<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:04:11"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598563" ref_strand="+" ref_description="SGN-U598563 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tgcccaaaaaaattaaaacctctcccatgcatgcaattagcccccccacgcacgcaaagataaaaagccaacaatcattcatctccacaaaaagctaccttccatttccccacccaaagttttcagagccattcaacagctcttctattaaagcacactaaaaaccctcacgccaatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="4612" stop="5392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4912" g_stop="5092" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U598563" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>181</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4912" e_stop="5092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCCAAAAAAATTAAAACCTCTCCCATGCATGCAATTAGCCCCCCCACGCACGCAAAGATAAAAAGCCAACAATCATTCATCTCCACAAAAAGCTACCTTCCATTTCCCCACCCAAAGTTTTCAGAGCCATTCAACAGCTCTTCTATTAAAGCACACTAAAAACCCTCACGCCAATACTT</genome_strand>
        <mrna_strand>TGCCCAAAAAAATTAAAACCTCTCCCATGCATGCAATTAGCCCCCCCACGCACGCAAAGATAAAAAGCCAACAATCATTCATCTCCACAAAAAGCTACCTTCCATTTCCCCACCCAAAGTTTTCAGAGCCATTCAACAGCTCTTCTATTAAAGCACACTAAAAACCCTCACGCCAATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567228" ref_strand="+" ref_description="SGN-U567228 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|9858782|gb|AAG01129.1|AF273333_14 (e_value=0) BAC19.14; (*ATH) AT4G36710.1 (e_value=6e-86) | Symbol: None | scarecrow transcription factor family protein | chr4:17305762-17307647 FORWARD | Aliases: AP22.56, AP22_56; (*SWP) sp|Q5NE24|NSP2_MEDTR (e_value=4e-19) Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2; ">
      <seq>gagactttggatacggctaaaaacaattctctccttttttcagagaaatgaaagtgcccttttccactaatgataacgtaagttctaagccattggttaacagcaacaacagctttacttttccagccgctaccaacggttctaatttgtgctacgaacctaagtcagtgctcgagctccgtcgtagcccaagtcctatagttgataagcagattataacaacgaatcctgatttgtctgctctttgtggtggtgaagatcctcttcaattaggagatcatgttctgagtaactttgaagattgggattctttgatgagagaacttggcttgcacgacgattctgcttcgctttcaaaaacgaatcctctcacccacagcgaatcgctgactcagttccataatctctccgagttttcagctgaatcgaatcagtttcctagtcctgatttttctttctcagacactaatttccctcagcagtttccgacggtgaatcaggcaagtttcatcaacgcccttgatctctccggggatatccaccagaattggagcgtaggatttgattatgtggatgaactcattcgttttgctgagtgtttcgaaacaaacgctttccaactcgcacatgtgatactggcacgcctcaatcaacggctcagatccgcagcaggaaaacctctccaacgagctgccttttacttcaaggaagcacttcaagcgcagctcgccggatcagctcggcaaactcgttcttcaagttcctccgacgtaattcaaacgattaaatcttataaaatattgtcaaatatttctccgatccctatgttctctagcttcacggcgaatcaagccgtgcttgaggcagttgacggctccatgctagtccacgtcatcgatttcgacatcggacttggtggtcactgggcttccttcatgaaagagttagccgacaaagccgagtgccgtaaagccaacgcgccgatccttagaattacggctctagttcctgaagagtacgctgtggaatcaaggttaattagagaaaatttaacccaatttgctcgtgaactcaatatcggtttcgaaattgattttgtcctaattcgtacattcgaattgttatccttcaaagcgataaagttcatggagggagagaagacagcggtgcttttatctcccgctatcttccgacgggtcgggtcagggtttgtaaatgaactccgtcgaatatcccctaacgtggtggtacacgtggacagcgaaggacttatgggttacggtgcaatgtctttccggcagacagtaatcgacgggctggaattttactctacactactggaatcactggaggcagcaaatatcggtggtggaaattgcggggattggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="4841" stop="6831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5141" g_stop="6531" g_length="1391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1391" r_length="1391" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U567228" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1391</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5141" e_stop="6531"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGACTTTGGATACGGCTAACAACAATTCTCTCCTTTTTTCAGAGAAATGAAAGTGCCCTTTTCCACTAATGATAACGTAAGTTCTAAGCCATTGGTTAACAGCAACAACAGCTTTACTTTTCCAGCCGCTACCAACGGTTCTAATTTGTGCTACGAACCTAAGTCAGTGCTCGAGCTCCGTCGTAGCCCAAGTCCTATAGTTGATAAGCAGATTATAACAACGAATCCTGATTTGTCTGCTCTTTGTGGTGGTGAAGATCCTCTTCAATTAGGAGATCATGTTCTGAGTAACTTTGAAGATTGGGATTCTTTGATGAGAGAACTTGGCTTGCACGACGATTCTGCTTCGCTTTCAAAAACGAATCCTCTCACCCACAGCGAATCGCTGACTCAGTTCCATAATCTCTCCGAGTTTTCAGCTGAATCGAATCAGTTTCCTAGTCCTGATTTTTCTTTCTCAGACACTAATTTCCCTCAGCAGTTTCCGACGGTGAATCAGGCAAGTTTCATCAACGCCCTTGATCTCTCCGGGGATATCCACCAGAATTGGAGCGTAGGATTTGATTATGTGGATGAACTCATTCGTTTTGCTGAGTGTTTCGAAACAAACGCTTTCCAACTCGCACATGTGATACTGGCACGCCTCAATCAACGGCTCAGATCCGCAGCAGGAAAACCTCTCCAACGAGCTGCCTTTTACTTCAAGGAAGCACTTCAAGCGCAGCTCGCCGGATCAGCTCGGCAAACTCGTTCTTCAAGTTCCTCCGACGTAATTCAAACGATTAAATCTTATAAAATATTGTCAAATATTTCTCCGATCCCTATGTTCTCTAGCTTCACGGCGAATCAGGCCGTGCTTGAGGCAGTTGACGGCTCCATGCTAGTCCACGTCATCGATTTCGACATCGGACTTGGTGGTCACTGGGCTTCCTTCATGAAAGAGTTAGCCGACAAAGCCGAGTGCCGTAAAGCCAACGCGCCGATCCTTAGAATTACGGCTCTAGTTCCTGAAGAGTACGCTGTGGAATCAAGGTTAATTAGAGAAAATTTAACCCAATTTGCTCGTGAACTCAATATCGGTTTCGAAATTGATTTTGTCCTAATTCGTACATTCGAATTGTTATCCTTCAAAGCGATAAAGTTCATGGAGGGAGAGAAGACAGCGGTGCTTTTATCTCCCGCTATCTTCCGACGGGTCGGGTCAGGGTTTGTAAATGAACTCCGTCGAATATCCCCTAACGTGGTGGTACACGTGGACAGCGAAGGACTTATGGGTTACGGTGCAATGTCTTTCCGGCAGACAGTAATCGACGGGCTGGAATTTTACTCTACACTACTGGAATCACTGGAGGCAGCAAATATCGGTGGTGGAAATTGCGGGGATTGGATG</genome_strand>
        <mrna_strand>GAGACTTTGGATACGGCTAAAAACAATTCTCTCCTTTTTTCAGAGAAATGAAAGTGCCCTTTTCCACTAATGATAACGTAAGTTCTAAGCCATTGGTTAACAGCAACAACAGCTTTACTTTTCCAGCCGCTACCAACGGTTCTAATTTGTGCTACGAACCTAAGTCAGTGCTCGAGCTCCGTCGTAGCCCAAGTCCTATAGTTGATAAGCAGATTATAACAACGAATCCTGATTTGTCTGCTCTTTGTGGTGGTGAAGATCCTCTTCAATTAGGAGATCATGTTCTGAGTAACTTTGAAGATTGGGATTCTTTGATGAGAGAACTTGGCTTGCACGACGATTCTGCTTCGCTTTCAAAAACGAATCCTCTCACCCACAGCGAATCGCTGACTCAGTTCCATAATCTCTCCGAGTTTTCAGCTGAATCGAATCAGTTTCCTAGTCCTGATTTTTCTTTCTCAGACACTAATTTCCCTCAGCAGTTTCCGACGGTGAATCAGGCAAGTTTCATCAACGCCCTTGATCTCTCCGGGGATATCCACCAGAATTGGAGCGTAGGATTTGATTATGTGGATGAACTCATTCGTTTTGCTGAGTGTTTCGAAACAAACGCTTTCCAACTCGCACATGTGATACTGGCACGCCTCAATCAACGGCTCAGATCCGCAGCAGGAAAACCTCTCCAACGAGCTGCCTTTTACTTCAAGGAAGCACTTCAAGCGCAGCTCGCCGGATCAGCTCGGCAAACTCGTTCTTCAAGTTCCTCCGACGTAATTCAAACGATTAAATCTTATAAAATATTGTCAAATATTTCTCCGATCCCTATGTTCTCTAGCTTCACGGCGAATCAAGCCGTGCTTGAGGCAGTTGACGGCTCCATGCTAGTCCACGTCATCGATTTCGACATCGGACTTGGTGGTCACTGGGCTTCCTTCATGAAAGAGTTAGCCGACAAAGCCGAGTGCCGTAAAGCCAACGCGCCGATCCTTAGAATTACGGCTCTAGTTCCTGAAGAGTACGCTGTGGAATCAAGGTTAATTAGAGAAAATTTAACCCAATTTGCTCGTGAACTCAATATCGGTTTCGAAATTGATTTTGTCCTAATTCGTACATTCGAATTGTTATCCTTCAAAGCGATAAAGTTCATGGAGGGAGAGAAGACAGCGGTGCTTTTATCTCCCGCTATCTTCCGACGGGTCGGGTCAGGGTTTGTAAATGAACTCCGTCGAATATCCCCTAACGTGGTGGTACACGTGGACAGCGAAGGACTTATGGGTTACGGTGCAATGTCTTTCCGGCAGACAGTAATCGACGGGCTGGAATTTTACTCTACACTACTGGAATCACTGGAGGCAGCAAATATCGGTGGTGGAAATTGCGGGGATTGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574396" ref_strand="+" ref_description="SGN-U574396 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|156070801|gb|ABU45213.1| (e_value=7e-160) unknown; (*ATH) AT4G36730.1 (e_value=6e-71) | Symbol: None | G-box binding factor 1 (GBF1), identical to G-box binding factor 1 SP:P42774 from (Arabidopsis thaliana); contains Pfam profile: PF00170 bZIP transcription factor | chr4:17309623-17312480 REVERSE | Aliases: AP22.21, AP22_21; (*SWP) sp|P42774|GBF1_ARATH (e_value=6e-70) G-box-binding factor 1 OS=Arabidopsis thaliana GN=GBF1; ">
      <seq>tattttgactaaaccgtcttctttctttcttcaaagtttcaaacccaagaaccaagattctgttttctttatggctgctctttgtttaggataatttttttcttcttaaatctctttgggggtgggataaaaaacttaactttttggaaaatccgacttggaaccttcttgttccacctcagattcactacacagcctttcgctgagcaagccatttttggattattcccgtggatacctgcatatacaattgattgacccaatgggagctggggaagagagcactcctacaaagacttcaaagcctcctttaactcaggagacaccaaccgcaccttcatatcctgattggtcaagctctatgcaggcttattatagtgctggagctactcctcctttttttgcctcacctgttgcttctcctgctccccacccatacatgtggggaggtcagcatcctcttatgcctccttatgggactccagttccatatccagctttatatcctcctgccggagtttatgctcatcctaacattgccacgccggctccaaattctgtgccggcaaatcctgaagcagatgggaaggggcctgaaggaaaggatcggaattcaagtaaaaagttaaaggtctgttctggtggtaaggcaggcgacaatgggaaagttacttcaggttccggaaatgatggtgccacacaaagtgatgaaagcagaagtgaaggtacatcagatacaaatgatgaaaatgataacaatgaatttgctgcaaacaagaagggaagctttgatcaaatgcttcgagatggagccagtgcacagaataatcctgcgaaagagaatcacccgacttctatacatggaatctgtaccatgcctgcaactaacctaaatattggaatggacgtgtggaatgcatcagctgccggtcctggagcgatcaaaatacagcaaaatgcaactggtccagttataggacatgaaggaaggatgaatgatcagtggattcaggaggaacgtgaacttaaaaggcaaaagagaaagcaatctaatagggagtcagctaggaggtcgaggctccgcaagcaggcagagtgtgaagagctacaacgtagagtagaagctttgagccatgagaatcattcactcaaagatgagctccaacggctctctgaggaatgtgagaagcttacctcggagaataatttaattaaggaagagttaacgctactttgtggaccagacgttgtgtctaagctggagagaaacgataatgtcacacgtattcaatctaatgttgaagaagctagttaaggagaagtggaaaagccaggactgagtaggtgatttttggttacaaagtgctcacagatcattgcctttttggttacaaagtgctcacagatcattgcctttttggtgcagtgtttgttgtcctactaacctataccctcctttaactcccttctgagtatgactgtaacatatatttcttatgattctaaccccagtgttaaaagagtcttgagtctgtttaacttagtctttaaattaacttcagtagctcagaaagtcttcaagtgaatgttaacgaggcacccaaccacatgggttgtggtaccctggtggaattgctttagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="-" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="17861" stop="7071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17561" g_stop="17367" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="195" r_length="195" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17366" i_stop="13165" i_length="4202">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13164" g_stop="13041" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="319" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13040" i_stop="12906" i_length="135">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12905" g_stop="12858" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="367" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12857" i_stop="12772" i_length="86">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12771" g_stop="12685" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="454" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="12684" i_stop="12570" i_length="115">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.631" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12569" g_stop="12480" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="544" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12479" i_stop="12353" i_length="127">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="12352" g_stop="12192" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="705" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="12191" i_stop="12108" i_length="84">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="12107" g_stop="12053" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="760" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="12052" i_stop="11920" i_length="133">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="11919" g_stop="11871" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="809" r_length="49" r_score="0.959"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="11870" i_stop="11789" i_length="82">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="11788" g_stop="11583" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="810" r_stop="1012" r_length="203" r_score="0.985"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="11582" i_stop="10773" i_length="810">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="10772" g_stop="10695" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1013" r_stop="1090" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="10694" i_stop="8175" i_length="2520">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="8174" g_stop="8049" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1091" r_stop="1216" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="8048" i_stop="7767" i_length="282">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.769" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="7766" g_stop="7371" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="1217" r_stop="1645" r_length="429" r_score="0.826"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="-" ref_id="SGN-U574396" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>1615</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17561" e_stop="17367"/>
          <exon e_start="13164" e_stop="13041"/>
          <exon e_start="12905" e_stop="12858"/>
          <exon e_start="12771" e_stop="12685"/>
          <exon e_start="12569" e_stop="12480"/>
          <exon e_start="12352" e_stop="12192"/>
          <exon e_start="12107" e_stop="12053"/>
          <exon e_start="11919" e_stop="11871"/>
          <exon e_start="11788" e_stop="11583"/>
          <exon e_start="10772" e_stop="10695"/>
          <exon e_start="8174" e_stop="8049"/>
          <exon e_start="7766" e_stop="7371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTGACTAAACCGTCTTCTTTCTTTCTTCAAAGTTTCAAACCCAAGAACCAAGATTCTGTTTTCTTTATGGCTGCTCTTTGTTTAGGATAATTTTTTTCTTCTTAAATCTCTTTGGGGGTGGGATAACAAACTTAACTTTTTGGAAAATCCGACTTGGAACCTTCTTGTTCCACCTCAGATTCACTACACAGGTCAGCTCTCCCCACCACCTTTACTTTCACTGTTTTTTTCTTCTTGCTTTCTAGTATTTGTTTATCAATTGTTTGATTTTGTGTTTGCTAGCACCTTAACATGCTTTTTAGTTATCAGCGGTTTTCATTCACAATGACCGACAGAATTATCCTTAAGGAATTAGATTTTAAAATTGGGATCTTTTTAGTTGTCAGGGGTTTTCTTGATTCTTGTTACTGTTGAATAGTTTTGATTTTTTTTTTTTAATTTTGGAGTTTGATGATCAATTTAGCATGTTCAAAAGGTTTCTTGAAAGTTAGTTCTTGCAATTAAGTTGGTGAATTTTGACAAAAGAAAACCCAATTCTCTGACCAGCTTTGTGTTGTGAATTAGATGCCTATGATTCAAATCTTTTTTGGGTTTAAGTAGACTTTCCAAAATTCTCCATTTGTTCCTTGGGTATAATATCTTTTGCTGTAAGCTGTGAATGACATGTTTCTTAAGCGACATTACACCGAAATTTGGTTAATCTGACTAACATTGGAAGTATTCTTTTAAGCTAGATTGATTAACCTTTATTTATCAATAAAAAGGAAATTAATACAAATTAGATGGTGTTTCTTGGTTTTGGAGGAGGAATGTGGAAATAATAGGCGCTCTTGACTATTGCGAAGTTGGTTTGTTTCCACAAAAGATCTTCCCCTGGGGGAGTTGTCAAGTATAGCCTGACTGAAATTGGTTGTGATGTTCAAGATTGTGTTTTGTTTGCTATTCAAGTTAGAATGATCCTGAGTTTAAAAAATAAGTTAGAATGATCTTTGTGATTTTAATCCTTTGTAAAACTTGATAAGTGTAACTCAACATGAACAAGCTGTGTTTTCTTTTGAGGAATCAGCTTCTAATTGAGCATCAAACACGCATCACAAATTTATTGTTTAGTAATAAAATTGATTCGGCAAAAAACCAGGGAAAATTTTACATACATTACTGCCTTTAAGAATATAAAATATTGAACTGGCCATCCACAACCTATTTTTCTACTATTTTTTTGTTTCTTTTTCTCAACTTGAAATTGTTGTATTAGTTAGACTCTGCGAGGAATGATTGCATAAGATTTTGCTTCTTCTATAATGAATTTGAATACATGCTCGTAAAATGATGTAGTTTTGCCTAGTTTTCTTTGCTATACAATGCACTTTTAATTGTTTCAACTATAATTATGTCATGTCAATAGTGGGGCGGCTTGGCGTTGGTGAGCATTTGGAAAATACATTATTTGGATATTAGGTTAAGCATTCTATTTCGTAGTGGACATTATTGCCATTTATTTGTAAGAAAAGTGAACAAAAACTGTGCCTGAAGATGGTGTACATAGATGTTGGCTATATTCTTTAAGCAAAAACACCAATATTAGGCTTAGAAAGATTTAACATCAAGAAGACATGTTTAATTTTGTCAACTGTTTTTGCAATCAGTCATTTGTGCAGGATTGGCATTCTGTTTTTGTTGCAATTCGTCTTTATGGGAATGATGTTGAAGCCATGAAAAGTATGGACTAGCAACCATTAAGGAAAAACTTGACCTTTATTAATGAATGTCATTATCTGTGTTTTGGACTTTGATTAAGACTGGGCGACGGAATGGGACGTACCGGTACCGTTCCGGTTCGTCCCGTTTCGGTTGCATACGGGACGGGATAGTCTGAACCGGTATACAGAACGGGACGGAACTGTGGTTTCGTACCGGTGTACCAGTACCGGTTCATCCCAGTTCCGGTCCGGTTCAGATCCGGTTTACTTAATATATATTAATTTTTTTATATTTTATATTGTATATAATTTATATTGTATATTTTATATTTTATGTAATTTATATTTTATATTTTATATAATTTATATTTTATATTTTATATAAATTATATCTTATATTTTATATTTTATATAAATTATGTCTTATATTTTATACTTTATATTTTATATAATTTCTAAATATGAAAATTAATTACCCACCACACCCTCCCCTTCCCTGACACTTGGCAAGCGGCAACTTTATTAAAAGCTGCCCTGCGCCCTAAGCCCCTGACCAGACCACCTGCCCCTGCTGCCCTGCAGCTTTATCAAATTAGACTTTACTTGCAAACTTAATAACAAAAAAAATTTGAAAAATATCTTTAAAATAAACTTAAGTAAAAAATTATAGTATAAATTTAAAAACTATTAATTTAAACTTAGAAAAATAAAAAAAATACATATTTTTGTAATCCCAAAAAATGTCGTCCCGTTTATCCCGTCCGTTCAAATCCAGTCCATTTCGGTTCGTTCCGGTTCTATCTCGGTATATAGTGGAACGGGAGGAACCGATTATTCGTCCCGGTAATTTCGGTCTGGTTCATCCGGTACCGGTCAACGCGTCCCGTTTCGGTCCGGTACCGGTTCGTTCCGGTCCGGTGAATCGGTTCCGGTCCATTGACCAGTCTTAACTTTGATTATGTAAATAGATACATCCAGTACTTTTCTCCAGATTCATCATGTAGCCATGTAAATGACTTTCCTTTTCTTCATTATCTGCTAGTCTACAATGTTCTCTTTTGAAGAAATCTTACCAGATAGCAATTTCTTTAAGGAAGTACTTTAATATTTTTAATAAGATTTAGTTTGAAATGAGTACACATCTTATTTACGAAATATCTCTCACTAGATTTGTGCTTCATTTTCTTTACGTTTGAGTCGCATACAGATCGTTCTGTAAGTTAAAAGATTGCTTTGCATGGCTTTGTAAATTATTTATCTTTGATGGATTTGCAACTTCTTTCATCCTTGTTACTAACATTCTTTCTCATTGTTATGGTATGCATGGTGTGTATGGTCTACTCCTAGGCAGAGAGGTTTAAAGAACTTGTCTACACCTATGTTGCACGAATTTTTTAAAATCTTTGCCACACTTGTGTCGGCACGGCATGGGTGAGAGATTCTTATTGGATTTGGTCAACTTACCTTGGGTAATTTGACCATATTCTATTATTGAGAGTATAGATTGACCATATAAAGTATGAGAATGCTTTTCCATTATGCGTGAAAAGATAAAATATTGGTGTTTGTAAGGAATGGAGTTATTAGTTTTAGTTCAATAACTCAAACTAATCGAAATATATACTTTATATGTTGTAATAAACATTTATTAGCCGCATCCCAACACCCGCATCCACATTTGAATCCATATCCCAACAACAACAATATACCTAGTAAAATCTCACCTCACAGAGTGGGGTCTAGGGAGGCTAAGGTTTATATGGACCTTACTTCCATCTGGTGGAGGTAGAGAGTCTATTTTCGGAAGACCATCATCTCAAGCAAATCAAATCAAAGTAGTAATGAAAAAGAAACATGATAGTGAAGAAAACATGGCAACTTGGATCAGTGCCCATCTTAAAATTTGTGTCATGAAGAATCCGACCTCTAGATCTGCACCCAAATTGGATTTCCGCACTTGAGTTTGATCAACATAGATTATACCAATATATTTCACAAGTGTAATTTTTCAATCATTGTATTTACATCAAGCCAACTGTAACTAATGTGGATTTGAGGCATAGTGATCTTTAGTCTTCCTTTTATGTCATAAGGTTAACTTCCTAGGCGGAATTTGTGTATCATTTGCTTACTAGAAAGCCAAAAACTGTATACTTGTTCATATGACTATGGCTCATGAATTGACAAATTTCATGCTGGCTTCAAGCCTTCACAACCTTCGTCCATTTCGATTTGGGACTGGCAATGTGAGCAATCACTTGGAAGGAAATTCTCTTGAAAGACCTATCTTCTCGTGGGATCAATGCCTCACAATGTAGACTTAGCTAAAGATATGGCAAATGGTAGAAAAGGATTCATATAGGTAATATATACTAGTAGGGAATATGATTTAGTCTTGTTGGAGAACTTCTAATATTATTTTCATTTATTACAATTACTATTATTTATATATATAAAACTTAATTTTCACTTTTATTTTTACTTGGTATGATGATAACATGAGTTGAGCTTAAAGAAATAAGTGAGGATTCAGATAGTCAAATTGAGATTGAGCATAATATTTGTTGTTGTTCCTATGACAACGAAAGAAATAATCCTTATAGATGCAAAATGGTAGGAGTTCTAACTTCTACTTATCCAAAAAAAGAAAATGGAAGAGTTTTAATTTCTTTTCCCTGTTATAATCTACCTAGCCTTTCGCTGAGCAAGCCATTTTTGGATTATTCCCGTGGATACCTGCATATACAATTGATTGACCCAATGGGAGCTGGGGAAGAGAGCACTCCTACAAAGACTTCAAAGCCTCCTTTAACTCAGGTCCCTTTCTTTCTCTTTATTGTCTTTTTTATGATTTACAGCTAATCAATCATTAAACATGTGCTATTCTGTCTCTCTCTGTGTGTGTTAATGCATGTCGGCTCACTGTTCACAAGTTTTCTAATGTTTGATCAGGAGACACCAACCGCACCTTCATATCCTGATTGGTCAAGCTCTATGCAGGTTGCTATTAATTTCATAAATGATTAAGCCAATGACATGAACGCTGATGAATAATATTTTAGTTTTCTATTTCTTTTCCTGTTTAGGCTTATTATAGTGCTGGAGCTACTCCTCCTTTTTTTGCCTCACCTGTTGCTTCTCCTGCTCCCCACCCATACATGTGGGGAGGTCAGGTAGTTGATTTTCTGTTCCTAATTTATTTGTTCTTTTTTTTTTCCGATCACTAGCTATCTCACAACCTCTGAACTCACAGTACTACTTACTCTGATCACCCATCTCATATTTCAGCATCCTCTTATGCCTCCTTATGGGACTCCAGTTCCATATCCAGCTTTATATCCTCCTGCCGGAGTTTATGCTCATCCTAACATTGCCACGGTAATCAAGCTTATCTGTAATTTATTCTTATGAATTTGAAAGCTGATGAAAGCAAGTTACCTCTTCTTCCCAAAAGAAAAAATACAAAAAGACAGATCATGCTAATATTTTGTTCACGTATTTTCAGCCGGCTCCAAATTCTGTGCCGGCAAATCCTGAAGCAGATGGGAAGGGGCCTGAAGGAAAGGATCGGAATTCAAGTAAAAAGTTAAAGGTCTGTTCTGGTGGTAAGGCAGGCGACAATGGGAAAGTTACTTCAGGTTCCGGAAATGATGGTGCCACACAAAGGTCTGATTATGAATCATATTTCTGCAAAAATTCTTCATTATGGATCATTCATGCATCTGATTGTTTTATTTTTTTCGTGAACAGTGATGAAAGCAGAAGTGAAGGTACATCAGATACAAATGATGAAAATGATAACAATGTAAGTATTCAGTCCGCCCCTGACCACTTCTTTCTTTGTTTACATGCCATGGAGATCATGAGTTTCAATTTTATCCTTACCTTGTCCCGCAATGGCTAGTTGGAACTTTTTTTGATCATATGCCATCTCACAGGAATTTGCTGCAAACAAGAAGGGAAGCTTTGATCAAATGCTTGCAGATGGTAACTTCTGTGAGCTCTCTTCTTGATTCTGCCATTATTATTATCAACAAATAATTGAGTTTCTAACTATGGTGATTATCAGGAGCCAGTGCACAGAATAATCCTGCGAAAGAGAATCACCCGACTTCTATACATGGAAATCCTGTCACCATGCCTGCAACTAACCTAAATATTGGAATGGACGTGTGGAATGCATCAGCTGCCGGTCCTGGAGCGATCAAAATACAGCAAAATGCAACTGGTCCAGTTATAGGACATGAAGGAAGGATGAATGATCAGTGGATTCAGGTACTTTTTCTTTTCTTTAGCTCTTCACTCACTGAAATCAGTACTGTCGTTGTCGTTCTTAACCAGATTTGTATATCCTTCAAATTCGCCAGTCTACCTGCTTATCGATCTTTTAAAAAGCATGCATATTCCACACATCTAGTAGCAGATGGTATTAGTGAAGGTGGAATATTTTCTGATTACACAAAGTTGTCTGTGTATCTTGATTCTTAGCACAGAGACTTCCATATTAGTGTGCAAATGAAATGGCTGAAATGACTAATTTGTGAACGAAGATCACAACCTGGAGAAAGTCATGAAAGCATCCAACACCCTGATTTTATAAGGCTTCAGATGTTTTGGTTAGTCCAAAAATAGCCTAGACTAGTAATACGCCAGAAAACTCCTGAAGAGTGAAGACATGTCAGTTTCGTTCTTTATGGGATAAAATAACCTGTTTGTAGGATACAATTTTCTAATCTAATTTATTGCCATAACAATTTCTGAACATATGGTTCATTAGTTATTAAACATGCTTCATCTTGATATTTCCATCTCTGGGTACATCAGCACCTTGTGCTGTTTTGAAGTTCATTGTTCTACTTCACGACATACCCTATCACTACATAAAAGTTACATTCATGATTATTTCAAGTAGATCAATAAATTATGTAACACTCGAGAGAGGAGAGACAACTTTTTACATCCCACATCCCTTTCATTTTTGTGTGCAAGAGGGAGTACACACTCAATGATGGCGTTATATCCTTGTCATCATCGTTTTTCCGTTTCATTTTGTTGATAAATTTCGTTATAACCCTCCCGTAACAGGAGGAACGTGAACTTAAAAGGCAAAAGAGAAAGCAATCTAATAGGGAGTCAGCTAGGAGGTCGAGGCTCCGCAAGCAGGTATGACTTAACTTTTAATAGATAATGTTACTCTTTCCATCTTTAACCAGTTAGAGTTGACTGTATGTCTTTTATTGTTAGTTCTCTTTGTGGATTTAGACTAGGGGTGGCAAATGGGCGATTCGAGCTAAATTTGGGCGGGGTTGGGCAATGCCCAACTTGTCTTTTACCTACATTTATTAGCTTATAAATTTAATAGTAATAATTCTATTTTTCTTTATAAGCAAAATAGTTGTTTTAATTTCTCCATTTTGATTGATTAACATTAGAACTTCACTGATTTCATTATTTTTTTCCTTTGTAGCTTTCACATTTAATTAGTCCAGTAATTACTTGCAGAAAAAATTGCACGAAAATTAGAACCACTCAAAAACTACATGGTTTTACTTAATTGAGAAATCTGCAGATTACTTTCAATGAATTCATCAGAAAATTTGACAATGACTTTAGTACTTCATACAAAAAATTAAAGATGACTTTCTGTTACTTCGACCGAGAAGTTTGATAATGACGACATGTATTAGATATGCTAAAGATTGTTAACTATTGAATAGATGAATTTTATTCCAGAAGGGCTCCAACTTTTTTATATTTTTATCTCTGTCTTTGTGATTTTCTAATTATTTTCTAGTTAGGTTTTTTGGGTCAATTTTGCCAACCCTAGTTCAGACTCAGACATTTGCTTGAGGCAGAGAGAGCCTTAAAATCATCCTTTTTACGCCATCATATGGCACATTGATCTTTTTGCATTGTCGTCTAGCCAGATAAACTTACATTGATGCTGCAAGTTCTTGTTTCATCCGAATCCTCAATGTCTTGTGATGATGTTTTTTCTAGTTGATGGGAACACATTTGTATCACGTTTATGAAATGGTCTCCAGCATAAATTATAAGCACCTAAGAATATGGGAATACAATTCGATGTTATATCTACATATCACATGCTCTAATCTGCAGACTGTTTTACGGCCCTAGCAACTATAACTTACTTTCTTAGTTTTTTCCTTTTCTTGCGCACCCCCCCCCCCACCCCAACAAGATCATGTGTCTCTCTTCATATTTCGATTTGTGAAGACAATGGACAATCACATGAGAGAAAAATTCGAGTTGGGGAACACAAATGAACGGATGGTATGTATAAAAATTGGAATATAATGTGAAAAAGCGACAGCAGATGCATTCATATCAAATATCAACTAAAACAGACCACTTATAGATAGTCTCCCTTAAACCACTATCTTCCTGAAGGCTGATAACCTGTTCTCAAAAGTAAGTCTATCCTAGCTATCTCCCAATCCTTTCCAAAGAGAATCTTATATCAAGTCCTAGTATAGCCTCTTTTATGGACCATTAATCAATAACATCCCAAGAATCAAGATGCTGTTACTTTACTTGAAAGTACCAACATTACATTCTTACAAGTTCTGAGTACTGAAAAACAATATGCAGCTTTATGTTTGCGGTTTTCCTCTCACCTTATAGATTTAATTGTTAATTAAAACTACTGATCCCTTCTGATGTGAAACTGTTTCCTTATGTTCCTAGCCAAACCATACTGTGTAAACGTAGGGAGTAAAAAGTATCATTTTGAGAGACATGGTTGGGCAAGTGCAGCCACTGATGTCGAATATACCCTCCTCTAACTGTCAGTTAAGATCTTGAAAACACCTTTATCCATCCTGAGTTTGATGGGTTTAACTGAATAGGAAATGGATAGACGCGTAAATACCATTATAACTTCTCATGGAATGGGGGGATTAATGCGTAACTTAGATGTATCCAACCAAAAGGATTAAGGAGAAAAATATAAGTGCAATAAGAATGCTCCTCACATCTTTACCACTATCAGTTCACCCAGATGTAGTCAGCTCTACTGTTTTCTCCTAATGATAGTTATTTGTTAAAATTAAATTGGAACAGGAAGTGATGGTAAGTGTCATCAAATTAATGCCAAGAAACCAAGGAAATAGCTGCTTTTCATTTTAGTGGAGACGCGGAAAAAGAAAGAACAGAAATCTTGGTTTGGTTCTTATTTGCCGTAGTTAAACAAACAGATTATGCTGTGAACGGATAAGTTATTATCCATTATTTGGGACCGAGGGAGAATATTCACCTACATTCGGTGTATACACTGAGACTGGTAGATTAGTGGATGATTGGAACCATTGTGAGAGTGTCACTTTCACTATAAGATAGGACAGAAATTTGTCCATGGAGTTCATCGTTGTGCATGTGGATGTTTTCTGTCATTGTATTTGACATCTCTTTAGAAAGAAGTAACAACGTGTGTTTGTAACATTTCTACCATTAGCCCATACAAAAACATGATATTCCTTTCTGTTCATGTTACAACAGCAACTAGCATTTCGATGAGACAGCAAACAAGCTGCTTTTAACTCTTGACCATTGTTCATGTGTGTTTGGTCGTTTGCTTGCACCAATTGCTGGAGAACCCAGAATGTGCTCTAAATTTCTTTTAGATCTTCTGACAGTAATGTATTACGTTGTGTATTTTCGCAGGCAGAGTGTGAAGAGCTACAACGTAGAGTAGAAGCTTTGAGCCATGAGAATCATTCACTCAAAGATGAGCTCCAACGGCTCTCTGAGGAATGTGAGAAGCTTACCTCGGAGAATAATTTAATTAAGGTACTTTACACCTTCATAAGTATTCCTCTGAACTTTTGTCCTCCTTGATTTTTCGTTCTTCTCTTTCTCAAGTACACTGTTCTTGTCATCCCCTGTTTTCTTTCCCCTCTGTGACACTGAATAGGGGCACACAGTTCTGATTCGTGAATAGCTTTTTGTTATAACAAAAATGTGAGACCGTTTATTATCATTGAATCTCTCGCTGCATACATACATTCATCGTTTTGTGAAGGTGAGAAAAATGAAATTACTGATATTTGTTGGAATATGATGGTGAAACAGGAAGAGTTAACGCTACTTTGTGGACCAGACGTTGTGTCTAAGCTGGAGAGAAACGATAATGTCACACGTATTCAATCTAATGTTGAAGAAGCTAGTTAAGGAGAAGTGGAAAAGCCAGGAC--------TGA------G-T----AG-G-T----G---A-----TTTTT-GTTACAAAGTGCTCACAGATCATTGCCTTTTTGGTGCAGTGTTTGTTGTCCTACTAACCTATACCCTCCTTTAACTCCCTTTCTGAGTATGACTGTAACATATATTTCTTATGATTCTAACCCCAGTGTTAAAAGAGTCTTGAGTCTGTTTAACTTAGTCTTTAAATTAACTTCAGTAGCTCAGAAAGTCTTCAAGTGAATGTTAACGAGGCACCCAACCACATGGGTTGTGGTACCCTGGTGGAATTGCTTTAGCTTT</genome_strand>
        <mrna_strand>TATTTTGACTAAACCGTCTTCTTTCTTTCTTCAAAGTTTCAAACCCAAGAACCAAGATTCTGTTTTCTTTATGGCTGCTCTTTGTTTAGGATAATTTTTTTCTTCTTAAATCTCTTTGGGGGTGGGATAAAAAACTTAACTTTTTGGAAAATCCGACTTGGAACCTTCTTGTTCCACCTCAGATTCACTACACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTCGCTGAGCAAGCCATTTTTGGATTATTCCCGTGGATACCTGCATATACAATTGATTGACCCAATGGGAGCTGGGGAAGAGAGCACTCCTACAAAGACTTCAAAGCCTCCTTTAACTCAG.......................................................................................................................................GAGACACCAACCGCACCTTCATATCCTGATTGGTCAAGCTCTATGCAG......................................................................................GCTTATTATAGTGCTGGAGCTACTCCTCCTTTTTTTGCCTCACCTGTTGCTTCTCCTGCTCCCCACCCATACATGTGGGGAGGTCAG...................................................................................................................CATCCTCTTATGCCTCCTTATGGGACTCCAGTTCCATATCCAGCTTTATATCCTCCTGCCGGAGTTTATGCTCATCCTAACATTGCCACG...............................................................................................................................CCGGCTCCAAATTCTGTGCCGGCAAATCCTGAAGCAGATGGGAAGGGGCCTGAAGGAAAGGATCGGAATTCAAGTAAAAAGTTAAAGGTCTGTTCTGGTGGTAAGGCAGGCGACAATGGGAAAGTTACTTCAGGTTCCGGAAATGATGGTGCCACACAAAG....................................................................................TGATGAAAGCAGAAGTGAAGGTACATCAGATACAAATGATGAAAATGATAACAAT.....................................................................................................................................GAATTTGCTGCAAACAAGAAGGGAAGCTTTGATCAAATGCTTCGAGATG..................................................................................GAGCCAGTGCACAGAATAATCCTGCGAAAGAGAATCACCCGACTTCTATACATGG-AAT-CTGT-ACCATGCCTGCAACTAACCTAAATATTGGAATGGACGTGTGGAATGCATCAGCTGCCGGTCCTGGAGCGATCAAAATACAGCAAAATGCAACTGGTCCAGTTATAGGACATGAAGGAAGGATGAATGATCAGTGGATTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAACGTGAACTTAAAAGGCAAAAGAGAAAGCAATCTAATAGGGAGTCAGCTAGGAGGTCGAGGCTCCGCAAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAGTGTGAAGAGCTACAACGTAGAGTAGAAGCTTTGAGCCATGAGAATCATTCACTCAAAGATGAGCTCCAACGGCTCTCTGAGGAATGTGAGAAGCTTACCTCGGAGAATAATTTAATTAAG..........................................................................................................................................................................................................................................................................................GAAGAGTTAACGCTACTTTGTGGACCAGACGTTGTGTCTAAGCTGGAGAGAAACGATAATGTCACACGTATTCAATCTAATGTTGAAGAAGCTAGTTAAGGAGAAGTGGAAAAGCCAGGACTGAGTAGGTGATTTTTGGTTACAAAGTGCTCACAGATCATTGCCTTTTTGGTTACAAAGTGCTCACAGATCATTGCCTTTTTGGTGCAGTGTTTGTTGTCCTACTAACCTATACCCTCCTTTAACTCCC-TTCTGAGTATGACTGTAACATATATTTCTTATGATTCTAACCCCAGTGTTAAAAGAGTCTTGAGTCTGTTTAACTTAGTCTTTAAATTAACTTCAGTAGCTCAGAAAGTCTTCAAGTGAATGTTAACGAGGCACCCAACCACATGGGTTGTGGTACCCTGGTGGAATTGCTTTAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563285" ref_strand="+" ref_description="SGN-U563285 Tomato 200607#2 [24 ESTs aligned] (*GB) gi|157348182|emb|CAO22892.1| (e_value=1e-59) unnamed; (*ATH) AT4G36740.1 (e_value=1e-57) | Symbol: None | homeobox-leucine zipper family protein, similar to CRHB7 (GP:3868841) {Ceratopteris richardii} and to homeotic protein VAHOX1 (PIR:T07734) (Lycopersicon esculentum) | chr4:17314653-17316318 REVERSE | Aliases: AP22.8, AP22_8, HB-5; (*SWP) sp|O23208|ATB40_ARATH (e_value=4e-57) Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40; ">
      <seq>agcaccttagtcttcactccatctatataatttttttttcccttcaaaataaataaataaaagtcttctccatttcacttttacaccacaaaaaataaataaaaatataaacaccatgaaccatcaggttatagaagatgataatatggtacttatttcccagtactatcctgatatttacacccaacttgtaccacaacaaggagagtcaaagccgcggagaagacgtaagaagaacaaattaggagaagggagtgggaatgatcaaatgatgatgatgaggaagaggaagttaagtgaagaacaagttaatttacttgagcaaagttttggggacgagcacaaactagagtcagagagaaaggacaagctagccgctgagctagggctcgaccctagacaagttgcggtgtggttccaaaacaggagggctcgttggaagagcaagaagctagaggaggaatattcaaagttgaaatctgaacatgacaataatgttgttgagaagtgtcgtctggaaactgaggtgttgaagttgaaagaacaattgaatgaatcagagaaggagatacaaaggctattattagaacgatgtgatggggtatcgagtaattacacaagtccaagtgcttcatctttctcaatggaagcaccatttctaggggaatttggaatggatggattggacaatgtgttttatgcacaagagaataattatgttcaaggattagattgggtgaacttatatatttgatataaataattataaacatcatcatgtgattaatttttaattttaggatcccctaattctatttgtaaataagtaacccccccatataacgtactaaattatgtaaaaatatctttttttttccctgctttttttctagactagtgtggtaattaaagttactagtatttgactagctagctacccagttgcaaaatggaatataacttggatttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="37840" stop="40517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38140" g_stop="38342" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38343" i_stop="38472" i_length="130">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38473" g_stop="38795" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="526" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38796" i_stop="39767" i_length="972">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39768" g_stop="40219" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="978" r_length="452" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U563285" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>978</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38140" e_stop="38342"/>
          <exon e_start="38473" e_stop="38795"/>
          <exon e_start="39768" e_stop="40219"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACCTTAGTCTTCACTCCATCTATATAATTTTTTTTTCCCTTCAAAATAAATAAATAAAAGTCTTCTCCATTTCACTTTTACACCACAAAAAATAAATAAAAATATAAACACCATGAACCATCAGGTTATAGAAGATGATAATATGGTACTTATTTCCCAGTACTATCCTGATATTTACACCCAACTTGTACCACAACAAGGTTAGTACTATAATTTACCATAACTCTTTGTCTTTTCTAGCTTCAAAATTTACTGGTCTGACTAATTATTCATATTTAGTAGATTTATGTAGACATTGAGATCTCTGACTAAGGGTGTAATAACATGCAGGAGAGTCAAAGCCGCGGAGAAGACGTAAGAAGAACAAATTAGGAGAAGGGAGTGGGAATGATCAAATGATGATGATGAGGAAGAGGAAGTTAAGTGAAGAACAAGTTAATTTACTTGAGCAAAGTTTTGGGGACGAGCACAAACTAGAGTCAGAGAGAAAGGACAAGCTAGCCGCTGAGCTAGGGCTCGACCCTAGACAAGTTGCGGTGTGGTTCCAAAACAGGAGGGCTCGTTGGAAGAGCAAGAAGCTAGAGGAGGAATATTCAAAGTTGAAATCTGAACATGACAATAATGTTGTTGAGAAGTGTCGTCTGGAAACTGAGGTTCGTTTTCTATCTACTTTTTTCGTTTCATATTACTTAACCTCGATTCTCCTGATTTAATAAAATGAACAAGTTAGAAAATACTTTGGTTTAACGAGGCAGTAGTTAGTGGTAGGGTAATTTTGGGGATTTGTCAGTGAAAACTGGCAGCATAAACGACGTTTGAAGTGGTCCTAACTCTTAAAAATATTTTCAAGATGAGTTGTTTAATTAAAAGGGGAAAGCAAGAATAGAATTTGTAATTATGAAATTTTAAAGCCTTAAATTCTAATGTACAGGTTGATAAATAAAAAAATGACCAAATTATATATTTAATCACGCTGTAAAACTTTTGCTTCTACATATATGACCTTATTTGTGAGGATATTTTAATACTACCAGTAAAAATAACCAAACTATATATCCTGCTAATTCACACCTGGTTAAACTATATTGAAAATGTTAAAAATATTTATACTAATTATCGAAGTTAAGAAGATATACATCAGCTTTAAACTAGAAATAATCGTCATATTTAGACATGCAATATGAACCCTAGACAGCTCGATAATGGATCTAAGTGAACAAACAGATTGGGATTACTAAGGTAAAACATAATGTTTCGCACTTGTATTTATTCTTGTTAAGTAATTTTATTTTAATAAAAAATCTGTAGACGCTCTATCTATCTAAAAAGCGTAAAAAGATAAAAATAATCGTAATAATAATAGTGTCACCCTTATAGGCAGCAAAGGGAACTACACCCTCCACTTAACAAACCTCCGTACGCTCTTGTCGTTTTTTTTTTTAGATGTCCAAGTTAATCCCCTCGTACCTTTTTGGTGGGTGGTGGCATCACATGCCTTTCTTTCTCACGTGCTTCTTCCACATTTTTGTATCGAATATCATACTTATCATCGATACATAAATATTTATATAGTCAATTTTAATTTATTTGAAATTAAAATGCGTATATTATTTTTTTTTTTATAGGTGTTGAAGTTGAAAGAACAATTGAATGAATCAGAGAAGGAGATACAAAGGCTATTATTAGAACGATGTGATGGGGTATCGAGTAATTACACAAGTCCAAGTGCTTCATCTTTCTCAATGGAAGCACCATTTCTAGGGGAATTTGGAATGGATGGATTGGACAATGTGTTTTATGCACAAGAGAATAATTATGTTCAAGGATTAGATTGGGTGAACTTATATATTTGATATAAATAATTATAAACATCATCATGTGATTAATTTCTAATTTTAGGATCCCATAATTCTATTTGTAGATAAGTAACCCCACTATATAACGTACTAAATTATGTAAATATATCTTTTTTTTTCCTTGCTTTTTTTCTAGACTAGTGTGGTAATTAGAGTTACTAGTATTTGACTAGCTAGCTAGCAAGTTGCAAGATGGAATATAACTTGGATTTTTATTTTAA</genome_strand>
        <mrna_strand>AGCACCTTAGTCTTCACTCCATCTATATAATTTTTTTTTCCCTTCAAAATAAATAAATAAAAGTCTTCTCCATTTCACTTTTACACCACAAAAAATAAATAAAAATATAAACACCATGAACCATCAGGTTATAGAAGATGATAATATGGTACTTATTTCCCAGTACTATCCTGATATTTACACCCAACTTGTACCACAACAAG..................................................................................................................................GAGAGTCAAAGCCGCGGAGAAGACGTAAGAAGAACAAATTAGGAGAAGGGAGTGGGAATGATCAAATGATGATGATGAGGAAGAGGAAGTTAAGTGAAGAACAAGTTAATTTACTTGAGCAAAGTTTTGGGGACGAGCACAAACTAGAGTCAGAGAGAAAGGACAAGCTAGCCGCTGAGCTAGGGCTCGACCCTAGACAAGTTGCGGTGTGGTTCCAAAACAGGAGGGCTCGTTGGAAGAGCAAGAAGCTAGAGGAGGAATATTCAAAGTTGAAATCTGAACATGACAATAATGTTGTTGAGAAGTGTCGTCTGGAAACTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGAAGTTGAAAGAACAATTGAATGAATCAGAGAAGGAGATACAAAGGCTATTATTAGAACGATGTGATGGGGTATCGAGTAATTACACAAGTCCAAGTGCTTCATCTTTCTCAATGGAAGCACCATTTCTAGGGGAATTTGGAATGGATGGATTGGACAATGTGTTTTATGCACAAGAGAATAATTATGTTCAAGGATTAGATTGGGTGAACTTATATATTTGATATAAATAATTATAAACATCATCATGTGATTAATTTTTAATTTTAGGATCCCCTAATTCTATTTGTAAATAAGTAACCCCCCCATATAACGTACTAAATTATGTAAAAATATCTTTTTTTTTCCCTGCTTTTTTTCTAGACTAGTGTGGTAATTAAAGTTACTAGTATTTGACTAGCTAGCTACCCAGTTGCAAAATGGAATATAACTTGGATTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602368" ref_strand="+" ref_description="SGN-U602368 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ttgattatatattattactcttaaagtacctatttatttaattgattgatttattaactataaaggattttttaagcaaagaatcaaacggtacgtacacgtagcccaattagctgtttttggagatttttgcttattaaaatggtgaataatcctactttaagattgttttaagtcacgacttaggagctgtattggaccctcaataaattactcaaaaacagcaaagagtagagtcgaatttcaaacgattaatgcaggtaaagtcatacaagattatttacccctatgggaattaccaataatacattttaaataatcacctatataattttttagagtactacgcattaatctcttctctttttttttgctcgattaataatgattgaattatctttaaaaaatgtaatacaatgaatatgattatttcaatctcaataagatatctcaaattttcgtacgctagaatatgaaaaaaatgaaactatgaagcattcccctacacaagaataaccttatgtgttatgttaatggcctatagtaaaacattaaattgagtgaagtggtgtggtttagggcactcaaaagtcataaaatataacccacctataantggctagaaagtgtccaaaattannncgtaaattagggattgctgaattttagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="-" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="45244" stop="43975"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44944" g_stop="44275" g_length="670"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="670" r_length="670" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="-" ref_id="SGN-U602368" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U602368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44944" e_stop="44275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTATATATTATTACTCTTAAAGTACCTATTTATTTAATTGATTGATTTATTAACTATAAAGGATTTTTTAAGCAAAGAATCAAACGGTACGTACACGTAGCCCAATTAGCTGTTTTTGGAGATTTTTGCTTATTAAAATGGTGAATAATCCTACTTTAAGATTGTTTTAAGTCACGACTTAGGAGCTGTATTGGACCCTCAATAAATTACTCAAAAACAGCAAAGAGTAGAGTCGAATTTCAAACGATTAATGCAGGTAAAGTCATACAAGATTATTTACCCCTATGGGAATTACCAATAATACATTTTAAATAATCACCTATATAATTTTTTAGAGTACTACGCATTAATCTCTTCTCTTTTTTTTTGCTCGATTAATAATGATTGAATTATCTTTAAAAAATGTAATACAATGAATATGATTATTTCAATCTCAATAAGATATCTCAAATTTTCGTACGCTAGAATATGAAAAAAATGAAACTATGAAGCATTCCCCTACACAAGAATAACCTTATGTGTTATGTTAATGGCCTATAGTAAAACATTAAATTGAGTGAAGTGGTGTGGTTTAGGGCACTCAAAAGTCATAAAATATAACCCACCTATAAATGGCTAGAAAGTGTCCAAAATTAAGGCGTAAATTAGGGATTGCTGAATTTTAGT</genome_strand>
