" stop="12434"/>
              <exon start="12335" stop="12190"/>
              <exon start="11915" stop="11782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12559" stop="12434"/>
              <exon start="12335" stop="12190"/>
              <exon start="11915" stop="11630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607573" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCACGCCACCCCACCCCACCCCAACCCCTTCTGCTTACAAGATGTCCCTCTCAATGTGTTCACCTTTATACTCTCCATTAAAGCTTTCTTTCAAG : GAAGATAAAGGAAAGGGTAATTCTTGGGGATTGAGGCAAAGTTTAGGGAAGAAGAAATTGATGGTGGTGAGAGCTGGCCCAAAGAGAATAGCTTTTGATAAAGAATGCAGAAGAGCTTTACTTTCTGGTATCAATAAGCTTGCTGATGCTGTTTCTGTCACTTTAGGACCTAGAG : GCCGGAACGTAGTTCTCTCTGAAGCTGGGGGGCTGAAAATAATTAATGATGGTGTTACCATAGCTCAAGCCATAGAACTTCCAGATACAATTGAAAATGCTGGAGCGACACTTATCCAGGAG : GTTGCAACTAAGACCAACAGGTTAGCTGGTGACGGTACAACTACTGCAATTGTTTTGGCCCGTGAGATGATCAAAGCTGGGTTATTAGCTGTTGATTTTGGCGCTAACCCTGTATCTATGAAGAAAGGTATGGATCAGACAGTAAGAGAGCTGGTCAATACTTTGAAGAAGAAAAGTCATCCTGTTAGAGGAAATGATGATATAAAAG : CCGTAGCTTCAATATCAGCTGGAAATGACGAGTTCATTGGCAGTTTGATTGCTGAGGCAATTAACAAGATTGGTCCTGATGGAGTGATATGTATTGAGTCTTCCTCATCAGCTGAAACCTCGATCATGGTTGAAGAAGGAATGAAG : ATTGACAAGGGGTACATGTCACCTCATTTCATCAACAATCCCGAAAAATCTATAGTAGAGTTTGAAAATGCCAAAGTTCTGGTAACCGATCAAAAGATATGTAGTGTCAAAGAAATTGTTCCTTTGCTAGAGAAGGCCACTCAACTGAGTGTGCCACTGCTGATTTTTGCTGAGGACATTACAAACCAAGTGCTAGAAACACTTGTCATTAACAAGATGCAAGGAATGCTCAATGTTGCTGTTGTGCAATGTCCAGGATTTCGAGATGGAAAGAAAGGTGTATTAC</gDNA_template>
            <first_frame> P  T  P  P  H  P  T  P  T  P  S  A  Y  K  M  S  L  S  M  C  S  P  L  Y  S  P  L  K  L  S  F  K  :  E  D  K  G  K  G  N  S  W  G  L  R  Q  S  L  G  K  K  K  L  M  V  V  R  A  G  P  K  R  I  A  F  D  K  E  C  R  R  A  L  L  S  G  I  N  K  L  A  D  A  V  S  V  T  L  G  P  R   : G  R  N  V  V  L  S  E  A  G  G  L  K  I  I  N  D  G  V  T  I  A  Q  A  I  E  L  P  D  T  I  E  N  A  G  A  T  L  I  Q  E  :  V  A  T  K  T  N  R  L  A  G  D  G  T  T  T  A  I  V  L  A  R  E  M  I  K  A  G  L  L  A  V  D  F  G  A  N  P  V  S  M  K  K  G  M  D  Q  T  V  R  E  L  V  N  T  L  K  K  K  S  H  P  V  R  G  N  D  D  I  K   : A  V  A  S  I  S  A  G  N  D  E  F  I  G  S  L  I  A  E  A  I  N  K  I  G  P  D  G  V  I  C  I  E  S  S  S  S  A  E  T  S  I  M  V  E  E  G  M  K  :  I  D  K  G  Y  M  S  P  H  F  I  N  N  P  E  K  S  I  V  E  F  E  N  A  K  V  L  V  T  D  Q  K  I  C  S  V  K  E  I  V  P  L  L  E  K  A  T  Q  L  S  V  P  L  L  I  F  A  E  D  I  T  N  Q  V  L  E  T  L  V  I  N  K  M  Q  G  M  L  N  V  A  V  V  Q  C  P  G  F  R  D  G  K  K  G  V  L  </first_frame>
            <second_frame>  P  R  H  P  T  P  P  Q  P  L  L  L  T  R  C  P  S  Q  C  V  H  L  Y  T  L  H  *  S  F  L  S  R :   K  I  K  E  R  V  I  L  G  D  *  G  K  V  *  G  R  R  N  *  W  W  *  E  L  A  Q  R  E  *  L  L  I  K  N  A  E  E  L  Y  F  L  V  S  I  S  L  L  M  L  F  L  S  L  *  D  L  E  :  A  G  T  *  F  S  L  K  L  G  G  *  K  *  L  M  M  V  L  P  *  L  K  P  *  N  F  Q  I  Q  L  K  M  L  E  R  H  L  S  R  R :   L  Q  L  R  P  T  G  *  L  V  T  V  Q  L  L  Q  L  F  W  P  V  R  *  S  K  L  G  Y  *  L  L  I  L  A  L  T  L  Y  L  *  R  K  V  W  I  R  Q  *  E  S  W  S  I  L  *  R  R  K  V  I  L  L  E  E  M  M  I  *  K  :  P  *  L  Q  Y  Q  L  E  M  T  S  S  L  A  V  *  L  L  R  Q  L  T  R  L  V  L  M  E  *  Y  V  L  S  L  P  H  Q  L  K  P  R  S  W  L  K  K  E  *  R :   L  T  R  G  T  C  H  L  I  S  S  T  I  P  K  N  L  *  *  S  L  K  M  P  K  F  W  *  P  I  K  R  Y  V  V  S  K  K  L  F  L  C  *  R  R  P  L  N  *  V  C  H  C  *  F  L  L  R  T  L  Q  T  K  C  *  K  H  L  S  L  T  R  C  K  E  C  S  M  L  L  L  C  N  V  Q  D  F  E  M  E  R  K  V  Y  Y </second_frame>
            <third_frame>   H  A  T  P  P  H  P  N  P  F  C  L  Q  D  V  P  L  N  V  F  T  F  I  L  S  I  K  A  F  F  Q   : G  R  *  R  K  G  *  F  L  G  I  E  A  K  F  R  E  E  E  I  D  G  G  E  S  W  P  K  E  N  S  F  *  *  R  M  Q  K  S  F  T  F  W  Y  Q  *  A  C  *  C  C  F  C  H  F  R  T  *  R :   P  E  R  S  S  L  *  S  W  G  A  E  N  N  *  *  W  C  Y  H  S  S  S  H  R  T  S  R  Y  N  *  K  C  W  S  D  T  Y  P  G   : G  C  N  *  D  Q  Q  V  S  W  *  R  Y  N  Y  C  N  C  F  G  P  *  D  D  Q  S  W  V  I  S  C  *  F  W  R  *  P  C  I  Y  E  E  R  Y  G  S  D  S  K  R  A  G  Q  Y  F  E  E  E  K  S  S  C  *  R  K  *  *  Y  K  S :   R  S  F  N  I  S  W  K  *  R  V  H  W  Q  F  D  C  *  G  N  *  Q  D  W  S  *  W  S  D  M  Y  *  V  F  L  I  S  *  N  L  D  H  G  *  R  R  N  E   : D  *  Q  G  V  H  V  T  S  F  H  Q  Q  S  R  K  I  Y  S  R  V  *  K  C  Q  S  S  G  N  R  S  K  D  M  *  C  Q  R  N  C  S  F  A  R  E  G  H  S  T  E  C  A  T  A  D  F  C  *  G  H  Y  K  P  S  A  R  N  T  C  H  *  Q  D  A  R  N  A  Q  C  C  C  C  A  M  S  R  I  S  R  W  K  E  R  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14424" stop="14329"/>
                    <exon start="14226" stop="14052"/>
                    <exon start="12855" stop="12734"/>
                    <exon start="12641" stop="12434"/>
                    <exon start="12335" stop="12190"/>
                    <exon start="11915" stop="11631"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1032</number_coding_nucleotides>
                  <number_encoded_amino_acids>344</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PTPPHPTPTPSAYKMSLSMCSPLYSPLKLSFKEDKGKGNSWGLRQSLGKKKLMVVRAGPKRIAFDKECRRALLSGINKLADAVSVTLGPRGRNVVLSEAGGLKIINDGVTIAQAIELPDTIENAGATLIQEVATKTNRLAGDGTTTAIVLAREMIKAGLLAVDFGANPVSMKKGMDQTVRELVNTLKKKSHPVRGNDDIKAVASISAGNDEFIGSLIAEAINKIGPDGVICIESSSSAETSIMVEEGMKIDKGYMSPHFINNPEKSIVEFENAKVLVTDQKICSVKEIVPLLEKATQLSVPLLIFAEDITNQVLETLVINKMQGMLNVAVVQCPGFRDGKKGVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="9388" PGL_stop="9948"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9388" e_stop="9948"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="9388" e_stop="9948" e_length="561"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9388" stop="9948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427943" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGAAATTTTGATATTAGCCCTATTCATGATATGGGATTCTAATTTCATATCCTTTCATATCAAACATACAACAACATGCAGCAGTTTAGTACTAATAGAAACTATTCATCTTTGCTTCAAGACATTTGGTATAATCGTATCTCACTGATCAAAATACTAATAGAAACCTGAAAATGACAATCCTCCGCCTGCAGGAACAAGTACTACTGAAACAAGATGACTGTGCTATTGGGATCAAAACAGTTCCTGTATGCTTGAGGATTAACTATATTTTCCTACCAAGAGTCGAGGCTAGAAAATGCTCGTGTCTGGAAGCAATTTTATCTGCAATGAGACAATCTCTAGTTTCAGCTGGACACAAGATTTTCAACTCTTCTAAATATCTCATCCAAGTCAAAGTGGCAAACCAGAACTTCCCTTGTAAGACAACATCATGAATTGAAACTTCCTTGTCTAGTGCTTCGACCAAGGTTTATCCTTCGAACTTTTAAGGAGTTATACCAGGAACATAAGGAACAAGGGGTTTGGGCTCCTTGGTTTTCTCTACCATTATTGCTTGA</gDNA_template>
            <first_frame> L  K  F  *  Y  *  P  Y  S  *  Y  G  I  L  I  S  Y  P  F  I  S  N  I  Q  Q  H  A  A  V  *  Y  *  *  K  L  F  I  F  A  S  R  H  L  V  *  S  Y  L  T  D  Q  N  T  N  R  N  L  K  M  T  I  L  R  L  Q  E  Q  V  L  L  K  Q  D  D  C  A  I  G  I  K  T  V  P  V  C  L  R  I  N  Y  I  F  L  P  R  V  E  A  R  K  C  S  C  L  E  A  I  L  S  A  M  R  Q  S  L  V  S  A  G  H  K  I  F  N  S  S  K  Y  L  I  Q  V  K  V  A  N  Q  N  F  P  C  K  T  T  S  *  I  E  T  S  L  S  S  A  S  T  K  V  Y  P  S  N  F  *  G  V  I  P  G  T  *  G  T  R  G  L  G  S  L  V  F  S  T  I  I  A  * </first_frame>
            <second_frame>  *  N  F  D  I  S  P  I  H  D  M  G  F  *  F  H  I  L  S  Y  Q  T  Y  N  N  M  Q  Q  F  S  T  N  R  N  Y  S  S  L  L  Q  D  I  W  Y  N  R  I  S  L  I  K  I  L  I  E  T  *  K  *  Q  S  S  A  C  R  N  K  Y  Y  *  N  K  M  T  V  L  L  G  S  K  Q  F  L  Y  A  *  G  L  T  I  F  S  Y  Q  E  S  R  L  E  N  A  R  V  W  K  Q  F  Y  L  Q  *  D  N  L  *  F  Q  L  D  T  R  F  S  T  L  L  N  I  S  S  K  S  K  W  Q  T  R  T  S  L  V  R  Q  H  H  E  L  K  L  P  C  L  V  L  R  P  R  F  I  L  R  T  F  K  E  L  Y  Q  E  H  K  E  Q  G  V  W  A  P  W  F  S  L  P  L  L  L   </second_frame>
            <third_frame>   E  I  L  I  L  A  L  F  M  I  W  D  S  N  F  I  S  F  H  I  K  H  T  T  T  C  S  S  L  V  L  I  E  T  I  H  L  C  F  K  T  F  G  I  I  V  S  H  *  S  K  Y  *  *  K  P  E  N  D  N  P  P  P  A  G  T  S  T  T  E  T  R  *  L  C  Y  W  D  Q  N  S  S  C  M  L  E  D  *  L  Y  F  P  T  K  S  R  G  *  K  M  L  V  S  G  S  N  F  I  C  N  E  T  I  S  S  F  S  W  T  Q  D  F  Q  L  F  *  I  S  H  P  S  Q  S  G  K  P  E  L  P  L  *  D  N  I  M  N  *  N  F  L  V  *  C  F  D  Q  G  L  S  F  E  L  L  R  S  Y  T  R  N  I  R  N  K  G  F  G  L  L  G  F  L  Y  H  Y  C  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9523" stop="9825"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SYLTDQNTNRNLKMTILRLQEQVLLKQDDCAIGIKTVPVCLRINYIFLPRVEARKCSCLEAILSAMRQSLVSAGHKIFNSSKYLIQVKVANQNFPCKTTS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9734" stop="9946"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQLDTRFSTLLNISSKSKWQTRTSLVRQHHELKLPCLVLRPRFILRTFKELYQEHKEQGVWAPWFSLPLLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="19122" PGL_stop="15335"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19122" e_stop="18953"/>
            <exon e_start="16895" e_stop="16636"/>
            <exon e_start="15777" e_stop="15335"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.773" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19122" e_stop="18953" e_length="170"/>
          </exon>
          <intron i_serial="1" don_prob="0.773" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16895" e_stop="16636" e_length="260"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.984">
            <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="15777" e_stop="15335" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19122" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19117" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560403" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19099" stop="18953"/>
              <exon start="16895" stop="16690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19079" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19077" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19066" stop="18953"/>
              <exon start="16895" stop="16809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335670" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19046" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19034" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702243" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18996" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354115" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTACTGTACTTTTTATTTTCCATTTTCCCCTAATACATACAATACAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG : TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTG : ATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTGGTCTTTGATACAACAACTGTTTACCCCCTGCAGTTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAATTCAAGTTTTTCATCTCTTCTGGCATTGCATTTATAAATTCCTAAACACCCTTCAGAATATTTTTTTTACAAGGCATAGTTGATGTGGTAAAATAATATTGCTCA</gDNA_template>
            <first_frame> S  T  V  L  F  I  F  H  F  P  L  I  H  T  I  Q  V  L  A  Q  L  Y  I  Q  S  R  F  L  K  E  K  N  G  Y  K  V  V  G  F  K  G  C  F  I  S  Q  D  L  S  I  S  Q  G  F  C  H  C :   A  Q  G  F  E  V  H  R  I  S  *  M  G  *  S  *  R  *  F  C  N  N  W  H  H  *  S  C  S  E  T  F  R  *  C  C  L  R  *  I  S  *  S  W  V  F  C  G  T  I  W  Q  F  W  C  C  *  K  C  Q  G  F  Q  R  Y  Q  F  S  C  F  R  E  G  S  G  I  *  *  G  T  E  Q  R  S  C  S   : D  Q  C  K  L  L  *  T  R  M  D  F  E  S  *  D  E  Q  T  R  R  G  Q  S  I  D  G  P  *  P  V  Y  Q  V  L  *  R  G  R  R  E  A  L  I  *  N  L  T  K  V  E  Q  E  H  N  S  L  Q  D  F  F  T  M  H  K  E  A  L  F  L  S  P  G  S  W  I  L  S  S  A  I  W  S  L  I  Q  Q  L  F  T  P  C  S  S  S  L  S  L  Q  I  I  Q  C  F  W  M  L  N  F  I  *  V  K  F  K  F  F  I  S  S  G  I  A  F  I  N  S  *  T  P  F  R  I  F  F  L  Q  G  I  V  D  V  V  K  *  Y  C  S </first_frame>
            <second_frame>  L  L  Y  F  L  F  S  I  F  P  *  Y  I  Q  Y  K  C  W  H  S  S  T  S  K  A  D  S  *  K  K  K  M  A  T  K  L  W  A  S  R  A  A  S  Y  L  R  I  S  A  F  H  R  A  F  A  T   : V  P  K  D  L  K  Y  T  E  S  H  E  W  V  K  V  D  G  N  S  A  T  I  G  I  T  D  H  A  Q  K  H  L  G  D  V  V  Y  V  E  F  P  E  V  G  S  S  V  E  Q  F  G  S  F  G  A  V  E  S  V  K  A  S  S  D  I  N  S  P  V  S  G  K  V  V  E  F  N  E  E  L  N  N  G  P  A  L  :  I  N  A  N  C  Y  E  Q  G  W  I  L  K  V  E  M  N  K  P  D  E  V  K  A  L  M  D  P  D  Q  Y  T  K  F  C  D  E  E  D  A  K  H  *  F  E  T  S  P  K  L  S  K  N  T  I  P  C  R  I  F  S  Q  C  I  K  R  L  Y  S  *  A  P  E  A  G  Y  *  V  V  L  F  G  L  *  Y  N  N  C  L  P  P  A  V  L  L  F  L  C  K  *  F  S  V  F  G  C  *  T  S  S  R  L  N  S  S  F  S  S  L  L  A  L  H  L  *  I  P  K  H  P  S  E  Y  F  F  Y  K  A  *  L  M  W  *  N  N  I  A   </second_frame>
            <third_frame>   Y  C  T  F  Y  F  P  F  S  P  N  T  Y  N  T  S  V  G  T  A  L  H  P  K  Q  I  P  K  R  K  K  W  L  Q  S  C  G  L  Q  G  L  L  H  I  S  G  S  Q  H  F  T  G  L  L  P  L  :  C  P  R  I  *  S  T  Q  N  L  M  N  G  L  K  L  T  V  I  L  Q  Q  L  A  S  L  I  M  L  R  N  I  *  V  M  L  F  T  L  N  F  L  K  L  G  L  L  W  N  N  L  A  V  L  V  L  L  K  V  S  R  L  P  A  I  S  I  L  L  F  Q  G  R  *  W  N  L  M  R  N  *  T  T  V  L  L  * :   S  M  Q  T  A  M  N  K  D  G  F  *  K  L  R  *  T  N  P  T  R  S  K  H  *  W  T  L  T  S  I  P  S  F  V  T  R  K  T  R  S  T  D  L  K  P  H  Q  S  *  A  R  T  Q  F  P  A  G  F  F  H  N  A  *  R  G  F  I  P  K  P  R  K  L  D  T  K  *  C  Y  L  V  F  D  T  T  T  V  Y  P  L  Q  F  F  S  F  F  A  N  N  S  V  F  L  D  V  E  L  H  L  G  *  I  Q  V  F  H  L  F  W  H  C  I  Y  K  F  L  N  T  L  Q  N  I  F  F  T  R  H  S  *  C  G  K  I  I  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19037" stop="18953"/>
                    <exon start="16895" stop="16636"/>
                    <exon start="15777" stop="15649"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKMATKLWASRAASYLRISAFHRAFATVPKDLKYTESHEWVKVDGNSATIGITDHAQKHLGDVVYVEFPEVGSSVEQFGSFGAVESVKASSDINSPVSGKVVEFNEELNNGPALINANCYEQGWILKVEMNKPDEVKALMDPDQYTKFCDEEDAKH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15643" stop="15446"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLTKVEQEHNSLQDFFTMHKEALFLSPGSWILSSAIWSLIQQLFTPCSSSLSLQIIQCFWMLNFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19122" e_stop="18953"/>
            <exon e_start="16895" e_stop="16636"/>
            <exon e_start="15777" e_stop="15534"/>
            <exon e_start="15500" e_stop="15353"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.773" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.975"/>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19122" e_stop="18953" e_length="170"/>
          </exon>
          <intron i_serial="1" don_prob="0.773" acc_prob="0.998">
            <gDNA_intron_boundary i_start="18952" i_stop="16896" i_length="2057"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16895" e_stop="16636" e_length="260"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.984">
            <gDNA_intron_boundary i_start="16635" i_stop="15778" i_length="858"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="15777" e_stop="15534" e_length="244"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="15533" i_stop="15501" i_length="33"/>
          </intron>
          <exon e_serial="4" e_score="0.912">
            <gDNA_exon_boundary e_start="15500" e_stop="15353" e_length="148"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19122" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19117" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560403" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19099" stop="18953"/>
              <exon start="16895" stop="16690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19066" stop="18953"/>
              <exon start="16895" stop="16809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335670" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19046" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19022" stop="18953"/>
              <exon start="16895" stop="16636"/>
              <exon start="15777" stop="15534"/>
              <exon start="15500" stop="15353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622431" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTACTGTACTTTTTATTTTCCATTTTCCCCTAATACATACAATACAAGTGTTGGCACAGCTCTACATCCAAAGCAGATTCCTAAAAGAAAAAAATGGCTACAAAGTTGTGGGCTTCAAGGGCTGCTTCATATCTCAGGATCTCAGCATTTCACAGGGCTTTTGCCACTG : TGCCCAAGGATTTGAAGTACACAGAATCTCATGAATGGGTTAAAGTTGACGGTAATTCTGCAACAATTGGCATCACTGATCATGCTCAGAAACATTTAGGTGATGTTGTTTACGTTGAATTTCCTGAAGTTGGGTCTTCTGTGGAACAATTTGGCAGTTTTGGTGCTGTTGAAAGTGTCAAGGCTTCCAGCGATATCAATTCTCCTGTTTCAGGGAAGGTAGTGGAATTTAATGAGGAACTGAACAACGGTCCTGCTCTG : ATCAATGCAAACTGCTATGAACAAGGATGGATTTTGAAAGTTGAGATGAACAAACCCGACGAGGTCAAAGCATTGATGGACCCTGACCAGTATACCAAGTTTTGTGACGAGGAAGACGCGAAGCACTGATTTGAAACCTCACCAAAGTTGAGCAAGAACACAATTCCCTGCAGGATTTTTTCACAATGCATAAAGAGGCTTTATTCCTAAGCCCCGGAAGCTGGATACTAAGTAGTGCTATTTG : TTCTTCTCTTTCTTTGCAAATAATTCAGTGTTTTTGGATGTTGAACTTCATCTAGGTTAAATTCAAGTTTTTCATCTCTTCTGGCATTGCATTTATAAATTCCTAAACACCCTTCAGAATATTTTTTTTACAAGGCATAGTTGATGTG</gDNA_template>
            <first_frame> S  T  V  L  F  I  F  H  F  P  L  I  H  T  I  Q  V  L  A  Q  L  Y  I  Q  S  R  F  L  K  E  K  N  G  Y  K  V  V  G  F  K  G  C  F  I  S  Q  D  L  S  I  S  Q  G  F  C  H  C :   A  Q  G  F  E  V  H  R  I  S  *  M  G  *  S  *  R  *  F  C  N  N  W  H  H  *  S  C  S  E  T  F  R  *  C  C  L  R  *  I  S  *  S  W  V  F  C  G  T  I  W  Q  F  W  C  C  *  K  C  Q  G  F  Q  R  Y  Q  F  S  C  F  R  E  G  S  G  I  *  *  G  T  E  Q  R  S  C  S   : D  Q  C  K  L  L  *  T  R  M  D  F  E  S  *  D  E  Q  T  R  R  G  Q  S  I  D  G  P  *  P  V  Y  Q  V  L  *  R  G  R  R  E  A  L  I  *  N  L  T  K  V  E  Q  E  H  N  S  L  Q  D  F  F  T  M  H  K  E  A  L  F  L  S  P  G  S  W  I  L  S  S  A  I  C :   S  S  L  S  L  Q  I  I  Q  C  F  W  M  L  N  F  I  *  V  K  F  K  F  F  I  S  S  G  I  A  F  I  N  S  *  T  P  F  R  I  F  F  L  Q  G  I  V  D  V </first_frame>
            <second_frame>  L  L  Y  F  L  F  S  I  F  P  *  Y  I  Q  Y  K  C  W  H  S  S  T  S  K  A  D  S  *  K  K  K  M  A  T  K  L  W  A  S  R  A  A  S  Y  L  R  I  S  A  F  H  R  A  F  A  T   : V  P  K  D  L  K  Y  T  E  S  H  E  W  V  K  V  D  G  N  S  A  T  I  G  I  T  D  H  A  Q  K  H  L  G  D  V  V  Y  V  E  F  P  E  V  G  S  S  V  E  Q  F  G  S  F  G  A  V  E  S  V  K  A  S  S  D  I  N  S  P  V  S  G  K  V  V  E  F  N  E  E  L  N  N  G  P  A  L  :  I  N  A  N  C  Y  E  Q  G  W  I  L  K  V  E  M  N  K  P  D  E  V  K  A  L  M  D  P  D  Q  Y  T  K  F  C  D  E  E  D  A  K  H  *  F  E  T  S  P  K  L  S  K  N  T  I  P  C  R  I  F  S  Q  C  I  K  R  L  Y  S  *  A  P  E  A  G  Y  *  V  V  L  F   : V  L  L  F  L  C  K  *  F  S  V  F  G  C  *  T  S  S  R  L  N  S  S  F  S  S  L  L  A  L  H  L  *  I  P  K  H  P  S  E  Y  F  F  Y  K  A  *  L  M   </second_frame>
            <third_frame>   Y  C  T  F  Y  F  P  F  S  P  N  T  Y  N  T  S  V  G  T  A  L  H  P  K  Q  I  P  K  R  K  K  W  L  Q  S  C  G  L  Q  G  L  L  H  I  S  G  S  Q  H  F  T  G  L  L  P  L  :  C  P  R  I  *  S  T  Q  N  L  M  N  G  L  K  L  T  V  I  L  Q  Q  L  A  S  L  I  M  L  R  N  I  *  V  M  L  F  T  L  N  F  L  K  L  G  L  L  W  N  N  L  A  V  L  V  L  L  K  V  S  R  L  P  A  I  S  I  L  L  F  Q  G  R  *  W  N  L  M  R  N  *  T  T  V  L  L  * :   S  M  Q  T  A  M  N  K  D  G  F  *  K  L  R  *  T  N  P  T  R  S  K  H  *  W  T  L  T  S  I  P  S  F  V  T  R  K  T  R  S  T  D  L  K  P  H  Q  S  *  A  R  T  Q  F  P  A  G  F  F  H  N  A  *  R  G  F  I  P  K  P  R  K  L  D  T  K  *  C  Y  L  :  F  F  S  F  F  A  N  N  S  V  F  L  D  V  E  L  H  L  G  *  I  Q  V  F  H  L  F  W  H  C  I  Y  K  F  L  N  T  L  Q  N  I  F  F  T  R  H  S  *  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19037" stop="18953"/>
                    <exon start="16895" stop="16636"/>
                    <exon start="15777" stop="15649"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKKMATKLWASRAASYLRISAFHRAFATVPKDLKYTESHEWVKVDGNSATIGITDHAQKHLGDVVYVEFPEVGSSVEQFGSFGAVESVKASSDINSPVSGKVVEFNEELNNGPALINANCYEQGWILKVEMNKPDEVKALMDPDQYTKFCDEEDAKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="15406" PGL_stop="15707"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15406" e_stop="15498"/>
            <exon e_start="15532" e_stop="15707"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.957"/>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="15406" e_stop="15498" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="15499" i_stop="15531" i_length="33"/>
          </intron>
          <exon e_serial="2" e_score="0.932">
            <gDNA_exon_boundary e_start="15532" e_stop="15707" e_length="176"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15406" stop="15498"/>
              <exon start="15532" stop="15707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E618615" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAATGCAATGCCAGAAGAGATGAAAAACTTGAATTTAACCTAGATGAAGTTCAACATCCAAAAACACTGAATTATTTGCAAAGAAAGAGAAG : ACCAAATAGCACTACTTAGTATCCAGCTTCCGGGGCTTAGGAATAAAGCCTCTTTATGCATTGTGAAAAAATCCTGCAGGGAATTGTGTTCTTGCTCAACTTTGGTGAGGTTTCAAATCAGTGCTTCGCGTCTTCCTCGTCACAAAACTTGGTATACTGGTCAGGGTCCATCAATG</gDNA_template>
            <first_frame> *  M  Q  C  Q  K  R  *  K  T  *  I  *  P  R  *  S  S  T  S  K  N  T  E  L  F  A  K  K  E  K  :  T  K  *  H  Y  L  V  S  S  F  R  G  L  G  I  K  P  L  Y  A  L  *  K  N  P  A  G  N  C  V  L  A  Q  L  W  *  G  F  K  S  V  L  R  V  F  L  V  T  K  L  G  I  L  V  R  V  H  Q   </first_frame>
            <second_frame>  K  C  N  A  R  R  D  E  K  L  E  F  N  L  D  E  V  Q  H  P  K  T  L  N  Y  L  Q  R  K  R  R :   P  N  S  T  T  *  Y  P  A  S  G  A  *  E  *  S  L  F  M  H  C  E  K  I  L  Q  G  I  V  F  L  L  N  F  G  E  V  S  N  Q  C  F  A  S  S  S  S  Q  N  L  V  Y  W  S  G  S  I  N  </second_frame>
            <third_frame>   N  A  M  P  E  E  M  K  N  L  N  L  T  *  M  K  F  N  I  Q  K  H  *  I  I  C  K  E  R  E   : D  Q  I  A  L  L  S  I  Q  L  P  G  L  R  N  K  A  S  L  C  I  V  K  K  S  C  R  E  L  C  S  C  S  T  L  V  R  F  Q  I  S  A  S  R  L  P  R  H  K  T  W  Y  T  G  Q  G  P  S  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15477" stop="15498"/>
                    <exon start="15532" stop="15707"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IICKEREDQIALLSIQLPGLRNKASLCIVKKSCRELCSCSTLVRFQISASRLPRHKTWYTGQGPSM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="28200" PGL_stop="21847"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28200" e_stop="28165"/>
            <exon e_start="27450" e_stop="27266"/>
            <exon e_start="27188" e_stop="26956"/>
            <exon e_start="26745" e_stop="26496"/>
            <exon e_start="26081" e_stop="25936"/>
            <exon e_start="25753" e_stop="25548"/>
            <exon e_start="25302" e_stop="25178"/>
            <exon e_start="24863" e_stop="24176"/>
            <exon e_start="21865" e_stop="21847"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.789" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.858" acc_prob="0.723" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.889" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.068" acc_prob="0.708" e_score="1.000"/>
          <exon-only e_score="0.579"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28200" e_stop="28165" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="27450" e_stop="27266" e_length="185"/>
          </exon>
          <intron i_serial="2" don_prob="0.789" acc_prob="1.000">
            <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27188" e_stop="26956" e_length="233"/>
          </exon>
          <intron i_serial="3" don_prob="0.858" acc_prob="0.723">
            <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26745" e_stop="26496" e_length="250"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26495" i_stop="26082" i_length="414"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26081" e_stop="25936" e_length="146"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25935" i_stop="25754" i_length="182"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25753" e_stop="25548" e_length="206"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.889">
            <gDNA_intron_boundary i_start="25547" i_stop="25303" i_length="245"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="25302" e_stop="25178" e_length="125"/>
          </exon>
          <intron i_serial="7" don_prob="0.987" acc_prob="0.980">
            <gDNA_intron_boundary i_start="25177" i_stop="24864" i_length="314"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="24863" e_stop="24176" e_length="688"/>
          </exon>
          <intron i_serial="8" don_prob="0.068" acc_prob="0.708">
            <gDNA_intron_boundary i_start="24175" i_stop="21866" i_length="2310"/>
          </intron>
          <exon e_serial="9" e_score="0.579">
            <gDNA_exon_boundary e_start="21865" e_stop="21847" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28200" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28197" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28187" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26496"/>
              <exon start="26081" stop="25936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28186" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26547" stop="26496"/>
              <exon start="26081" stop="25936"/>
              <exon start="25753" stop="25548"/>
              <exon start="25302" stop="25178"/>
              <exon start="24863" stop="24580"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26546" stop="26496"/>
              <exon start="26081" stop="25936"/>
              <exon start="25753" stop="25548"/>
              <exon start="25302" stop="25178"/>
              <exon start="24863" stop="24753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25260" stop="25178"/>
              <exon start="24863" stop="24176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25208" stop="25178"/>
              <exon start="24863" stop="24176"/>
              <exon start="21865" stop="21847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541467" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAACACAAAGTTGAGGTCCTGGCCTTATCTTCAT : GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT : GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTG : ATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAA : GTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAG : GAAAATAAGTCCTACATGGCGCTAAAGATGTTCAATGAGATGAAAGCTCAGAAATGTAAACCTAATATCTGTACCTACACAGCTCTTGTAAATGCATTTGCGAGAAGTGGCCTATGTGAAAAGGCTGAAGAAGTCTTTGAAGAGCTACAAGAAGCTGGGTTTGAGCCTGATGTTTACACCTATAATGCCTTGATGGAAGCTTACAG : TCGTGCAGGCTACCCTCAGGGTGCTGCAGAGATCTTTTCTCTCATGCAGCATATGGGCTGTGAACCAGACACAGCTTCATACAATATCATGGTGGATGCCTATGGAAGAGCTGGTCTTCATGAAG : ATGCACAAACTGTGTTTGATGAGATGACGCGGCTGGGGATAGCTCCTACGATGAAATCCTACATGTTACTCATATCAGCCTACTCTAGAAACAGTAACGTGTCAAAATGTGAAGAAATCGTGAATCAGATGCAGAAATCAGGAGTGAAACTAGATACCTTTCTTCTTAACAGCATGCTCAACTTGTATGGTCGTCTTGGCCAGTTTGCTAAAATGGAAGAACTCTTGACTGTCATAGAAGCTGGACCATACGTAGCCGATATCAGCACCTACAATATCTTGATCAATGCATATGGACGTTCAGGATTTATCGTAAAAATGGAAGAAGTTTTCCAATCACTTCCTTCTAAGAACCTGCAGCCAGATGTGGTTACATGGACTTCCCGTCTTGGAGCATACTCCAAAAAGAAACAGTACCAAAGATGCTTAGAAATCTTCGAGGAAATGATCGATGAAGGTTGCTATCCAGATGGCGGAACAGCCAAAGTGCTCCTTTCGTCTTGTTCAAGTGAAGATCAGATTGAACAAGTTACAACAGTCATTAGATCAATGCACAAGAATGTGAAGACAGTAGAGTTAGTTTGACATGGCTTGTACAGCTTTCATGACATTCCCATATTTGATGTGAAAGTTAGAACATGGACATACCGGCAAAATCGAAAGTAAAAATTTCAACTTAAAATCCAACT : AAAATCAACAAGCAAGAAG</gDNA_template>
            <first_frame> K  N  T  K  L  R  S  W  P  Y  L  H  :  V  G  L  *  M  S  A  E  S  Y  P  F  *  T  K  N  Q  *  R  R  I  Q  M  E  S  K  C  L  Q  *  S  S  C  *  E  V  E  A  R  *  H  F  H  *  *  T  R  Q  I  *  T  I  *  S  Q  K  S  F  T  E  K  M :   W  F  F  K  G  Q  R  M  E  I  W  I  W  F  C  *  W  Y  I  P  S  S  K  P  N  C  S  A  N  S  N  F  Y  K  D  G  K  R  S  R  E  D  L  V  F  L  G  Y  S  T  S  H  Q  *  H  L  G  *  S  N  Q  C  S  S  S  T  S  T  Q  Q  A  M  G  S  D  H  T   : D  V  *  M  D  T  V  Q  E  F  L  S  G  R  C  D  L  L  Q  F  A  H  R  S  L  W  A  E  F  T  C  *  E  G  R  I  Y  L  P  G  T  C  *  C  S  M  C  P  D  *  R  Y  L  C  T  S  P  E  I  L  F  E  M  *  D  D  R  K  G  *  S  C  L  L  *  D  A  E  E  W  P  S  F  K :   C  S  C  I  *  C  L  Y  *  W  V  N  E  G  K  K  F  A  K  S  I  G  N  L  *  *  D  E  A  *  K  L  P  T  I  Y  *  Y  L  Y  N  A  D  Q  L  I  W  E   : G  K  *  V  L  H  G  A  K  D  V  Q  *  D  E  S  S  E  M  *  T  *  Y  L  Y  L  H  S  S  C  K  C  I  C  E  K  W  P  M  *  K  G  *  R  S  L  *  R  A  T  R  S  W  V  *  A  *  C  L  H  L  *  C  L  D  G  S  L  Q  :  S  C  R  L  P  S  G  C  C  R  D  L  F  S  H  A  A  Y  G  L  *  T  R  H  S  F  I  Q  Y  H  G  G  C  L  W  K  S  W  S  S  *  R :   C  T  N  C  V  *  *  D  D  A  A  G  D  S  S  Y  D  E  I  L  H  V  T  H  I  S  L  L  *  K  Q  *  R  V  K  M  *  R  N  R  E  S  D  A  E  I  R  S  E  T  R  Y  L  S  S  *  Q  H  A  Q  L  V  W  S  S  W  P  V  C  *  N  G  R  T  L  D  C  H  R  S  W  T  I  R  S  R  Y  Q  H  L  Q  Y  L  D  Q  C  I  W  T  F  R  I  Y  R  K  N  G  R  S  F  P  I  T  S  F  *  E  P  A  A  R  C  G  Y  M  D  F  P  S  W  S  I  L  Q  K  E  T  V  P  K  M  L  R  N  L  R  G  N  D  R  *  R  L  L  S  R  W  R  N  S  Q  S  A  P  F  V  L  F  K  *  R  S  D  *  T  S  Y  N  S  H  *  I  N  A  Q  E  C  E  D  S  R  V  S  L  T  W  L  V  Q  L  S  *  H  S  H  I  *  C  E  S  *  N  M  D  I  P  A  K  S  K  V  K  I  S  T  *  N  P  T  :  K  I  N  K  Q  E  </first_frame>