        <mrna_strand>TTGATTATATATTATTACTCTTAAAGTACCTATTTATTTAATTGATTGATTTATTAACTATAAAGGATTTTTTAAGCAAAGAATCAAACGGTACGTACACGTAGCCCAATTAGCTGTTTTTGGAGATTTTTGCTTATTAAAATGGTGAATAATCCTACTTTAAGATTGTTTTAAGTCACGACTTAGGAGCTGTATTGGACCCTCAATAAATTACTCAAAAACAGCAAAGAGTAGAGTCGAATTTCAAACGATTAATGCAGGTAAAGTCATACAAGATTATTTACCCCTATGGGAATTACCAATAATACATTTTAAATAATCACCTATATAATTTTTTAGAGTACTACGCATTAATCTCTTCTCTTTTTTTTTGCTCGATTAATAATGATTGAATTATCTTTAAAAAATGTAATACAATGAATATGATTATTTCAATCTCAATAAGATATCTCAAATTTTCGTACGCTAGAATATGAAAAAAATGAAACTATGAAGCATTCCCCTACACAAGAATAACCTTATGTGTTATGTTAATGGCCTATAGTAAAACATTAAATTGAGTGAAGTGGTGTGGTTTAGGGCACTCAAAAGTCATAAAATATAACCCACCTATAANTGGCTAGAAAGTGTCCAAAATTANNNCGTAAATTAGGGATTGCTGAATTTTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563307" ref_strand="+" ref_description="SGN-U563307 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|15384989|emb|CAC59823.1| (e_value=0) Xaa-Pro aminopeptidase 1 [Lycopersicon esculentum]; (*ATH) AT4G36760.1 (e_value=0) | Symbol: None | aminopeptidase P, similar to Xaa-Pro aminopeptidase 2 (Lycopersicon esculentum) GI:15384991; contains Pfam profile PF00557: metallopeptidase family M24 | chr4:17326649-17330214 FORWARD | Aliases: AP22.64, AP22_64; (*SWP) sp|Q6P1B1|XPP1_MOUSE (e_value=2e-137) Xaa-Pro aminopeptidase 1 OS=Mus musculus GN=Xpnpep1; ">
      <seq>gggccatggccatggactagagatgaaaaccacacgtcaaactccaatctctaatcgaaagagacgatggcggatacactcgctgctcttaggtctttaatgtcctctcactctccttctcttcatgctctgattattccttccgaagattatcatcagagcgaatatgtatcggcacgggacaaaagacgcgcatttgtttctggattcaccggaagtgctggtttggcgcttataaccatggatgaagcacttttatggaccgatggcaggtatttcttacaagcagctcagcagctcagtgaccagtggaagctcatgcgtatgggagaagatcctcccgttgatatctggatggccaataatctaccaaaggatgcggccattggtgtggatacgtggtgtgtatcagtagatactgcacagaaatgggagtgtgcttttgctaagaaacaacaaaagttggtacaaacaactagaaacttggttgatgatgtttggaaaaatcggctacctgcccaagcaaatcctgtaattgtgcatccgttgcaatttgctggtcagtctgttgcagagaagttgaaagaattgaggaaaaagcttgtaatggggaaagcttgtgctattattataacagcgcttgatgaagttgcatggttatataatgtccgtggcagtgacgtatcatattgcccagttgttcatgcatttgcgattgtgactatagattcagccttcttctacgtggataagcaaaaattgtctcctgaggcaaactcttacatggaagaaaatggaattatggtgcgggattatggtgatgttagctcagatgtggtcctccttgcatctgatcaactcacttcttgctcctcaactaaggggtctaaagggaacccaaagattgatgttagaaatgccacttatgtaggaaatagtgatagtcatgctgctgagtttgtaaatgacctcatttgggttgatcctggagcatgttgcttcgctttgtattctaaattgagtgctgataaagttctccttcagcaatcacctttggcccttgcaaaagctctgaagaaccctgttgagatagaaggattaaagaaggcccattttcgggatggggcagctgttgtgcaatatcttgtctggcttgataagcagatgcaggaaatatatggagcatctggttatttcatggaggctgagagtaccaaacagaagaaacaactggggactaaaagactgacagaagtctctgtgagtgataagctggaggagttccgtgcatcaaaggagcattttagaggattaagtttccgaactacctcttctgttggctcaaatgcagccattatccactataaacctgaggcagaaacatgtgctgaactcgatccagattgtatttacctattcgattctggagcacagtatctggatggaacaactgatattacacggactattcatttcggaaaaccttctccacatgagaaatctagttacacggcggttcttaaaggacatatatctttgggaaacgccaggtttcctaacggaaccaatgggcaagctcttgacattcttgctcgaattcctttgtggaaagatggtcttgactataggcatggtactggacacgggatcgggtcttacttaaatgtacatgaaggacctcataatattagtttcaggccatctgcacgggatgtgccgctacaagtttcaatggctgtaacagatgaacctggttattatgaagacgggaactttggtataagaatagagaatgttcttattgtcaaggagggccatacgaagttcaacttcggcaataagggctacttatcatttgagcatataacttgggcaccataccagaggaaactaattgacgtgagccttctgattcctgaagagattgaatggttaaatgaataccatgcaaaatgtagggaaattcttactccttacctgaatacatctgagatggaatggctgaagaaggctaccgaacccattgcagcttgacatgcctcatttgttaggggattggagttgaggttaatcaaaggctactgatccttttccagcttaagcccttcatcatatgtagttaaatcataaagatgcgacaagtctatgctgcgtttcgacggagttaataccgtaactcatttttgcgggctcgcttgctttattcttctccttcccctcactatacagctcccattatctttgaactctttcattaattggtaacaactacaacactctgaaataaaatctccaaacaacggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="47583" stop="56461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47883" g_stop="48041" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48042" i_stop="48118" i_length="77">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.870" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48119" g_stop="48182" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="223" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48183" i_stop="48274" i_length="92">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48275" g_stop="48414" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="363" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48415" i_stop="49552" i_length="1138">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.770" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="49553" g_stop="49837" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="648" r_length="285" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="49838" i_stop="49938" i_length="101">
            <donor d_prob="0.753" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="49939" g_stop="50061" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="771" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="50062" i_stop="50160" i_length="99">
            <donor d_prob="0.849" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="50161" g_stop="50466" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="772" r_stop="1077" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50467" i_stop="51722" i_length="1256">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="51723" g_stop="51809" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1078" r_stop="1164" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="51810" i_stop="52253" i_length="444">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.778" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="52254" g_stop="52321" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1165" r_stop="1232" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="52322" i_stop="52775" i_length="454">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="52776" g_stop="52842" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1233" r_stop="1299" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="52843" i_stop="53461" i_length="619">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.887" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="53462" g_stop="53596" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1300" r_stop="1434" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="53597" i_stop="53693" i_length="97">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="53694" g_stop="53774" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1435" r_stop="1515" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="53775" i_stop="54444" i_length="670">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="54445" g_stop="54499" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1516" r_stop="1570" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="54500" i_stop="54693" i_length="194">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.248" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="54694" g_stop="54798" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1571" r_stop="1675" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="54799" i_stop="54872" i_length="74">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="54873" g_stop="54944" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1676" r_stop="1747" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="54945" i_stop="55365" i_length="421">
            <donor d_prob="0.564" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="55366" g_stop="55490" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1748" r_stop="1872" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="55491" i_stop="55729" i_length="239">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="55730" g_stop="56161" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1873" r_stop="2304" r_length="432" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U563307" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2304</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47883" e_stop="48041"/>
          <exon e_start="48119" e_stop="48182"/>
          <exon e_start="48275" e_stop="48414"/>
          <exon e_start="49553" e_stop="49837"/>
          <exon e_start="49939" e_stop="50061"/>
          <exon e_start="50161" e_stop="50466"/>
          <exon e_start="51723" e_stop="51809"/>
          <exon e_start="52254" e_stop="52321"/>
          <exon e_start="52776" e_stop="52842"/>
          <exon e_start="53462" e_stop="53596"/>
          <exon e_start="53694" e_stop="53774"/>
          <exon e_start="54445" e_stop="54499"/>
          <exon e_start="54694" e_stop="54798"/>
          <exon e_start="54873" e_stop="54944"/>
          <exon e_start="55366" e_stop="55490"/>
          <exon e_start="55730" e_stop="56161"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCCATGGCCATGGACTAGAGATGAAAACCACAAGTCAAACTCCAATCTCTAATCGAAAGAGACGATGGCGGATACACTCGCTGCTCTTAGGTCTTTAATGTCCTCTCACTCTCCTTCTCTTCATGCTCTGATTATTCCTTCCGAAGATTATCATCAGGTTCCTTCACTCTTTCTCCAATTTTTTGTGATTTCATCGAACTTGCCTTTCAATTGCGTTATTGGATGATATGACAGAGCGAATATGTATCGGCACGGGACAAAAGACGCGCATTTGTTTCTGGATTCACCGGAAGTGCTGGTTTGTTTTTGCTTTTTCTCAATCACTTCACTCCGTGTTGATTTAATTGTTTTCGTTTGTGGAATATCAGCTGAAAAATTAATTCGTCCTAGGTTTGGCGCTTATAACCATGGATGAAGCACTTTTATGGACCGATGGCAGGTATTTCTTACAAGCAGCTCAGCAGCTCAGTGACCAGTGGAAGCTCATGCGTATGGGAGAAGATCCTCCCGTTGATATCTGGATGGCCAATGTGACTATTCCTCTCTTTGTTCTAGTATATTCCATTTGTGCTTATTCTATATTTATGTAAATCATAAGCTGTGCGAAACTAACATATTCTATACTTTTTTGCCCTGTCTTGCTTGTTGCTTAGTTTGCATCAGAACTGCTATTGTATAGACTCATCGACTCCTACTTGGTTGGTTGTAGACTTGTAGTGATTAGTAAATCAATATAAGTAAGTATTGGACAGAAGTTCTACAGAGTTCCTACAGTACTTATATTTATTATATGTATATCAGCTGTGATGTATATGGAAAAAAGAAAAATGTTAAATAAATAATTGAACTTCCAAGTATTGTGTGTACAGTTGTGTAATTATCTTTAATGTACTTGAATAGAAAATGTCTTTTGATCTTATTGTTGATATATTAATCTTCTTGAAGGTTCTGTTATCGTCAACATGTGCATTAAAACTTCCATATAGAAGTGATCATTCCATCATTCTCCTTTTGGAAATTGGAATGACATCCCTTCAGTTCATTCATGTTGTATCCTTCACTTTTCTTGCCATAATACAACCTTCCTGTCTTAAAATAATCTGAGATCATCTCACCAATTCAATTTTAAAACTGTGACTCTGTGAGTGCATTGAAGTCGAAATCTCAATCTTTTATTGTGGACTGTTCATTATGTTTCCAGAGCAAGAATTCATACGGAATCGGCAAAGGTCTTTGAGTTCATTTTGTTTATCAGTTGTCATGCATCATATTTTCAGCTTGAATCTCTTATATTTGTTAGATCTTTATTTTCTACAGTGTCACTCTCGCTTCTCTTTAGTTATTTCAGTAGATGTATAGTTTGTCTTATAACTTTGGCAGCAATAACCGAATGATAATATAGGAATTTAGTATGTCAAATTGAATTTAATTGAAGATAATATTATTGCCTGATCTATTGTATTTTGTCTGCACCCCTACTGACATATGATGTATCATTTCAACAATTACTCTTTCATTTCCAAGTTTTTTCTTCTAGTCACTGTATCCTATACAACAAGGTGCTGTAATTATTTTAATCTGGAATTGCAAGCTAGAGGAGTGTGAACTTTGTGACCCTGCCTGAAGTTCAGCTGGTATGCTAATTTATTTTATAATGTGCTTTACTAGAATCTACCAAAGGATGCGGCCATTGGTGTGGATACGTGGTGTGTATCAGTAGATACTGCACAGAAATGGGAGTGTGCTTTTGCTAAGAAACAACAAAAGTTGGTACAAACAACTAGAAACTTGGTTGATGATGTTTGGAAAAATCGGCTACCTGCCCAAGCAAATCCTGTAATTGTGCATCCGTTGCAATTTGCTGGTCAGTCTGTTGCAGAGAAGTTGAAAGAATTGAGGAAAAAGCTTGTAATGGGGAAAGCTTGTGCTATTATTATAACAGCGCTTGATGAAGTAAATGTGTAACCATAGACCCAAATGCTTTCCATCTTATAGCTTTGGCTAATCTCGTCTTGGATATTCTTCATTTCTCCAATATTATTGCCAATGTACAGGTTGCATGGTTATATAATGTCCGTGGCAGTGACGTATCATATTGCCCAGTTGTTCATGCATTTGCGATTGTGACTATAGATTCAGCCTTCTTCTACGTGGATAAGCAAAAATTGTCTCCTGAGGTTGCATCCAAATGGCATAATCTTTTCATTTTAAACTGAAAACAATTGCATTTTGTTATGTTTTTTATACTATTAAATAAGCATGTATATACCATGCAGGCAAACTCTTACATGGAAGAAAATGGAATTATGGTGCGGGATTATGGTGATGTTAGCTCAGATGTGGTCCTCCTTGCATCTGATCAACTCACTTCTTGCTCCTCAACTAAGGGGTCTAAAGGGAACCCAAAGATTGATGTTAGAAATGCCACTTATGTAGGAAATAGTGATAGTCATGCTGCTGAGTTTGTAAATGACCTCATTTGGGTTGATCCTGGAGCATGTTGCTTCGCTTTGTATTCTAAATTGAGTGCTGATAAAGTTCTCCTTCAGCAATCACCTTTGGCCCTTGCAAAAGCTCTGAAGGTGAATAATACTACCACAAAACTTACTTATCCCCTAAAGTTTGTTGTCTGAGCATTTTATGTGGTTGAAAGTCTAGTAGGTCTTTAGACCGCCTTTGTTTGGTTGGATTGGGGTCAAGTCAATCAATTGTTCCATCAGAAGAAAAATAATAGCAAAGAATTACATGAAGACAATTGATGGCCCAAGCTTGATCAGCATTTGTTGTTCCATTAGTATGCATTACCTCTATATGCTTTTCAATATTTTGAACTGAATCTATCTTAGGACCCTTGGATGTTTAGGATTGTTAATCTCATCAGTCCCGTCTGCGACCCTTAAGAATTCAAATTCAGCTTTCTCCGGATTATTTCTAATTTCCTGTTGTATTTTTAGTGAAAATACTAATCATCATGTTTATATTGTCTTGATGTATAATATGGACCTGCTGATTCCTCCCCCTCCTTACCTCCTCTAAGAGTTCCTGAGTGAAATGACAAATCAGTGATCGTATTTTGATAAGAGAAAGTATTCATTTTGTCAGTGTTTGAGATGTAATTCAGCTCTGATTTTGTTGCATTTGTTTGACCAAAGCTTGTATATCAGTTCTATTTTCCTTGTCAGTTATTGTTATATTTGTCTAATTGGTGTTAAACTATTTTCTTTTTGAAAAATGAAAATTCTGGTGTGAGCTTACAGTCATTCTTATCCGACTAATTTGACACCTTTAACTAATATATTTTTGCTAACCACCAACTTCTGCTGTGTCTTTCATCAATACAATTACTTTCTTCCAATTCCATGTTTCCTCCCAGCTATAGTTATTACTAAAGTTATCAGACTGTCTTAACACTATGTTGCTCGGACTCTTCAAAAATGTCTATAGGTGTGTGTTGGATATTTCAAAAGTAGTGCATTGGAGAATCTGACACGGGAGCAGCAACATATTGGAGAGTCTGAGGAACATAGGTCTAATGTACTAGTTTCTTCATGTTTATGTGATTAAACCAAATCAGTCTTTGTCTTCTTCTGTCTTTTCCGCGTCTGCTATGATCTGTTCACTCCCATATTTTTTCTTTCACTTAATTTCTTTCTTGTTGGTATAAAAAAAGTGAGTGTTGTACTAGAACAATTTACTGCGTGGAGATTGTAAGTTTAGTTTATTACACTTGCCATTTCTAAAAAAATTATCTGGCTTTTGAATTATCATCTGTGTTTGTGATCTACTTCTATTCTCAAGCTTACTGTTGATTGCTAAACTACAAAATTATAATTTCTAGAACCCTGTTGAGATAGAAGGATTAAAGAAGGCCCATTTTCGGGATGGGGCAGCTGTTGTGCAATATCTTGTCTGGCTTGATAAGCAGGTACGTCAGATTCTTAGAGTCAATCTTCTAGTAATCTTTGTGAGTTACTGCCACCTACTGCATTTGCATCTTCCTTAGATTCTATAAGTATGTAGACATGTGTGTATGTATGTACTTTGTGTGTGCGCGTGCGTCTATGTATATATGTGTGTATGGTTTCTTTTTAATCTTTATACAAGTGACGAGTGCAAGTTGGTATATACCGATAAAACCAAATATGTCGGGTTAGAAATTCTGTCCTATGCAAAACTAGAAGAGTAGAAGGATAATGTATCTCTCAGAAAAAGATGTTATGTCTACTTGCAATGCCTTTTTGCAAATGGTGTGAACTTTATATCTTTAGCAGGGATCTCTTCACTTTTTAGGTGCAGAAACACTTGATTCAAGCTATTCATGGTTTCAGTAGTTTGGCAAGATGAGTTTCAACTTGTTCAAATTTTCCAGATGCAGGAAATATATGGAGCATCTGGTTATTTCATGGAGGCTGAGAGTACCAAACAGAAGAAACAACTGTAAGTATTTCTGGTTTCTTGTACTTTTTCATGTTTTTGGCGAGTAAGTACATTCTAAGAATTGATCTCTTATAGGATGTTAGTTCAGGACTTTTGTCCCCCCCTCGACAATTCAGGATCCAAGAAAAAAGGAATTAGTCTATTAAAGCTGGCATCTTTTGTTGATAGGAAGATGCATTATCCAAGAAGTGATTTCTTGATTTAGTCTGTGTAGAAGGTTATTCTTGTGGGCTGTGTGGATTTCAAAATTTAAGACTTTGTTTTCTTAAGATAGAGCCAAGACTTTTAGTGGCCCTTGATTTTCTGAAGGAAGCTTCTGCAAGTTACTGATCTTCAGTCAATAATTAAGTGATTATTGAGGAACTTATCATGAAGCATGGGATATATTATATTGTTTTCCTTAGTAGTGGGTCCATGTTTTGTACCTTATTTTTGTAATAATTCACTATGTTAGGGGGACTAAAAGACTGACAGAAGTCTCTGTGAGTGATAAGCTGGAGGAGTTCCGTGCATCAAAGGAGGTAAATGGTTGTATTCTGATGAAAACTCTAGCATGAAATCTGTTGTCTTATACTCTTATCACTCTATTTATGTATGAGTTATCGTCATCTAGGTTGTGAGCTGATGATGACTCTAGAGTTTATTTCCAGTTTGTTGCTTCTGTTTAACTGCTATGTTATTGTTTCCAGAACCACATGATATGCTGATTTCGACTCGAGCTCTTTCCAGTTACACGCTGGCATATTTTCTCTATCTTTATTTTTTAAAATGTACAAGAACAATAATATCATTTTTCTATTGTATCCGCATTGCAAGTGAGTGTAGTGATTTAAAAATAGACAAGTATAAGGGGTGGCAAAAAAAAAAGGAGGTAAAAAGTACGAGTATGTATTATCAAAATGTTAATAACATGTATTGGGATTCAGGAGTACTTAAGATACCTCGGGATAATATGTTTAGTTGCTTCAATTAACTAGAAGTTTTTGCCTTGAGCTCTTCCAACAAGTGCAGCTTGGTTCCTTTTCTGATGGTTGTGATCTTTCTTGAAGTTAGCAAAATCATTAAGAATCTTGTTTTCTCAACAATAGTATCACCATTATCTTAATGTAATGGGGTAATGTTGCTCCTCTACATCTGCAGCATTTTAGAGGATTAAGTTTCCGAACTACCTCTTCTGTTGGCTCAAATGCAGCCATTATCCACTATAAACCTGAGGCAGAAACATGTGCTGAACTCGATCCAGATTGTATTTACCTATTCGATTCTGGAGCACAGGTATGTGAGAACTGAGAGCATATATTCGGGATTGCTACTTTGCGTACTTCTATATTTAACATGTGATCTTTCTATATATATGATGGTGTTGCTGAAGTATCTGGATGGAACAACTGATATTACACGGACTATTCATTTCGGAAAACCTTCTCCACATGAGAAATCTAGTTACACGGCGGTATGTGAAAAGTGTTCTGCATTTTTATGATTCCAAACCATGTCGGCTATGCATGATGGAGTGAAATTTCATAATGAGAGTTCTGATTTCAGATTACTATTGCTGATCTTATCTATGTCCGGTCTCCTTCCACACTTGGTCACGCTTCCTTTAGATCATTCTAGAAGCGTTAATCCATTTAAGCCTTGATTAGAGAATCTATTGGAGGCATTATTCTCCTAGAGATCTCTAGTTCTTTTATTCCAGTGCTTCTATCATGTAATCCTTCTTATTCAAGTCTTAACATACATGCATTACACATGCTTTCCTGTGGGAAATTCTCTCTTTGCTATGAATGTTGATTGAAATCCATAAAAATTGTAGAGCAAAAGAAATTGTCTTATGAGTAAACAAAGCAACAGTAAGTCGAAACTTTTCTGTAAATTGCCTTCGTTATTCTTTAGGTTTTCTTTTCTGGTTTATCTTTTTAGGGGTGACTGAGAAAGGATAATGATTGGCTATACTTCGAACAGTTTTTTTTTTTGTATATATATGTATATAGGTTTGTCTTCTATGCTGGTTTTGCTCTGTGTGATTGATTCTTTAGAATCTTATACTGGAAATTTTTGTTCTTTCCGTATCACAATTCAATACTGCATTAATGGCTTAAAGGTTACTTTATTTTATGTAGGTTCTTAAAGGACATATATCTTTGGGAAACGCCAGGTTTCCTAACGGAACCAATGGTATGATTATGTGGAACTTGATACTCGATGTCTGTAATTTTCTGAATTTTCTTCAGTGGTTAGATGTACCAATGCCTATATCCACAGGCTATTATTCAGAGGCATATGCTTACCATTTTCATTTCATTTCATTCAAATGCTGTGGCCCAAGATAGTTGGCTTATCAGAACATTGTGCTTAACTACTCTTGATAGGGCAAGCTCTTGACATTCTTGCTCGAATTCCTTTGTGGAAAGATGGTCTTGACTATAGGCATGGTACTGGACACGGGATCGGGTCTTACTTAAATGTACATGAAGGTAAACTTGCCATCATGATTATTGAGGTACTTTTAAGGAGCAATTTATATTTACATTTAATTTATTTTTGGCAGGACCTCATAATATTAGTTTCAGGCCATCTGCACGGGATGTGCCGCTACAAGTTTCAATGGCTGTAACAGATGGTCGGTAGCATCTTATTACATTACGAGTTATAAAGTAAACTTTTCCTTAGCATGATTGATGCCTCTGCGTTATTGACTGTATTTTCACTCCTAACATGGATTAGTGGGTTTGTCATGCTTCTTTACGAAGGATGTGCATTAGTAAATATCCTATCCTAACATAGTCGGTCCTGAATTTGCTTACTGGAGATCTACAACTTACAGAACTGATATGATCAGGGGAAATGTAATGTTTTTCTAGTTATACTAGTAAGAGAATGGCCTGTCAATAAAATTAGGATAAACCACGTCATACCATCATGTTGTCCAGCTTGCTCAATAATCTAACAGTTTTACCTTTCTAGTTGCTTCTGCACATCTTTATAGTTTTCTTGTTTCAGCTTTTCAGAGTTTGAACATTCATATGGTATATATTTTTCAGAACCTGGTTATTATGAAGACGGGAACTTTGGTATAAGAATAGAGAATGTTCTTATTGTCAAGGAGGGCCATACGAAGTTCAACTTCGGCAATAAGGGCTACTTATCATTTGAGCATATAACTTGGGTAAGTTTGTAAACACCATGTTTTATGTCTATTTACATACGTGATATGCATCTACCTAGATGTTCTAGATGTACAAGTGTGTGGTGCGATTGCACTTTTGCAGTCCAAGAGGAAGCAAGACATTCTCTGTCCTTTTCTGTTTGTATTTTTTTTAAAACTTGGATTATCACTTACTTCCTAATTCTATAGGTTGGAAGTGTTATGTGTCATGAAGGTAAGAATCTTGTTTGTTAATGTAGGCACCATACCAGAGGAAACTAATTGACGTGAGCCTTCTGATTCCTGAAGAGATTGAATGGTTAAATGAATACCATGCAAAATGTAGGGAAATTCTTACTCCTTACCTGAATACATCTGAGATGGAATGGCTGAAGAAGGCTACCGAACCCATTGCAGCTTGACATGCCTCATTTGTTAGGGGATTGGAGTTGAGGTTAATCAAAGGCTACTGATCCTTTTCCAGCTTAAGCCCTTCATCATATGTAGTTAAATCATAAAGATGCGACAAGTCTATGCTGCGTTTCGACGGAGTTAATACCGTAACTCATTTTTGCGGGCTCGCTTGCTTTATTCTTCTCCTTCCCCTCACTATACAGCTCCCATTATCTTTGAACTCTTTCATTAATTGGTAACAACTACAACACTCTGAAATAAAATCTCCAAACAACGGC</genome_strand>