            <second_frame>  R  T  Q  S  *  G  P  G  L  I  F  M :   L  V  S  K  C  P  L  N  H  I  L  F  E  P  R  I  S  R  G  G  F  R  W  K  A  S  A  S  N  E  V  P  V  E  K  W  K  Q  D  S  I  F  I  D  R  R  G  R  F  R  Q  F  D  H  K  K  V  S  R  K  R   : C  G  S  L  R  G  R  G  W  K  Y  G  S  G  F  V  D  G  I  F  P  V  L  S  P  I  A  Q  Q  I  L  T  F  I  K  T  E  K  D  P  E  R  I  W  S  S  L  D  T  L  R  P  T  N  N  T  W  D  D  L  I  N  V  A  V  Q  L  R  L  N  K  Q  W  D  L  I  I  L  :  M  C  E  W  I  L  C  R  S  S  F  Q  A  D  V  I  C  Y  N  L  L  I  E  A  Y  G  Q  S  S  L  V  K  K  A  E  S  T  Y  L  A  L  V  D  A  R  C  V  P  T  E  D  T  Y  A  L  L  L  K  S  Y  S  K  C  R  M  I  E  K  A  E  A  V  F  S  E  M  R  K  N  G  L  P  S   : S  A  L  V  Y  N  A  Y  I  D  G  L  M  K  G  R  N  S  Q  K  A  L  A  I  F  D  R  M  K  R  E  S  C  Q  P  S  T  D  T  Y  T  M  L  I  N  L  Y  G  K  :  E  N  K  S  Y  M  A  L  K  M  F  N  E  M  K  A  Q  K  C  K  P  N  I  C  T  Y  T  A  L  V  N  A  F  A  R  S  G  L  C  E  K  A  E  E  V  F  E  E  L  Q  E  A  G  F  E  P  D  V  Y  T  Y  N  A  L  M  E  A  Y  S :   R  A  G  Y  P  Q  G  A  A  E  I  F  S  L  M  Q  H  M  G  C  E  P  D  T  A  S  Y  N  I  M  V  D  A  Y  G  R  A  G  L  H  E   : D  A  Q  T  V  F  D  E  M  T  R  L  G  I  A  P  T  M  K  S  Y  M  L  L  I  S  A  Y  S  R  N  S  N  V  S  K  C  E  E  I  V  N  Q  M  Q  K  S  G  V  K  L  D  T  F  L  L  N  S  M  L  N  L  Y  G  R  L  G  Q  F  A  K  M  E  E  L  L  T  V  I  E  A  G  P  Y  V  A  D  I  S  T  Y  N  I  L  I  N  A  Y  G  R  S  G  F  I  V  K  M  E  E  V  F  Q  S  L  P  S  K  N  L  Q  P  D  V  V  T  W  T  S  R  L  G  A  Y  S  K  K  K  Q  Y  Q  R  C  L  E  I  F  E  E  M  I  D  E  G  C  Y  P  D  G  G  T  A  K  V  L  L  S  S  C  S  S  E  D  Q  I  E  Q  V  T  T  V  I  R  S  M  H  K  N  V  K  T  V  E  L  V  *  H  G  L  Y  S  F  H  D  I  P  I  F  D  V  K  V  R  T  W  T  Y  R  Q  N  R  K  *  K  F  Q  L  K  I  Q  L :   K  S  T  S  K  K </second_frame>
            <third_frame>   E  H  K  V  E  V  L  A  L  S  S   : C  W  S  L  N  V  R  *  I  I  S  F  L  N  Q  E  S  V  E  A  D  S  D  G  K  Q  V  P  P  M  K  F  L  L  R  S  G  S  K  I  A  F  S  L  I  D  A  A  D  L  D  N  L  I  T  K  K  F  H  G  K  D  :  V  V  L  *  G  A  E  D  G  N  M  D  L  V  L  L  M  V  Y  S  Q  F  *  A  Q  L  L  S  K  F  *  L  L  *  R  R  K  K  I  Q  R  G  F  G  L  P  W  I  L  Y  V  P  P  I  T  L  G  M  I  *  S  M  *  Q  F  N  F  D  S  T  S  N  G  I  *  S  Y  * :   C  V  N  G  Y  C  A  G  V  P  F  R  Q  M  *  F  A  T  I  C  S  *  K  L  M  G  R  V  H  L  L  R  R  Q  N  L  L  T  W  H  L  L  M  L  D  V  S  R  L  K  I  L  M  H  F  S  *  N  L  I  R  N  V  G  *  *  K  R  L  K  L  S  S  L  R  C  G  R  M  A  F  L  Q  :  V  L  L  Y  I  M  L  I  L  M  G  *  *  R  E  E  I  R  K  K  H  W  Q  S  L  I  G  *  S  V  K  A  A  N  H  L  L  I  L  I  Q  C  *  S  T  Y  M  G  R :   K  I  S  P  T  W  R  *  R  C  S  M  R  *  K  L  R  N  V  N  L  I  S  V  P  T  Q  L  L  *  M  H  L  R  E  V  A  Y  V  K  R  L  K  K  S  L  K  S  Y  K  K  L  G  L  S  L  M  F  T  P  I  M  P  *  W  K  L  T   : V  V  Q  A  T  L  R  V  L  Q  R  S  F  L  S  C  S  I  W  A  V  N  Q  T  Q  L  H  T  I  S  W  W  M  P  M  E  E  L  V  F  M  K  :  M  H  K  L  C  L  M  R  *  R  G  W  G  *  L  L  R  *  N  P  T  C  Y  S  Y  Q  P  T  L  E  T  V  T  C  Q  N  V  K  K  S  *  I  R  C  R  N  Q  E  *  N  *  I  P  F  F  L  T  A  C  S  T  C  M  V  V  L  A  S  L  L  K  W  K  N  S  *  L  S  *  K  L  D  H  T  *  P  I  S  A  P  T  I  S  *  S  M  H  M  D  V  Q  D  L  S  *  K  W  K  K  F  S  N  H  F  L  L  R  T  C  S  Q  M  W  L  H  G  L  P  V  L  E  H  T  P  K  R  N  S  T  K  D  A  *  K  S  S  R  K  *  S  M  K  V  A  I  Q  M  A  E  Q  P  K  C  S  F  R  L  V  Q  V  K  I  R  L  N  K  L  Q  Q  S  L  D  Q  C  T  R  M  *  R  Q  *  S  *  F  D  M  A  C  T  A  F  M  T  F  P  Y  L  M  *  K  L  E  H  G  H  T  G  K  I  E  S  K  N  F  N  L  K  S  N   : *  N  Q  Q  A  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28184" stop="28165"/>
                    <exon start="27450" stop="27266"/>
                    <exon start="27188" stop="26956"/>
                    <exon start="26745" stop="26496"/>
                    <exon start="26081" stop="25936"/>
                    <exon start="25753" stop="25548"/>
                    <exon start="25302" stop="25178"/>
                    <exon start="24863" stop="24280"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1746</number_coding_nucleotides>
                  <number_encoded_amino_acids>582</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GPGLIFMLVSKCPLNHILFEPRISRGGFRWKASASNEVPVEKWKQDSIFIDRRGRFRQFDHKKVSRKRCGSLRGRGWKYGSGFVDGIFPVLSPIAQQILTFIKTEKDPERIWSSLDTLRPTNNTWDDLINVAVQLRLNKQWDLIILMCEWILCRSSFQADVICYNLLIEAYGQSSLVKKAESTYLALVDARCVPTEDTYALLLKSYSKCRMIEKAEAVFSEMRKNGLPSSALVYNAYIDGLMKGRNSQKALAIFDRMKRESCQPSTDTYTMLINLYGKENKSYMALKMFNEMKAQKCKPNICTYTALVNAFARSGLCEKAEEVFEELQEAGFEPDVYTYNALMEAYSRAGYPQGAAEIFSLMQHMGCEPDTASYNIMVDAYGRAGLHEDAQTVFDEMTRLGIAPTMKSYMLLISAYSRNSNVSKCEEIVNQMQKSGVKLDTFLLNSMLNLYGRLGQFAKMEELLTVIEAGPYVADISTYNILINAYGRSGFIVKMEEVFQSLPSKNLQPDVVTWTSRLGAYSKKKQYQRCLEIFEEMIDEGCYPDGGTAKVLLSSCSSEDQIEQVTTVIRSMHKNVKTVELV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="28200" e_stop="28165"/>
            <exon e_start="27450" e_stop="27266"/>
            <exon e_start="27188" e_stop="26956"/>
            <exon e_start="26745" e_stop="26496"/>
            <exon e_start="26091" e_stop="25936"/>
            <exon e_start="25753" e_stop="25733"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.789" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.858" acc_prob="0.723" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28200" e_stop="28165" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28164" i_stop="27451" i_length="714"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="27450" e_stop="27266" e_length="185"/>
          </exon>
          <intron i_serial="2" don_prob="0.789" acc_prob="1.000">
            <gDNA_intron_boundary i_start="27265" i_stop="27189" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27188" e_stop="26956" e_length="233"/>
          </exon>
          <intron i_serial="3" don_prob="0.858" acc_prob="0.723">
            <gDNA_intron_boundary i_start="26955" i_stop="26746" i_length="210"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26745" e_stop="26496" e_length="250"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26495" i_stop="26092" i_length="404"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="26091" e_stop="25936" e_length="156"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25935" i_stop="25754" i_length="182"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25753" e_stop="25733" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28200" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28197" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323570" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28186" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28184" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26496"/>
              <exon start="26091" stop="25936"/>
              <exon start="25753" stop="25733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E739007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28183" stop="28165"/>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26496"/>
              <exon start="26091" stop="25940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27450" stop="27266"/>
              <exon start="27188" stop="26956"/>
              <exon start="26745" stop="26606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364791" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAACACAAAGTTGAGGTCCTGGCCTTATCTTCAT : GTTGGTCTCTAAATGTCCGCTGAATCATATCCTTTTTGAACCAAGAATCAGTAGAGGCGGATTCAGATGGAAAGCAAGTGCCTCCAATGAAGTTCCTGTTGAGAAGTGGAAGCAAGATAGCATTTTCATTGATAGACGCGGCAGATTTAGACAATTTGATCACAAAAAAGTTTCACGGAAAAGAT : GTGGTTCTTTAAGGGGCAGAGGATGGAAATATGGATCTGGTTTTGTTGATGGTATATTCCCAGTTCTAAGCCCAATTGCTCAGCAAATTCTAACTTTTATAAAGACGGAAAAAGATCCAGAGAGGATTTGGTCTTCCTTGGATACTCTACGTCCCACCAATAACACTTGGGATGATCTAATCAATGTAGCAGTTCAACTTCGACTCAACAAGCAATGGGATCTGATCATACTG : ATGTGTGAATGGATACTGTGCAGGAGTTCCTTTCAGGCAGATGTGATTTGCTACAATTTGCTCATAGAAGCTTATGGGCAGAGTTCACTTGTTAAGAAGGCAGAATCTACTTACCTGGCACTTGTTGATGCTCGATGTGTCCCGACTGAAGATACTTATGCACTTCTCCTGAAATCTTATTCGAAATGTAGGATGATAGAAAAGGCTGAAGCTGTCTTCTCTGAGATGCGGAAGAATGGCCTTCCTTCAA : CCATCTGCAGGTGCTCTTGTATATAATGCTTATATTGATGGGTTAATGAAGGGAAGAAATTCGCAAAAAGCATTGGCAATCTTTGATAGGATGAAGCGTGAAAGCTGCCAACCATCTACTGATACTTATACAATGCTGATCAACTTATATGGGAAG : GAAAATAAGTCCTACATGGCG</gDNA_template>
            <first_frame> K  N  T  K  L  R  S  W  P  Y  L  H  :  V  G  L  *  M  S  A  E  S  Y  P  F  *  T  K  N  Q  *  R  R  I  Q  M  E  S  K  C  L  Q  *  S  S  C  *  E  V  E  A  R  *  H  F  H  *  *  T  R  Q  I  *  T  I  *  S  Q  K  S  F  T  E  K  M :   W  F  F  K  G  Q  R  M  E  I  W  I  W  F  C  *  W  Y  I  P  S  S  K  P  N  C  S  A  N  S  N  F  Y  K  D  G  K  R  S  R  E  D  L  V  F  L  G  Y  S  T  S  H  Q  *  H  L  G  *  S  N  Q  C  S  S  S  T  S  T  Q  Q  A  M  G  S  D  H  T   : D  V  *  M  D  T  V  Q  E  F  L  S  G  R  C  D  L  L  Q  F  A  H  R  S  L  W  A  E  F  T  C  *  E  G  R  I  Y  L  P  G  T  C  *  C  S  M  C  P  D  *  R  Y  L  C  T  S  P  E  I  L  F  E  M  *  D  D  R  K  G  *  S  C  L  L  *  D  A  E  E  W  P  S  F  N :   H  L  Q  V  L  L  Y  I  M  L  I  L  M  G  *  *  R  E  E  I  R  K  K  H  W  Q  S  L  I  G  *  S  V  K  A  A  N  H  L  L  I  L  I  Q  C  *  S  T  Y  M  G  R :   K  I  S  P  T  W   </first_frame>
            <second_frame>  R  T  Q  S  *  G  P  G  L  I  F  M :   L  V  S  K  C  P  L  N  H  I  L  F  E  P  R  I  S  R  G  G  F  R  W  K  A  S  A  S  N  E  V  P  V  E  K  W  K  Q  D  S  I  F  I  D  R  R  G  R  F  R  Q  F  D  H  K  K  V  S  R  K  R   : C  G  S  L  R  G  R  G  W  K  Y  G  S  G  F  V  D  G  I  F  P  V  L  S  P  I  A  Q  Q  I  L  T  F  I  K  T  E  K  D  P  E  R  I  W  S  S  L  D  T  L  R  P  T  N  N  T  W  D  D  L  I  N  V  A  V  Q  L  R  L  N  K  Q  W  D  L  I  I  L  :  M  C  E  W  I  L  C  R  S  S  F  Q  A  D  V  I  C  Y  N  L  L  I  E  A  Y  G  Q  S  S  L  V  K  K  A  E  S  T  Y  L  A  L  V  D  A  R  C  V  P  T  E  D  T  Y  A  L  L  L  K  S  Y  S  K  C  R  M  I  E  K  A  E  A  V  F  S  E  M  R  K  N  G  L  P  S   : T  I  C  R  C  S  C  I  *  C  L  Y  *  W  V  N  E  G  K  K  F  A  K  S  I  G  N  L  *  *  D  E  A  *  K  L  P  T  I  Y  *  Y  L  Y  N  A  D  Q  L  I  W  E   : G  K  *  V  L  H  G  </second_frame>
            <third_frame>   E  H  K  V  E  V  L  A  L  S  S   : C  W  S  L  N  V  R  *  I  I  S  F  L  N  Q  E  S  V  E  A  D  S  D  G  K  Q  V  P  P  M  K  F  L  L  R  S  G  S  K  I  A  F  S  L  I  D  A  A  D  L  D  N  L  I  T  K  K  F  H  G  K  D  :  V  V  L  *  G  A  E  D  G  N  M  D  L  V  L  L  M  V  Y  S  Q  F  *  A  Q  L  L  S  K  F  *  L  L  *  R  R  K  K  I  Q  R  G  F  G  L  P  W  I  L  Y  V  P  P  I  T  L  G  M  I  *  S  M  *  Q  F  N  F  D  S  T  S  N  G  I  *  S  Y  * :   C  V  N  G  Y  C  A  G  V  P  F  R  Q  M  *  F  A  T  I  C  S  *  K  L  M  G  R  V  H  L  L  R  R  Q  N  L  L  T  W  H  L  L  M  L  D  V  S  R  L  K  I  L  M  H  F  S  *  N  L  I  R  N  V  G  *  *  K  R  L  K  L  S  S  L  R  C  G  R  M  A  F  L  Q  :  P  S  A  G  A  L  V  Y  N  A  Y  I  D  G  L  M  K  G  R  N  S  Q  K  A  L  A  I  F  D  R  M  K  R  E  S  C  Q  P  S  T  D  T  Y  T  M  L  I  N  L  Y  G  K  :  E  N  K  S  Y  M  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28184" stop="28165"/>
                    <exon start="27450" stop="27266"/>
                    <exon start="27188" stop="26956"/>
                    <exon start="26745" stop="26496"/>
                    <exon start="26091" stop="26066"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>711</number_coding_nucleotides>
                  <number_encoded_amino_acids>237</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GPGLIFMLVSKCPLNHILFEPRISRGGFRWKASASNEVPVEKWKQDSIFIDRRGRFRQFDHKKVSRKRCGSLRGRGWKYGSGFVDGIFPVLSPIAQQILTFIKTEKDPERIWSSLDTLRPTNNTWDDLINVAVQLRLNKQWDLIILMCEWILCRSSFQADVICYNLLIEAYGQSSLVKKAESTYLALVDARCVPTEDTYALLLKSYSKCRMIEKAEAVFSEMRKNGLPSTICRCSCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="23706" e_stop="23240"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.916"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.916">
            <gDNA_exon_boundary e_start="23706" e_stop="23240" e_length="467"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23706" stop="23240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413693" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAACCCATAATATAGCATTCAAAAGCACAGTAAATTACAAGTGAGAAAAATCACAAGACAGACAACTACAGGAAAAATGCTACTGAACAGAAAAACAAGTGCAATGCACCAACCTATCACCAAGCTTAAACGCTTGGAAACGAGACAACCCCATGTACTGTTCAACCACATCTCCCAATCATGTAACAATAATCTTCTCGAAATGCATAATTAGTACACGAAACTGTTCATGTGCGCCTACGCCTTACAATCGACTCAATATAAGCAACTATGGGCAGATAAATATAGTACAATACATCAGTGTTAACAAAACACCCTGGGATTATTCATGCTATTGCTGTTTCCTTCTCCCTCCAAGTTGCGAGGACCTCATCAGTTCTAAACCGTTGAGTAAACGTTGATTCCTCCATTGGAGTTGATGCACCATTCGCATACTCTAGGAGACCGGTATAAGCAATCATTGCTC</gDNA_template>
            <first_frame> G  T  H  N  I  A  F  K  S  T  V  N  Y  K  *  E  K  S  Q  D  R  Q  L  Q  E  K  C  Y  *  T  E  K  Q  V  Q  C  T  N  L  S  P  S  L  N  A  W  K  R  D  N  P  M  Y  C  S  T  T  S  P  N  H  V  T  I  I  F  S  K  C  I  I  S  T  R  N  C  S  C  A  P  T  P  Y  N  R  L  N  I  S  N  Y  G  Q  I  N  I  V  Q  Y  I  S  V  N  K  T  P  W  D  Y  S  C  Y  C  C  F  L  L  P  P  S  C  E  D  L  I  S  S  K  P  L  S  K  R  *  F  L  H  W  S  *  C  T  I  R  I  L  *  E  T  G  I  S  N  H  C   </first_frame>
            <second_frame>  E  P  I  I  *  H  S  K  A  Q  *  I  T  S  E  K  N  H  K  T  D  N  Y  R  K  N  A  T  E  Q  K  N  K  C  N  A  P  T  Y  H  Q  A  *  T  L  G  N  E  T  T  P  C  T  V  Q  P  H  L  P  I  M  *  Q  *  S  S  R  N  A  *  L  V  H  E  T  V  H  V  R  L  R  L  T  I  D  S  I  *  A  T  M  G  R  *  I  *  Y  N  T  S  V  L  T  K  H  P  G  I  I  H  A  I  A  V  S  F  S  L  Q  V  A  R  T  S  S  V  L  N  R  *  V  N  V  D  S  S  I  G  V  D  A  P  F  A  Y  S  R  R  P  V  *  A  I  I  A  </second_frame>
            <third_frame>   N  P  *  Y  S  I  Q  K  H  S  K  L  Q  V  R  K  I  T  R  Q  T  T  T  G  K  M  L  L  N  R  K  T  S  A  M  H  Q  P  I  T  K  L  K  R  L  E  T  R  Q  P  H  V  L  F  N  H  I  S  Q  S  C  N  N  N  L  L  E  M  H  N  *  Y  T  K  L  F  M  C  A  Y  A  L  Q  S  T  Q  Y  K  Q  L  W  A  D  K  Y  S  T  I  H  Q  C  *  Q  N  T  L  G  L  F  M  L  L  L  F  P  S  P  S  K  L  R  G  P  H  Q  F  *  T  V  E  *  T  L  I  P  P  L  E  L  M  H  H  S  H  T  L  G  D  R  Y  K  Q  S  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23619" stop="23305"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TEKQVQCTNLSPSLNAWKRDNPMYCSTTSPNHVTIIFSKCIISTRNCSCAPTPYNRLNISNYGQINIVQYISVNKTPWDYSCYCCFLLPPSCEDLISSKPLSKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="22247" PGL_stop="23078"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22247" e_stop="23078"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="22247" e_stop="23078" e_length="832"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22247" stop="22963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705011" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22264" stop="22721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22273" stop="22978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22273" stop="22908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339251" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22274" stop="22898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22289" stop="22843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22289" stop="22760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22299" stop="22964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22329" stop="22879"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22329" stop="22839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22329" stop="22760"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413692" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22368" stop="23078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456258" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACAAGTCCAATTTTCTGGGAGAAGAGAGACCAAACCCTTATCGTCACTGCTCATTTGACTGCTAAACCCTAATCCTCCGACGGCGGCGGCAATGAAGGATAAGAAATTGATAGCCCTAGGGTTCGAGGGTTCCGCCAACAAAATTGGCGTCGGCGTAGTAGCAATCGACGGCACAATTCTTTCTAATCCACGACACACCTACATAACGCCACCAGGCCAAGGTTTTCTCCCCCGTGAAACCGCCCAGCATCACCACCAACACATCTTACCGTTAGTAAAATCCGCTCTAGAAACCGCCGGAGTAACTCCCGATGAAATTGACTGTATCTGCTACACAAAAGGCCCTGGGATGGGTGCTCCACTGCAGGTTTCGGCAGTGGTTGTACGTGTTCTATCTCAGCTATGGAAGAAACCTATTGTTGGGGTGAACCACTGTGTTGCGCACATTGAAATGGGTCGAATCGTAACCGGGGCGGTTGATCCGGTTGTGCTATACGTGAGTGGTGGAAATACTCAGGTTATTGCGTATAGTGAAGGACGGTATAGGATTTTTGGGGAGACGATTGATATTGCAGTGGGTAATTGTTTGGATAGGTTTGCTAGGGTTCTTACATTGTCTAATGATCCTAGCCCTGGGTACAACATTGAACAGCTTGCGAAAAAAGGTGAGAAGTTCATTGAACTTCCATATGTTGTGAAGGGAATGGACATTTCCTTCAGTGGAATACTGAGCTTCATTGAAGCCACAGCTGAGGAGAAGCTGAAAAATAACGAGTGCAGTCCGGCTGACCTTTGTTTCTCTTTACAGGAAACTCTGTTTGCAATGCTTGT</gDNA_template>
            <first_frame> N  K  S  N  F  L  G  E  E  R  P  N  P  Y  R  H  C  S  F  D  C  *  T  L  I  L  R  R  R  R  Q  *  R  I  R  N  *  *  P  *  G  S  R  V  P  P  T  K  L  A  S  A  *  *  Q  S  T  A  Q  F  F  L  I  H  D  T  P  T  *  R  H  Q  A  K  V  F  S  P  V  K  P  P  S  I  T  T  N  T  S  Y  R  *  *  N  P  L  *  K  P  P  E  *  L  P  M  K  L  T  V  S  A  T  Q  K  A  L  G  W  V  L  H  C  R  F  R  Q  W  L  Y  V  F  Y  L  S  Y  G  R  N  L  L  L  G  *  T  T  V  L  R  T  L  K  W  V  E  S  *  P  G  R  L  I  R  L  C  Y  T  *  V  V  E  I  L  R  L  L  R  I  V  K  D  G  I  G  F  L  G  R  R  L  I  L  Q  W  V  I  V  W  I  G  L  L  G  F  L  H  C  L  M  I  L  A  L  G  T  T  L  N  S  L  R  K  K  V  R  S  S  L  N  F  H  M  L  *  R  E  W  T  F  P  S  V  E  Y  *  A  S  L  K  P  Q  L  R  R  S  *  K  I  T  S  A  V  R  L  T  F  V  S  L  Y  R  K  L  C  L  Q  C  L  </first_frame>
            <second_frame>  T  S  P  I  F  W  E  K  R  D  Q  T  L  I  V  T  A  H  L  T  A  K  P  *  S  S  D  G  G  G  N  E  G  *  E  I  D  S  P  R  V  R  G  F  R  Q  Q  N  W  R  R  R  S  S  N  R  R  H  N  S  F  *  S  T  T  H  L  H  N  A  T  R  P  R  F  S  P  P  *  N  R  P  A  S  P  P  T  H  L  T  V  S  K  I  R  S  R  N  R  R  S  N  S  R  *  N  *  L  Y  L  L  H  K  R  P  W  D  G  C  S  T  A  G  F  G  S  G  C  T  C  S  I  S  A  M  E  E  T  Y  C  W  G  E  P  L  C  C  A  H  *  N  G  S  N  R  N  R  G  G  *  S  G  C  A  I  R  E  W  W  K  Y  S  G  Y  C  V  *  *  R  T  V  *  D  F  W  G  D  D  *  Y  C  S  G  *  L  F  G  *  V  C  *  G  S  Y  I  V  *  *  S  *  P  W  V  Q  H  *  T  A  C  E  K  R  *  E  V  H  *  T  S  I  C  C  E  G  N  G  H  F  L  Q  W  N  T  E  L  H  *  S  H  S  *  G  E  A  E  K  *  R  V  Q  S  G  *  P  L  F  L  F  T  G  N  S  V  C  N  A  C </second_frame>
            <third_frame>   Q  V  Q  F  S  G  R  R  E  T  K  P  L  S  S  L  L  I  *  L  L  N  P  N  P  P  T  A  A  A  M  K  D  K  K  L  I  A  L  G  F  E  G  S  A  N  K  I  G  V  G  V  V  A  I  D  G  T  I  L  S  N  P  R  H  T  Y  I  T  P  P  G  Q  G  F  L  P  R  E  T  A  Q  H  H  H  Q  H  I  L  P  L  V  K  S  A  L  E  T  A  G  V  T  P  D  E  I  D  C  I  C  Y  T  K  G  P  G  M  G  A  P  L  Q  V  S  A  V  V  V  R  V  L  S  Q  L  W  K  K  P  I  V  G  V  N  H  C  V  A  H  I  E  M  G  R  I  V  T  G  A  V  D  P  V  V  L  Y  V  S  G  G  N  T  Q  V  I  A  Y  S  E  G  R  Y  R  I  F  G  E  T  I  D  I  A  V  G  N  C  L  D  R  F  A  R  V  L  T  L  S  N  D  P  S  P  G  Y  N  I  E  Q  L  A  K  K  G  E  K  F  I  E  L  P  Y  V  V  K  G  M  D  I  S  F  S  G  I  L  S  F  I  E  A  T  A  E  E  K  L  K  N  N  E  C  S  P  A  D  L  C  F  S  L  Q  E  T  L  F  A  M  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22306" stop="23076"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLNPNPPTAAAMKDKKLIALGFEGSANKIGVGVVAIDGTILSNPRHTYITPPGQGFLPRETAQHHHQHILPLVKSALETAGVTPDEIDCICYTKGPGMGAPLQVSAVVVRVLSQLWKKPIVGVNHCVAHIEMGRIVTGAVDPVVLYVSGGNTQVIAYSEGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFIELPYVVKGMDISFSGILSFIEATAEEKLKNNECSPADLCFSLQETLFAML</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="23165" PGL_stop="23711"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23165" e_stop="23711"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23165" e_stop="23711" e_length="547"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23165" stop="23711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344674" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATGATGCAAATTATGTGCTCTGAGAGGGGCGGAAAGTTGTTTGCAACTGACGATAGATACTGCGTTGACAATGGAGCAATGATTGCTTATACCGGTCTCCTAGAGTATGCGAATGGTGCATCAACTCCAATGGAGGAATCAACGTTTACTCAACGGTTTAGAACTGATGAGGTCCTCGCAACTTGGAGGGAGAAGGAAACAGCAATAGCATGAATAATCCCAGGGTGTTTTGTTAACACTGATGTATTGTACTATATTTATCTGCCCATAGTTGCTTATATTGAGTCGATTGTAAGGCGTAGGCGCACATGAACAGTTTCGTGTACTAATTATGCATTTCGAGAAGATTATTGTTACATGATTGGGAGATGTGGTTGAACAGTACATGGGGTTGTCTCGTTTCCAAGCGTTTAAGCTTGGTGATAGGTTGGTGCATTGCACTTGTTTTTCTGTTCAGTAGCATTTTTCCTGTAGTTGTCTGTCTTGTGATTTTTCTCACTTGTAATTTACTGTGCTTTTGAATGCTATATTATGGGTTCCCTTTT</gDNA_template>
            <first_frame> R  *  C  K  L  C  A  L  R  G  A  E  S  C  L  Q  L  T  I  D  T  A  L  T  M  E  Q  *  L  L  I  P  V  S  *  S  M  R  M  V  H  Q  L  Q  W  R  N  Q  R  L  L  N  G  L  E  L  M  R  S  S  Q  L  G  G  R  R  K  Q  Q  *  H  E  *  S  Q  G  V  L  L  T  L  M  Y  C  T  I  F  I  C  P  *  L  L  I  L  S  R  L  *  G  V  G  A  H  E  Q  F  R  V  L  I  M  H  F  E  K  I  I  V  T  *  L  G  D  V  V  E  Q  Y  M  G  L  S  R  F  Q  A  F  K  L  G  D  R  L  V  H  C  T  C  F  S  V  Q  *  H  F  S  C  S  C  L  S  C  D  F  S  H  L  *  F  T  V  L  L  N  A  I  L  W  V  P  F  </first_frame>
            <second_frame>  D  D  A  N  Y  V  L  *  E  G  R  K  V  V  C  N  *  R  *  I  L  R  *  Q  W  S  N  D  C  L  Y  R  S  P  R  V  C  E  W  C  I  N  S  N  G  G  I  N  V  Y  S  T  V  *  N  *  *  G  P  R  N  L  E  G  E  G  N  S  N  S  M  N  N  P  R  V  F  C  *  H  *  C  I  V  L  Y  L  S  A  H  S  C  L  Y  *  V  D  C  K  A  *  A  H  M  N  S  F  V  Y  *  L  C  I  S  R  R  L  L  L  H  D  W  E  M  W  L  N  S  T  W  G  C  L  V  S  K  R  L  S  L  V  I  G  W  C  I  A  L  V  F  L  F  S  S  I  F  P  V  V  V  C  L  V  I  F  L  T  C  N  L  L  C  F  *  M  L  Y  Y  G  F  P  F </second_frame>
            <third_frame>   M  M  Q  I  M  C  S  E  R  G  G  K  L  F  A  T  D  D  R  Y  C  V  D  N  G  A  M  I  A  Y  T  G  L  L  E  Y  A  N  G  A  S  T  P  M  E  E  S  T  F  T  Q  R  F  R  T  D  E  V  L  A  T  W  R  E  K  E  T  A  I  A  *  I  I  P  G  C  F  V  N  T  D  V  L  Y  Y  I  Y  L  P  I  V  A  Y  I  E  S  I  V  R  R  R  R  T  *  T  V  S  C  T  N  Y  A  F  R  E  D  Y  C  Y  M  I  G  R  C  G  *  T  V  H  G  V  V  S  F  P  S  V  *  A  W  *  *  V  G  A  L  H  L  F  F  C  S  V  A  F  F  L  *  L  S  V  L  *  F  F  S  L  V  I  Y  C  A  F  E  C  Y  I  M  G  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23167" stop="23379"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MMQIMCSERGGKLFATDDRYCVDNGAMIAYTGLLEYANGASTPMEESTFTQRFRTDEVLATWREKETAIA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="24152" PGL_stop="24866"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24152" e_stop="24866"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="24152" e_stop="24866" e_length="715"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24152" stop="24866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24153" stop="24617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAAAACGAATCAAGCCAAGTACAGTTGGATTTTAAGTTGAAATTTTTACTTTCGATTTTGCCGGTATGTCCATGTTCTAACTTTCACATCAAATATGGGAATGTCATGAAAGCTGTACAAGCCATGTCAAACTAACTCTACTGTCTTCACATTCTTGTGCATTGATCTAATGACTGTTGTAACTTGTTCAATCTGATCTTCACTTGAACAAGACGAAAGGAGCACTTTGGCTGTTCCGCCATCTGGATAGCAACCTTCATCGATCATTTCCTCGAAGATTTCTAAGCATCTTTGGTACTGTTTCTTTTTGGAGTATGCTCCAAGACGGGAAGTCCATGTAACCACATCTGGCTGCAGGTTCTTAGAAGGAAGTGATTGGAAAACTTCTTCCATTTTTACGATAAATCCTGAACGTCCATATGCATTGATCAAGATATTGTAGGTGCTGATATCGGCTACGTATGGTCCAGCTTCTATGACAGTCAAGAGTTCTTCCATTTTAGCAAACTGGCCAAGACGACCATACAAGTTGAGCATGCTGTTAAGAAGAAAGGTATCTAGTTTCACTCCTGATTTCTGCATCTGATTCACGATTTCTTCACATTTTGACACGTTACTGTTTCTAGAGTAGGCTGATATGAGTAACATGTAGGATTTCATCGTAGGAGCTATCCCCAGCCGCGTCATCTCATCAAACACAGTTTGTGCATCTA</gDNA_template>
            <first_frame> *  K  T  N  Q  A  K  Y  S  W  I  L  S  *  N  F  Y  F  R  F  C  R  Y  V  H  V  L  T  F  T  S  N  M  G  M  S  *  K  L  Y  K  P  C  Q  T  N  S  T  V  F  T  F  L  C  I  D  L  M  T  V  V  T  C  S  I  *  S  S  L  E  Q  D  E  R  S  T  L  A  V  P  P  S  G  *  Q  P  S  S  I  I  S  S  K  I  S  K  H  L  W  Y  C  F  F  L  E  Y  A  P  R  R  E  V  H  V  T  T  S  G  C  R  F  L  E  G  S  D  W  K  T  S  S  I  F  T  I  N  P  E  R  P  Y  A  L  I  K  I  L  *  V  L  I  S  A  T  Y  G  P  A  S  M  T  V  K  S  S  S  I  L  A  N  W  P  R  R  P  Y  K  L  S  M  L  L  R  R  K  V  S  S  F  T  P  D  F  C  I  *  F  T  I  S  S  H  F  D  T  L  L  F  L  E  *  A  D  M  S  N  M  *  D  F  I  V  G  A  I  P  S  R  V  I  S  S  N  T  V  C  A  S  </first_frame>
            <second_frame>  K  K  R  I  K  P  S  T  V  G  F  *  V  E  I  F  T  F  D  F  A  G  M  S  M  F  *  L  S  H  Q  I  W  E  C  H  E  S  C  T  S  H  V  K  L  T  L  L  S  S  H  S  C  A  L  I  *  *  L  L  *  L  V  Q  S  D  L  H  L  N  K  T  K  G  A  L  W  L  F  R  H  L  D  S  N  L  H  R  S  F  P  R  R  F  L  S  I  F  G  T  V  S  F  W  S  M  L  Q  D  G  K  S  M  *  P  H  L  A  A  G  S  *  K  E  V  I  G  K  L  L  P  F  L  R  *  I  L  N  V  H  M  H  *  S  R  Y  C  R  C  *  Y  R  L  R  M  V  Q  L  L  *  Q  S  R  V  L  P  F  *  Q  T  G  Q  D  D  H  T  S  *  A  C  C  *  E  E  R  Y  L  V  S  L  L  I  S  A  S  D  S  R  F  L  H  I  L  T  R  Y  C  F  *  S  R  L  I  *  V  T  C  R  I  S  S  *  E  L  S  P  A  A  S  S  H  Q  T  Q  F  V  H  L </second_frame>
            <third_frame>   K  N  E  S  S  Q  V  Q  L  D  F  K  L  K  F  L  L  S  I  L  P  V  C  P  C  S  N  F  H  I  K  Y  G  N  V  M  K  A  V  Q  A  M  S  N  *  L  Y  C  L  H  I  L  V  H  *  S  N  D  C  C  N  L  F  N  L  I  F  T  *  T  R  R  K  E  H  F  G  C  S  A  I  W  I  A  T  F  I  D  H  F  L  E  D  F  *  A  S  L  V  L  F  L  F  G  V  C  S  K  T  G  S  P  C  N  H  I  W  L  Q  V  L  R  R  K  *  L  E  N  F  F  H  F  Y  D  K  S  *  T  S  I  C  I  D  Q  D  I  V  G  A  D  I  G  Y  V  W  S  S  F  Y  D  S  Q  E  F  F  H  F  S  K  L  A  K  T  T  I  Q  V  E  H  A  V  K  K  K  G  I  *  F  H  S  *  F  L  H  L  I  H  D  F  F  T  F  *  H  V  T  V  S  R  V  G  *  Y  E  *  H  V  G  F  H  R  R  S  Y  P  Q  P  R  H  L  I  K  H  S  L  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0101G09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="30664" PGL_stop="34052"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32986" e_stop="32990"/>
            <exon e_start="33235" e_stop="33454"/>
            <exon e_start="33584" e_stop="34052"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.413" acc_prob="0.994" e_score="0.600"/>
          <exon-intron don_prob="0.861" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.600">
            <gDNA_exon_boundary e_start="32986" e_stop="32990" e_length="5"/>
          </exon>
          <intron i_serial="1" don_prob="0.413" acc_prob="0.994">
            <gDNA_intron_boundary i_start="32991" i_stop="33234" i_length="244"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33235" e_stop="33454" e_length="220"/>
          </exon>
          <intron i_serial="2" don_prob="0.861" acc_prob="1.000">
            <gDNA_intron_boundary i_start="33455" i_stop="33583" i_length="129"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="33584" e_stop="34052" e_length="469"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32986" stop="32990"/>
              <exon start="33235" stop="33454"/>
              <exon start="33584" stop="34041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33625" stop="33880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308302" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCCA : AAAAGCAGAAGCGGTAAAGCAGGAAGATATGAGTGCTTACAACGCTTTTAAATCTTGTGCTCCAGTTGCATGGAGCCCTAATCTATACATAACCCTTGTAAGGGGTATACCAGGCACTAGGAGGCTCCATAGGCGTACCCTTGAGGCATTGCGTCTTGGCAAATGCAACCGGACTGTAATGCGATGGAACACACCTACTGTTAGGGGAATGATTCAGCAG : GTGAAAAGATTGGTTGTCGTTGAGACAGAAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCATGTTAGGAAC</gDNA_template>
            <first_frame> S  Q :   K  A  E  A  V  K  Q  E  D  M  S  A  Y  N  A  F  K  S  C  A  P  V  A  W  S  P  N  L  Y  I  T  L  V  R  G  I  P  G  T  R  R  L  H  R  R  T  L  E  A  L  R  L  G  K  C  N  R  T  V  M  R  W  N  T  P  T  V  R  G  M  I  Q  Q  :  V  K  R  L  V  V  V  E  T  E  E  M  Y  N  A  R  K  E  K  L  A  N  Q  K  A  L  R  P  P  L  V  V  N  H  H  A  A  P  A  G  D  P  V  Q  *  L  L  K  T  L  F  W  S  V  L  *  W  S  N  N  V  V  A  Y  S  D  L  L  L  *  A  C  G  M  K  L  H  *  T  F  V  L  R  W  L  L  L  L  F  W  L  *  T  M  P  L  E  Q  S  R  E  L  I  R  S  L  L  E  *  G  T  *  R  K  L  I  *  A  R  K  L  K  T  G  S  S  P  L  I  R  G  Y  Q  E  *  F  C  G  H  A  *  R  S  A  M  K  D  C  F  M  F  M  S  C  *  E  </first_frame>
            <second_frame>  P   : K  K  Q  K  R  *  S  R  K  I  *  V  L  T  T  L  L  N  L  V  L  Q  L  H  G  A  L  I  Y  T  *  P  L  *  G  V  Y  Q  A  L  G  G  S  I  G  V  P  L  R  H  C  V  L  A  N  A  T  G  L  *  C  D  G  T  H  L  L  L  G  E  *  F  S  R :   *  K  D  W  L  S  L  R  Q  K  R  C  T  M  H  V  R  R  N  *  L  I  R  K  L  Y  V  L  L  W  L  *  I  I  T  Q  P  L  Q  V  I  Q  F  S  N  C  *  K  L  F  S  G  Q  F  C  N  G  P  T  M  *  *  P  I  Q  T  F  C  F  K  H  V  V  *  N  C  I  E  P  L  Y  *  G  G  C  C  Y  C  F  G  Y  K  R  C  L  W  N  N  L  E  S  *  L  G  P  Y  W  N  K  E  L  E  E  S  *  Y  K  L  V  N  *  K  L  V  L  A  R  *  Y  E  A  T  R  N  D  S  V  V  M  L  K  E  V  Q  *  R  I  A  L  C  L  C  H  V  R  N </second_frame>
            <third_frame>   P  :  K  S  R  S  G  K  A  G  R  Y  E  C  L  Q  R  F  *  I  L  C  S  S  C  M  E  P  *  S  I  H  N  P  C  K  G  Y  T  R  H  *  E  A  P  *  A  Y  P  *  G  I  A  S  W  Q  M  Q  P  D  C  N  A  M  E  H  T  Y  C  *  G  N  D  S  A   : G  E  K  I  G  C  R  *  D  R  R  D  V  Q  C  T  *  G  E  I  S  *  S  E  S  S  T  S  S  F  G  C  K  S  S  R  S  P  C  R  *  S  S  S  V  T  V  E  N  S  F  L  V  S  F  V  M  V  Q  Q  C  S  S  L  F  R  P  F  A  L  S  M  W  Y  E  I  A  L  N  L  C  I  K  V  V  V  V  I  V  L  A  I  N  D  A  S  G  T  I  *  R  V  D  *  V  L  T  G  I  R  N  L  K  K  A  D  I  S  S  *  T  K  N  W  F  *  P  V  D  T  R  L  P  G  M  I  L  W  S  C  L  K  K  C  N  E  G  L  L  Y  V  Y  V  M  L  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32986" stop="32990"/>
                    <exon start="33235" stop="33454"/>
                    <exon start="33584" stop="33718"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQKAEAVKQEDMSAYNAFKSCAPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYNARKEKLANQKALRPPLVVNHHAAPAGDPVQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="30664" e_stop="30721"/>
            <exon e_start="33235" e_stop="33454"/>
            <exon e_start="33584" e_stop="34052"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="0.948"/>