        <mrna_strand>GGGCCATGGCCATGGACTAGAGATGAAAACCACACGTCAAACTCCAATCTCTAATCGAAAGAGACGATGGCGGATACACTCGCTGCTCTTAGGTCTTTAATGTCCTCTCACTCTCCTTCTCTTCATGCTCTGATTATTCCTTCCGAAGATTATCATCAG.............................................................................AGCGAATATGTATCGGCACGGGACAAAAGACGCGCATTTGTTTCTGGATTCACCGGAAGTGCTG............................................................................................GTTTGGCGCTTATAACCATGGATGAAGCACTTTTATGGACCGATGGCAGGTATTTCTTACAAGCAGCTCAGCAGCTCAGTGACCAGTGGAAGCTCATGCGTATGGGAGAAGATCCTCCCGTTGATATCTGGATGGCCAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTACCAAAGGATGCGGCCATTGGTGTGGATACGTGGTGTGTATCAGTAGATACTGCACAGAAATGGGAGTGTGCTTTTGCTAAGAAACAACAAAAGTTGGTACAAACAACTAGAAACTTGGTTGATGATGTTTGGAAAAATCGGCTACCTGCCCAAGCAAATCCTGTAATTGTGCATCCGTTGCAATTTGCTGGTCAGTCTGTTGCAGAGAAGTTGAAAGAATTGAGGAAAAAGCTTGTAATGGGGAAAGCTTGTGCTATTATTATAACAGCGCTTGATGAA.....................................................................................................GTTGCATGGTTATATAATGTCCGTGGCAGTGACGTATCATATTGCCCAGTTGTTCATGCATTTGCGATTGTGACTATAGATTCAGCCTTCTTCTACGTGGATAAGCAAAAATTGTCTCCTGAG...................................................................................................GCAAACTCTTACATGGAAGAAAATGGAATTATGGTGCGGGATTATGGTGATGTTAGCTCAGATGTGGTCCTCCTTGCATCTGATCAACTCACTTCTTGCTCCTCAACTAAGGGGTCTAAAGGGAACCCAAAGATTGATGTTAGAAATGCCACTTATGTAGGAAATAGTGATAGTCATGCTGCTGAGTTTGTAAATGACCTCATTTGGGTTGATCCTGGAGCATGTTGCTTCGCTTTGTATTCTAAATTGAGTGCTGATAAAGTTCTCCTTCAGCAATCACCTTTGGCCCTTGCAAAAGCTCTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCCTGTTGAGATAGAAGGATTAAAGAAGGCCCATTTTCGGGATGGGGCAGCTGTTGTGCAATATCTTGTCTGGCTTGATAAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGGAAATATATGGAGCATCTGGTTATTTCATGGAGGCTGAGAGTACCAAACAGAAGAAACAACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGACTAAAAGACTGACAGAAGTCTCTGTGAGTGATAAGCTGGAGGAGTTCCGTGCATCAAAGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTAGAGGATTAAGTTTCCGAACTACCTCTTCTGTTGGCTCAAATGCAGCCATTATCCACTATAAACCTGAGGCAGAAACATGTGCTGAACTCGATCCAGATTGTATTTACCTATTCGATTCTGGAGCACAG.................................................................................................TATCTGGATGGAACAACTGATATTACACGGACTATTCATTTCGGAAAACCTTCTCCACATGAGAAATCTAGTTACACGGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTAAAGGACATATATCTTTGGGAAACGCCAGGTTTCCTAACGGAACCAATG..................................................................................................................................................................................................GGCAAGCTCTTGACATTCTTGCTCGAATTCCTTTGTGGAAAGATGGTCTTGACTATAGGCATGGTACTGGACACGGGATCGGGTCTTACTTAAATGTACATGAAG..........................................................................GACCTCATAATATTAGTTTCAGGCCATCTGCACGGGATGTGCCGCTACAAGTTTCAATGGCTGTAACAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGGTTATTATGAAGACGGGAACTTTGGTATAAGAATAGAGAATGTTCTTATTGTCAAGGAGGGCCATACGAAGTTCAACTTCGGCAATAAGGGCTACTTATCATTTGAGCATATAACTTGG...............................................................................................................................................................................................................................................GCACCATACCAGAGGAAACTAATTGACGTGAGCCTTCTGATTCCTGAAGAGATTGAATGGTTAAATGAATACCATGCAAAATGTAGGGAAATTCTTACTCCTTACCTGAATACATCTGAGATGGAATGGCTGAAGAAGGCTACCGAACCCATTGCAGCTTGACATGCCTCATTTGTTAGGGGATTGGAGTTGAGGTTAATCAAAGGCTACTGATCCTTTTCCAGCTTAAGCCCTTCATCATATGTAGTTAAATCATAAAGATGCGACAAGTCTATGCTGCGTTTCGACGGAGTTAATACCGTAACTCATTTTTGCGGGCTCGCTTGCTTTATTCTTCTCCTTCCCCTCACTATACAGCTCCCATTATCTTTGAACTCTTTCATTAATTGGTAACAACTACAACACTCTGAAATAAAATCTCCAAACAACGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601814" ref_strand="+" ref_description="SGN-U601814 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|156070795|gb|ABU45207.1| (e_value=2e-93) unknown; (*ATH) AT4G36680.1 (e_value=5e-61)  Symbol: None | pentatricopeptide (PPR) repeat-containing protein, low similarity to fertility restorer (Petunia x hybrida) GI:22128587; contains Pfam profile PF01535: PPR repeat; identical to cDNA membrane-associated salt-inducible protein like GI:2... ; (*SWP) sp|Q9LG23|PPR82_ARATH (e_value=4e-25) Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890; ">
      <seq>tcaaaatttatcatcagatggatgatttaggcacccccagatcagctatttccttcaatgtgcttttatcagcttgcgtgcgctcaaaactatatgatcgtgtcccccagctgtttgatgaaattccagtgaagtatagatttttacctgataaagtgtcgtacggtatactgattaggtcatattgtgaaacggggttgccggaaatggcaatggaaatactcaaggtgatggaggagaaaagtgtggagattacaacggttactttcactactatactacattcattctacaagaaagggaagagtgatgaggcggagaaggtatggaatgagatggtgaacagagggtgtggtccagatgttggtgcatacaatgtgaagattatgaacattcaggggggtgatctggagggcgtgaaagctttaattgaggaaatgaacgatgctggattgaaacctgatacgattagctacaattatttgatgacttgttattgtaagaatgaattgatggacgaggcacagatggtttatgatgatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="59096" stop="60241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59396" g_stop="59941" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U601814" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59396" e_stop="59941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAATTTATCATCAGATGGATGATTTAGGCACCCCCAGATCAGCTATTTCCTTCAATGTGCTTTTATCAGCTTGCGTGCGCTCAAAACTATATGATCGTGTCCCCCAGCTGTTTGATGAAATTCCAGTGAAGTATGGATTTTTACCTGATAAAGTGTCGTACGGTATACTGATTAGGTCATATTGTGAAACGGGGTCGCCGGAAATGGCAATGGAAATACTCAAGGTGATGGAGGAGAAAAGTGTGGAGATTACAACGGTTACTTTCACTACTATACTTCATTCATTCTACAAGAAAGGGAAGAGTGATGAGGCGGAGAAGGTATGGAACGAGATGGTGAACAGAGGGTGTGGTCCAGATGTTGGTGCATACAATGTGAAGATTATGAACATTCAGGGGGGTGATCTGGAGGGCGTGAAAGCTTTAATTGAGGAAATGAACGATGCTGGATTGAAACCTGATACGATTAGCTACAATTACTTGATGACTTGTTATTGTAAGAATGAATTGATGGATGAGGCACAGATGGTTTATGATGATCTGG</genome_strand>
        <mrna_strand>TCAAAATTTATCATCAGATGGATGATTTAGGCACCCCCAGATCAGCTATTTCCTTCAATGTGCTTTTATCAGCTTGCGTGCGCTCAAAACTATATGATCGTGTCCCCCAGCTGTTTGATGAAATTCCAGTGAAGTATAGATTTTTACCTGATAAAGTGTCGTACGGTATACTGATTAGGTCATATTGTGAAACGGGGTTGCCGGAAATGGCAATGGAAATACTCAAGGTGATGGAGGAGAAAAGTGTGGAGATTACAACGGTTACTTTCACTACTATACTACATTCATTCTACAAGAAAGGGAAGAGTGATGAGGCGGAGAAGGTATGGAATGAGATGGTGAACAGAGGGTGTGGTCCAGATGTTGGTGCATACAATGTGAAGATTATGAACATTCAGGGGGGTGATCTGGAGGGCGTGAAAGCTTTAATTGAGGAAATGAACGATGCTGGATTGAAACCTGATACGATTAGCTACAATTATTTGATGACTTGTTATTGTAAGAATGAATTGATGGACGAGGCACAGATGGTTTATGATGATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570508" ref_strand="+" ref_description="SGN-U570508 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147832633|emb|CAN77173.1| (e_value=9e-12) hypothetical; (*SWP) sp|Q40287|UFOG5_MANES (e_value=4e-12) Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5; ">
      <seq>atagaggtaaattctattcgaaacatgcatactgtaaattatagtagcacataataacaacataacatagacaactttagggtatatatagccctaatcactcattatcttaccctttttagatagtttcctcacaccttaatgttcttgcaaccatggatagatctcttctcaatgtctctgaggacttgacacattgaatcatgagaggagcctcctatacttagggctttctctgcactcatcttcagtttcttcacattttccttcaattcatttccttctttatattgcattaccattctcaccaattgctctatttcttccctttccaccacttcctttgttggcaatacctttggcccaacagccactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="65322" stop="66298"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65622" g_stop="65999" g_length="378"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U570508" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65622" e_stop="65999"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGTGGTAAATTCTATTCGAAACATGCATACTGTAAATTATAGTAGCACATAATAACAACATAACATAGACAACTTTAGGGTATATATAGCCCTAATCACTCATTATCTTACCCTTTTTAGATAGTTTCCTCACACCTTAATGTTCTTGCAACCATGGATAGATCTCTTCTCAATGTCTCTGAGGACTTGACACATTGAATCATGAGAGGAGCCTCCTATACTTAGTGCTTTCTCTGCACTCATCTTCAGTTTCTTCACATTTTCCTTCAATTCATTTCCTTCTTTATATTGCATTACCATTCTCACCAATTGCTCTATTTCTTCCCTTTCCACCACTTCCTTTGTTGGCAATACCTTTGGCCCAACAGCCACTCTA</genome_strand>
        <mrna_strand>ATAGAGGTAAATTCTATTCGAAACATGCATACTGTAAATTATAGTAGCACATAATAACAACATAACATAGACAACTTTAGGGTATATATAGCCCTAATCACTCATTATCTTACCCTTTTTAGATAGTTTCCTCACACCTTAATGTTCTTGCAACCATGGATAGATCTCTTCTCAATGTCTCTGAGGACTTGACACATTGAATCATGAGAGGAGCCTCCTATACTTAGGGCTTTCTCTGCACTCATCTTCAGTTTCTTCACATTTTCCTTCAATTCATTTCCTTCTTTATATTGCATTACCATTCTCACCAATTGCTCTATTTCTTCCCTTTCCACCACTTCCTTTGTTGGCAATACCTTTGGCCCAACAGCCACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574130" ref_strand="+" ref_description="SGN-U574130 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157348190|emb|CAO22900.1| (e_value=4e-69) unnamed; (*ATH) AT4G36790.1 (e_value=3e-68)  Symbol: None | transporter-related, low similarity to spinster membrane proteins from (Drosophila melanogaster) GI:12003976, GI:12003972, GI:12003974, GI:12003970; contains Pfam profile PF00083: major facilitator superfamily protein | chr4:17336177-... ; ">
      <seq>cctttcaaaacatccctccatctttcttattatccagattttgtactcataataacataaattgtactgaatcttatcacatattctttacgtttgatgattgtacgtatattgtatggtaagtagatctcaaatcttcatctggggttgtctaaaaatggaatcttgcagcaaataaacagagccacgttgaatgaatggcgagttagtgccccagaaggagaagggccagcaaaaggttgacctttattcctttgggattgatggggttaagcgctagagcttcaagattaccttcttctgtttttcgacctaaatctctgcttcccagccacctttccaccatgagaacaaggacaatttttgggatctctatttccctaatcatcatcaacatggccgctataatggagcgcgctgatgagaatctccttccagctgtttataaagaagtcagtgaagcttttacagcaggaccatctgatcttgggtttctcacattcattaggaactttgtgcagggaattgcttctccagtggcaggtattttagttttaaattatgaccgacccacggttcttgcaattggtatcctcttctgggccctatcaaccggtgcagtgggtgcgagcaagtattttctgcaggttggcttctggagagctgtaaatggcttcggtctggcaattgtgatacctgctttgcagtccttcatagctgatagctacaaggatgaagtcagagggacgggatttgggtttcttaatctaattggtactgtgggtgggataggaggtggagctatagctacagttatggctggtcatgaatactggggcataccaggatggcgcttttccttcatcgtgatggcaactttgagttgtttcataggatttcttgtcttctcttttgtcgttgacccaaggaagaaaagcagtggccaacatgatatttcaaaacagtctgacagggatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="72184" stop="74968"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72479" g_stop="72827" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="349" r_length="349" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72828" i_stop="74040" i_length="1213">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.716" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74041" g_stop="74664" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="973" r_length="624" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74665" i_stop="74762" i_length="98">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74763" g_stop="74768" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="974" r_stop="979" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U574130" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>979</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72479" e_stop="72827"/>
          <exon e_start="74041" e_stop="74664"/>
          <exon e_start="74763" e_stop="74768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCACCAAAACATCCCTCCATCTTTCTTATTATCCAGATTTTGTACTCATAATAACATAAATTGTACTGAATCTTATCACATATTCTTTACGTTTGATGATTGTACGTATATTGTATGGTAAGTAGATCTCAAATCTTCATCTGGGGTTGTCTAAAAATGGAATCTTGCAGCAAATAAACAGAGCCACGTTGAATGAATGGCGAGTTAGTGCCCCAGAAGGAGAAGGGCCAGCAAAAGGTTGACCTTTATTCCTTTGGGATTGATGGGGTTAAGCGCTAGAGCTTCAAGATTACCTTCTTCTGTTTTTCGACCTAAATCTCTGCTTCCCAGCCACCTTTCCACCATGAGGTCAGGTTTCACTTTTATTGCAGCTTCAATTATTAGTATTTTCTTTATGGGTTTTAGGATTCCCTGTTTCAATTTATATATCAACCTTACAGCTTTTGGTGTTGACTTTACAGGGCTAGAATATTTTCAAGTTTAAAAGACTTACATTGATCTCTTACTTCAGTTTACCTGCAAAAAGTTGAGTTGAAGTTGATGCAAATGAATGACCTAAGTGCAAAAAGAGATTTAATTTATGAAATTTTGACGAACTTGTCAAATTACAAGACCTTTTGAGTTTTAAAAAATTTACCTTGAGCAAGGGAACCTATTTCAGCGTTTAGTTTGTCACCGTGTGTCTTTCCTGTTTCTTCAATGTTATAAGCTTTCACACCTCTCCTCCTCAGAGTAGAACATGTCGTACTGCGCAGCAAGATTTGATGTTTTGTCAATTAGTAGTCAATGAAACTGCTCATTTGATGGAATTTATGGGACTGATCGACATTCACTTCGAGTGCTGTTATAGAAAGCATCATTAGTCTCATTTTGAACCTCACTGAGATGGAGAAAAATGGATCCTCTTGATACTAGCTGAAACTTTGAATCTGGACCTCTTATTAATCACTCATTTGTATGTCAGTTTGACACGCTACTTAATTATCATACATTTTCCTGTTTGTTGCTTTGAAAAATATTTTTAGCTTGAATGTTCTCTTACTTCGTGTCTAAGTTGTCGTTCTTGTTTGAACACCCTCCTGAAAACTCCAACTTTTTAGAGAACATGTTGATAGCCACCATATCCGATCAATTAAGCAGTGTTGTCCTGTGTCATGTTGATAGCAGCTTGCAACTCACAATTTGAAGGCTGCGGTTTCTATCGCTTGTTTTATTTGACTTCAGATAGGGCTTGTACAATGTTACATCAATCAGCTGCAAGAAGCACTTTGTTCAAGTCTTTTCTTTGAGAAATTAATATTTTTTTGTAACTTTATTCAAGTCTTATCCTTCTGCTGATCAAATTTTTGATCGTACAACAAGCTGATATTTCCTGCCACAGAAAATGCAATCCCCTTTGTTTCAGTTCCTAATATATGCTGATTACAATCCAACTTGAAAAACTGTTTAGCCCTAACAATGTACAATTCCGTATATTTCAATTAATTTGATTTTTGGAAGAAGATAGTACGTGTTACTGTAGCATTTCTACTTCTGATTTTAATATATTGCCCCAATACAGAACAAGGACAATTTTTGGGATCTCTATTTCCCTAATCATCATCAACATGGCCGCTATAATGGAGCGCGCTGATGAGAATCTCCTTCCAGCTGTTTATAAAGAAGTCAGTGAAGCTTTTACAGCAGGACCATCTGATCTTGGGTTTCTCACATTCATTAGGAACTTTGTGCAGGGAATTGCTTCTCCAGTGGCAGGTATTTTAGTTTTAAATTATGACCGACCCACGGTTCTTGCAATTGGTATCCTCTTCTGGGCCCTATCAACCGGTGCAGTGGGTGCGAGCAAGTATTTTCTGCAGGTTGGCTTCTGGAGAGCTGTAAATGGCTTCGGTCTGGCAATTGTGATACCTGCTTTGCAGTCCTTCATAGCTGATAGCTACAAGGATGAAGTCAGAGGGACGGGATTTGGGTTTCTTAATCTAATTGGTACTGTGGGTGGGATAGGAGGTGGAGCTATAGCTACAGTTATGGCTGGTCATGAATACTGGGGCATACCAGGATGGCGCTTTTCCTTCATCGTGATGGCAACTTTGAGTTGTTTCATAGGATTTCTTGTCTTCTCTTTTGTCGTTGACCCAAGGAAGAAAAGCAGTGGCCAGCATGATATTTCAAAACAGTCTGACAGGTATATACACCTTTATGTTCATCAGTTGTTCCATTTCCTATGCTGTTGAGAGTTTTCTACTGTTTGGTGTTGTTATTTTTTATGCTTTCTCATGCTAGGGATGA</genome_strand>
        <mrna_strand>CCTTTCAAAACATCCCTCCATCTTTCTTATTATCCAGATTTTGTACTCATAATAACATAAATTGTACTGAATCTTATCACATATTCTTTACGTTTGATGATTGTACGTATATTGTATGGTAAGTAGATCTCAAATCTTCATCTGGGGTTGTCTAAAAATGGAATCTTGCAGCAAATAAACAGAGCCACGTTGAATGAATGGCGAGTTAGTGCCCCAGAAGGAGAAGGGCCAGCAAAAGGTTGACCTTTATTCCTTTGGGATTGATGGGGTTAAGCGCTAGAGCTTCAAGATTACCTTCTTCTGTTTTTCGACCTAAATCTCTGCTTCCCAGCCACCTTTCCACCATGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGGACAATTTTTGGGATCTCTATTTCCCTAATCATCATCAACATGGCCGCTATAATGGAGCGCGCTGATGAGAATCTCCTTCCAGCTGTTTATAAAGAAGTCAGTGAAGCTTTTACAGCAGGACCATCTGATCTTGGGTTTCTCACATTCATTAGGAACTTTGTGCAGGGAATTGCTTCTCCAGTGGCAGGTATTTTAGTTTTAAATTATGACCGACCCACGGTTCTTGCAATTGGTATCCTCTTCTGGGCCCTATCAACCGGTGCAGTGGGTGCGAGCAAGTATTTTCTGCAGGTTGGCTTCTGGAGAGCTGTAAATGGCTTCGGTCTGGCAATTGTGATACCTGCTTTGCAGTCCTTCATAGCTGATAGCTACAAGGATGAAGTCAGAGGGACGGGATTTGGGTTTCTTAATCTAATTGGTACTGTGGGTGGGATAGGAGGTGGAGCTATAGCTACAGTTATGGCTGGTCATGAATACTGGGGCATACCAGGATGGCGCTTTTCCTTCATCGTGATGGCAACTTTGAGTTGTTTCATAGGATTTCTTGTCTTCTCTTTTGTCGTTGACCCAAGGAAGAAAAGCAGTGGCCAACATGATATTTCAAAACAGTCTGACAG..................................................................................................GGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579315" ref_strand="+" ref_description="SGN-U579315 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157335382|emb|CAO61212.1| (e_value=1e-13) unnamed; ">