          <exon-intron don_prob="0.861" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="30664" e_stop="30721" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="30722" i_stop="33234" i_length="2513"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33235" e_stop="33454" e_length="220"/>
          </exon>
          <intron i_serial="2" don_prob="0.861" acc_prob="1.000">
            <gDNA_intron_boundary i_start="33455" i_stop="33583" i_length="129"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="33584" e_stop="34052" e_length="469"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30664" stop="30721"/>
              <exon start="33235" stop="33454"/>
              <exon start="33584" stop="34034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33612" stop="34052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545248" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33625" stop="33880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308302" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGCTGGAAAAAAAACCCAGAGGAGCAGACTTCTCACTTCAGAGAGCAATTCGCCAA : AAAAGCAGAAGCGGTAAAGCAGGAAGATATGAGTGCTTACAACGCTTTTAAATCTTGTGCTCCAGTTGCATGGAGCCCTAATCTATACATAACCCTTGTAAGGGGTATACCAGGCACTAGGAGGCTCCATAGGCGTACCCTTGAGGCATTGCGTCTTGGCAAATGCAACCGGACTGTAATGCGATGGAACACACCTACTGTTAGGGGAATGATTCAGCAG : GTGAAAAGATTGGTTGTCGTTGAGACAGAAGAGATGTACAATGCACGTAAGGAGAAATTAGCTAATCAGAAAGCTCTACGTCCTCCTTTGGTTGTAAATCATCACGCAGCCCCTGCAGGTGATCCAGTTCAGTAACTGTTGAAAACTCTTTTCTGGTCAGTTTTGTAATGGTCCAACAATGTAGTAGCCTATTCAGACCTTTTGCTTTAAGCATGTGGTATGAAATTGCATTGAACCTTTGTATTAAGGTGGTTGTTGTTATTGTTTTGGCTATAAACGATGCCTCTGGAACAATCTAGAGAGTTGATTAGGTCCTTACTGGAATAAGGAACTTGAAGAAAGCTGATATAAGCTCGTAAACTAAAAACTGGTTCTAGCCCGTTGATACGAGGCTACCAGGAATGATTCTGTGGTCATGCTTAAAGAAGTGCAATGAAGGATTGCTTTATGTTTATGTCATGTTAGGAAC</gDNA_template>
            <first_frame> F  A  G  K  K  T  Q  R  S  R  L  L  T  S  E  S  N  S  P   : K  K  Q  K  R  *  S  R  K  I  *  V  L  T  T  L  L  N  L  V  L  Q  L  H  G  A  L  I  Y  T  *  P  L  *  G  V  Y  Q  A  L  G  G  S  I  G  V  P  L  R  H  C  V  L  A  N  A  T  G  L  *  C  D  G  T  H  L  L  L  G  E  *  F  S  R :   *  K  D  W  L  S  L  R  Q  K  R  C  T  M  H  V  R  R  N  *  L  I  R  K  L  Y  V  L  L  W  L  *  I  I  T  Q  P  L  Q  V  I  Q  F  S  N  C  *  K  L  F  S  G  Q  F  C  N  G  P  T  M  *  *  P  I  Q  T  F  C  F  K  H  V  V  *  N  C  I  E  P  L  Y  *  G  G  C  C  Y  C  F  G  Y  K  R  C  L  W  N  N  L  E  S  *  L  G  P  Y  W  N  K  E  L  E  E  S  *  Y  K  L  V  N  *  K  L  V  L  A  R  *  Y  E  A  T  R  N  D  S  V  V  M  L  K  E  V  Q  *  R  I  A  L  C  L  C  H  V  R  N </first_frame>
            <second_frame>  L  L  E  K  K  P  R  G  A  D  F  S  L  Q  R  A  I  R  Q  :  K  S  R  S  G  K  A  G  R  Y  E  C  L  Q  R  F  *  I  L  C  S  S  C  M  E  P  *  S  I  H  N  P  C  K  G  Y  T  R  H  *  E  A  P  *  A  Y  P  *  G  I  A  S  W  Q  M  Q  P  D  C  N  A  M  E  H  T  Y  C  *  G  N  D  S  A   : G  E  K  I  G  C  R  *  D  R  R  D  V  Q  C  T  *  G  E  I  S  *  S  E  S  S  T  S  S  F  G  C  K  S  S  R  S  P  C  R  *  S  S  S  V  T  V  E  N  S  F  L  V  S  F  V  M  V  Q  Q  C  S  S  L  F  R  P  F  A  L  S  M  W  Y  E  I  A  L  N  L  C  I  K  V  V  V  V  I  V  L  A  I  N  D  A  S  G  T  I  *  R  V  D  *  V  L  T  G  I  R  N  L  K  K  A  D  I  S  S  *  T  K  N  W  F  *  P  V  D  T  R  L  P  G  M  I  L  W  S  C  L  K  K  C  N  E  G  L  L  Y  V  Y  V  M  L  G   </second_frame>
            <third_frame>   C  W  K  K  N  P  E  E  Q  T  S  H  F  R  E  Q  F  A  K :   K  A  E  A  V  K  Q  E  D  M  S  A  Y  N  A  F  K  S  C  A  P  V  A  W  S  P  N  L  Y  I  T  L  V  R  G  I  P  G  T  R  R  L  H  R  R  T  L  E  A  L  R  L  G  K  C  N  R  T  V  M  R  W  N  T  P  T  V  R  G  M  I  Q  Q  :  V  K  R  L  V  V  V  E  T  E  E  M  Y  N  A  R  K  E  K  L  A  N  Q  K  A  L  R  P  P  L  V  V  N  H  H  A  A  P  A  G  D  P  V  Q  *  L  L  K  T  L  F  W  S  V  L  *  W  S  N  N  V  V  A  Y  S  D  L  L  L  *  A  C  G  M  K  L  H  *  T  F  V  L  R  W  L  L  L  L  F  W  L  *  T  M  P  L  E  Q  S  R  E  L  I  R  S  L  L  E  *  G  T  *  R  K  L  I  *  A  R  K  L  K  T  G  S  S  P  L  I  R  G  Y  Q  E  *  F  C  G  H  A  *  R  S  A  M  K  D  C  F  M  F  M  S  C  *  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30666" stop="30721"/>
                    <exon start="33235" stop="33454"/>
                    <exon start="33584" stop="33718"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CWKKNPEEQTSHFREQFAKKAEAVKQEDMSAYNAFKSCAPVAWSPNLYITLVRGIPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYNARKEKLANQKALRPPLVVNHHAAPAGDPVQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="41629" PGL_stop="42414"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41629" e_stop="42414"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="41629" e_stop="42414" e_length="786"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41629" stop="42387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E411002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41828" stop="42414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448719" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41828" stop="42318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422642" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41913" stop="42375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480083" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTGGACCCTGATATTAATTCTACAATTGTGTCTGAGCGCTTTGTGAACTCACCCTACAAGAAAAAAGGAATGCGTAAAGATGGTAGATTATTCAGAAGAGAGATAAGCGAAAATGAATCTAAGTTTCGTACAGGAATCATAAGAGAGTTTGATCATCAAGAGTCCACTGATGATGATGATGTATGCTTCCTTTCTATGCGTAAAGGAGCAAATGAAAAATGTGCTGACAGATTTCTTATCCCAACTGCTTCAAATGGGAACTCCGCCTATGCCGGAGATGTAGGTAGACAAATGGCTGAAGTTGGTAGTTATCCAATGAATGATTTTGATGGGTTGGTCCCTGGTACAGAGAACTTCAAGAGGCCTCTCTCCGGGGCTGATTGCACTGTGTACTCTCCAATGAAGAAAAGAACCCCAGGGTACTCCACCAAATTTCTTGCTGGAACAGAATTTCCTCAGTCAACAGAGGGACAAAATCTTGGTCAGTCTTGCTCTAAATTCCATGATGCAACAATTACAAGAGTCATGCCATATAAGGATGAGCTACCAAATTCTTGTTATGGACATACCGAGACATACGAAGTTGAACAGGGTTCAATCTTTGTGCGAGGGCCACCTTCTTCCAATGTGTATAGAGAGAATAACTTTGCATCTTCTAAAGGTATATCTTCTCCATATTCCCATCCTGAATTTACAAAGAGGGGCCTGGAATCAGCTTCTGAAGGTGGAAAAATGGTTCTGCTTTCGCAAGATGGGTTCAGCAATCCTCTTATAAATGTTGGAA</gDNA_template>
            <first_frame> I  W  T  L  I  L  I  L  Q  L  C  L  S  A  L  *  T  H  P  T  R  K  K  E  C  V  K  M  V  D  Y  S  E  E  R  *  A  K  M  N  L  S  F  V  Q  E  S  *  E  S  L  I  I  K  S  P  L  M  M  M  M  Y  A  S  F  L  C  V  K  E  Q  M  K  N  V  L  T  D  F  L  S  Q  L  L  Q  M  G  T  P  P  M  P  E  M  *  V  D  K  W  L  K  L  V  V  I  Q  *  M  I  L  M  G  W  S  L  V  Q  R  T  S  R  G  L  S  P  G  L  I  A  L  C  T  L  Q  *  R  K  E  P  Q  G  T  P  P  N  F  L  L  E  Q  N  F  L  S  Q  Q  R  D  K  I  L  V  S  L  A  L  N  S  M  M  Q  Q  L  Q  E  S  C  H  I  R  M  S  Y  Q  I  L  V  M  D  I  P  R  H  T  K  L  N  R  V  Q  S  L  C  E  G  H  L  L  P  M  C  I  E  R  I  T  L  H  L  L  K  V  Y  L  L  H  I  P  I  L  N  L  Q  R  G  A  W  N  Q  L  L  K  V  E  K  W  F  C  F  R  K  M  G  S  A  I  L  L  *  M  L  E </first_frame>
            <second_frame>  F  G  P  *  Y  *  F  Y  N  C  V  *  A  L  C  E  L  T  L  Q  E  K  R  N  A  *  R  W  *  I  I  Q  K  R  D  K  R  K  *  I  *  V  S  Y  R  N  H  K  R  V  *  S  S  R  V  H  *  *  *  *  C  M  L  P  F  Y  A  *  R  S  K  *  K  M  C  *  Q  I  S  Y  P  N  C  F  K  W  E  L  R  L  C  R  R  C  R  *  T  N  G  *  S  W  *  L  S  N  E  *  F  *  W  V  G  P  W  Y  R  E  L  Q  E  A  S  L  R  G  *  L  H  C  V  L  S  N  E  E  K  N  P  R  V  L  H  Q  I  S  C  W  N  R  I  S  S  V  N  R  G  T  K  S  W  S  V  L  L  *  I  P  *  C  N  N  Y  K  S  H  A  I  *  G  *  A  T  K  F  L  L  W  T  Y  R  D  I  R  S  *  T  G  F  N  L  C  A  R  A  T  F  F  Q  C  V  *  R  E  *  L  C  I  F  *  R  Y  I  F  S  I  F  P  S  *  I  Y  K  E  G  P  G  I  S  F  *  R  W  K  N  G  S  A  F  A  R  W  V  Q  Q  S  S  Y  K  C  W   </second_frame>
            <third_frame>   L  D  P  D  I  N  S  T  I  V  S  E  R  F  V  N  S  P  Y  K  K  K  G  M  R  K  D  G  R  L  F  R  R  E  I  S  E  N  E  S  K  F  R  T  G  I  I  R  E  F  D  H  Q  E  S  T  D  D  D  D  V  C  F  L  S  M  R  K  G  A  N  E  K  C  A  D  R  F  L  I  P  T  A  S  N  G  N  S  A  Y  A  G  D  V  G  R  Q  M  A  E  V  G  S  Y  P  M  N  D  F  D  G  L  V  P  G  T  E  N  F  K  R  P  L  S  G  A  D  C  T  V  Y  S  P  M  K  K  R  T  P  G  Y  S  T  K  F  L  A  G  T  E  F  P  Q  S  T  E  G  Q  N  L  G  Q  S  C  S  K  F  H  D  A  T  I  T  R  V  M  P  Y  K  D  E  L  P  N  S  C  Y  G  H  T  E  T  Y  E  V  E  Q  G  S  I  F  V  R  G  P  P  S  S  N  V  Y  R  E  N  N  F  A  S  S  K  G  I  S  S  P  Y  S  H  P  E  F  T  K  R  G  L  E  S  A  S  E  G  G  K  M  V  L  L  S  Q  D  G  F  S  N  P  L  I  N  V  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41631" stop="42413"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>783</number_coding_nucleotides>
                  <number_encoded_amino_acids>261</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDPDINSTIVSERFVNSPYKKKGMRKDGRLFRREISENESKFRTGIIREFDHQESTDDDDVCFLSMRKGANEKCADRFLIPTASNGNSAYAGDVGRQMAEVGSYPMNDFDGLVPGTENFKRPLSGADCTVYSPMKKRTPGYSTKFLAGTEFPQSTEGQNLGQSCSKFHDATITRVMPYKDELPNSCYGHTETYEVEQGSIFVRGPPSSNVYRENNFASSKGISSPYSHPEFTKRGLESASEGGKMVLLSQDGFSNPLINVG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="44922" PGL_stop="51352"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44922" e_stop="46416"/>
            <exon e_start="46859" e_stop="47008"/>
            <exon e_start="48058" e_stop="48192"/>
            <exon e_start="48685" e_stop="48879"/>
            <exon e_start="50840" e_stop="51352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.976" e_score="0.996"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="44922" e_stop="46416" e_length="1495"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.976">
            <gDNA_intron_boundary i_start="46417" i_stop="46858" i_length="442"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46859" e_stop="47008" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="47009" i_stop="48057" i_length="1049"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48058" e_stop="48192" e_length="135"/>
          </exon>
          <intron i_serial="3" don_prob="0.945" acc_prob="0.977">
            <gDNA_intron_boundary i_start="48193" i_stop="48684" i_length="492"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="48685" e_stop="48879" e_length="195"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960"/>
          </intron>
          <exon e_serial="5" e_score="0.930">
            <gDNA_exon_boundary e_start="50840" e_stop="51352" e_length="513"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44922" stop="45699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44939" stop="45712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44951" stop="45371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335456" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44974" stop="45698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44988" stop="45611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45666" stop="46373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480216" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46142" stop="46416"/>
              <exon start="46859" stop="47008"/>
              <exon start="48058" stop="48192"/>
              <exon start="48685" stop="48879"/>
              <exon start="50840" stop="50926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46304" stop="46416"/>
              <exon start="46859" stop="47008"/>
              <exon start="48058" stop="48192"/>
              <exon start="48685" stop="48879"/>
              <exon start="50840" stop="51163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46305" stop="46416"/>
              <exon start="46859" stop="47008"/>
              <exon start="48058" stop="48181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48718" stop="48879"/>
              <exon start="50840" stop="51352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371096" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGTCATTTTACAGTTATAACCTTTCTAACAGAATCTCAGTCACCCCAACACCCTCCTCCGTCCCAAACCTTCGGTGACATCTGAAGTCGCCACCGCCTACCGCCCGCCGTACCACATGCTTCGGAACCTCCGAACGCGGCGGCGTCCGCTTTACGGCGCGCACATTTGCGCCTTAGCGGCAGCGATTCTCCTCCTCCTCTCTGTTTCACTCCTCTACAGTCGCCTCAACTTCTTCCTCCAACCTAACAATCCCCATCCGCATCCCCTCCAATACGACACCATTTCACTGAACAACCCTCTCGTCGACGATTTAGCTGACGCTGATTACCGCTCCTCAGATGACCGCATTGACGAGCTCGACGTTGCTGACAGTAACAACAATAACGATGATGAGTTCCTCTTATCCAATGAATCCGAAGAGGACGATGAAGAAATCATCAATCAATACCCTAGGGTTTCGTCGACATATTTCTACGATCAGAGGCACGGAGTTGTACGGAGAGCGTTTAACAAACGATCAATTGAGGAATGGGAAGATTACGTTAATTTTGAATCGAGGATGAAGTTAGGATTAGGGTTTAAGAGTGATGAATCTAAGGCCGCGTTTGGATCGGATGATCTTCCAGTGGATGTGCAAATGAGGATGAAGTTGAGCGAAATTGAGAGTGTTGAAGATGCTTTGTTACTAAAAGGATCACCTTTGAGGGAAGGGTGGGGTGAGTGGTTTGAAAAGAAGAGTGATTTTTTGAGGCGTGACAGAATGTTCAAGTCAAATCTGGAGGCGTTAAATCCAAATAATAATCCCATGTTGCAGGATCCTGATGGAGCAGGGACTACTGGATTGACTAAAGGGGATAAGATTGTGTTAAAAGGGTTGATGAATGAGTTTAAGAAAGTTCCATTTCTGGTGAAAAAACCACTTTCAGTGTCTGAATTGACAAAATCTGAGTTGGTTAATGATGCTTTGGAGTTACAGAAGATGGCGGGATTGGCCAAAAATGATGTTTTCGAGTCAAAGGAGTTGAAATTCAATAGTGATTTGGTGAAAACTAATGATGAGGATGTGAATAGAGGGAAGAGAGTGAAGCGTAGAACTTTAAACGATGATGCTAGAATTGGAAAAAGAGTTGTTCATGATAGTGGTGGAGATTCAGCTCCTAGGAGTAAGGAAGATATAAGGAATGGTAATATGAAAGTTGTGGAAGATGATTCCCGAGGTGAAGTTTCTGGGCTAGTCTTTGCTGATGGGAAGAGATGGGGTTACTTTCCGGGCTTGCACCCCCGGTTGTCTTTCACTAACTTTATGGACTCATTTTTCAGGAAAGCAAAATGTACTATGAGAGTTTTCATGGTCTGGAATTCTCCAGCATGGATGTTTACGGCTCGGTATCAGAGGGGACTTGAGAGTGTACTTAACCGTCACCGGGATGCTTGTGTGGTGGTTTTCTCTGAGACAATCGAACTTAATTTCTTTAGTGGTTTTGTGAAGGATGG : CTTCAAAGTGGCTGTTGTGATGCCTAATCTTGATGAGCTCCTACTAGGCACACCAACACATGTATTTGCTTCTTTCTGGTATGAATGGAAGCAGACAAGACATTATCCTTTCCATTACAGTGAACTAGTCAGGCTGGCAGCTCTATACAA : ATATGGTGGAATCTATCTTGACTCAGACATCATAGTGTTGAATTCATTGTCTTCACTTAGTAATACTGTTGCTTTTGAGGATGACCGACGTGGAAAAACTTTGAATGGTGCTGTAATGGCTTTTAGAAAGCACAG : TCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAG : ATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACCTTGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</gDNA_template>