      <seq>gaattacagaagaccggggaacttcatacgctactctgctgaagttgtacgctaccggcccttaacactccggtgacgatgtacgatcaaaactattcaataccagcgcttaactttccagtgacggcgataatacctactgccaagattcgctactcttatcttgaagctatctggtcggagcttccacggcaatcatcacatcaatgtgatcaatttttcaccccaggtgatgtaaggccaagtgtgaaaatgaatcttgttaacagctaaaagagcaaattacaaggtcaagggaagtgcacaagtacatgtgatggggagtcaaaagaaggtaaaccattcctgcccctgttcctgacctgaataagagctgagtcttttcagttatcctacttttcaagataatcttagaatgcattcgtattaatcatgatagtattagagattacaatgcctctttttgtcttggtaaaatggaggagctgaatgacttcttctgctttttcttcttccttaaaaaaatcaatctgttttaccttgattacaagcatcaatacatttacgcgagtccccatccaccctagaggaaagcatagctcttggttgcaaataattcttaagattctcttcaccatgagaatgcatgtgtcagaatgtccttggttaatgaagatttttctgaatctcctgacgaatcttgacctctgcaatgtcttgctctgagtttttcacctggagaagttctcaaaataacctttgatataagacccggttaacatcatcagctacttcaaatttaactctatattcatcttcaaggctattttgtttttttctgtagtactttttaaaacttaatacgtacatcactattaatagatgatccatcatgaggatggtggaggttttgtcttccgtggaatttcaataaaacttgttttctgtggagcctgattaaacagttggttagcacggcacctcgggtggtgggtctatgagattttggaatgaaatttccatatcatggtgtttcttctcagctcataaggttaactgatgcatgcagccacaacggatttcaatgcttttggtgaaattagacatgaccttccacttatttttattgctctttgttttaactcaaaatggcagtcaaacatgttgtctgttgagttgtaaacctgttgcttgtttggcacttcaagtgggtctgtgagattttggagaaagttccatttcatggtgttccttctctgtctcataaggctaactgatgcttgaagccatgacaggttcctatgcttttgagttgattcatgttttgaaaactttagtttctttcccacccctcatcgaactcccttttttcgtgatattacaaaggtaatccctgtttttttattcttattactcactctctctgttttatacacaatgaagatttggaggttttcatttattgatgttcaatcaaacatgttgcctctttcctgtcaagctaaagaactgttgcttggcacggcacttcatttgggtttatgagattttgggagaagtttcattttttggtctttcttttctgttccctaggcataccttgcagccatgctgggtttccaagcttttgagctgatcgtttttggcattgcaaagttcaattttttttttgtcactaaatcactgttttggtgaaactatacgacttcctacttttcttgttcttattactctctccggtataactcaaaaatcaatttaacatgttctgtcttgagctgaattttttgcttggcgtggcacctcaggtgggaatatgagatttaagagaaagtttcatttcatgatgcatcttctctgtctcataaggctaactgatgcttgcagcgatgacagatttctaaccttgtgagctgattcgtgtcttggcttaaagttcggtttcctttcccccttcagcaaaccatccttttcgtgaaattacacatgaccttcctcttttcttgttcttattactctctctgctcctttttaaaaaaccatgacgatttgtaggttctcttccttggaagttcaataaaaatttgtatgatttcacaagggttgttgagaacttggtttcaaacagctttgatgcaggtacctccacggtgtactaatttactctttcaaagtttcaatatttctttataattttactatgtatgtagaattattttgattagttattgtagctgaagttgagttggaacatacatattggtgcctcgatacttatagcccagcttatggagacaataaatgtgtctgcttcttttgtcttctgttatgcttccttttcatcgccattttaactgtggtttcatatgctttctttacacctgtgacatcaaaaaattttgtatgactaattgtgaatttttagcgatgcaaaattggtactgccattcagatgatatgcatgccttcccagcaagctttggccttacacaagaggctctgagccctatttctgatgtttctttgtaggaattgttaccatgggaggccaaatggatattgtaaggtttaggaggacaacaagtgttttgtacgttgaattgatgattggtacaaaagtaattgttcatgatatattttacgactaaccagttcgaaggaagcaaatgcactccgaacacttctagtttcctcaaaatcaaacaagtagaaagtaatgatttacatatttctacttctaaagttgtactttgatatgattgatcttttggtttgcttatataattttgaagtccaagtatagggtctcgcattctccgaaagatctctactaagaatttctcttgcgcatcgttttgtgtcctgcaaaattgttgatattgaaagtgaggatgacctgctttgcacacgtgcttctccttgtccttgctgctgttgtccagtgggtttgggattcatctgggttcccttaaaaattgaatccaagcgctggttcattcaagttttcaggatgcctctcaggtcctgatgtttacacaatgagggtatacatgcccaaattgatggataaagagatgtgataagtcatcttttctacacgttgtttccctaacaaccacggattaatttgcaggtccttcagtatttcattatccacttattttagtatgttgtcaaggaaacagaaacctaatctttggttaatattcactatactggatgcttgttttttgtacgatgtctttgttttccttgacctccgtaatgcaaatatcaattcaagatttgtttccaaaggaccaataaataaattacttaacaacatagctatgagttttggcagtgcatctgacattgagaagcaaaatagatctcagatatatccactgtttttggagccttcaaagacatttgtggaatttaaggatatgttaaggatgttcaaacggttttcaacaaccttgaaggccccactctcacagcttaaaaaaaagtttaattattaagaaagttctgctcaatttattattttacttcatcttctgaggctgtactttttttctcacggaatggactggtgttgatgggagaaagatatggggttatcttgtattatttcacaagggttgttgaggagttggttttcagcagcccagatgctggtgccaccaaggttccatcaatatatccacgtgaaccaccaaaagtcaagtgcaagaccaaggcacaactgtttttccttctcttccacttgcatatattctgacatgagccagagaagatgactctcattagctttctgtgtgagatgcaggtatatcatcctaatatcgatttggagagtaatatatacctcaacatactaagagaaggttgaaacccgttctcagtatcaacacaattagccatggattgtatcttcgtttcacggaaccaaaccatgaggatccccttaatctcgaggctgctgctgttgagagataatcctgagtttaaataaaatgtgaaaagggctatgcattgtggaactgtagtgaatataagcttcacgcaatgcatgtaacctgtcctctggtgctggtaatagtgtttctgattagatgctgtatcattttgaggtgtgctgggttgtatatggtgtccgcaaacttgcagtgccatcttatctgagtgtgtcattttagctttaagttctttgacgtgtatccattgatgtatctgttatgctggctgaacagcatgtcatgaacataaagtaaacaaatggaatggttatatatagacgaaagagcattgccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="-" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="83518" stop="75837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83219" g_stop="83054" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83053" i_stop="82842" i_length="212">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.506" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82841" g_stop="82769" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="239" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82768" i_stop="82670" i_length="99">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82669" g_stop="80334" g_length="2336"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="2575" r_length="2336" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80333" i_stop="80245" i_length="89">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.843" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80244" g_stop="80201" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="2576" r_stop="2619" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80200" i_stop="80124" i_length="77">
            <donor d_prob="0.649" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80123" g_stop="79857" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="2620" r_stop="2886" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="79856" i_stop="79782" i_length="75">
            <donor d_prob="0.826" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79781" g_stop="79243" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="2887" r_stop="3425" r_length="539" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="79242" i_stop="78461" i_length="782">
            <donor d_prob="0.286" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="78460" g_stop="78379" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="3426" r_stop="3507" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="78378" i_stop="78027" i_length="352">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.282" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="78026" g_stop="77935" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="3508" r_stop="3599" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="77934" i_stop="77357" i_length="578">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="77356" g_stop="77283" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="3600" r_stop="3673" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="77282" i_stop="76855" i_length="428">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="76854" g_stop="76598" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="3674" r_stop="3930" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="76597" i_stop="76507" i_length="91">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="76506" g_stop="76137" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="3931" r_stop="4300" r_length="370" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="-" ref_id="SGN-U579315" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>4300</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U579315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83219" e_stop="83054"/>
          <exon e_start="82841" e_stop="82769"/>
          <exon e_start="82669" e_stop="80334"/>
          <exon e_start="80244" e_stop="80201"/>
          <exon e_start="80123" e_stop="79857"/>
          <exon e_start="79781" e_stop="79243"/>
          <exon e_start="78460" e_stop="78379"/>
          <exon e_start="78026" e_stop="77935"/>
          <exon e_start="77356" e_stop="77283"/>
          <exon e_start="76854" e_stop="76598"/>
          <exon e_start="76506" e_stop="76137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTACAGAAGACCGGGGAACTTCATACGCTACTCTGCTGAAGTTGTACGCTACCGGCCCTTAACACTCCGGTGACGATGTACGATCAAAACTATTCAATACCAGCGCTTAACTTTCCAGTGACGGCGATAATACCTACTGCCAAGATTCGCTACTCTTATCTTGGTAAATTCCTGAACTTGGAATTCTTGATTTAAGAAAAAAATCAAGAAATTGGTTTCTTTTTGAAGTTACTACATTGTTCATATGTTGAGGAATTAAAGAAATCGAATTTTTCAAGAATATGTTAGCATTGTAAATATCAAGAAAAATCAAAGAAAAGTTTTTTTAGCTTTTAGGGATGTGGGTAGCATTAAGAAAATTGCATCATTCTGCAGAAGCTATCTGGTCGGAGCTTCCACGGCAATCATCACATCAATGTGATCAATTTTTCACCCCAGGTGATGTAAGGTAAAGTTATCAAAATTTTTGAGAGGGTTAAGTCTCTTTATGATATTATCTCAATCAAATATATTAGTTACTGGCACAACCTGATGTTTCTCTTTTCAGGCCAAGTGTGAAAATGAATCTTGTTAACAGCTAAAAGAGCAAATTACAAGGTCAAGGGAAGTGCACAAGTACATGTGATGGGGAGTCAAAAGAAGGTAAACCATTCCTGCCCCTGTTCCTGACCTGAATAAGAGCTGAGTCTTTTCAGTTATCCTACTTTTCAAGATAATCTTAGAATGCATTCGTATTAATCATGATAGTATTAGAGATTACAATGCCTCTTTTTGTCTTGGTAAAATGGAGGAGCTGAATGACTTCTTCTGCTTTTTCTTCTTCCTTAAAAAAATCAATCTGTTTTACCTTGATTACAAGCATCAATACATTTACGCGAGTCCCCATCCACCCTAGAGGAAAGCATAGCTCTTGGTTGCAAATAATTCTTAAGATTCTCTTCACCATGAGAATGCATGTGTCAGAATGTCCTTGGTTAATGAAGATTTTTCTGAATCTCCTGACGAATCTTGACCTCTGCAATGTCTTGCTCTGAGTTTTTCACCTGGAGAAGTTCTCAAAATAACCTTTGATATAAGACCCGGTTAACATCATCAGCTACTTCAAATTTAACTCTATATTCATCTTCAAGGCTATTTTGTTTTTTTCTGTAGTACTTTTTAAAACTTAATACGTACATCACTATTAATAGATGATCCATCATGAGGATGGTGGAGGTTTTGTCTTCCGTGGAATTTCAATAAAACTTGTTTTCTGTGGAGCCTGATTAAACAGTTGGTTAGCACGGCACCTCGGGTGGTGGGTCTATGAGATTTTGGAATGAAATTTCCATATCATGGTGTTTCTTCTCAGCTCATAAGGTTAACTGATGCATGCAGCCACAACGGATTTCAATGCTTTTGGTGAAATTAGACATGACCTTCCACTTATTTTTATTGCTCTTTGTTTTAACTCAAAATGGCAGTCAAACATGTTGTCTGTTGAGTTGTAAACCTGTTGCTTGTTTGGCACTTCAAGTGGGTCTGTGAGATTTTGGAGAAAGTTCCATTTCATGGTGTTCCTTCTCTGTCTCATAAGGCTAACTGATGCTTGAAGCCATGACAGGTTCCTATGCTTTTGAGTTGATTCATGTTTTGAAAACTTTAGTTTCTTTCCCACCCCTCATCGAACTCCCTTTTTTCGTGATATTACAAAGGTAATCCCTGTTTTTTTATTCTTATTACTCACTCTCTCTGTTTTATACACAATGAAGATTTGGAGGTTTTCATTTATTGATGTTCAATCAAACATGTTGCCTCTTTCCTGTCAAGCTAAAGAACTGTTGCTTGGCACGGCACTTCATTTGGGTTTATGAGATTTTGGGAGAAGTTTCATTTTTTGGTCTTTCTTTTCTGTTCCCTAGGCATACCTTGCAGCCATGCTGGGTTTCCAAGCTTTTGAGCTGATCGTTTTTGGCATTGCAAAGTTCAATTTTTTTTTTGTCACTAAATCACTGTTTTGGTGAAACTATACGACTTCCTACTTTTCTTGTTCTTATTACTCTCTCCGGTATAACTCAAAAATCAATTTAACATGTTCTGTCTTGAGCTGAATTTTTTGCTTGGCGTGGCACCTCAGGTGGGAATATGAGATTTAAGAGAAAGTTTCATTTCATGATGCATCTTCTCTGTCTCATAAGGCTAACTGATGCTTGCAGCGATGACAGATTTCTAACCTTGTGAGCTGATTCGTGTCTTGGCTTAAAGTTCGGTTTCCTTTCCCCCTTCAGCAAACCATCCTTTTCGTGAAATTACACATGACCTTCCTCTTTTCTTGTTCTTATTACTCTCTCTGCTCCTTTTTAAAAAACCATGACGATTTGTAGGTTCTCTTCCTTGGAAGTTCAATAAAAATTTGTATGATTTCACAAGGGTTGTTGAGAACTTGGTTTCAAACAGCTTTGATGCAGGTACCTCCACGGTGTACTAATTTACTCTTTCAAAGTTTCAATATTTCTTTATAATTTTACTATGTATGTAGAATTATTTTGATTAGTTATTGTAGCTGAAGTTGAGTTGGAACATACATATTGGTGCCTCGATACTTATAGCCCAGCTTATGGAGACAATAAATGTGTCTGCTTCTTTTGTCTTCTGTTATGCTTCCTTTTCATCGCCATTTTAACTGTGGTTTCATATGCTTTCTTTACACCTGTGACATCAAAAAATTTTGTATGACTAATTGTGAATTTTTAGCGATGCAAAATTGGTACTGCCATTCAGATGATATGCATGCCTTCCCAGCAAGCTTTGGCCTTACACAAGAGGCTCTGAGCCCTATTTCTGATGTTTCTTTGTAGGAATTGTTACCATGGGAGGCCAAATGGATATTGTAAGGTTTAGGAGGTAAAGTTCTTTTGAGTTTTTGTAAGAAGTATCCATTAGGATAGGCATACAACTACTAACCTGGTCTTTGTTTTGGCCATTGTTTACAGGACAACAAGTGTTTTGTACGTTGAATTGATGATTGGTACAAAAGGTAATTTTGTATAAGCCTACATGAGTTGTTTGTTGTTTGCAAATAAGAGAATTTCTTGGGTTTTTGTTTTTTTGCAGTAATTGTTCATGATATATTTTACGACTAACCAGTTCGAAGGAAGCAAATGCACTCCGAACACTTCTAGTTTCCTCAAAATCAAACAAGTAGAAAGTAATGATTTACATATTTCTACTTCTAAAGTTGTACTTTGATATGATTGATCTTTTGGTTTGCTTATATAATTTTGAAGTCCAAGTATAGGGTCTCGCATTCTCCGAAAGATCTCTACTAAGAATTTCTCTTGCGCATCGTTTTGTGTCCTGCAAAATTGTTGATATTGAAAGGTTCATCTTTGATACACTAGCTAATTTAAGGATATTTCCTGTCTGGTTTCTTAGATTTTGTTCATTTGCATGCAGTGAGGATGACCTGCTTTGCACACGTGCTTCTCCTTGTCCTTGCTGCTGTTGTCCAGTGGGTTTGGGATTCATCTGGGTTCCCTTAAAAATTGAATCCAAGCGCTGGTTCATTCAAGTTTTCAGGATGCCTCTCAGGTCCTGATGTTTACACAATGAGGGTATACATGCCCAAATTGATGGATAAAGAGATGTGATAAGTCATCTTTTCTACACGTTGTTTCCCTAACAACCACGGATTAATTTGCAGGTCCTTCAGTATTTCATTATCCACTTATTTTAGTATGTTGTCAAGGAAACAGAAACCTAATCTTTGGTTAATATTCACTATACTGGATGCTTGTTTTTTGTACGATGTCTTTGTTTTCCTTGACCTCCGTAATGCAAATATCAATTCAAGATTTGTTTCCAAAGGACCAATAAATAAATTACTTAACAACATAGCTATGAGTTTTGGCAGTGCATCTGACATTGAGAAGCAAAATAGATCTCAGATATATCCACTGTTTTTGGAGCCTTCAAAGACATTTGTGGAATTTAAGGTGAGATTTTTTGTTGGGATTTATGTTTTAATATGGTTTGGGGTTGGGAAACGAATGTGGGTCTTTGGATATGTTTTTATAGAATTGTTTGTGTTAGGGTTTGTTTTGTGAGAATTGGTTTGGGATGTTTTCTGGAAAAAAAATAATTGAAAATATTTCATCATTTTTTTCTGGAACTTCAATGTGGATGAAATTAATAGGTTAAAACTGGCTACACGTCATTATTTATTACTAATCGTATAGGATTTCAAAGTATAAAGAGGACCCCTGACAAGGCAAGGCCCTTCCTCAACAGCTGTTCCCGGAGAACAATTAAATACCACGTTTCTAGCTTCTTTTGGTTGTGAAACCAAACAGTCCAATGTTAACAAGGACAGGCCAATGCTCTCAATTTTAATGCTTGTTCTAAAGATGATATGGAGAGTACAGGGGGACCTGATCTCTCTCTTGTTCTAACGAAATGAAGGAAATTCAAGAATTTGTTTAAGGATGTCCAAGTTCTTTTCTACGTTTTGTAGGGGAGATGGGGAGCAGCAGTGACAGGGGTTTACTAGTATTGACAACTCCGATCAAGACCCTAAACCCTAAACCCTAATTCAATTTTCTATCTATCTTGGTATTCTTCCATCCATTGAAAAAGAAAGAAAATTCATGAACTTGTTAGCTTTTTAAAGCTACTACATTGGTAATCAATTTGTTGGCATATTTTAATGAAATGAAAGAAATTCTTAAATTCAAGAAATATGTTCTTTTTTCTAAAAATTATGTTGTCATTCTTGCAGGATATGTTAAGGATGTTCAAACGGTTTTCAACAACCTTGAAGGCCCCACTCTCACAGCTTAAAAAAAAGTTTAATTATTAAGGTGTGTTTTATAGTAATTTGAATGAAGTAAGACAGACTTTCTCAAACGATCTCAGTGCCCTTAGATGGTCTAGTGTTTGACTTCGGTTGTTTCTTAAAAATGGAAAATTGTGCTAAGAGAAAAAAGGGGAATCTTTTCTGATTTTGTTAATGTTTTGATGATTAGTAGAGATTGGCTGCTGAGATCATCATAGTTAAATGACTTCTTTTCGTGTTTATTATTCTTATAAGTAGTGTACTCCTAGTTTGAACTTTAACCCAGTTTCCACCAGGTATCTGTTGCTATAGGCAATGGGACCTGCAAAGTTAAGGTGAATGATTTTGACATTGATCTAATGCATTTTGATGTGCAGAAAGTTCTGCTCAATTTATTATTTTACTTCATCTTCTGAGGCTGTACTTTTTTTCTCACGGAATGGACTGGTGTTGATGGGAGAAAGATATGGTAATGTTTTTGCAAAATGTTGGATTGACATCATCTTTTCTCTTGTATTCATACTGCTGTATATACGTTCTTTTGCCTGACAACTATGATGTTCATATCTTGGAATGGATGTTGTAGTCTATAGGATTGCATGCATTACAAAACTGATTGGCTGTTACAGTTTATGTTCATTAGTGTCCTTTTACAGATGTTCTTATATTTACTTTTCGTGGTTTTACTTGTAATTGGAAAAACTAGTATGATGATGACTACTGTATGTTGAGCTCTTTTGATTATTTTTGGATACATATATTGGTGCTTAGTGTACGTTTAGCCCAGCTTATGGAGACAGTATATGCTTCCTTTTGTTCTGTCCATTTTAACGATGGTTTTGTATGCTTGCTTTACACCAGCGACATCAAAATACAATAATTTTGATGATTTGCATGCTTTCCCAGCCATTCAAGAAATCTTTTTTAAAACACTGCGTTATTCTTGCAGTGTGTGTTGAGGATGTTTAAGAATTTGTTTTTACCTTTTGAGTGAGATGGGAAGCATTAAGTGAATGCCTGAGGCTTTGGAGCTCAATTCTGTCACAGGGGTTATCTTGTATTATTTCACAAGGGTTGTTGAGGAGTTGGTTTTCAGCAGCCCAGATGCTGGTGCCACCAAGGTACTAATTTACCCTTTCAAAGTTTCAATATTCCTTATGATCTTTCTAGGTATTGAATGGAAAGATGTGCAGTTGTTCTTGAAGACCTTACCTGCAAAACTCTAAAAATTTTTTAGTAGTTTAATTATAAGACGTTGTGATTTGTAGTATTTTGAAAGAAGACACTCGTTGGACAGATTTTCGTGAACGCGTGCACTGGCCATTTTTCCTTTACATGGGCTAGTCTTTTTTGACTTCGGTTGTTTCTTAAAAATGGAAAATCGTGCCATGTAAGAGAATGGAGAATTATACTGTTCATCTATTTTGATTTTGTTTATGTTCTGAGGATCAGTAAAGATGGACTGCTGAGAACATCATATGTTCCTTTGTTTGCTATTTCTGATGGCTAGGGCATATGCTTTATTTGAAATTTTTTATTCTCTTTCCAGGTTCCATCAATATATCCACGTGAACCACCAAAAGTCAAGTGCAAGACCAAGGCACAACTGTTTTTCCTTCTCTTCCACTTGCATATATTCTGACATGAGCCAGAGAAGATGACTCTCATTAGCTTTCTGTGTGAGATGCAGGTATATCATCCTAATATCGATTTGGAGAGTAATATATACCTCAACATACTAAGAGAAGGTTGAAACCCGTTCTCAGTATCAACACAATTAGCCATGGATTGTATCTTCGTTTCACGGTACATTATGGTTCTCAGCAACATATTAGTTTGTCACATACATATGTGCAATAAATATAAAGTCACTTTATCCCATTCTATACCTGTGCAGGAACCAAACCATGAGGATCCCCTTAATCTCGAGGCTGCTGCTGTTGAGAGATAATCCTGAGTTTAAATAAAATGTGAAAAGGGCTATGCATTGTGGAACTGTAGTGAATATAAGCTTCACGCAATGCATGTAACCTGTCCTCTGGTGCTGGTAATAGTGTTTCTGATTAGATGCTGTATCATTTTGAGGTGTGCTGGGTTGTATATGGTGTCCGCAAACTTGCAGTGCCATCTTATCTGAGTGTGTCATTTTAGCTTTAAGTTCTTTGACGTGTATCCATTGATGTATCTGTTATGCTGGCTGAACAGCATGTCATGAACATAAAGTAAACAAATGGAATGGTTATATATAGACGAAAGAGCATTGCCTA</genome_strand>
        <mrna_strand>GAATTACAGAAGACCGGGGAACTTCATACGCTACTCTGCTGAAGTTGTACGCTACCGGCCCTTAACACTCCGGTGACGATGTACGATCAAAACTATTCAATACCAGCGCTTAACTTTCCAGTGACGGCGATAATACCTACTGCCAAGATTCGCTACTCTTATCTTG....................................................................................................................................................................................................................AAGCTATCTGGTCGGAGCTTCCACGGCAATCATCACATCAATGTGATCAATTTTTCACCCCAGGTGATGTAAG...................................................................................................GCCAAGTGTGAAAATGAATCTTGTTAACAGCTAAAAGAGCAAATTACAAGGTCAAGGGAAGTGCACAAGTACATGTGATGGGGAGTCAAAAGAAGGTAAACCATTCCTGCCCCTGTTCCTGACCTGAATAAGAGCTGAGTCTTTTCAGTTATCCTACTTTTCAAGATAATCTTAGAATGCATTCGTATTAATCATGATAGTATTAGAGATTACAATGCCTCTTTTTGTCTTGGTAAAATGGAGGAGCTGAATGACTTCTTCTGCTTTTTCTTCTTCCTTAAAAAAATCAATCTGTTTTACCTTGATTACAAGCATCAATACATTTACGCGAGTCCCCATCCACCCTAGAGGAAAGCATAGCTCTTGGTTGCAAATAATTCTTAAGATTCTCTTCACCATGAGAATGCATGTGTCAGAATGTCCTTGGTTAATGAAGATTTTTCTGAATCTCCTGACGAATCTTGACCTCTGCAATGTCTTGCTCTGAGTTTTTCACCTGGAGAAGTTCTCAAAATAACCTTTGATATAAGACCCGGTTAACATCATCAGCTACTTCAAATTTAACTCTATATTCATCTTCAAGGCTATTTTGTTTTTTTCTGTAGTACTTTTTAAAACTTAATACGTACATCACTATTAATAGATGATCCATCATGAGGATGGTGGAGGTTTTGTCTTCCGTGGAATTTCAATAAAACTTGTTTTCTGTGGAGCCTGATTAAACAGTTGGTTAGCACGGCACCTCGGGTGGTGGGTCTATGAGATTTTGGAATGAAATTTCCATATCATGGTGTTTCTTCTCAGCTCATAAGGTTAACTGATGCATGCAGCCACAACGGATTTCAATGCTTTTGGTGAAATTAGACATGACCTTCCACTTATTTTTATTGCTCTTTGTTTTAACTCAAAATGGCAGTCAAACATGTTGTCTGTTGAGTTGTAAACCTGTTGCTTGTTTGGCACTTCAAGTGGGTCTGTGAGATTTTGGAGAAAGTTCCATTTCATGGTGTTCCTTCTCTGTCTCATAAGGCTAACTGATGCTTGAAGCCATGACAGGTTCCTATGCTTTTGAGTTGATTCATGTTTTGAAAACTTTAGTTTCTTTCCCACCCCTCATCGAACTCCCTTTTTTCGTGATATTACAAAGGTAATCCCTGTTTTTTTATTCTTATTACTCACTCTCTCTGTTTTATACACAATGAAGATTTGGAGGTTTTCATTTATTGATGTTCAATCAAACATGTTGCCTCTTTCCTGTCAAGCTAAAGAACTGTTGCTTGGCACGGCACTTCATTTGGGTTTATGAGATTTTGGGAGAAGTTTCATTTTTTGGTCTTTCTTTTCTGTTCCCTAGGCATACCTTGCAGCCATGCTGGGTTTCCAAGCTTTTGAGCTGATCGTTTTTGGCATTGCAAAGTTCAATTTTTTTTTTGTCACTAAATCACTGTTTTGGTGAAACTATACGACTTCCTACTTTTCTTGTTCTTATTACTCTCTCCGGTATAACTCAAAAATCAATTTAACATGTTCTGTCTTGAGCTGAATTTTTTGCTTGGCGTGGCACCTCAGGTGGGAATATGAGATTTAAGAGAAAGTTTCATTTCATGATGCATCTTCTCTGTCTCATAAGGCTAACTGATGCTTGCAGCGATGACAGATTTCTAACCTTGTGAGCTGATTCGTGTCTTGGCTTAAAGTTCGGTTTCCTTTCCCCCTTCAGCAAACCATCCTTTTCGTGAAATTACACATGACCTTCCTCTTTTCTTGTTCTTATTACTCTCTCTGCTCCTTTTTAAAAAACCATGACGATTTGTAGGTTCTCTTCCTTGGAAGTTCAATAAAAATTTGTATGATTTCACAAGGGTTGTTGAGAACTTGGTTTCAAACAGCTTTGATGCAGGTACCTCCACGGTGTACTAATTTACTCTTTCAAAGTTTCAATATTTCTTTATAATTTTACTATGTATGTAGAATTATTTTGATTAGTTATTGTAGCTGAAGTTGAGTTGGAACATACATATTGGTGCCTCGATACTTATAGCCCAGCTTATGGAGACAATAAATGTGTCTGCTTCTTTTGTCTTCTGTTATGCTTCCTTTTCATCGCCATTTTAACTGTGGTTTCATATGCTTTCTTTACACCTGTGACATCAAAAAATTTTGTATGACTAATTGTGAATTTTTAGCGATGCAAAATTGGTACTGCCATTCAGATGATATGCATGCCTTCCCAGCAAGCTTTGGCCTTACACAAGAGGCTCTGAGCCCTATTTCTGATGTTTCTTTGTAGGAATTGTTACCATGGGAGGCCAAATGGATATTGTAAGGTTTAGGAG.........................................................................................GACAACAAGTGTTTTGTACGTTGAATTGATGATTGGTACAAAAG.............................................................................TAATTGTTCATGATATATTTTACGACTAACCAGTTCGAAGGAAGCAAATGCACTCCGAACACTTCTAGTTTCCTCAAAATCAAACAAGTAGAAAGTAATGATTTACATATTTCTACTTCTAAAGTTGTACTTTGATATGATTGATCTTTTGGTTTGCTTATATAATTTTGAAGTCCAAGTATAGGGTCTCGCATTCTCCGAAAGATCTCTACTAAGAATTTCTCTTGCGCATCGTTTTGTGTCCTGCAAAATTGTTGATATTGAAAG...........................................................................TGAGGATGACCTGCTTTGCACACGTGCTTCTCCTTGTCCTTGCTGCTGTTGTCCAGTGGGTTTGGGATTCATCTGGGTTCCCTTAAAAATTGAATCCAAGCGCTGGTTCATTCAAGTTTTCAGGATGCCTCTCAGGTCCTGATGTTTACACAATGAGGGTATACATGCCCAAATTGATGGATAAAGAGATGTGATAAGTCATCTTTTCTACACGTTGTTTCCCTAACAACCACGGATTAATTTGCAGGTCCTTCAGTATTTCATTATCCACTTATTTTAGTATGTTGTCAAGGAAACAGAAACCTAATCTTTGGTTAATATTCACTATACTGGATGCTTGTTTTTTGTACGATGTCTTTGTTTTCCTTGACCTCCGTAATGCAAATATCAATTCAAGATTTGTTTCCAAAGGACCAATAAATAAATTACTTAACAACATAGCTATGAGTTTTGGCAGTGCATCTGACATTGAGAAGCAAAATAGATCTCAGATATATCCACTGTTTTTGGAGCCTTCAAAGACATTTGTGGAATTTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGTTAAGGATGTTCAAACGGTTTTCAACAACCTTGAAGGCCCCACTCTCACAGCTTAAAAAAAAGTTTAATTATTAAG................................................................................................................................................................................................................................................................................................................................................................AAAGTTCTGCTCAATTTATTATTTTACTTCATCTTCTGAGGCTGTACTTTTTTTCTCACGGAATGGACTGGTGTTGATGGGAGAAAGATATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTTATCTTGTATTATTTCACAAGGGTTGTTGAGGAGTTGGTTTTCAGCAGCCCAGATGCTGGTGCCACCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATCAATATATCCACGTGAACCACCAAAAGTCAAGTGCAAGACCAAGGCACAACTGTTTTTCCTTCTCTTCCACTTGCATATATTCTGACATGAGCCAGAGAAGATGACTCTCATTAGCTTTCTGTGTGAGATGCAGGTATATCATCCTAATATCGATTTGGAGAGTAATATATACCTCAACATACTAAGAGAAGGTTGAAACCCGTTCTCAGTATCAACACAATTAGCCATGGATTGTATCTTCGTTTCACG...........................................................................................GAACCAAACCATGAGGATCCCCTTAATCTCGAGGCTGCTGCTGTTGAGAGATAATCCTGAGTTTAAATAAAATGTGAAAAGGGCTATGCATTGTGGAACTGTAGTGAATATAAGCTTCACGCAATGCATGTAACCTGTCCTCTGGTGCTGGTAATAGTGTTTCTGATTAGATGCTGTATCATTTTGAGGTGTGCTGGGTTGTATATGGTGTCCGCAAACTTGCAGTGCCATCTTATCTGAGTGTGTCATTTTAGCTTTAAGTTCTTTGACGTGTATCCATTGATGTATCTGTTATGCTGGCTGAACAGCATGTCATGAACATAAAGTAAACAAATGGAATGGTTATATATAGACGAAAGAGCATTGCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578482" ref_strand="+" ref_description="SGN-U578482 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ggggaacttcatacgctactctgctgaagttgtacgctaccggcccttaacactccggtgacgatgtacgatcaaaactattcaataccagcgcttaactttccagtgacggcgataatacctactgccaagattcgctactcttatcttgaagctatctggtcggagcttccacggcaatcatcacatcaatgtgatcaatttttcaccccaggtgatgtaaggccaagtgtgaaaatgaatcttgttaacagctaaaagagcaaattacaaggtcaagggaagtgcacaagtacatgtgatggggagtcaaaagaaggaattgttaccatgggaggccaaatggatattgtaaggtttaggaggacaacaagtgttttgtacgttgaattgatgattggtacaaaagtgaggatgacctgctttgcacacgtgcttctccttgtccttgctgctgttgtccagtgggtttgggattcatctgggttcccttaaaaattgaatccaagcgctggttcattcaagttttcaggatgcctctcaggtcctgatgtttacacaatgagggtatacatgcccaaattgatggataaagagatgtgataagtcatcttttctacacgttgtttccctaacaaccacggattaatttgcagtgcatctgacattgagaagcaaatagatctcagatatattcactgtttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="-" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="83504" stop="78973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83204" g_stop="83054" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83053" i_stop="82842" i_length="212">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.506" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82841" g_stop="82769" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="224" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82768" i_stop="82670" i_length="99">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82669" g_stop="82575" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="319" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82574" i_stop="80380" i_length="2195">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80379" g_stop="80334" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="365" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80333" i_stop="80245" i_length="89">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.843" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80244" g_stop="80201" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="409" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80200" i_stop="79782" i_length="419">
            <donor d_prob="0.649" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79781" g_stop="79535" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="656" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="79534" i_stop="79325" i_length="210">
            <donor d_prob="0.644" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="79324" g_stop="79273" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="707" r_length="51" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="-" ref_id="SGN-U578482" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U578482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83204" e_stop="83054"/>
          <exon e_start="82841" e_stop="82769"/>
          <exon e_start="82669" e_stop="82575"/>
          <exon e_start="80379" e_stop="80334"/>
          <exon e_start="80244" e_stop="80201"/>
          <exon e_start="79781" e_stop="79535"/>
          <exon e_start="79324" e_stop="79273"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGAACTTCATACGCTACTCTGCTGAAGTTGTACGCTACCGGCCCTTAACACTCCGGTGACGATGTACGATCAAAACTATTCAATACCAGCGCTTAACTTTCCAGTGACGGCGATAATACCTACTGCCAAGATTCGCTACTCTTATCTTGGTAAATTCCTGAACTTGGAATTCTTGATTTAAGAAAAAAATCAAGAAATTGGTTTCTTTTTGAAGTTACTACATTGTTCATATGTTGAGGAATTAAAGAAATCGAATTTTTCAAGAATATGTTAGCATTGTAAATATCAAGAAAAATCAAAGAAAAGTTTTTTTAGCTTTTAGGGATGTGGGTAGCATTAAGAAAATTGCATCATTCTGCAGAAGCTATCTGGTCGGAGCTTCCACGGCAATCATCACATCAATGTGATCAATTTTTCACCCCAGGTGATGTAAGGTAAAGTTATCAAAATTTTTGAGAGGGTTAAGTCTCTTTATGATATTATCTCAATCAAATATATTAGTTACTGGCACAACCTGATGTTTCTCTTTTCAGGCCAAGTGTGAAAATGAATCTTGTTAACAGCTAAAAGAGCAAATTACAAGGTCAAGGGAAGTGCACAAGTACATGTGATGGGGAGTCAAAAGAAGGTAAACCATTCCTGCCCCTGTTCCTGACCTGAATAAGAGCTGAGTCTTTTCAGTTATCCTACTTTTCAAGATAATCTTAGAATGCATTCGTATTAATCATGATAGTATTAGAGATTACAATGCCTCTTTTTGTCTTGGTAAAATGGAGGAGCTGAATGACTTCTTCTGCTTTTTCTTCTTCCTTAAAAAAATCAATCTGTTTTACCTTGATTACAAGCATCAATACATTTACGCGAGTCCCCATCCACCCTAGAGGAAAGCATAGCTCTTGGTTGCAAATAATTCTTAAGATTCTCTTCACCATGAGAATGCATGTGTCAGAATGTCCTTGGTTAATGAAGATTTTTCTGAATCTCCTGACGAATCTTGACCTCTGCAATGTCTTGCTCTGAGTTTTTCACCTGGAGAAGTTCTCAAAATAACCTTTGATATAAGACCCGGTTAACATCATCAGCTACTTCAAATTTAACTCTATATTCATCTTCAAGGCTATTTTGTTTTTTTCTGTAGTACTTTTTAAAACTTAATACGTACATCACTATTAATAGATGATCCATCATGAGGATGGTGGAGGTTTTGTCTTCCGTGGAATTTCAATAAAACTTGTTTTCTGTGGAGCCTGATTAAACAGTTGGTTAGCACGGCACCTCGGGTGGTGGGTCTATGAGATTTTGGAATGAAATTTCCATATCATGGTGTTTCTTCTCAGCTCATAAGGTTAACTGATGCATGCAGCCACAACGGATTTCAATGCTTTTGGTGAAATTAGACATGACCTTCCACTTATTTTTATTGCTCTTTGTTTTAACTCAAAATGGCAGTCAAACATGTTGTCTGTTGAGTTGTAAACCTGTTGCTTGTTTGGCACTTCAAGTGGGTCTGTGAGATTTTGGAGAAAGTTCCATTTCATGGTGTTCCTTCTCTGTCTCATAAGGCTAACTGATGCTTGAAGCCATGACAGGTTCCTATGCTTTTGAGTTGATTCATGTTTTGAAAACTTTAGTTTCTTTCCCACCCCTCATCGAACTCCCTTTTTTCGTGATATTACAAAGGTAATCCCTGTTTTTTTATTCTTATTACTCACTCTCTCTGTTTTATACACAATGAAGATTTGGAGGTTTTCATTTATTGATGTTCAATCAAACATGTTGCCTCTTTCCTGTCAAGCTAAAGAACTGTTGCTTGGCACGGCACTTCATTTGGGTTTATGAGATTTTGGGAGAAGTTTCATTTTTTGGTCTTTCTTTTCTGTTCCCTAGGCATACCTTGCAGCCATGCTGGGTTTCCAAGCTTTTGAGCTGATCGTTTTTGGCATTGCAAAGTTCAATTTTTTTTTTGTCACTAAATCACTGTTTTGGTGAAACTATACGACTTCCTACTTTTCTTGTTCTTATTACTCTCTCCGGTATAACTCAAAAATCAATTTAACATGTTCTGTCTTGAGCTGAATTTTTTGCTTGGCGTGGCACCTCAGGTGGGAATATGAGATTTAAGAGAAAGTTTCATTTCATGATGCATCTTCTCTGTCTCATAAGGCTAACTGATGCTTGCAGCGATGACAGATTTCTAACCTTGTGAGCTGATTCGTGTCTTGGCTTAAAGTTCGGTTTCCTTTCCCCCTTCAGCAAACCATCCTTTTCGTGAAATTACACATGACCTTCCTCTTTTCTTGTTCTTATTACTCTCTCTGCTCCTTTTTAAAAAACCATGACGATTTGTAGGTTCTCTTCCTTGGAAGTTCAATAAAAATTTGTATGATTTCACAAGGGTTGTTGAGAACTTGGTTTCAAACAGCTTTGATGCAGGTACCTCCACGGTGTACTAATTTACTCTTTCAAAGTTTCAATATTTCTTTATAATTTTACTATGTATGTAGAATTATTTTGATTAGTTATTGTAGCTGAAGTTGAGTTGGAACATACATATTGGTGCCTCGATACTTATAGCCCAGCTTATGGAGACAATAAATGTGTCTGCTTCTTTTGTCTTCTGTTATGCTTCCTTTTCATCGCCATTTTAACTGTGGTTTCATATGCTTTCTTTACACCTGTGACATCAAAAAATTTTGTATGACTAATTGTGAATTTTTAGCGATGCAAAATTGGTACTGCCATTCAGATGATATGCATGCCTTCCCAGCAAGCTTTGGCCTTACACAAGAGGCTCTGAGCCCTATTTCTGATGTTTCTTTGTAGGAATTGTTACCATGGGAGGCCAAATGGATATTGTAAGGTTTAGGAGGTAAAGTTCTTTTGAGTTTTTGTAAGAAGTATCCATTAGGATAGGCATACAACTACTAACCTGGTCTTTGTTTTGGCCATTGTTTACAGGACAACAAGTGTTTTGTACGTTGAATTGATGATTGGTACAAAAGGTAATTTTGTATAAGCCTACATGAGTTGTTTGTTGTTTGCAAATAAGAGAATTTCTTGGGTTTTTGTTTTTTTGCAGTAATTGTTCATGATATATTTTACGACTAACCAGTTCGAAGGAAGCAAATGCACTCCGAACACTTCTAGTTTCCTCAAAATCAAACAAGTAGAAAGTAATGATTTACATATTTCTACTTCTAAAGTTGTACTTTGATATGATTGATCTTTTGGTTTGCTTATATAATTTTGAAGTCCAAGTATAGGGTCTCGCATTCTCCGAAAGATCTCTACTAAGAATTTCTCTTGCGCATCGTTTTGTGTCCTGCAAAATTGTTGATATTGAAAGGTTCATCTTTGATACACTAGCTAATTTAAGGATATTTCCTGTCTGGTTTCTTAGATTTTGTTCATTTGCATGCAGTGAGGATGACCTGCTTTGCACACGTGCTTCTCCTTGTCCTTGCTGCTGTTGTCCAGTGGGTTTGGGATTCATCTGGGTTCCCTTAAAAATTGAATCCAAGCGCTGGTTCATTCAAGTTTTCAGGATGCCTCTCAGGTCCTGATGTTTACACAATGAGGGTATACATGCCCAAATTGATGGATAAAGAGATGTGATAAGTCATCTTTTCTACACGTTGTTTCCCTAACAACCACGGATTAATTTGCAGGTCCTTCAGTATTTCATTATCCACTTATTTTAGTATGTTGTCAAGGAAACAGAAACCTAATCTTTGGTTAATATTCACTATACTGGATGCTTGTTTTTTGTACGATGTCTTTGTTTTCCTTGACCTCCGTAATGCAAATATCAATTCAAGATTTGTTTCCAAAGGACCAATAAATAAATTACTTAACAACATAGCTATGAGTTTTGGCAGTGCATCTGACATTGAGAAGCAAAATAGATCTCAGATATATCCACTGTTTTTG</genome_strand>
        <mrna_strand>GGGGAACTTCATACGCTACTCTGCTGAAGTTGTACGCTACCGGCCCTTAACACTCCGGTGACGATGTACGATCAAAACTATTCAATACCAGCGCTTAACTTTCCAGTGACGGCGATAATACCTACTGCCAAGATTCGCTACTCTTATCTTG....................................................................................................................................................................................................................AAGCTATCTGGTCGGAGCTTCCACGGCAATCATCACATCAATGTGATCAATTTTTCACCCCAGGTGATGTAAG...................................................................................................GCCAAGTGTGAAAATGAATCTTGTTAACAGCTAAAAGAGCAAATTACAAGGTCAAGGGAAGTGCACAAGTACATGTGATGGGGAGTCAAAAGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTTACCATGGGAGGCCAAATGGATATTGTAAGGTTTAGGAG.........................................................................................GACAACAAGTGTTTTGTACGTTGAATTGATGATTGGTACAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGATGACCTGCTTTGCACACGTGCTTCTCCTTGTCCTTGCTGCTGTTGTCCAGTGGGTTTGGGATTCATCTGGGTTCCCTTAAAAATTGAATCCAAGCGCTGGTTCATTCAAGTTTTCAGGATGCCTCTCAGGTCCTGATGTTTACACAATGAGGGTATACATGCCCAAATTGATGGATAAAGAGATGTGATAAGTCATCTTTTCTACACGTTGTTTCCCTAACAACCACGGATTAATTTGCAG..................................................................................................................................................................................................................TGCATCTGACATTGAGAAGC-AAATAGATCTCAGATATATTCACTGTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573348" ref_strand="+" ref_description="SGN-U573348 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|46241274|gb|AAS82860.1| (e_value=9e-140) geranyl diphosphate synthase large subunit [Antirrhinum majus]; (*ATH) AT4G36810.1 (e_value=1e-125)  Symbol: None | geranylgeranyl pyrophosphate synthase (GGPS1) / GGPP synthetase / farnesyltranstransferase, identical to GI:413730 to geranylgeranyl pyrophosphate synthase, chloroplast precursor GB:P34802 from (Arabidopsis thaliana) synonymous with f... ; (*SWP) sp|Q42698|GGPPS_CATRO (e_value=7e-136) Geranylgeranyl pyrophosphate synthetase, chloroplastic OS=Catharanthus roseus GN=GGPS1; ">
      <seq>ggtagtggacccttaatgttgaaacttctgtacagcttcggatatcctaaacttgcaatctccttcttcttcatctatctttgcgaaacctaattaactgagaaattaggtcgaaagaatgagtctttcaacaacaattacaacttggggatacacccatcatcccttttctgacgttggaaataaaggcagatccagatttcgctctccaggattcatgcctcatctgaagatgaaattcttcactaacccttcttctctttctgtctcagctcttcttacaaaggagcaagaaagcaagagcaagaaacaagcaatggagtttaaagaatacgttcttgaaaaggctgtttctgtcaacaaggctttggaatctgcagtctctatcaaggaaccggtcatgattcatgagtccatgaggtactctcttcttgctggtgggaaaagaattagacccatgttgtgtatagctgcttgtgagcttgttggtggggttgagtccacagccatgccagcagcttgtgctgttgaaatgattcacaccatgtctttgattcatgatgaccttccttgtatggataatgatgatcttagaagagggaaacctacaaatcacaagatttatggggaggatgtggctgttttagcaggggatgcacttcttgcattagcctttgagcacattgctactcatacaaaaggggtttcttctgatagaattgtgagggtgattggtgagttggcgaagtgtattggggcagagggacttgtagctggtcaggttgtagatataatttcagaaggcatttctgatgttgatttgaagcatttagagttcattcatctgcacaagactgcagctttgttagaagggtcagtggtgctaggggctatattaggaggtgcaccagatgaagatgtggaaaagctaagaaaatttgcaagatgtattggtttgttatttcaagttgtggatgatattcttgatgtcacaaagtcttctcagcaattggggaaaacagctgggaaggacttggttgctgataaggtaacttatcccaaactgataggtattgagaaatctagggagtttgctgaggagttaaacaaagaagcgaaagctcagcttgttggatttgatcaagagaaagcagctccattgtttgctcttgcaaattatattgcttacagagagaattaaattgtaacaacagaattctcagtgattcctgatagtattaaacaatgaatatatgaatttttggtcaaccaatttgtatatttaaagtttaagaagtaagtacaaggcaaggacatgagtgtgtacatttaaagattcaaacttctaacatcttgaatgaaataatggcccatacacgtttctattcttcttctccttatgatactcttcaactgatatctcattctgtggatgtatttggccattttttttgttaaagtctatttctagcttctatatgaagtcttatatgcagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="97258" stop="99355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97557" g_stop="99055" g_length="1499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1499" r_length="1499" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U573348" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97557" e_stop="99055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGTGGACCCTTAATGTTGAAACTTCTGTACAGCTTCGGATATCCTAAACTTGCAATCTCCTTCTTCTTCATCTATCTTTGCGAAACCTAATTAACTGAGAAATTAGGTCGAAAGAATGAGTCTTTCAACAACAATTACAACTTGGGGATACACCCATCATCCCTTTTCTGACGTTGGAAATAAAGGCAGATCCAGATTTCGCTCTCCAGGATTCATGCCTCATCTGAAGATGAAATTCTTCACTAACCCTTCTTCTCTTTCTGTCTCAGCTCTTCTTACAAAGGAGCAAGAAAGCAAGAGCAAGAAACAAGCAATGGAGTTTAAAGAATACGTTCTTGAAAAGGCTGTTTCTGTCAACAAGGCTTTGGAATCTGCAGTCTCTATCAAGGAACCGGTCATGATTCATGAGTCCATGAGGTACTCTCTTCTTGCTGGTGGGAAAAGAATTAGACCCATGTTGTGTATAGCTGCTTGTGAGCTTGTTGGTGGGGTTGAGTCCACAGCCATGCCAGCAGCTTGTGCTGTTGAAATGATTCACACCATGTCTTTGATTCATGATGACCTTCCTTGTATGGATAATGATGATCTTAGAAGAGGGAAACCTACAAATCACAAGATTTATGGGGAGGATGTGGCTGTTTTAGCAGGGGATGCACTTCTTGCATTAGCCTTTGAGCACATTGCTACTCATACAAAAGGGGTTTCTTCTGATAGAATTGTGAGGGTGATTGGTGAGTTGGCGAAGTGTATTGGGGCAGAGGGACTTGTAGCTGGTCAGGTTGTAGATATAATTTCAGAAGGCATTTCTGATGTTGATTTGAAGCATTTAGAGTTCATTCATCTGCACAAGACTGCAGCTTTGTTAGAAGGGTCAGTGGTGCTAGGGGCTATATTAGGAGGTGCACCAGATGAAGATGTGGAAAAGCTAAGAAAATTTGCAAGATGTATTGGTTTGTTATTTCAAGTTGTGGATGATATTCTTGATGTCACAAAGTCTTCTCAGCAATTGGGGAAAACAGCTGGGAAGGACTTGGTTGCTGATAAGGTAACTTATCCCAAACTGATAGGTATTGAGAAATCTAGGGAGTTTGCTGAGGAGTTAAACAAAGAAGCGAAAGCTCAGCTTGTTGGATTTGATCAAGAGAAAGCAGCTCCATTGTTTGCTCTTGCAAATTATATTGCTTACAGAGAGAATTAAATTGTAACAACAGAATTCTCAGTGATTCCTGATAGTATTAAACAATGAATATATGAATTTTTGGTCAACCAATTTGTATATTTAAAGTTTAAGAAGTAAGTACAAGGCAAGGACATGAGTGTGTACATTTAAAGATTCAAACTTCTAACATCTTGAATGAAATAATGGCCCATACACGTTTCTATTCTTCTTCTCCTTATGATACTCTTCAACTGATATCTCATTCTGTGGATGTATTTGGCCATTTTTTTTGTTAAAGTCTATTTCTAGCTTCTATATGAAGTCTTATATGCAGCTT</genome_strand>