            <first_frame> L  S  F  Y  S  Y  N  L  S  N  R  I  S  V  T  P  T  P  S  S  V  P  N  L  R  *  H  L  K  S  P  P  P  T  A  R  R  T  T  C  F  G  T  S  E  R  G  G  V  R  F  T  A  R  T  F  A  P  *  R  Q  R  F  S  S  S  S  L  F  H  S  S  T  V  A  S  T  S  S  S  N  L  T  I  P  I  R  I  P  S  N  T  T  P  F  H  *  T  T  L  S  S  T  I  *  L  T  L  I  T  A  P  Q  M  T  A  L  T  S  S  T  L  L  T  V  T  T  I  T  M  M  S  S  S  Y  P  M  N  P  K  R  T  M  K  K  S  S  I  N  T  L  G  F  R  R  H  I  S  T  I  R  G  T  E  L  Y  G  E  R  L  T  N  D  Q  L  R  N  G  K  I  T  L  I  L  N  R  G  *  S  *  D  *  G  L  R  V  M  N  L  R  P  R  L  D  R  M  I  F  Q  W  M  C  K  *  G  *  S  *  A  K  L  R  V  L  K  M  L  C  Y  *  K  D  H  L  *  G  K  G  G  V  S  G  L  K  R  R  V  I  F  *  G  V  T  E  C  S  S  Q  I  W  R  R  *  I  Q  I  I  I  P  C  C  R  I  L  M  E  Q  G  L  L  D  *  L  K  G  I  R  L  C  *  K  G  *  *  M  S  L  R  K  F  H  F  W  *  K  N  H  F  Q  C  L  N  *  Q  N  L  S  W  L  M  M  L  W  S  Y  R  R  W  R  D  W  P  K  M  M  F  S  S  Q  R  S  *  N  S  I  V  I  W  *  K  L  M  M  R  M  *  I  E  G  R  E  *  S  V  E  L  *  T  M  M  L  E  L  E  K  E  L  F  M  I  V  V  E  I  Q  L  L  G  V  R  K  I  *  G  M  V  I  *  K  L  W  K  M  I  P  E  V  K  F  L  G  *  S  L  L  M  G  R  D  G  V  T  F  R  A  C  T  P  G  C  L  S  L  T  L  W  T  H  F  S  G  K  Q  N  V  L  *  E  F  S  W  S  G  I  L  Q  H  G  C  L  R  L  G  I  R  G  D  L  R  V  Y  L  T  V  T  G  M  L  V  W  W  F  S  L  R  Q  S  N  L  I  S  L  V  V  L  *  R  M   : A  S  K  W  L  L  *  C  L  I  L  M  S  S  Y  *  A  H  Q  H  M  Y  L  L  L  S  G  M  N  G  S  R  Q  D  I  I  L  S  I  T  V  N  *  S  G  W  Q  L  Y  T   : N  M  V  E  S  I  L  T  Q  T  S  *  C  *  I  H  C  L  H  L  V  I  L  L  L  L  R  M  T  D  V  E  K  L  *  M  V  L  *  W  L  L  E  S  T   : V  L  L  *  W  S  V  *  R  S  F  M  H  L  M  T  T  H  N  *  D  G  M  E  L  I  F  *  Q  E  L  L  V  T  F  P  S  M  V  I  F  P  V  E  R  G  R  S  N  F  N  P  R  L  F  S  S  P  S  V  I  T  I  L  P   : D  T  S  R  H  Q  Q  W  K  L  R  K  L  N  K  I  R  C  S  K  L  S  S  K  K  L  S  H  F  T  F  G  M  A  *  L  Q  L  W  F  Q  R  L  A  A  L  H  T  G  S  L  I  T  I  A  Y  V  A  L  T  H  C  E  T  P  L  K  Q  M  D  D  L  L  K  H  F  C  F  H  A  I  R  Y  T  S  Q  L  L  K  I  F  R  W  C  F  I  H  E  *  Y  I  N  F  C  C  T  K  Y  E  S  P  V  G  W  L  S  G  P  C  L  Y  *  L  L  *  I  P  S  R  D  E  L  R  G  P  A  F  C  S  *  V  L  T  V  Y  F  P  L  *  V  L  *  N  Y  L  *  S  L  A  T  G  Q  *  Y  I  *  M  M  F  L  Y  </first_frame>
            <second_frame>  C  H  F  T  V  I  T  F  L  T  E  S  Q  S  P  Q  H  P  P  P  S  Q  T  F  G  D  I  *  S  R  H  R  L  P  P  A  V  P  H  A  S  E  P  P  N  A  A  A  S  A  L  R  R  A  H  L  R  L  S  G  S  D  S  P  P  P  L  C  F  T  P  L  Q  S  P  Q  L  L  P  P  T  *  Q  S  P  S  A  S  P  P  I  R  H  H  F  T  E  Q  P  S  R  R  R  F  S  *  R  *  L  P  L  L  R  *  P  H  *  R  A  R  R  C  *  Q  *  Q  Q  *  R  *  *  V  P  L  I  Q  *  I  R  R  G  R  *  R  N  H  Q  S  I  P  *  G  F  V  D  I  F  L  R  S  E  A  R  S  C  T  E  S  V  *  Q  T  I  N  *  G  M  G  R  L  R  *  F  *  I  E  D  E  V  R  I  R  V  *  E  *  *  I  *  G  R  V  W  I  G  *  S  S  S  G  C  A  N  E  D  E  V  E  R  N  *  E  C  *  R  C  F  V  T  K  R  I  T  F  E  G  R  V  G  *  V  V  *  K  E  E  *  F  F  E  A  *  Q  N  V  Q  V  K  S  G  G  V  K  S  K  *  *  S  H  V  A  G  S  *  W  S  R  D  Y  W  I  D  *  R  G  *  D  C  V  K  R  V  D  E  *  V  *  E  S  S  I  S  G  E  K  T  T  F  S  V  *  I  D  K  I  *  V  G  *  *  C  F  G  V  T  E  D  G  G  I  G  Q  K  *  C  F  R  V  K  G  V  E  I  Q  *  *  F  G  E  N  *  *  *  G  C  E  *  R  E  E  S  E  A  *  N  F  K  R  *  C  *  N  W  K  K  S  C  S  *  *  W  W  R  F  S  S  *  E  *  G  R  Y  K  E  W  *  Y  E  S  C  G  R  *  F  P  R  *  S  F  W  A  S  L  C  *  W  E  E  M  G  L  L  S  G  L  A  P  P  V  V  F  H  *  L  Y  G  L  I  F  Q  E  S  K  M  Y  Y  E  S  F  H  G  L  E  F  S  S  M  D  V  Y  G  S  V  S  E  G  T  *  E  C  T  *  P  S  P  G  C  L  C  G  G  F  L  *  D  N  R  T  *  F  L  *  W  F  C  E  G  W  :  L  Q  S  G  C  C  D  A  *  S  *  *  A  P  T  R  H  T  N  T  C  I  C  F  F  L  V  *  M  E  A  D  K  T  L  S  F  P  L  Q  *  T  S  Q  A  G  S  S  I  Q  :  I  W  W  N  L  S  *  L  R  H  H  S  V  E  F  I  V  F  T  *  *  Y  C  C  F  *  G  *  P  T  W  K  N  F  E  W  C  C  N  G  F  *  K  A  Q  :  S  F  C  N  G  V  F  E  G  V  L  C  I  L  *  R  H  T  I  E  M  E  W  S  *  S  F  D  K  S  C  *  *  L  F  R  Q  W  *  S  F  Q  *  K  E  G  D  Q  I  S  T  L  V  C  F  L  P  H  R  S  *  Q  Y  Y  Q  :  I  L  L  G  T  S  N  G  N  *  E  N  *  T  R  Y  A  V  Q  N  Y  P  Q  R  S  C  H  I  S  L  L  E  W  L  N  F  S  Y  G  S  R  G  W  Q  P  C  T  P  A  H  *  L  Q  L  P  T  L  L  *  H  I  V  K  H  H  *  S  R  W  M  T  F  *  S  I  F  V  F  M  P  L  D  I  P  H  S  F  *  R  Y  S  G  G  A  S  S  M  N  N  I  *  I  F  V  V  Q  N  M  N  L  Q  L  V  G  F  L  D  L  V  Y  I  S  C  C  R  F  P  R  G  T  N  *  E  V  L  L  F  V  A  E  F  L  L  Y  I  S  P  C  E  F  C  R  T  I  C  S  H  W  Q  Q  D  N  D  I  F  K  *  C  S  C  M </second_frame>
            <third_frame>   V  I  L  Q  L  *  P  F  *  Q  N  L  S  H  P  N  T  L  L  R  P  K  P  S  V  T  S  E  V  A  T  A  Y  R  P  P  Y  H  M  L  R  N  L  R  T  R  R  R  P  L  Y  G  A  H  I  C  A  L  A  A  A  I  L  L  L  L  S  V  S  L  L  Y  S  R  L  N  F  F  L  Q  P  N  N  P  H  P  H  P  L  Q  Y  D  T  I  S  L  N  N  P  L  V  D  D  L  A  D  A  D  Y  R  S  S  D  D  R  I  D  E  L  D  V  A  D  S  N  N  N  N  D  D  E  F  L  L  S  N  E  S  E  E  D  D  E  E  I  I  N  Q  Y  P  R  V  S  S  T  Y  F  Y  D  Q  R  H  G  V  V  R  R  A  F  N  K  R  S  I  E  E  W  E  D  Y  V  N  F  E  S  R  M  K  L  G  L  G  F  K  S  D  E  S  K  A  A  F  G  S  D  D  L  P  V  D  V  Q  M  R  M  K  L  S  E  I  E  S  V  E  D  A  L  L  L  K  G  S  P  L  R  E  G  W  G  E  W  F  E  K  K  S  D  F  L  R  R  D  R  M  F  K  S  N  L  E  A  L  N  P  N  N  N  P  M  L  Q  D  P  D  G  A  G  T  T  G  L  T  K  G  D  K  I  V  L  K  G  L  M  N  E  F  K  K  V  P  F  L  V  K  K  P  L  S  V  S  E  L  T  K  S  E  L  V  N  D  A  L  E  L  Q  K  M  A  G  L  A  K  N  D  V  F  E  S  K  E  L  K  F  N  S  D  L  V  K  T  N  D  E  D  V  N  R  G  K  R  V  K  R  R  T  L  N  D  D  A  R  I  G  K  R  V  V  H  D  S  G  G  D  S  A  P  R  S  K  E  D  I  R  N  G  N  M  K  V  V  E  D  D  S  R  G  E  V  S  G  L  V  F  A  D  G  K  R  W  G  Y  F  P  G  L  H  P  R  L  S  F  T  N  F  M  D  S  F  F  R  K  A  K  C  T  M  R  V  F  M  V  W  N  S  P  A  W  M  F  T  A  R  Y  Q  R  G  L  E  S  V  L  N  R  H  R  D  A  C  V  V  V  F  S  E  T  I  E  L  N  F  F  S  G  F  V  K  D  G :   F  K  V  A  V  V  M  P  N  L  D  E  L  L  L  G  T  P  T  H  V  F  A  S  F  W  Y  E  W  K  Q  T  R  H  Y  P  F  H  Y  S  E  L  V  R  L  A  A  L  Y  K :   Y  G  G  I  Y  L  D  S  D  I  I  V  L  N  S  L  S  S  L  S  N  T  V  A  F  E  D  D  R  R  G  K  T  L  N  G  A  V  M  A  F  R  K  H  S :   P  F  V  M  E  C  L  K  E  F  Y  A  S  Y  D  D  T  Q  L  R  W  N  G  A  D  L  L  T  R  V  A  S  N  F  S  V  N  G  N  L  S  S  R  K  R  E  I  K  F  Q  P  S  F  V  F  F  P  I  G  H  N  N  I  T  R :   Y  F  S  A  P  A  M  E  T  E  K  T  K  Q  D  T  L  F  K  T  I  L  K  E  A  V  T  F  H  F  W  N  G  L  T  S  A  M  V  P  E  A  G  S  L  A  H  R  L  I  N  Y  N  C  L  R  C  S  D  T  L  *  N  T  I  K  A  D  G  *  P  F  K  A  F  L  F  S  C  H  *  I  Y  L  T  A  F  K  D  I  P  V  V  L  H  P  *  I  I  Y  K  F  L  L  Y  K  I  *  I  S  S  W  L  A  F  W  T  L  S  I  L  V  V  V  D  S  L  E  G  R  I  K  R  S  C  F  L  *  L  S  S  Y  C  I  F  P  L  V  S  F  V  E  L  F  V  V  I  G  N  R  T  M  I  Y  L  N  D  V  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44951" stop="46416"/>
                    <exon start="46859" stop="47008"/>
                    <exon start="48058" stop="48192"/>
                    <exon start="48685" stop="48879"/>
                    <exon start="50840" stop="51026"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2130</number_coding_nucleotides>
                  <number_encoded_amino_acids>710</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNLSHPNTLLRPKPSVTSEVATAYRPPYHMLRNLRTRRRPLYGAHICALAAAILLLLSVSLLYSRLNFFLQPNNPHPHPLQYDTISLNNPLVDDLADADYRSSDDRIDELDVADSNNNNDDEFLLSNESEEDDEEIINQYPRVSSTYFYDQRHGVVRRAFNKRSIEEWEDYVNFESRMKLGLGFKSDESKAAFGSDDLPVDVQMRMKLSEIESVEDALLLKGSPLREGWGEWFEKKSDFLRRDRMFKSNLEALNPNNNPMLQDPDGAGTTGLTKGDKIVLKGLMNEFKKVPFLVKKPLSVSELTKSELVNDALELQKMAGLAKNDVFESKELKFNSDLVKTNDEDVNRGKRVKRRTLNDDARIGKRVVHDSGGDSAPRSKEDIRNGNMKVVEDDSRGEVSGLVFADGKRWGYFPGLHPRLSFTNFMDSFFRKAKCTMRVFMVWNSPAWMFTARYQRGLESVLNRHRDACVVVFSETIELNFFSGFVKDGFKVAVVMPNLDELLLGTPTHVFASFWYEWKQTRHYPFHYSELVRLAALYKYGGIYLDSDIIVLNSLSSLSNTVAFEDDRRGKTLNGAVMAFRKHSPFVMECLKEFYASYDDTQLRWNGADLLTRVASNFSVNGNLSSRKREIKFQPSFVFFPIGHNNITRYFSAPAMETEKTKQDTLFKTILKEAVTFHFWNGLTSAMVPEAGSLAHRLINYNCLRCSDTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="48558" e_stop="48594"/>
            <exon e_start="48685" e_stop="48879"/>
            <exon e_start="50840" e_stop="51352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.314" acc_prob="0.977" e_score="0.946"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="0.923"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="48558" e_stop="48594" e_length="37"/>
          </exon>
          <intron i_serial="1" don_prob="0.314" acc_prob="0.977">
            <gDNA_intron_boundary i_start="48595" i_stop="48684" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="0.923">
            <gDNA_exon_boundary e_start="48685" e_stop="48879" e_length="195"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48880" i_stop="50839" i_length="1960"/>
          </intron>
          <exon e_serial="3" e_score="0.930">
            <gDNA_exon_boundary e_start="50840" e_stop="51352" e_length="513"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48558" stop="48594"/>
              <exon start="48685" stop="48879"/>
              <exon start="50840" stop="51347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48558" stop="48594"/>
              <exon start="48685" stop="48879"/>
              <exon start="50840" stop="51274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48558" stop="48594"/>
              <exon start="48685" stop="48879"/>
              <exon start="50840" stop="51103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282649" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48563" stop="48594"/>
              <exon start="48685" stop="48879"/>
              <exon start="50840" stop="51352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48564" stop="48594"/>
              <exon start="48685" stop="48879"/>
              <exon start="50840" stop="51193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48718" stop="48879"/>
              <exon start="50840" stop="51352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371096" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCTACAGTTTATTGCGGGAGAAGGATAGGAAAACAA : TCCTTTTGTAATGGAGTGTTTGAAGGAGTTTTATGCATCTTATGACGACACACAATTGAGATGGAATGGAGCTGATCTTTTGACAAGAGTTGCTAGTAACTTTTCCGTCAATGGTAATCTTTCCAGTAGAAAGAGGGAGATCAAATTTCAACCCTCGTTTGTTTTCTTCCCCATCGGTCATAACAATATTACCAG : ATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACCTTGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</gDNA_template>
            <first_frame> C  Y  S  L  L  R  E  K  D  R  K  T   : I  L  L  *  W  S  V  *  R  S  F  M  H  L  M  T  T  H  N  *  D  G  M  E  L  I  F  *  Q  E  L  L  V  T  F  P  S  M  V  I  F  P  V  E  R  G  R  S  N  F  N  P  R  L  F  S  S  P  S  V  I  T  I  L  P   : D  T  S  R  H  Q  Q  W  K  L  R  K  L  N  K  I  R  C  S  K  L  S  S  K  K  L  S  H  F  T  F  G  M  A  *  L  Q  L  W  F  Q  R  L  A  A  L  H  T  G  S  L  I  T  I  A  Y  V  A  L  T  H  C  E  T  P  L  K  Q  M  D  D  L  L  K  H  F  C  F  H  A  I  R  Y  T  S  Q  L  L  K  I  F  R  W  C  F  I  H  E  *  Y  I  N  F  C  C  T  K  Y  E  S  P  V  G  W  L  S  G  P  C  L  Y  *  L  L  *  I  P  S  R  D  E  L  R  G  P  A  F  C  S  *  V  L  T  V  Y  F  P  L  *  V  L  *  N  Y  L  *  S  L  A  T  G  Q  *  Y  I  *  M  M  F  L  Y  </first_frame>
            <second_frame>  A  T  V  Y  C  G  R  R  I  G  K  Q  :  S  F  C  N  G  V  F  E  G  V  L  C  I  L  *  R  H  T  I  E  M  E  W  S  *  S  F  D  K  S  C  *  *  L  F  R  Q  W  *  S  F  Q  *  K  E  G  D  Q  I  S  T  L  V  C  F  L  P  H  R  S  *  Q  Y  Y  Q  :  I  L  L  G  T  S  N  G  N  *  E  N  *  T  R  Y  A  V  Q  N  Y  P  Q  R  S  C  H  I  S  L  L  E  W  L  N  F  S  Y  G  S  R  G  W  Q  P  C  T  P  A  H  *  L  Q  L  P  T  L  L  *  H  I  V  K  H  H  *  S  R  W  M  T  F  *  S  I  F  V  F  M  P  L  D  I  P  H  S  F  *  R  Y  S  G  G  A  S  S  M  N  N  I  *  I  F  V  V  Q  N  M  N  L  Q  L  V  G  F  L  D  L  V  Y  I  S  C  C  R  F  P  R  G  T  N  *  E  V  L  L  F  V  A  E  F  L  L  Y  I  S  P  C  E  F  C  R  T  I  C  S  H  W  Q  Q  D  N  D  I  F  K  *  C  S  C  M </second_frame>
            <third_frame>   L  Q  F  I  A  G  E  G  *  E  N  N :   P  F  V  M  E  C  L  K  E  F  Y  A  S  Y  D  D  T  Q  L  R  W  N  G  A  D  L  L  T  R  V  A  S  N  F  S  V  N  G  N  L  S  S  R  K  R  E  I  K  F  Q  P  S  F  V  F  F  P  I  G  H  N  N  I  T  R :   Y  F  S  A  P  A  M  E  T  E  K  T  K  Q  D  T  L  F  K  T  I  L  K  E  A  V  T  F  H  F  W  N  G  L  T  S  A  M  V  P  E  A  G  S  L  A  H  R  L  I  N  Y  N  C  L  R  C  S  D  T  L  *  N  T  I  K  A  D  G  *  P  F  K  A  F  L  F  S  C  H  *  I  Y  L  T  A  F  K  D  I  P  V  V  L  H  P  *  I  I  Y  K  F  L  L  Y  K  I  *  I  S  S  W  L  A  F  W  T  L  S  I  L  V  V  V  D  S  L  E  G  R  I  K  R  S  C  F  L  *  L  S  S  Y  C  I  F  P  L  V  S  F  V  E  L  F  V  V  I  G  N  R  T  M  I  Y  L  N  D  V  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48587" stop="48594"/>
                    <exon start="48685" stop="48879"/>
                    <exon start="50840" stop="51026"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENNPFVMECLKEFYASYDDTQLRWNGADLLTRVASNFSVNGNLSSRKREIKFQPSFVFFPIGHNNITRYFSAPAMETEKTKQDTLFKTILKEAVTFHFWNGLTSAMVPEAGSLAHRLINYNCLRCSDTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="50512" e_stop="51352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="50512" e_stop="51352" e_length="841"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50512" stop="51352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548273" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCTGTGAGAGTAAAATATCTTTTTGAGACAAAAAACAGAATGGTCAGCTAATTCCCATCCAATCTTATTTGAAATCTTTGAACTCTCAAAAGGCGACCTTCTATATTTTGGGCTTCATTAGAGGTCATCTTTTTCACATGGTATTTAAGTGGACCACTGGCTCTTTTAAATGTCCTCTTTTAAAAAGTTTTTGAGTCCTTGATCCGTCTAAATATCTCATTCAGGGAGCTTTGGCAGAATCTGAACATGTCATGGTTTCTGTGATCTGTCATCATCATATCTGCTGGTTAAAGTTACATAATTTGCTTATCTCTTTCTTTTGACAGATACTTCTCGGCACCAGCAATGGAAACTGAGAAAACTAAACAAGATACGCTGTTCAAAACTATCCTCAAAGAAGCTGTCACATTTCACTTTTGGAATGGCTTAACTTCAGCTATGGTTCCAGAGGCTGGCAGCCTTGCACACCGGCTCATTAATTACAATTGCCTACGTTGCTCTGACACATTGTGAAACACCATTAAAGCAGATGGATGACCTTTTAAAGCATTTTTGTTTTCATGCCATTAGATATACCTCACAGCTTTTAAAGATATTCCGGTGGTGCTTCATCCATGAATAATATATAAATTTTTGTTGTACAAAATATGAATCTCCAGTTGGTTGGCTTTCTGGACCTTGTCTATATTAGTTGTTGTAGATTCCCTCGAGGGACGAATTAAGAGGTCCTGCTTTTTGTAGCTGAGTTCTTACTGTATATTTCCCCTTGTGAGTTTTGTAGAACTATTTGTAGTCATTGGCAACAGGACAATGATATATTTAAATGATGTTCTTGTATG</gDNA_template>
            <first_frame> *  L  *  E  *  N  I  F  L  R  Q  K  T  E  W  S  A  N  S  H  P  I  L  F  E  I  F  E  L  S  K  G  D  L  L  Y  F  G  L  H  *  R  S  S  F  S  H  G  I  *  V  D  H  W  L  F  *  M  S  S  F  K  K  F  L  S  P  *  S  V  *  I  S  H  S  G  S  F  G  R  I  *  T  C  H  G  F  C  D  L  S  S  S  Y  L  L  V  K  V  T  *  F  A  Y  L  F  L  L  T  D  T  S  R  H  Q  Q  W  K  L  R  K  L  N  K  I  R  C  S  K  L  S  S  K  K  L  S  H  F  T  F  G  M  A  *  L  Q  L  W  F  Q  R  L  A  A  L  H  T  G  S  L  I  T  I  A  Y  V  A  L  T  H  C  E  T  P  L  K  Q  M  D  D  L  L  K  H  F  C  F  H  A  I  R  Y  T  S  Q  L  L  K  I  F  R  W  C  F  I  H  E  *  Y  I  N  F  C  C  T  K  Y  E  S  P  V  G  W  L  S  G  P  C  L  Y  *  L  L  *  I  P  S  R  D  E  L  R  G  P  A  F  C  S  *  V  L  T  V  Y  F  P  L  *  V  L  *  N  Y  L  *  S  L  A  T  G  Q  *  Y  I  *  M  M  F  L  Y  </first_frame>