        <mrna_strand>GGTAGTGGACCCTTAATGTTGAAACTTCTGTACAGCTTCGGATATCCTAAACTTGCAATCTCCTTCTTCTTCATCTATCTTTGCGAAACCTAATTAACTGAGAAATTAGGTCGAAAGAATGAGTCTTTCAACAACAATTACAACTTGGGGATACACCCATCATCCCTTTTCTGACGTTGGAAATAAAGGCAGATCCAGATTTCGCTCTCCAGGATTCATGCCTCATCTGAAGATGAAATTCTTCACTAACCCTTCTTCTCTTTCTGTCTCAGCTCTTCTTACAAAGGAGCAAGAAAGCAAGAGCAAGAAACAAGCAATGGAGTTTAAAGAATACGTTCTTGAAAAGGCTGTTTCTGTCAACAAGGCTTTGGAATCTGCAGTCTCTATCAAGGAACCGGTCATGATTCATGAGTCCATGAGGTACTCTCTTCTTGCTGGTGGGAAAAGAATTAGACCCATGTTGTGTATAGCTGCTTGTGAGCTTGTTGGTGGGGTTGAGTCCACAGCCATGCCAGCAGCTTGTGCTGTTGAAATGATTCACACCATGTCTTTGATTCATGATGACCTTCCTTGTATGGATAATGATGATCTTAGAAGAGGGAAACCTACAAATCACAAGATTTATGGGGAGGATGTGGCTGTTTTAGCAGGGGATGCACTTCTTGCATTAGCCTTTGAGCACATTGCTACTCATACAAAAGGGGTTTCTTCTGATAGAATTGTGAGGGTGATTGGTGAGTTGGCGAAGTGTATTGGGGCAGAGGGACTTGTAGCTGGTCAGGTTGTAGATATAATTTCAGAAGGCATTTCTGATGTTGATTTGAAGCATTTAGAGTTCATTCATCTGCACAAGACTGCAGCTTTGTTAGAAGGGTCAGTGGTGCTAGGGGCTATATTAGGAGGTGCACCAGATGAAGATGTGGAAAAGCTAAGAAAATTTGCAAGATGTATTGGTTTGTTATTTCAAGTTGTGGATGATATTCTTGATGTCACAAAGTCTTCTCAGCAATTGGGGAAAACAGCTGGGAAGGACTTGGTTGCTGATAAGGTAACTTATCCCAAACTGATAGGTATTGAGAAATCTAGGGAGTTTGCTGAGGAGTTAAACAAAGAAGCGAAAGCTCAGCTTGTTGGATTTGATCAAGAGAAAGCAGCTCCATTGTTTGCTCTTGCAAATTATATTGCTTACAGAGAGAATTAAATTGTAACAACAGAATTCTCAGTGATTCCTGATAGTATTAAACAATGAATATATGAATTTTTGGTCAACCAATTTGTATATTTAAAGTTTAAGAAGTAAGTACAAGGCAAGGACATGAGTGTGTACATTTAAAGATTCAAACTTCTAACATCTTGAATGAAATAATGGCCCATACACGTTTCTATTCTTCTTCTCCTTATGATACTCTTCAACTGATATCTCATTCTGTGGATGTATTTGGCCATTTTTTTTGTTAAAGTCTATTTCTAGCTTCTATATGAAGTCTTATATGCAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602468" ref_strand="+" ref_description="SGN-U602468 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>atatattagacttcaaaatttaacttcaaattttaattttgatcttcaactttcatagtacataaatacgcactttaattatcctactatttaataaataagcacgtgatttttatctgtcaaaacgcgtgaaaatcacgtattctacgcgcgtgaggagtaattttttaagctcacaacagaaaaaaatgctgaaatgacaattctaccaccccggattccgtccaatctccgacaacccaaaaaacccattcattttgcccaaccgttcttcttcttcctccacaccgaagcacaacccatgaagcgaacgaacttcaaactcgctgaacccaccaaatacttgaccccaaacccatcagatttgtcgtctccggcgagaatcatcaccaaactgctgcaaccagcagctcgaacaagacacaaaacagcagccaaatgaccccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="-" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="105304" stop="104257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105004" g_stop="104557" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="-" ref_id="SGN-U602468" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>448</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U602468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105004" e_stop="104557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATTAGACTTCAAAATTTAACTTCAAATTTTAATTTTGATCTTCAACTTTCATAGTACATAAATACGCACTTTAATTATCCTACTATTTAATAAATAAGCACGTGATTTTTATCTGTCAAAACGCGTGAAAATCACGTATTCTACGCGCGTGAGGAGTAATTTTTTAAGCTCACAACAGAAAAAAATGCTGAAATGACAATTCTACCACCCCGGATTCCGTCCAATCTCCGACAACCCAAAAAACCCATTCATTTTGCCCAACCGTTCTTCTTCTTCCTCCACACCGAAGCACAACCCATGAAGCGAACGAACTTCAAACTCGCTGAACCCACCAAATACTTGACCCCAAACCCATCAGATTTGTCGTCTCCGGCGAGAATCATCACCAAACTGCTGCAACCAGCAGCTCGAACAAGACACAAAACAGCAGCCAAATGACCCCCA</genome_strand>
        <mrna_strand>ATATATTAGACTTCAAAATTTAACTTCAAATTTTAATTTTGATCTTCAACTTTCATAGTACATAAATACGCACTTTAATTATCCTACTATTTAATAAATAAGCACGTGATTTTTATCTGTCAAAACGCGTGAAAATCACGTATTCTACGCGCGTGAGGAGTAATTTTTTAAGCTCACAACAGAAAAAAATGCTGAAATGACAATTCTACCACCCCGGATTCCGTCCAATCTCCGACAACCCAAAAAACCCATTCATTTTGCCCAACCGTTCTTCTTCTTCCTCCACACCGAAGCACAACCCATGAAGCGAACGAACTTCAAACTCGCTGAACCCACCAAATACTTGACCCCAAACCCATCAGATTTGTCGTCTCCGGCGAGAATCATCACCAAACTGCTGCAACCAGCAGCTCGAACAAGACACAAAACAGCAGCCAAATGACCCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562649" ref_strand="+" ref_description="SGN-U562649 Tomato 200607#2 [37 ESTs aligned] (*GB) gi|14423351|gb|AAK62358.1|AF384374_1 (e_value=3e-104) allene; (*ATH) AT3G25780.1 (e_value=2e-57)  Symbol: None | allene oxide cyclase, putative / early-responsive to dehydration protein, putative / ERD protein, putative, similar to allene oxide cyclase GI:8977961 from (Lycopersicon esculentum); similar to early-responsive to dehydration (ERD12) ... ; (*SWP) sp|Q9LS01|AOC3_ARATH (e_value=1e-56) Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3; ">
      <seq>ggccattacgggccggggatcagtatcaacaacaacctcatttaagtcttcttttttgaccgctagaaccaacaaattgttcagcaatggccactgtttcctcagcctctgctgctcttagaaccatttcttcttcctcatccaagctatcttctgccttccaaactaaaaagatccaatcttttaaactacctaaccctctcatttctcagaatcataaacttactaccacctctactactgcttccagatcattttcctgcaagagccagagcacctcaacagattcaactaacactgaagttcaagaacttagtgtctatgagatcaatgaacgtgatcgtggaagccctgcttatcttcgattgagccaaaagactgttaattcactcggagatcttgtcccctttagcaacaagctatatactgcagatctaaagaagagaattggaataacagcaggactctgcattctgatcaagcacgaagaagagaagaaaggagatcgctatgaagctgtttacagcttctacttcggcgattacggtcatatcgccgttcagggagcgtacttaacctatgaagaaacttacctagccgtcaccggtggatccggcatatttgcaggggtttccggtcaagtgaaattgcagcaactcattttccctttcaagctattttacactttttacttgaaggggatccccggtctgccatctgaattgttgtgtacggcggttcctccgtcgccgacggtggagccaacacctgaagctaaagcttgtgaggaaggggccgcactgaaaaattacactaattaagtgggggtgttgatgtgcaaatcacaacttttgttggggtcgttctgaaataatcaataactacgtgctctagaattaaaaaaaaaagtaacatcaacgtccttttattttgcaatttttggtatgttatttgtcgttttgttgggtaaaagtttaactgttttgttagtactttgtatgtatgcctattatctgaattgtatccctatgtgatacgttccatctttattataaagtccagaaaaagataaaaatgaaaaaattatttggtaatgaattcaaggacgtatttgttcgataactatttgaaccatagagttctcccttacaaaggagatttcatatccaaagagatcgaaattgagaccactatgctctgaagggcttgaatccaagacctcaccgcaaccctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0116F10-VDsZk/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0116F10.1" temp_strand="+" temp_description="C02HBa0116F10.1  AC226001.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0116F10 sequenced_by:kribb upload_account_name:korea">
        <position start="106771" stop="108756"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107071" g_stop="107349" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="297" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107350" i_stop="107437" i_length="88">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107438" g_stop="107559" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="419" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107560" i_stop="107640" i_length="81">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107641" g_stop="108456" g_length="816"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="1235" r_length="816" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0116F10.1" gen_strand="+" ref_id="SGN-U562649" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1217</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0116F10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562649" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107071" e_stop="107349"/>
          <exon e_start="107438" e_stop="107559"/>
          <exon e_start="107641" e_stop="108456"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAGTATCAACAACAACCTCATTTAAGTCTTCTTTTTTGACCGCTAGAACCAACAAATTGTTCAGCAATGGCCACTGTTTCCTCAGCCTCTGCTGCTCTTAGAACCATTTCTTCTTCCTCATCCAAGCTATCTTCTGCCTTCCAAACTAAAAAGATCCAATCTTTTAAACTACCTAACCCTCTCATTTCTCAGAATCATAAACTTACTACCACCTCTACTACTGCTTCCAGATCATTTTCCTGCAAGAGCCAGAGCACCTCAACAGATTCAACTAACAGTAAGAAAAGTTAACTTCTTTATCACATTTTTTTTATCAAACACCTTATGTTCAATCTGTGAATACTCAAAAATTTTCTTGATTTCAGCTGAAGTTCAAGAACTTAGTGTCTATGAGATCAATGAACGTGATCGTGGAAGCCCTGCTTATCTTCGATTGAGCCAAAAGACTGTTAATTCACTCGGAGATCTTGTCCCCTTTAGCAACAAGGTAACTTTCTCTTTGCAATCAAGATACCAGAACCTAGAACGAGTCTTTTTAATTCGTATGCTGATTCTTGGTATGTTGCAGCTATATACTGCAGATCTAAAGAAGAGAATTGGAATAACAGCAGGACTCTGCATTCTGATCAAGCACGAAGAAGAGAAGAAAGGAGATCGCTATGAAGCTGTTTACAGCTTCTACTTCGGCGATTACGGTCATATCGCCGTTCAGGGAGCGTACTTAACCTATGAAGAAACTTACCTAGCCGTCACCGGTGGATCCGGCATATTTGCAGGGGTTTCCGGTCAAGTGAAATTGCAGCAACTCATTTTCCCTTTCAAGCTATTTTACACTTTTTACTTGAAGGGGATCCCCGGTCTGCCATCTGAATTGTTGTGTACGGCGGTTCCTCCGTCGCCGACGGTGGAGCCAACACCTGAAGCTAAAGCTTGTGAGGAAGGGGCCGCACTGAAAAATTACACTAATTAAGTGGGGGTGTTGATGTGCAAATCACAACTTTTGTTGGGGTCGTTCTGAAATAATCAATAACTACGTGCTCTAGAATTAAAAAAAAAAGTAACATCAACGTCCTTTTATTTTGCAATTTTTGGTATGTTATTTGTCGTTTTGTTGGGTAAAAGTTTAACTGTTTTGTTAGTACTTTGTATGTATGCCTATTATCTGAATTGTATCCCTATGTGATACGTTCCATCTTTATTATAAAGTCCAGAAAAAGATAAAAATGAAAAAATTATTTGGTAATGAATTCAAGGACGTATTTGTTCGATAACTATTTGAACCATAGAGTTCTCCCTTACAAAGGAGATTTCATATCCAAAGAGATCGAAATTGAGACCACTATGCTCTGAAGGGCTTGAATCCAAGACCTCACCGCAACCCTCG</genome_strand>
        <mrna_strand>ATCAGTATCAACAACAACCTCATTTAAGTCTTCTTTTTTGACCGCTAGAACCAACAAATTGTTCAGCAATGGCCACTGTTTCCTCAGCCTCTGCTGCTCTTAGAACCATTTCTTCTTCCTCATCCAAGCTATCTTCTGCCTTCCAAACTAAAAAGATCCAATCTTTTAAACTACCTAACCCTCTCATTTCTCAGAATCATAAACTTACTACCACCTCTACTACTGCTTCCAGATCATTTTCCTGCAAGAGCCAGAGCACCTCAACAGATTCAACTAACA........................................................................................CTGAAGTTCAAGAACTTAGTGTCTATGAGATCAATGAACGTGATCGTGGAAGCCCTGCTTATCTTCGATTGAGCCAAAAGACTGTTAATTCACTCGGAGATCTTGTCCCCTTTAGCAACAAG.................................................................................CTATATACTGCAGATCTAAAGAAGAGAATTGGAATAACAGCAGGACTCTGCATTCTGATCAAGCACGAAGAAGAGAAGAAAGGAGATCGCTATGAAGCTGTTTACAGCTTCTACTTCGGCGATTACGGTCATATCGCCGTTCAGGGAGCGTACTTAACCTATGAAGAAACTTACCTAGCCGTCACCGGTGGATCCGGCATATTTGCAGGGGTTTCCGGTCAAGTGAAATTGCAGCAACTCATTTTCCCTTTCAAGCTATTTTACACTTTTTACTTGAAGGGGATCCCCGGTCTGCCATCTGAATTGTTGTGTACGGCGGTTCCTCCGTCGCCGACGGTGGAGCCAACACCTGAAGCTAAAGCTTGTGAGGAAGGGGCCGCACTGAAAAATTACACTAATTAAGTGGGGGTGTTGATGTGCAAATCACAACTTTTGTTGGGGTCGTTCTGAAATAATCAATAACTACGTGCTCTAGAATTAAAAAAAAAAGTAACATCAACGTCCTTTTATTTTGCAATTTTTGGTATGTTATTTGTCGTTTTGTTGGGTAAAAGTTTAACTGTTTTGTTAGTACTTTGTATGTATGCCTATTATCTGAATTGTATCCCTATGTGATACGTTCCATCTTTATTATAAAGTCCAGAAAAAGATAAAAATGAAAAAATTATTTGGTAATGAATTCAAGGACGTATTTGTTCGATAACTATTTGAACCATAGAGTTCTCCCTTACAAAGGAGATTTCATATCCAAAGAGATCGAAATTGAGACCACTATGCTCTGAAGGGCTTGAATCCAAGACCTCACCGCAACCCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>14</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="4912" PGL_stop="5092"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4912" e_stop="5092"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4912" e_stop="5092" e_length="181"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4912" stop="5092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598563" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCCCAAAAAAATTAAAACCTCTCCCATGCATGCAATTAGCCCCCCCACGCACGCAAAGATAAAAAGCCAACAATCATTCATCTCCACAAAAAGCTACCTTCCATTTCCCCACCCAAAGTTTTCAGAGCCATTCAACAGCTCTTCTATTAAAGCACACTAAAAACCCTCACGCCAATACTT</gDNA_template>
            <first_frame> C  P  K  K  L  K  P  L  P  C  M  Q  L  A  P  P  R  T  Q  R  *  K  A  N  N  H  S  S  P  Q  K  A  T  F  H  F  P  T  Q  S  F  Q  S  H  S  T  A  L  L  L  K  H  T  K  N  P  H  A  N  T  </first_frame>
            <second_frame>  A  Q  K  N  *  N  L  S  H  A  C  N  *  P  P  H  A  R  K  D  K  K  P  T  I  I  H  L  H  K  K  L  P  S  I  S  P  P  K  V  F  R  A  I  Q  Q  L  F  Y  *  S  T  L  K  T  L  T  P  I  L </second_frame>
            <third_frame>   P  K  K  I  K  T  S  P  M  H  A  I  S  P  P  T  H  A  K  I  K  S  Q  Q  S  F  I  S  T  K  S  Y  L  P  F  P  H  P  K  F  S  E  P  F  N  S  S  S  I  K  A  H  *  K  P  S  R  Q  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0116F10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="5141" PGL_stop="6531"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5141" e_stop="6531"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="5141" e_stop="6531" e_length="1391"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5141" stop="6531"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567228" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGACTTTGGATACGGCTAACAACAATTCTCTCCTTTTTTCAGAGAAATGAAAGTGCCCTTTTCCACTAATGATAACGTAAGTTCTAAGCCATTGGTTAACAGCAACAACAGCTTTACTTTTCCAGCCGCTACCAACGGTTCTAATTTGTGCTACGAACCTAAGTCAGTGCTCGAGCTCCGTCGTAGCCCAAGTCCTATAGTTGATAAGCAGATTATAACAACGAATCCTGATTTGTCTGCTCTTTGTGGTGGTGAAGATCCTCTTCAATTAGGAGATCATGTTCTGAGTAACTTTGAAGATTGGGATTCTTTGATGAGAGAACTTGGCTTGCACGACGATTCTGCTTCGCTTTCAAAAACGAATCCTCTCACCCACAGCGAATCGCTGACTCAGTTCCATAATCTCTCCGAGTTTTCAGCTGAATCGAATCAGTTTCCTAGTCCTGATTTTTCTTTCTCAGACACTAATTTCCCTCAGCAGTTTCCGACGGTGAATCAGGCAAGTTTCATCAACGCCCTTGATCTCTCCGGGGATATCCACCAGAATTGGAGCGTAGGATTTGATTATGTGGATGAACTCATTCGTTTTGCTGAGTGTTTCGAAACAAACGCTTTCCAACTCGCACATGTGATACTGGCACGCCTCAATCAACGGCTCAGATCCGCAGCAGGAAAACCTCTCCAACGAGCTGCCTTTTACTTCAAGGAAGCACTTCAAGCGCAGCTCGCCGGATCAGCTCGGCAAACTCGTTCTTCAAGTTCCTCCGACGTAATTCAAACGATTAAATCTTATAAAATATTGTCAAATATTTCTCCGATCCCTATGTTCTCTAGCTTCACGGCGAATCAGGCCGTGCTTGAGGCAGTTGACGGCTCCATGCTAGTCCACGTCATCGATTTCGACATCGGACTTGGTGGTCACTGGGCTTCCTTCATGAAAGAGTTAGCCGACAAAGCCGAGTGCCGTAAAGCCAACGCGCCGATCCTTAGAATTACGGCTCTAGTTCCTGAAGAGTACGCTGTGGAATCAAGGTTAATTAGAGAAAATTTAACCCAATTTGCTCGTGAACTCAATATCGGTTTCGAAATTGATTTTGTCCTAATTCGTACATTCGAATTGTTATCCTTCAAAGCGATAAAGTTCATGGAGGGAGAGAAGACAGCGGTGCTTTTATCTCCCGCTATCTTCCGACGGGTCGGGTCAGGGTTTGTAAATGAACTCCGTCGAATATCCCCTAACGTGGTGGTACACGTGGACAGCGAAGGACTTATGGGTTACGGTGCAATGTCTTTCCGGCAGACAGTAATCGACGGGCTGGAATTTTACTCTACACTACTGGAATCACTGGAGGCAGCAAATATCGGTGGTGGAAATTGCGGGGATTGGATG</gDNA_template>
            <first_frame> E  T  L  D  T  A  N  N  N  S  L  L  F  S  E  K  *  K  C  P  F  P  L  M  I  T  *  V  L  S  H  W  L  T  A  T  T  A  L  L  F  Q  P  L  P  T  V  L  I  C  A  T  N  L  S  Q  C  S  S  S  V  V  A  Q  V  L  *  L  I  S  R  L  *  Q  R  I  L  I  C  L  L  F  V  V  V  K  I  L  F  N  *  E  I  M  F  *  V  T  L  K  I  G  I  L  *  *  E  N  L  A  C  T  T  I  L  L  R  F  Q  K  R  I  L  S  P  T  A  N  R  *  L  S  S  I  I  S  P  S  F  Q  L  N  R  I  S  F  L  V  L  I  F  L  S  Q  T  L  I  S  L  S  S  F  R  R  *  I  R  Q  V  S  S  T  P  L  I  S  P  G  I  S  T  R  I  G  A  *  D  L  I  M  W  M  N  S  F  V  L  L  S  V  S  K  Q  T  L  S  N  S  H  M  *  Y  W  H  A  S  I  N  G  S  D  P  Q  Q  E  N  L  S  N  E  L  P  F  T  S  R  K  H  F  K  R  S  S  P  D  Q  L  G  K  L  V  L  Q  V  P  P  T  *  F  K  R  L  N  L  I  K  Y  C  Q  I  F  L  R  S  L  C  S  L  A  S  R  R  I  R  P  C  L  R  Q  L  T  A  P  C  *  S  T  S  S  I  S  T  S  D  L  V  V  T  G  L  P  S  *  K  S  *  P  T  K  P  S  A  V  K  P  T  R  R  S  L  E  L  R  L  *  F  L  K  S  T  L  W  N  Q  G  *  L  E  K  I  *  P  N  L  L  V  N  S  I  S  V  S  K  L  I  L  S  *  F  V  H  S  N  C  Y  P  S  K  R  *  S  S  W  R  E  R  R  Q  R  C  F  Y  L  P  L  S  S  D  G  S  G  Q  G  L  *  M  N  S  V  E  Y  P  L  T  W  W  Y  T  W  T  A  K  D  L  W  V  T  V  Q  C  L  S  G  R  Q  *  S  T  G  W  N  F  T  L  H  Y  W  N  H  W  R  Q  Q  I  S  V  V  E  I  A  G  I  G   </first_frame>
            <second_frame>  R  L  W  I  R  L  T  T  I  L  S  F  F  Q  R  N  E  S  A  L  F  H  *  *  *  R  K  F  *  A  I  G  *  Q  Q  Q  Q  L  Y  F  S  S  R  Y  Q  R  F  *  F  V  L  R  T  *  V  S  A  R  A  P  S  *  P  K  S  Y  S  *  *  A  D  Y  N  N  E  S  *  F  V  C  S  L  W  W  *  R  S  S  S  I  R  R  S  C  S  E  *  L  *  R  L  G  F  F  D  E  R  T  W  L  A  R  R  F  C  F  A  F  K  N  E  S  S  H  P  Q  R  I  A  D  S  V  P  *  S  L  R  V  F  S  *  I  E  S  V  S  *  S  *  F  F  F  L  R  H  *  F  P  S  A  V  S  D  G  E  S  G  K  F  H  Q  R  P  *  S  L  R  G  Y  P  P  E  L  E  R  R  I  *  L  C  G  *  T  H  S  F  C  *  V  F  R  N  K  R  F  P  T  R  T  C  D  T  G  T  P  Q  S  T  A  Q  I  R  S  R  K  T  S  P  T  S  C  L  L  L  Q  G  S  T  S  S  A  A  R  R  I  S  S  A  N  S  F  F  K  F  L  R  R  N  S  N  D  *  I  L  *  N  I  V  K  Y  F  S  D  P  Y  V  L  *  L  H  G  E  S  G  R  A  *  G  S  *  R  L  H  A  S  P  R  H  R  F  R  H  R  T  W  W  S  L  G  F  L  H  E  R  V  S  R  Q  S  R  V  P  *  S  Q  R  A  D  P  *  N  Y  G  S  S  S  *  R  V  R  C  G  I  K  V  N  *  R  K  F  N  P  I  C  S  *  T  Q  Y  R  F  R  N  *  F  C  P  N  S  Y  I  R  I  V  I  L  Q  S  D  K  V  H  G  G  R  E  D  S  G  A  F  I  S  R  Y  L  P  T  G  R  V  R  V  C  K  *  T  P  S  N  I  P  *  R  G  G  T  R  G  Q  R  R  T  Y  G  L  R  C  N  V  F  P  A  D  S  N  R  R  A  G  I  L  L  Y  T  T  G  I  T  G  G  S  K  Y  R  W  W  K  L  R  G  L  D  </second_frame>