            <second_frame>  S  C  E  S  K  I  S  F  *  D  K  K  Q  N  G  Q  L  I  P  I  Q  S  Y  L  K  S  L  N  S  Q  K  A  T  F  Y  I  L  G  F  I  R  G  H  L  F  H  M  V  F  K  W  T  T  G  S  F  K  C  P  L  L  K  S  F  *  V  L  D  P  S  K  Y  L  I  Q  G  A  L  A  E  S  E  H  V  M  V  S  V  I  C  H  H  H  I  C  W  L  K  L  H  N  L  L  I  S  F  F  *  Q  I  L  L  G  T  S  N  G  N  *  E  N  *  T  R  Y  A  V  Q  N  Y  P  Q  R  S  C  H  I  S  L  L  E  W  L  N  F  S  Y  G  S  R  G  W  Q  P  C  T  P  A  H  *  L  Q  L  P  T  L  L  *  H  I  V  K  H  H  *  S  R  W  M  T  F  *  S  I  F  V  F  M  P  L  D  I  P  H  S  F  *  R  Y  S  G  G  A  S  S  M  N  N  I  *  I  F  V  V  Q  N  M  N  L  Q  L  V  G  F  L  D  L  V  Y  I  S  C  C  R  F  P  R  G  T  N  *  E  V  L  L  F  V  A  E  F  L  L  Y  I  S  P  C  E  F  C  R  T  I  C  S  H  W  Q  Q  D  N  D  I  F  K  *  C  S  C  M </second_frame>
            <third_frame>   A  V  R  V  K  Y  L  F  E  T  K  N  R  M  V  S  *  F  P  S  N  L  I  *  N  L  *  T  L  K  R  R  P  S  I  F  W  A  S  L  E  V  I  F  F  T  W  Y  L  S  G  P  L  A  L  L  N  V  L  F  *  K  V  F  E  S  L  I  R  L  N  I  S  F  R  E  L  W  Q  N  L  N  M  S  W  F  L  *  S  V  I  I  I  S  A  G  *  S  Y  I  I  C  L  S  L  S  F  D  R  Y  F  S  A  P  A  M  E  T  E  K  T  K  Q  D  T  L  F  K  T  I  L  K  E  A  V  T  F  H  F  W  N  G  L  T  S  A  M  V  P  E  A  G  S  L  A  H  R  L  I  N  Y  N  C  L  R  C  S  D  T  L  *  N  T  I  K  A  D  G  *  P  F  K  A  F  L  F  S  C  H  *  I  Y  L  T  A  F  K  D  I  P  V  V  L  H  P  *  I  I  Y  K  F  L  L  Y  K  I  *  I  S  S  W  L  A  F  W  T  L  S  I  L  V  V  V  D  S  L  E  G  R  I  K  R  S  C  F  L  *  L  S  S  Y  C  I  F  P  L  V  S  F  V  E  L  F  V  V  I  G  N  R  T  M  I  Y  L  N  D  V  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50805" stop="51026"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SYIICLSLSFDRYFSAPAMETEKTKQDTLFKTILKEAVTFHFWNGLTSAMVPEAGSLAHRLINYNCLRCSDTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="63586" PGL_stop="63141"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63586" e_stop="63141"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="63586" e_stop="63141" e_length="446"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63586" stop="63141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCAAATTTTTTATTCTAATACGAAATTAAATAACAATACACAAAAAAAAATAGTTTAAATTTTTTTTCTTTAAACTAAGGAATGAAAGAGAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAATTAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTTAAAAATAGAAGCAACAAATATAAATTTGAAACAAATTTTTTAACTTCCGTTAAATGAAGGGTATATGTGAACCATTTTGTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGGTAAGGGCATATATGTGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGGGTATATCAGACCCTTTTCCCTACTTTT</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  I  L  I  R  N  *  I  T  I  H  K  K  K  *  F  K  F  F  F  F  K  L  R  N  E  R  E  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  I  N  L  C  M  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  *  K  *  K  Q  Q  I  *  I  *  N  K  F  F  N  F  R  *  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  P  F  V  *  R  *  G  H  I  C  A  T  F  I  T  R  G  I  S  A  L  N  D  K  V  E  G  Y  I  R  P  F  S  L  L   </first_frame>
            <second_frame>  Y  C  R  *  P  N  F  L  F  *  Y  E  I  K  *  Q  Y  T  K  K  N  S  L  N  F  F  S  L  N  *  G  M  K  E  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  L  I  Y  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  F  K  N  R  S  N  K  Y  K  F  E  T  N  F  L  T  S  V  K  *  R  V  Y  V  N  H  F  V  T  A  G  V  Y  V  S  R  L  Y  N  G  K  G  I  Y  V  P  L  L  *  R  G  V  Y  Q  L  *  M  T  K  L  R  G  I  S  D  P  F  P  Y  F  </second_frame>
            <third_frame>   I  V  D  D  Q  I  F  Y  S  N  T  K  L  N  N  N  T  Q  K  K  I  V  *  I  F  F  L  *  T  K  E  *  K  R  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  N  *  F  M  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  L  K  I  E  A  T  N  I  N  L  K  Q  I  F  *  L  P  L  N  E  G  Y  M  *  T  I  L  *  R  Q  G  Y  M  *  A  V  C  I  T  V  R  A  Y  M  C  H  F  Y  N  E  G  Y  I  S  S  K  *  Q  S  *  G  V  Y  Q  T  L  F  P  T  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0101G09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="80393" PGL_stop="74909"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80393" e_stop="80347"/>
            <exon e_start="80247" e_stop="80126"/>
            <exon e_start="78419" e_stop="78349"/>
            <exon e_start="76846" e_stop="76744"/>
            <exon e_start="76631" e_stop="76378"/>
            <exon e_start="76273" e_stop="75626"/>
            <exon e_start="74920" e_stop="74909"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.353" acc_prob="1.000" e_score="0.979"/>
          <exon-intron don_prob="0.854" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.905" acc_prob="0.758" e_score="1.000"/>
          <exon-intron don_prob="0.598" acc_prob="0.027" e_score="0.990"/>
          <exon-intron don_prob="0.773" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.764" e_score="0.997"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="80393" e_stop="80347" e_length="47"/>
          </exon>
          <intron i_serial="1" don_prob="0.353" acc_prob="1.000">
            <gDNA_intron_boundary i_start="80346" i_stop="80248" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80247" e_stop="80126" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.854" acc_prob="0.987">
            <gDNA_intron_boundary i_start="80125" i_stop="78420" i_length="1706"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78419" e_stop="78349" e_length="71"/>
          </exon>
          <intron i_serial="3" don_prob="0.905" acc_prob="0.758">
            <gDNA_intron_boundary i_start="78348" i_stop="76847" i_length="1502"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="76846" e_stop="76744" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.598" acc_prob="0.027">
            <gDNA_intron_boundary i_start="76743" i_stop="76632" i_length="112"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="76631" e_stop="76378" e_length="254"/>
          </exon>
          <intron i_serial="5" don_prob="0.773" acc_prob="0.977">
            <gDNA_intron_boundary i_start="76377" i_stop="76274" i_length="104"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="76273" e_stop="75626" e_length="648"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.764">
            <gDNA_intron_boundary i_start="75625" i_stop="74921" i_length="705"/>
          </intron>
          <exon e_serial="7" e_score="0.667">
            <gDNA_exon_boundary e_start="74920" e_stop="74909" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80393" stop="80347"/>
              <exon start="80247" stop="80126"/>
              <exon start="78419" stop="78349"/>
              <exon start="76846" stop="76744"/>
              <exon start="76631" stop="76378"/>
              <exon start="76273" stop="76196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395576" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76608" stop="76378"/>
              <exon start="76273" stop="75997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76529" stop="76378"/>
              <exon start="76273" stop="75626"/>
              <exon start="74920" stop="74909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76453" stop="76378"/>
              <exon start="76273" stop="75669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550567" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCATGGCTGAATTTCTCTCTTGTGCACCACAACGCCATCAGAATG : CAGACAATAATGGCGAAGATGAAGGTGGTGAGGAGTGAAATTGCTGCGAAACAAGTGGTTGTGATCGAGGAAAATGAGGAGATACATTGGTATGCTTCTTGAATTTCGTCCGGAGGACACAG : CTACTCAAATCCAAATGCAAAGGATCTTCAAGAGTAAAGGAATAAAACAAGACCTTGGTTCATTGTGAAAG : TTTATGTGTGATCCATAGCTGAAAGTTTGGCATTTATCTCGGTTTTCCCTTCCTATTTGATTTTTTTTCAATAATCGCCGTTAGGTCAATTCTGCTATTTAAG : TCAAGTTTCAACCAGCTTTTGGGAATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAG : AGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCTTTCACTTTCAGTGCCAGCTGGAATGGTGATTTTCTAGCTACTGGAGTTCACAATTCTAATCCATAATTAA : GAAAAGGAGAAA</gDNA_template>
            <first_frame> F  H  G  *  I  S  L  L  C  T  T  T  P  S  E  C :   R  Q  *  W  R  R  *  R  W  *  G  V  K  L  L  R  N  K  W  L  *  S  R  K  M  R  R  Y  I  G  M  L  L  E  F  R  P  E  D  T   : A  T  Q  I  Q  M  Q  R  I  F  K  S  K  G  I  K  Q  D  L  G  S  L  *  K  :  F  M  C  D  P  *  L  K  V  W  H  L  S  R  F  S  L  P  I  *  F  F  F  N  N  R  R  *  V  N  S  A  I  *   : V  K  F  Q  P  A  F  G  N  S  G  S  H  V  L  I  K  V  N  F  I  Y  T  D  A  T  V  Y  L  H  N  G  C  S  N  P  V  V  H  C  D  L  K  P  S  V  L  L  D  Q  D  M  V  G  H  V  S  D  F  G  I  A  K  L  L  G  A  G  E  S  F  V  Q  T  R  T  I  A  T  I  G  *  L  L  Q  :  S  M  D  K  M  E  S  Y  P  Q  A  A  M  F  I  V  S  V  S  *  L  M  E  T  F  T  R  I  R  P  G  D  E  R  F  T  G  E  L  S  I  R  R  W  V  S  D  S  F  P  D  E  I  H  K  V  V  D  A  N  L  V  Q  P  R  G  *  T  N  *  R  K  D  A  V  S  V  V  Y  Y  R  V  S  F  E  L  Y  F  S  N  T  *  C  K  N  *  Y  G  R  F  S  F  N  T  S  K  Y  Q  A  P  V  C  Q  *  S  P  P  K  K  A  T  E  G  F  S  T  E  K  S  N  L  L  G  N  G  K  V  Y  N  V  Q  L  E  G  A  F  K  S  F  D  T  E  E  C  E  I  *  P  K  S  S  K  P  *  C  *  N  T  C  L  V  G  H  L  I  N  G  C  T  L  T  S  C  S  W  I  Y  F  I  L  C  T  L  S  L  S  V  P  A  G  M  V  I  F  *  L  L  E  F  T  I  L  I  H  N  *  :  E  K  E  K </first_frame>
            <second_frame>  F  M  A  E  F  L  S  C  A  P  Q  R  H  Q  N   : A  D  N  N  G  E  D  E  G  G  E  E  *  N  C  C  E  T  S  G  C  D  R  G  K  *  G  D  T  L  V  C  F  L  N  F  V  R  R  T  Q  :  L  L  K  S  K  C  K  G  S  S  R  V  K  E  *  N  K  T  L  V  H  C  E  S :   L  C  V  I  H  S  *  K  F  G  I  Y  L  G  F  P  F  L  F  D  F  F  S  I  I  A  V  R  S  I  L  L  F  K  :  S  S  F  N  Q  L  L  G  I  L  E  V  T  C  S  S  K  *  I  L  Y  T  L  M  Q  R  S  I  S  T  M  G  V  Q  I  Q  W  C  I  V  T  *  S  Q  V  S  C  L  I  K  T  W  L  A  M  S  V  I  L  A  L  Q  N  C  *  V  Q  G  R  V  L  F  K  Q  G  Q  *  Q  P  L  D  N  C  S  R :   V  W  T  R  W  N  R  I  H  K  L  R  C  L  *  F  R  Y  P  D  *  W  R  R  L  Q  E  S  D  Q  V  M  K  D  L  L  E  S  *  A  Y  D  V  G  L  V  I  L  F  Q  M  R  F  I  R  W  W  M  L  I  W  Y  S  L  G  D  E  R  I  D  A  K  M  Q  C  L  L  S  I  I  E  L  A  L  S  C  T  L  A  T  P  D  A  R  I  S  M  E  D  S  L  S  T  L  Q  N  I  R  L  Q  F  V  N  S  R  H  R  K  K  Q  L  K  D  L  V  P  K  K  A  T  C  L  V  M  A  R  S  T  M  Y  N  W  R  V  H  S  K  V  L  I  Q  K  N  V  K  S  D  Q  S  H  Q  S  L  N  V  R  I  H  V  *  W  D  T  *  *  M  A  V  L  S  Q  V  V  L  G  F  T  S  Y  Y  V  L  F  H  F  Q  C  Q  L  E  W  *  F  S  S  Y  W  S  S  Q  F  *  S  I  I  K :   K  R  R   </second_frame>
            <third_frame>   S  W  L  N  F  S  L  V  H  H  N  A  I  R  M  :  Q  T  I  M  A  K  M  K  V  V  R  S  E  I  A  A  K  Q  V  V  V  I  E  E  N  E  E  I  H  W  Y  A  S  *  I  S  S  G  G  H  S :   Y  S  N  P  N  A  K  D  L  Q  E  *  R  N  K  T  R  P  W  F  I  V  K   : V  Y  V  *  S  I  A  E  S  L  A  F  I  S  V  F  P  S  Y  L  I  F  F  Q  *  S  P  L  G  Q  F  C  Y  L  S :   Q  V  S  T  S  F  W  E  F  W  K  S  R  A  H  Q  S  K  F  Y  I  H  *  C  N  G  L  S  P  Q  W  V  F  K  S  S  G  A  L  *  L  E  A  K  C  L  A  *  S  R  H  G  W  P  C  Q  *  F  W  H  C  K  I  V  R  C  R  G  E  F  C  S  N  K  D  N  S  N  H  W  I  I  A  P   : E  Y  G  Q  D  G  I  V  S  T  S  C  D  V  Y  S  F  G  I  L  I  D  G  D  V  Y  K  N  Q  T  R  *  *  K  I  Y  W  R  V  E  H  T  T  L  G  *  *  F  F  S  R  *  D  S  *  G  G  G  C  *  F  G  T  A  *  G  M  N  E  L  T  Q  R  C  S  V  C  C  L  L  *  S  *  L  *  A  V  L  *  Q  H  L  M  Q  E  L  V  W  K  I  L  F  Q  H  F  K  I  S  G  S  S  L  S  I  V  A  T  E  K  S  N  *  R  I  *  Y  R  K  K  Q  L  A  W  *  W  Q  G  L  Q  C  T  I  G  G  C  I  Q  K  F  *  Y  R  R  M  *  N  L  T  K  V  I  K  A  L  M  L  E  Y  M  S  S  G  T  L  D  K  W  L  Y  S  H  K  L  F  L  D  L  L  H  I  M  Y  S  F  T  F  S  A  S  W  N  G  D  F  L  A  T  G  V  H  N  S  N  P  *  L   : R  K  G  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76155" stop="75763"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AYDVGLVILFQMRFIRWWMLIWYSLGDERIDAKMQCLLSIIELALSCTLATPDARISMEDSLSTLQNIRLQFVNSRHRKKQLKDLVPKKATCLVMARSTMYNWRVHSKVLIQKNVKSDQSHQSLNVRIHV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76744" stop="76387"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKFQPAFGNSGSHVLIKVNFIYTDATVYLHNGCSNPVVHCDLKPSVLLDQDMVGHVSDFGIAKLLGAGESFVQTRTIATIG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="76647" e_stop="76378"/>
            <exon e_start="76273" e_stop="75626"/>
            <exon e_start="74920" e_stop="74909"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.773" acc_prob="0.977" e_score="0.989"/>
          <exon-intron don_prob="0.000" acc_prob="0.764" e_score="0.997"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="76647" e_stop="76378" e_length="270"/>
          </exon>
          <intron i_serial="1" don_prob="0.773" acc_prob="0.977">
            <gDNA_intron_boundary i_start="76377" i_stop="76274" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="76273" e_stop="75626" e_length="648"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.764">
            <gDNA_intron_boundary i_start="75625" i_stop="74921" i_length="705"/>
          </intron>
          <exon e_serial="3" e_score="0.667">
            <gDNA_exon_boundary e_start="74920" e_stop="74909" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76647" stop="76378"/>
              <exon start="76273" stop="75631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76608" stop="76378"/>
              <exon start="76273" stop="75997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76529" stop="76378"/>
              <exon start="76273" stop="75626"/>
              <exon start="74920" stop="74909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76453" stop="76378"/>
              <exon start="76273" stop="75669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550567" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATCATACATACATAGTCAAGTTTCAACCAGCTTTTGGGAATTCTGGAAGTCACGTGCTCATCAAAGTAAATTTTATATACACTGATGCAACGGTCTATCTCCACAATGGGTGTTCAAATCCAGTGGTGCATTGTGACTTGAAGCCAAGTGTCTTGCTTGATCAAGACATGGTTGGCCATGTCAGTGATTTTGGCATTGCAAAATTGTTAGGTGCAGGGGAGAGTTTTGTTCAAACAAGGACAATAGCAACCATTGGATAATTGCTCCAG : AGTATGGACAAGATGGAATCGTATCCACAAGCTGCGATGTTTATAGTTTCGGTATCCTGATTGATGGAGACGTTTACAAGAATCAGACCAGGTGATGAAAGATTTACTGGAGAGTTGAGCATACGACGTTGGGTTAGTGATTCTTTTCCAGATGAGATTCATAAGGTGGTGGATGCTAATTTGGTACAGCCTAGGGGATGAACGAATTGACGCAAAGATGCAGTGTCTGTTGTCTATTATAGAGTTAGCTTTGAGCTGTACTTTAGCAACACCTGATGCAAGAATTAGTATGGAAGATTCTCTTTCAACACTTCAAAATATCAGGCTCCAGTTTGTCAATAGTCGCCACCGAAAAAAGCAACTGAAGGATTTAGTACCGAAAAAAGCAACTTGCTTGGTAATGGCAAGGTCTACAATGTACAATTGGAGGGTGCATTCAAAAGTTTTGATACAGAAGAATGTGAAATCTGACCAAAGTCATCAAAGCCTTAATGTTAGAATACATGTCTAGTGGGACACTTGATAAATGGCTGTACTCTCACAAGTTGTTCTTGGATTTACTTCATATTATGTACTCTTTCACTTTCAGTGCCAGCTGGAATGGTGATTTTCTAGCTACTGGAGTTCACAATTCTAATCCATAATTAA : GAAAAGGAGAAA</gDNA_template>
            <first_frame> Y  H  T  Y  I  V  K  F  Q  P  A  F  G  N  S  G  S  H  V  L  I  K  V  N  F  I  Y  T  D  A  T  V  Y  L  H  N  G  C  S  N  P  V  V  H  C  D  L  K  P  S  V  L  L  D  Q  D  M  V  G  H  V  S  D  F  G  I  A  K  L  L  G  A  G  E  S  F  V  Q  T  R  T  I  A  T  I  G  *  L  L  Q  :  S  M  D  K  M  E  S  Y  P  Q  A  A  M  F  I  V  S  V  S  *  L  M  E  T  F  T  R  I  R  P  G  D  E  R  F  T  G  E  L  S  I  R  R  W  V  S  D  S  F  P  D  E  I  H  K  V  V  D  A  N  L  V  Q  P  R  G  *  T  N  *  R  K  D  A  V  S  V  V  Y  Y  R  V  S  F  E  L  Y  F  S  N  T  *  C  K  N  *  Y  G  R  F  S  F  N  T  S  K  Y  Q  A  P  V  C  Q  *  S  P  P  K  K  A  T  E  G  F  S  T  E  K  S  N  L  L  G  N  G  K  V  Y  N  V  Q  L  E  G  A  F  K  S  F  D  T  E  E  C  E  I  *  P  K  S  S  K  P  *  C  *  N  T  C  L  V  G  H  L  I  N  G  C  T  L  T  S  C  S  W  I  Y  F  I  L  C  T  L  S  L  S  V  P  A  G  M  V  I  F  *  L  L  E  F  T  I  L  I  H  N  *  :  E  K  E  K </first_frame>
            <second_frame>  I  I  H  T  *  S  S  F  N  Q  L  L  G  I  L  E  V  T  C  S  S  K  *  I  L  Y  T  L  M  Q  R  S  I  S  T  M  G  V  Q  I  Q  W  C  I  V  T  *  S  Q  V  S  C  L  I  K  T  W  L  A  M  S  V  I  L  A  L  Q  N  C  *  V  Q  G  R  V  L  F  K  Q  G  Q  *  Q  P  L  D  N  C  S  R :   V  W  T  R  W  N  R  I  H  K  L  R  C  L  *  F  R  Y  P  D  *  W  R  R  L  Q  E  S  D  Q  V  M  K  D  L  L  E  S  *  A  Y  D  V  G  L  V  I  L  F  Q  M  R  F  I  R  W  W  M  L  I  W  Y  S  L  G  D  E  R  I  D  A  K  M  Q  C  L  L  S  I  I  E  L  A  L  S  C  T  L  A  T  P  D  A  R  I  S  M  E  D  S  L  S  T  L  Q  N  I  R  L  Q  F  V  N  S  R  H  R  K  K  Q  L  K  D  L  V  P  K  K  A  T  C  L  V  M  A  R  S  T  M  Y  N  W  R  V  H  S  K  V  L  I  Q  K  N  V  K  S  D  Q  S  H  Q  S  L  N  V  R  I  H  V  *  W  D  T  *  *  M  A  V  L  S  Q  V  V  L  G  F  T  S  Y  Y  V  L  F  H  F  Q  C  Q  L  E  W  *  F  S  S  Y  W  S  S  Q  F  *  S  I  I  K :   K  R  R   </second_frame>
            <third_frame>   S  Y  I  H  S  Q  V  S  T  S  F  W  E  F  W  K  S  R  A  H  Q  S  K  F  Y  I  H  *  C  N  G  L  S  P  Q  W  V  F  K  S  S  G  A  L  *  L  E  A  K  C  L  A  *  S  R  H  G  W  P  C  Q  *  F  W  H  C  K  I  V  R  C  R  G  E  F  C  S  N  K  D  N  S  N  H  W  I  I  A  P   : E  Y  G  Q  D  G  I  V  S  T  S  C  D  V  Y  S  F  G  I  L  I  D  G  D  V  Y  K  N  Q  T  R  *  *  K  I  Y  W  R  V  E  H  T  T  L  G  *  *  F  F  S  R  *  D  S  *  G  G  G  C  *  F  G  T  A  *  G  M  N  E  L  T  Q  R  C  S  V  C  C  L  L  *  S  *  L  *  A  V  L  *  Q  H  L  M  Q  E  L  V  W  K  I  L  F  Q  H  F  K  I  S  G  S  S  L  S  I  V  A  T  E  K  S  N  *  R  I  *  Y  R  K  K  Q  L  A  W  *  W  Q  G  L  Q  C  T  I  G  G  C  I  Q  K  F  *  Y  R  R  M  *  N  L  T  K  V  I  K  A  L  M  L  E  Y  M  S  S  G  T  L  D  K  W  L  Y  S  H  K  L  F  L  D  L  L  H  I  M  Y  S  F  T  F  S  A  S  W  N  G  D  F  L  A  T  G  V  H  N  S  N  P  *  L   : R  K  G  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76155" stop="75763"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AYDVGLVILFQMRFIRWWMLIWYSLGDERIDAKMQCLLSIIELALSCTLATPDARISMEDSLSTLQNIRLQFVNSRHRKKQLKDLVPKKATCLVMARSTMYNWRVHSKVLIQKNVKSDQSHQSLNVRIHV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76647" stop="76387"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YHTYIVKFQPAFGNSGSHVLIKVNFIYTDATVYLHNGCSNPVVHCDLKPSVLLDQDMVGHVSDFGIAKLLGAGESFVQTRTIATIG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="77683" e_stop="76987"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="77683" e_stop="76987" e_length="697"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77683" stop="76987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548594" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77682" stop="77159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299724" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTTTTCATTTGGCTTTTTGTGTGATTAAAACGCATGGTAGATTTTGTAATTATGTATTATTTTGCATTGTTATGAAAAGAAAAATTCTTTATTTTCGTGTTAAACTTTCAAGTGTTATTTAACTGACAAAATTTCTATTTATACATGATGAGTTTGATAATATTTGAATGTTTTATGCATAATAGTGATGTTAGGGGAAATATATATATTCGTGATATTCACGTGCTTTGTCGAGAACTAGTGCATCATTAATAAGAGTAAGTTTTTCTCGTGAAGCATTTGGCTTTTTGGTTGATTAAAACGCATGGTAGATTTTGTATAACTTTCCATATAAACTTCCTGAAAGCTTTCAAATGCTCCTTTTTTATGTATGAATTTATTTCTAAAAAATGGCTCTGTCCCTGTTGAATCAAGGAGGTTAACATCGAAGCTTAGATATAAGAAAGAACTGTTGTCTGCCTGCCTGCATATTGGTATTTTCTTTTCTTTGTTTTGAATTCATGTCCATTTTCAGTCTCTTCTGAGTATTAAGTAAGTTGGCATCTCTGTTTTATGTATGCTGAGATTGTCCAATGAACCAAATGATTGGGGATATATAGCTATGTATCATCTTCTATATCACTAAGTTAAGGGATGTATCTTCTTTATCACTAAGTTAAGGGTAAGACTCAGTTTTCTTTCTTTAATCGCTATTG</gDNA_template>
            <first_frame> S  F  S  F  G  F  L  C  D  *  N  A  W  *  I  L  *  L  C  I  I  L  H  C  Y  E  K  K  N  S  L  F  S  C  *  T  F  K  C  Y  L  T  D  K  I  S  I  Y  T  *  *  V  *  *  Y  L  N  V  L  C  I  I  V  M  L  G  E  I  Y  I  F  V  I  F  T  C  F  V  E  N  *  C  I  I  N  K  S  K  F  F  S  *  S  I  W  L  F  G  *  L  K  R  M  V  D  F  V  *  L  S  I  *  T  S  *  K  L  S  N  A  P  F  L  C  M  N  L  F  L  K  N  G  S  V  P  V  E  S  R  R  L  T  S  K  L  R  Y  K  K  E  L  L  S  A  C  L  H  I  G  I  F  F  S  L  F  *  I  H  V  H  F  Q  S  L  L  S  I  K  *  V  G  I  S  V  L  C  M  L  R  L  S  N  E  P  N  D  W  G  Y  I  A  M  Y  H  L  L  Y  H  *  V  K  G  C  I  F  F  I  T  K  L  R  V  R  L  S  F  L  S  L  I  A  I  </first_frame>
            <second_frame>  V  F  H  L  A  F  C  V  I  K  T  H  G  R  F  C  N  Y  V  L  F  C  I  V  M  K  R  K  I  L  Y  F  R  V  K  L  S  S  V  I  *  L  T  K  F  L  F  I  H  D  E  F  D  N  I  *  M  F  Y  A  *  *  *  C  *  G  K  Y  I  Y  S  *  Y  S  R  A  L  S  R  T  S  A  S  L  I  R  V  S  F  S  R  E  A  F  G  F  L  V  D  *  N  A  W  *  I  L  Y  N  F  P  Y  K  L  P  E  S  F  Q  M  L  L  F  Y  V  *  I  Y  F  *  K  M  A  L  S  L  L  N  Q  G  G  *  H  R  S  L  D  I  R  K  N  C  C  L  P  A  C  I  L  V  F  S  F  L  C  F  E  F  M  S  I  F  S  L  F  *  V  L  S  K  L  A  S  L  F  Y  V  C  *  D  C  P  M  N  Q  M  I  G  D  I  *  L  C  I  I  F  Y  I  T  K  L  R  D  V  S  S  L  S  L  S  *  G  *  D  S  V  F  F  L  *  S  L  L </second_frame>
            <third_frame>   F  F  I  W  L  F  V  *  L  K  R  M  V  D  F  V  I  M  Y  Y  F  A  L  L  *  K  E  K  F  F  I  F  V  L  N  F  Q  V  L  F  N  *  Q  N  F  Y  L  Y  M  M  S  L  I  I  F  E  C  F  M  H  N  S  D  V  R  G  N  I  Y  I  R  D  I  H  V  L  C  R  E  L  V  H  H  *  *  E  *  V  F  L  V  K  H  L  A  F  W  L  I  K  T  H  G  R  F  C  I  T  F  H  I  N  F  L  K  A  F  K  C  S  F  F  M  Y  E  F  I  S  K  K  W  L  C  P  C  *  I  K  E  V  N  I  E  A  *  I  *  E  R  T  V  V  C  L  P  A  Y  W  Y  F  L  F  F  V  L  N  S  C  P  F  S  V  S  S  E  Y  *  V  S  W  H  L  C  F  M  Y  A  E  I  V  Q  *  T  K  *  L  G  I  Y  S  Y  V  S  S  S  I  S  L  S  *  G  M  Y  L  L  Y  H  *  V  K  G  K  T  Q  F  S  F  F  N  R  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0101G09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="80336" e_stop="80126"/>
            <exon e_start="78419" e_stop="78393"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.854" acc_prob="0.987" e_score="0.938"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="80336" e_stop="80126" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.854" acc_prob="0.987">
            <gDNA_intron_boundary i_start="80125" i_stop="78420" i_length="1706"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="78419" e_stop="78393" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80336" stop="80126"/>
              <exon start="78419" stop="78393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243333" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATTCCCCTCTCAATGAATTTCCCAATTCCCCATTCAATTTTACTTCTTTTTGGATAAAAAATAATAAGTGTTTGTGTGTGTATGCAGCAGACAATAATGGCGAAGATGAAGGTGGTGAGGAGTGAAATTGCTGCGAAACAAGTGGTTGTGATCGAGGAAAATGAGGAGATACATTGGTATGCTTCTTGAATTTCGTCCGGAGGACACAG : CTACTCAAATCCAAATGCAAAGGATCT</gDNA_template>
            <first_frame> Q  F  P  S  Q  *  I  S  Q  F  P  I  Q  F  Y  F  F  L  D  K  K  *  *  V  F  V  C  V  C  S  R  Q  *  W  R  R  *  R  W  *  G  V  K  L  L  R  N  K  W  L  *  S  R  K  M  R  R  Y  I  G  M  L  L  E  F  R  P  E  D  T   : A  T  Q  I  Q  M  Q  R  I  </first_frame>
            <second_frame>  N  S  P  L  N  E  F  P  N  S  P  F  N  F  T  S  F  W  I  K  N  N  K  C  L  C  V  Y  A  A  D  N  N  G  E  D  E  G  G  E  E  *  N  C  C  E  T  S  G  C  D  R  G  K  *  G  D  T  L  V  C  F  L  N  F  V  R  R  T  Q  :  L  L  K  S  K  C  K  G  S </second_frame>
            <third_frame>   I  P  L  S  M  N  F  P  I  P  H  S  I  L  L  L  F  G  *  K  I  I  S  V  C  V  C  M  Q  Q  T  I  M  A  K  M  K  V  V  R  S  E  I  A  A  K  Q  V  V  V  I  E  E  N  E  E  I  H  W  Y  A  S  *  I  S  S  G  G  H  S :   Y  S  N  P  N  A  K  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0101G09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="75634" PGL_stop="75970"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75634" e_stop="75970"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="75634" e_stop="75970" e_length="337"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75634" stop="75970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205032" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGATTAGAATTGTGAACTCCAGTAGCTAGAAAATCACCATTCCAGCTGGCACTGAAAGTGAAAGAGTACATAATATGAAGTAAATCCAAGAACAACTTGTGAGAGTACAGCCATTTATCAAGTGTCCCACTAGACATGTATTCTAACATTAAGGCTTTGATGACTTTGGTCAGATTTCACATTCTTCTGTATCAAAACTTTTGAATGCACCCTCCAATTGTACATTGTAGACCTTGCCATTACCAAGCAAGTTGCTTTTTTCGGTACTAAATCCTTCAGTTGCTTTTTTCGGTGGCGACTATTGACAAACTGGAGCCTGATATTTTGAAGTGTTGAA</gDNA_template>
            <first_frame> G  L  E  L  *  T  P  V  A  R  K  S  P  F  Q  L  A  L  K  V  K  E  Y  I  I  *  S  K  S  K  N  N  L  *  E  Y  S  H  L  S  S  V  P  L  D  M  Y  S  N  I  K  A  L  M  T  L  V  R  F  H  I  L  L  Y  Q  N  F  *  M  H  P  P  I  V  H  C  R  P  C  H  Y  Q  A  S  C  F  F  R  Y  *  I  L  Q  L  L  F  S  V  A  T  I  D  K  L  E  P  D  I  L  K  C  *  </first_frame>
            <second_frame>  D  *  N  C  E  L  Q  *  L  E  N  H  H  S  S  W  H  *  K  *  K  S  T  *  Y  E  V  N  P  R  T  T  C  E  S  T  A  I  Y  Q  V  S  H  *  T  C  I  L  T  L  R  L  *  *  L  W  S  D  F  T  F  F  C  I  K  T  F  E  C  T  L  Q  L  Y  I  V  D  L  A  I  T  K  Q  V  A  F  F  G  T  K  S  F  S  C  F  F  R  W  R  L  L  T  N  W  S  L  I  F  *  S  V  E </second_frame>
            <third_frame>   I  R  I  V  N  S  S  S  *  K  I  T  I  P  A  G  T  E  S  E  R  V  H  N  M  K  *  I  Q  E  Q  L  V  R  V  Q  P  F  I  K  C  P  T  R  H  V  F  *  H  *  G  F  D  D  F  G  Q  I  S  H  S  S  V  S  K  L  L  N  A  P  S  N  C  T  L  *  T  L  P  L  P  S  K  L  L  F  S  V  L  N  P  S  V  A  F  F  G  G  D  Y  *  Q  T  G  A  *  Y  F  E  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0101G09.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="107161" PGL_stop="106388"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107161" e_stop="106388"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="107161" e_stop="106388" e_length="774"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107161" stop="106388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107069" stop="106410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697589" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATCCAACCTATCTTCTAATTCCCTCTATATAAAATCTCCTTATAAAAAAGAGCACCCCCTTTATCTCTATACTGACAAAAAACCAAGAGAAATGGACAATAAGTTTCATTTTTTTCATTATCTCCATTTCTTCTTGCTTCTATCTTCATCTTGCTTTTCACTTGTTGCCTTCTCTTGGATTCCATATAATGAAAACAAGAACTATGAAGGCTCCTCTGATCTTGTTAATCTTGAATACCATATGGGACCTGTTCTTTCTTCTCCTATTAAACTTTATGTGATATGGTATGGCCATTGGAACCCTTCTCATCAAGCCACAATTAGAGACTTTCTTAACTCCTTTTCATCTTCTTATGCACCTCATCCTTCTGTAGCTGATTGGTGGCGAACCGTTCGTCTTTACACAGATCAAACTGGCCAAAACATCTCAACTATTTCACTTTCTGGTGAATTCTTTGACTATAAGTACTCACAAGGGAAGTACCTTAGCAGATTATCAATGCAATATGTGATCAAGAATGCAGTAAGATCATACCGTGAATCTATACCGTTAAATTATAAGAATGGAGTTTACTTAGTGTTAACATCTTATGATGTTCAAGTTCAAGAATTTTGTAGGGCTGTATGTGGTTTCCATTACTTTACATTTCCATCAATTCTTGGAGTGACAGTCCCTTATGCTTGGATTGGTTATAGTGGGAAACAATGTCCTGGTTTCTGTGCTTATCCTTTTGCTTGGCCTAAGAATTCAGGGAAGCCACCACCAAACACAA</gDNA_template>
            <first_frame> N  P  T  Y  L  L  I  P  S  I  *  N  L  L  I  K  K  S  T  P  F  I  S  I  L  T  K  N  Q  E  K  W  T  I  S  F  I  F  F  I  I  S  I  S  S  C  F  Y  L  H  L  A  F  H  L  L  P  S  L  G  F  H  I  M  K  T  R  T  M  K  A  P  L  I  L  L  I  L  N  T  I  W  D  L  F  F  L  L  L  L  N  F  M  *  Y  G  M  A  I  G  T  L  L  I  K  P  Q  L  E  T  F  L  T  P  F  H  L  L  M  H  L  I  L  L  *  L  I  G  G  E  P  F  V  F  T  Q  I  K  L  A  K  T  S  Q  L  F  H  F  L  V  N  S  L  T  I  S  T  H  K  G  S  T  L  A  D  Y  Q  C  N  M  *  S  R  M  Q  *  D  H  T  V  N  L  Y  R  *  I  I  R  M  E  F  T  *  C  *  H  L  M  M  F  K  F  K  N  F  V  G  L  Y  V  V  S  I  T  L  H  F  H  Q  F  L  E  *  Q  S  L  M  L  G  L  V  I  V  G  N  N  V  L  V  S  V  L  I  L  L  L  G  L  R  I  Q  G  S  H  H  Q  T  Q </first_frame>
            <second_frame>  I  Q  P  I  F  *  F  P  L  Y  K  I  S  L  *  K  R  A  P  P  L  S  L  Y  *  Q  K  T  K  R  N  G  Q  *  V  S  F  F  S  L  S  P  F  L  L  A  S  I  F  I  L  L  F  T  C  C  L  L  L  D  S  I  *  *  K  Q  E  L  *  R  L  L  *  S  C  *  S  *  I  P  Y  G  T  C  S  F  F  S  Y  *  T  L  C  D  M  V  W  P  L  E  P  F  S  S  S  H  N  *  R  L  S  *  L  L  F  I  F  L  C  T  S  S  F  C  S  *  L  V  A  N  R  S  S  L  H  R  S  N  W  P  K  H  L  N  Y  F  T  F  W  *  I  L  *  L  *  V  L  T  R  E  V  P  *  Q  I  I  N  A  I  C  D  Q  E  C  S  K  I  I  P  *  I  Y  T  V  K  L  *  E  W  S  L  L  S  V  N  I  L  *  C  S  S  S  R  I  L  *  G  C  M  W  F  P  L  L  Y  I  S  I  N  S  W  S  D  S  P  L  C  L  D  W  L  *  W  E  T  M  S  W  F  L  C  L  S  F  C  L  A  *  E  F  R  E  A  T  T  K  H   </second_frame>
            <third_frame>   S  N  L  S  S  N  S  L  Y  I  K  S  P  Y  K  K  E  H  P  L  Y  L  Y  T  D  K  K  P  R  E  M  D  N  K  F  H  F  F  H  Y  L  H  F  F  L  L  L  S  S  S  C  F  S  L  V  A  F  S  W  I  P  Y  N  E  N  K  N  Y  E  G  S  S  D  L  V  N  L  E  Y  H  M  G  P  V  L  S  S  P  I  K  L  Y  V  I  W  Y  G  H  W  N  P  S  H  Q  A  T  I  R  D  F  L  N  S  F  S  S  S  Y  A  P  H  P  S  V  A  D  W  W  R  T  V  R  L  Y  T  D  Q  T  G  Q  N  I  S  T  I  S  L  S  G  E  F  F  D  Y  K  Y  S  Q  G  K  Y  L  S  R  L  S  M  Q  Y  V  I  K  N  A  V  R  S  Y  R  E  S  I  P  L  N  Y  K  N  G  V  Y  L  V  L  T  S  Y  D  V  Q  V  Q  E  F  C  R  A  V  C  G  F  H  Y  F  T  F  P  S  I  L  G  V  T  V  P  Y  A  W  I  G  Y  S  G  K  Q  C  P  G  F  C  A  Y  P  F  A  W  P  K  N  S  G  K  P  P  P  N  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0101G09.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107159" stop="106389"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNLSSNSLYIKSPYKKEHPLYLYTDKKPREMDNKFHFFHYLHFFLLLSSSCFSLVAFSWIPYNENKNYEGSSDLVNLEYHMGPVLSSPIKLYVIWYGHWNPSHQATIRDFLNSFSSSYAPHPSVADWWRTVRLYTDQTGQNISTISLSGEFFDYKYSQGKYLSRLSMQYVIKNAVRSYRESIPLNYKNGVYLVLTSYDVQVQEFCRAVCGFHYFTFPSILGVTVPYAWIGYSGKQCPGFCAYPFAWPKNSGKPPPNT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 130 chains have been computed
$ 
$ memory statistics:
$ 394232 bytes spliced alignments in total
$ 93 spliced alignments have been stored
$ 4239 bytes was the average size of a spliced alignment
$ 24824 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1654 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 148 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 01:44:54
-->