            <third_frame>   D  F  G  Y  G  *  Q  Q  F  S  P  F  F  R  E  M  K  V  P  F  S  T  N  D  N  V  S  S  K  P  L  V  N  S  N  N  S  F  T  F  P  A  A  T  N  G  S  N  L  C  Y  E  P  K  S  V  L  E  L  R  R  S  P  S  P  I  V  D  K  Q  I  I  T  T  N  P  D  L  S  A  L  C  G  G  E  D  P  L  Q  L  G  D  H  V  L  S  N  F  E  D  W  D  S  L  M  R  E  L  G  L  H  D  D  S  A  S  L  S  K  T  N  P  L  T  H  S  E  S  L  T  Q  F  H  N  L  S  E  F  S  A  E  S  N  Q  F  P  S  P  D  F  S  F  S  D  T  N  F  P  Q  Q  F  P  T  V  N  Q  A  S  F  I  N  A  L  D  L  S  G  D  I  H  Q  N  W  S  V  G  F  D  Y  V  D  E  L  I  R  F  A  E  C  F  E  T  N  A  F  Q  L  A  H  V  I  L  A  R  L  N  Q  R  L  R  S  A  A  G  K  P  L  Q  R  A  A  F  Y  F  K  E  A  L  Q  A  Q  L  A  G  S  A  R  Q  T  R  S  S  S  S  S  D  V  I  Q  T  I  K  S  Y  K  I  L  S  N  I  S  P  I  P  M  F  S  S  F  T  A  N  Q  A  V  L  E  A  V  D  G  S  M  L  V  H  V  I  D  F  D  I  G  L  G  G  H  W  A  S  F  M  K  E  L  A  D  K  A  E  C  R  K  A  N  A  P  I  L  R  I  T  A  L  V  P  E  E  Y  A  V  E  S  R  L  I  R  E  N  L  T  Q  F  A  R  E  L  N  I  G  F  E  I  D  F  V  L  I  R  T  F  E  L  L  S  F  K  A  I  K  F  M  E  G  E  K  T  A  V  L  L  S  P  A  I  F  R  R  V  G  S  G  F  V  N  E  L  R  R  I  S  P  N  V  V  V  H  V  D  S  E  G  L  M  G  Y  G  A  M  S  F  R  Q  T  V  I  D  G  L  E  F  Y  S  T  L  L  E  S  L  E  A  A  N  I  G  G  G  N  C  G  D  W  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5161" stop="6531"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1371</number_coding_nucleotides>
                  <number_encoded_amino_acids>457</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QQFSPFFREMKVPFSTNDNVSSKPLVNSNNSFTFPAATNGSNLCYEPKSVLELRRSPSPIVDKQIITTNPDLSALCGGEDPLQLGDHVLSNFEDWDSLMRELGLHDDSASLSKTNPLTHSESLTQFHNLSEFSAESNQFPSPDFSFSDTNFPQQFPTVNQASFINALDLSGDIHQNWSVGFDYVDELIRFAECFETNAFQLAHVILARLNQRLRSAAGKPLQRAAFYFKEALQAQLAGSARQTRSSSSSDVIQTIKSYKILSNISPIPMFSSFTANQAVLEAVDGSMLVHVIDFDIGLGGHWASFMKELADKAECRKANAPILRITALVPEEYAVESRLIRENLTQFARELNIGFEIDFVLIRTFELLSFKAIKFMEGEKTAVLLSPAIFRRVGSGFVNELRRISPNVVVHVDSEGLMGYGAMSFRQTVIDGLEFYSTLLESLEAANIGGGNCGDWM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="17561" PGL_stop="7371"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17561" e_stop="17367"/>
            <exon e_start="13164" e_stop="13041"/>
            <exon e_start="12905" e_stop="12858"/>
            <exon e_start="12771" e_stop="12685"/>
            <exon e_start="12569" e_stop="12480"/>
            <exon e_start="12352" e_stop="12192"/>
            <exon e_start="12107" e_stop="12053"/>
            <exon e_start="11919" e_stop="11871"/>
            <exon e_start="11788" e_stop="11583"/>
            <exon e_start="10772" e_stop="10695"/>
            <exon e_start="8174" e_stop="8049"/>
            <exon e_start="7766" e_stop="7371"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.995"/>
          <exon-intron don_prob="1.000" acc_prob="0.884" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.631" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.959"/>
          <exon-intron don_prob="0.998" acc_prob="0.947" e_score="0.985"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.769" e_score="1.000"/>
          <exon-only e_score="0.826"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="17561" e_stop="17367" e_length="195"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17366" i_stop="13165" i_length="4202"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13164" e_stop="13041" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.884">
            <gDNA_intron_boundary i_start="13040" i_stop="12906" i_length="135"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12905" e_stop="12858" e_length="48"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.981">
            <gDNA_intron_boundary i_start="12857" i_stop="12772" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12771" e_stop="12685" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.631">
            <gDNA_intron_boundary i_start="12684" i_stop="12570" i_length="115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="12569" e_stop="12480" e_length="90"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="12479" i_stop="12353" i_length="127"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="12352" e_stop="12192" e_length="161"/>
          </exon>
          <intron i_serial="6" don_prob="0.984" acc_prob="0.997">
            <gDNA_intron_boundary i_start="12191" i_stop="12108" i_length="84"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="12107" e_stop="12053" e_length="55"/>
          </exon>
          <intron i_serial="7" don_prob="0.969" acc_prob="0.992">
            <gDNA_intron_boundary i_start="12052" i_stop="11920" i_length="133"/>
          </intron>
          <exon e_serial="8" e_score="0.959">
            <gDNA_exon_boundary e_start="11919" e_stop="11871" e_length="49"/>
          </exon>
          <intron i_serial="8" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="11870" i_stop="11789" i_length="82"/>
          </intron>
          <exon e_serial="9" e_score="0.985">
            <gDNA_exon_boundary e_start="11788" e_stop="11583" e_length="206"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.947">
            <gDNA_intron_boundary i_start="11582" i_stop="10773" i_length="810"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="10772" e_stop="10695" e_length="78"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10694" i_stop="8175" i_length="2520"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="8174" e_stop="8049" e_length="126"/>
          </exon>
          <intron i_serial="11" don_prob="0.998" acc_prob="0.769">
            <gDNA_intron_boundary i_start="8048" i_stop="7767" i_length="282"/>
          </intron>
          <exon e_serial="12" e_score="0.826">
            <gDNA_exon_boundary e_start="7766" e_stop="7371" e_length="396"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17561" stop="17367"/>
              <exon start="13164" stop="13041"/>
              <exon start="12905" stop="12858"/>
              <exon start="12771" stop="12685"/>
              <exon start="12569" stop="12480"/>
              <exon start="12352" stop="12192"/>
              <exon start="12107" stop="12053"/>
              <exon start="11919" stop="11871"/>
              <exon start="11788" stop="11583"/>
              <exon start="10772" stop="10695"/>
              <exon start="8174" stop="8049"/>
              <exon start="7766" stop="7371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574396" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTTTGACTAAACCGTCTTCTTTCTTTCTTCAAAGTTTCAAACCCAAGAACCAAGATTCTGTTTTCTTTATGGCTGCTCTTTGTTTAGGATAATTTTTTTCTTCTTAAATCTCTTTGGGGGTGGGATAACAAACTTAACTTTTTGGAAAATCCGACTTGGAACCTTCTTGTTCCACCTCAGATTCACTACACAG : CCTTTCGCTGAGCAAGCCATTTTTGGATTATTCCCGTGGATACCTGCATATACAATTGATTGACCCAATGGGAGCTGGGGAAGAGAGCACTCCTACAAAGACTTCAAAGCCTCCTTTAACTCAG : GAGACACCAACCGCACCTTCATATCCTGATTGGTCAAGCTCTATGCAG : GCTTATTATAGTGCTGGAGCTACTCCTCCTTTTTTTGCCTCACCTGTTGCTTCTCCTGCTCCCCACCCATACATGTGGGGAGGTCAG : CATCCTCTTATGCCTCCTTATGGGACTCCAGTTCCATATCCAGCTTTATATCCTCCTGCCGGAGTTTATGCTCATCCTAACATTGCCACG : CCGGCTCCAAATTCTGTGCCGGCAAATCCTGAAGCAGATGGGAAGGGGCCTGAAGGAAAGGATCGGAATTCAAGTAAAAAGTTAAAGGTCTGTTCTGGTGGTAAGGCAGGCGACAATGGGAAAGTTACTTCAGGTTCCGGAAATGATGGTGCCACACAAAG : TGATGAAAGCAGAAGTGAAGGTACATCAGATACAAATGATGAAAATGATAACAAT : GAATTTGCTGCAAACAAGAAGGGAAGCTTTGATCAAATGCTTGCAGATG : GAGCCAGTGCACAGAATAATCCTGCGAAAGAGAATCACCCGACTTCTATACATGGAAATCCTGTCACCATGCCTGCAACTAACCTAAATATTGGAATGGACGTGTGGAATGCATCAGCTGCCGGTCCTGGAGCGATCAAAATACAGCAAAATGCAACTGGTCCAGTTATAGGACATGAAGGAAGGATGAATGATCAGTGGATTCAG : GAGGAACGTGAACTTAAAAGGCAAAAGAGAAAGCAATCTAATAGGGAGTCAGCTAGGAGGTCGAGGCTCCGCAAGCAG : GCAGAGTGTGAAGAGCTACAACGTAGAGTAGAAGCTTTGAGCCATGAGAATCATTCACTCAAAGATGAGCTCCAACGGCTCTCTGAGGAATGTGAGAAGCTTACCTCGGAGAATAATTTAATTAAG : GAAGAGTTAACGCTACTTTGTGGACCAGACGTTGTGTCTAAGCTGGAGAGAAACGATAATGTCACACGTATTCAATCTAATGTTGAAGAAGCTAGTTAAGGAGAAGTGGAAAAGCCAGGACTGAGTAGGTGATTTTTGTTACAAAGTGCTCACAGATCATTGCCTTTTTGGTGCAGTGTTTGTTGTCCTACTAACCTATACCCTCCTTTAACTCCCTTTCTGAGTATGACTGTAACATATATTTCTTATGATTCTAACCCCAGTGTTAAAAGAGTCTTGAGTCTGTTTAACTTAGTCTTTAAATTAACTTCAGTAGCTCAGAAAGTCTTCAAGTGAATGTTAACGAGGCACCCAACCACATGGGTTGTGGTACCCTGGTGGAATTGCTTTAGCTTT</gDNA_template>
            <first_frame> Y  F  D  *  T  V  F  F  L  S  S  K  F  Q  T  Q  E  P  R  F  C  F  L  Y  G  C  S  L  F  R  I  I  F  F  F  L  N  L  F  G  G  G  I  T  N  L  T  F  W  K  I  R  L  G  T  F  L  F  H  L  R  F  T  T  Q  :  P  F  A  E  Q  A  I  F  G  L  F  P  W  I  P  A  Y  T  I  D  *  P  N  G  S  W  G  R  E  H  S  Y  K  D  F  K  A  S  F  N  S   : G  D  T  N  R  T  F  I  S  *  L  V  K  L  Y  A   : G  L  L  *  C  W  S  Y  S  S  F  F  C  L  T  C  C  F  S  C  S  P  P  I  H  V  G  R  S   : A  S  S  Y  A  S  L  W  D  S  S  S  I  S  S  F  I  S  S  C  R  S  L  C  S  S  *  H  C  H   : A  G  S  K  F  C  A  G  K  S  *  S  R  W  E  G  A  *  R  K  G  S  E  F  K  *  K  V  K  G  L  F  W  W  *  G  R  R  Q  W  E  S  Y  F  R  F  R  K  *  W  C  H  T  K  :  *  *  K  Q  K  *  R  Y  I  R  Y  K  *  *  K  *  *  Q   : *  I  C  C  K  Q  E  G  K  L  *  S  N  A  C  R  W :   S  Q  C  T  E  *  S  C  E  R  E  S  P  D  F  Y  T  W  K  S  C  H  H  A  C  N  *  P  K  Y  W  N  G  R  V  E  C  I  S  C  R  S  W  S  D  Q  N  T  A  K  C  N  W  S  S  Y  R  T  *  R  K  D  E  *  S  V  D  S   : G  G  T  *  T  *  K  A  K  E  K  A  I  *  *  G  V  S  *  E  V  E  A  P  Q  A   : G  R  V  *  R  A  T  T  *  S  R  S  F  E  P  *  E  S  F  T  Q  R  *  A  P  T  A  L  *  G  M  *  E  A  Y  L  G  E  *  F  N  *   : G  R  V  N  A  T  L  W  T  R  R  C  V  *  A  G  E  K  R  *  C  H  T  Y  S  I  *  C  *  R  S  *  L  R  R  S  G  K  A  R  T  E  *  V  I  F  V  T  K  C  S  Q  I  I  A  F  L  V  Q  C  L  L  S  Y  *  P  I  P  S  F  N  S  L  S  E  Y  D  C  N  I  Y  F  L  *  F  *  P  Q  C  *  K  S  L  E  S  V  *  L  S  L  *  I  N  F  S  S  S  E  S  L  Q  V  N  V  N  E  A  P  N  H  M  G  C  G  T  L  V  E  L  L  *  L  </first_frame>
            <second_frame>  I  L  T  K  P  S  S  F  F  L  Q  S  F  K  P  K  N  Q  D  S  V  F  F  M  A  A  L  C  L  G  *  F  F  S  S  *  I  S  L  G  V  G  *  Q  T  *  L  F  G  K  S  D  L  E  P  S  C  S  T  S  D  S  L  H  S :   L  S  L  S  K  P  F  L  D  Y  S  R  G  Y  L  H  I  Q  L  I  D  P  M  G  A  G  E  E  S  T  P  T  K  T  S  K  P  P  L  T  Q  :  E  T  P  T  A  P  S  Y  P  D  W  S  S  S  M  Q  :  A  Y  Y  S  A  G  A  T  P  P  F  F  A  S  P  V  A  S  P  A  P  H  P  Y  M  W  G  G  Q  :  H  P  L  M  P  P  Y  G  T  P  V  P  Y  P  A  L  Y  P  P  A  G  V  Y  A  H  P  N  I  A  T  :  P  A  P  N  S  V  P  A  N  P  E  A  D  G  K  G  P  E  G  K  D  R  N  S  S  K  K  L  K  V  C  S  G  G  K  A  G  D  N  G  K  V  T  S  G  S  G  N  D  G  A  T  Q  S :   D  E  S  R  S  E  G  T  S  D  T  N  D  E  N  D  N  N  :  E  F  A  A  N  K  K  G  S  F  D  Q  M  L  A  D   : G  A  S  A  Q  N  N  P  A  K  E  N  H  P  T  S  I  H  G  N  P  V  T  M  P  A  T  N  L  N  I  G  M  D  V  W  N  A  S  A  A  G  P  G  A  I  K  I  Q  Q  N  A  T  G  P  V  I  G  H  E  G  R  M  N  D  Q  W  I  Q  :  E  E  R  E  L  K  R  Q  K  R  K  Q  S  N  R  E  S  A  R  R  S  R  L  R  K  Q  :  A  E  C  E  E  L  Q  R  R  V  E  A  L  S  H  E  N  H  S  L  K  D  E  L  Q  R  L  S  E  E  C  E  K  L  T  S  E  N  N  L  I  K  :  E  E  L  T  L  L  C  G  P  D  V  V  S  K  L  E  R  N  D  N  V  T  R  I  Q  S  N  V  E  E  A  S  *  G  E  V  E  K  P  G  L  S  R  *  F  L  L  Q  S  A  H  R  S  L  P  F  W  C  S  V  C  C  P  T  N  L  Y  P  P  L  T  P  F  L  S  M  T  V  T  Y  I  S  Y  D  S  N  P  S  V  K  R  V  L  S  L  F  N  L  V  F  K  L  T  S  V  A  Q  K  V  F  K  *  M  L  T  R  H  P  T  T  W  V  V  V  P  W  W  N  C  F  S  F </second_frame>
            <third_frame>   F  *  L  N  R  L  L  S  F  F  K  V  S  N  P  R  T  K  I  L  F  S  L  W  L  L  F  V  *  D  N  F  F  L  L  K  S  L  W  G  W  D  N  K  L  N  F  L  E  N  P  T  W  N  L  L  V  P  P  Q  I  H  Y  T   : A  F  R  *  A  S  H  F  W  I  I  P  V  D  T  C  I  Y  N  *  L  T  Q  W  E  L  G  K  R  A  L  L  Q  R  L  Q  S  L  L  *  L  R :   R  H  Q  P  H  L  H  I  L  I  G  Q  A  L  C  R :   L  I  I  V  L  E  L  L  L  L  F  L  P  H  L  L  L  L  L  L  P  T  H  T  C  G  E  V  S :   I  L  L  C  L  L  M  G  L  Q  F  H  I  Q  L  Y  I  L  L  P  E  F  M  L  I  L  T  L  P  R :   R  L  Q  I  L  C  R  Q  I  L  K  Q  M  G  R  G  L  K  E  R  I  G  I  Q  V  K  S  *  R  S  V  L  V  V  R  Q  A  T  M  G  K  L  L  Q  V  P  E  M  M  V  P  H  K   : V  M  K  A  E  V  K  V  H  Q  I  Q  M  M  K  M  I  T  M :   N  L  L  Q  T  R  R  E  A  L  I  K  C  L  Q  M  :  E  P  V  H  R  I  I  L  R  K  R  I  T  R  L  L  Y  M  E  I  L  S  P  C  L  Q  L  T  *  I  L  E  W  T  C  G  M  H  Q  L  P  V  L  E  R  S  K  Y  S  K  M  Q  L  V  Q  L  *  D  M  K  E  G  *  M  I  S  G  F  R :   R  N  V  N  L  K  G  K  R  E  S  N  L  I  G  S  Q  L  G  G  R  G  S  A  S  R :   Q  S  V  K  S  Y  N  V  E  *  K  L  *  A  M  R  I  I  H  S  K  M  S  S  N  G  S  L  R  N  V  R  S  L  P  R  R  I  I  *  L  R :   K  S  *  R  Y  F  V  D  Q  T  L  C  L  S  W  R  E  T  I  M  S  H  V  F  N  L  M  L  K  K  L  V  K  E  K  W  K  S  Q  D  *  V  G  D  F  C  Y  K  V  L  T  D  H  C  L  F  G  A  V  F  V  V  L  L  T  Y  T  L  L  *  L  P  F  *  V  *  L  *  H  I  F  L  M  I  L  T  P  V  L  K  E  S  *  V  C  L  T  *  S  L  N  *  L  Q  *  L  R  K  S  S  S  E  C  *  R  G  T  Q  P  H  G  L  W  Y  P  G  G  I  A  L  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17422" stop="17367"/>
                    <exon start="13164" stop="13041"/>
                    <exon start="12905" stop="12858"/>
                    <exon start="12771" stop="12685"/>
                    <exon start="12569" stop="12480"/>
                    <exon start="12352" stop="12192"/>
                    <exon start="12107" stop="12053"/>
                    <exon start="11919" stop="11871"/>
                    <exon start="11788" stop="11583"/>
                    <exon start="10772" stop="10695"/>
                    <exon start="8174" stop="8049"/>
                    <exon start="7766" stop="7668"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1176</number_coding_nucleotides>
                  <number_encoded_amino_acids>392</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFGKSDLEPSCSTSDSLHSLSLSKPFLDYSRGYLHIQLIDPMGAGEESTPTKTSKPPLTQETPTAPSYPDWSSSMQAYYSAGATPPFFASPVASPAPHPYMWGGQHPLMPPYGTPVPYPALYPPAGVYAHPNIATPAPNSVPANPEADGKGPEGKDRNSSKKLKVCSGGKAGDNGKVTSGSGNDGATQSDESRSEGTSDTNDENDNNEFAANKKGSFDQMLADGASAQNNPAKENHPTSIHGNPVTMPATNLNIGMDVWNASAAGPGAIKIQQNATGPVIGHEGRMNDQWIQEERELKRQKRKQSNRESARRSRLRKQAECEELQRRVEALSHENHSLKDELQRLSEECEKLTSENNLIKEELTLLCGPDVVSKLERNDNVTRIQSNVEEAS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7634" stop="7431"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLLQSAHRSLPFWCSVCCPTNLYPPLTPFLSMTVTYISYDSNPSVKRVLSLFNLVFKLTSVAQKVFK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="38140" PGL_stop="40219"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38140" e_stop="38342"/>
            <exon e_start="38473" e_stop="38795"/>
            <exon e_start="39768" e_stop="40219"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="38140" e_stop="38342" e_length="203"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.939">
            <gDNA_intron_boundary i_start="38343" i_stop="38472" i_length="130"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38473" e_stop="38795" e_length="323"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="38796" i_stop="39767" i_length="972"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="39768" e_stop="40219" e_length="452"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38140" stop="38342"/>
              <exon start="38473" stop="38795"/>
              <exon start="39768" stop="40219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563285" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCACCTTAGTCTTCACTCCATCTATATAATTTTTTTTTCCCTTCAAAATAAATAAATAAAAGTCTTCTCCATTTCACTTTTACACCACAAAAAATAAATAAAAATATAAACACCATGAACCATCAGGTTATAGAAGATGATAATATGGTACTTATTTCCCAGTACTATCCTGATATTTACACCCAACTTGTACCACAACAAG : GAGAGTCAAAGCCGCGGAGAAGACGTAAGAAGAACAAATTAGGAGAAGGGAGTGGGAATGATCAAATGATGATGATGAGGAAGAGGAAGTTAAGTGAAGAACAAGTTAATTTACTTGAGCAAAGTTTTGGGGACGAGCACAAACTAGAGTCAGAGAGAAAGGACAAGCTAGCCGCTGAGCTAGGGCTCGACCCTAGACAAGTTGCGGTGTGGTTCCAAAACAGGAGGGCTCGTTGGAAGAGCAAGAAGCTAGAGGAGGAATATTCAAAGTTGAAATCTGAACATGACAATAATGTTGTTGAGAAGTGTCGTCTGGAAACTGAG : GTGTTGAAGTTGAAAGAACAATTGAATGAATCAGAGAAGGAGATACAAAGGCTATTATTAGAACGATGTGATGGGGTATCGAGTAATTACACAAGTCCAAGTGCTTCATCTTTCTCAATGGAAGCACCATTTCTAGGGGAATTTGGAATGGATGGATTGGACAATGTGTTTTATGCACAAGAGAATAATTATGTTCAAGGATTAGATTGGGTGAACTTATATATTTGATATAAATAATTATAAACATCATCATGTGATTAATTTCTAATTTTAGGATCCCATAATTCTATTTGTAGATAAGTAACCCCACTATATAACGTACTAAATTATGTAAATATATCTTTTTTTTTCCTTGCTTTTTTTCTAGACTAGTGTGGTAATTAGAGTTACTAGTATTTGACTAGCTAGCTAGCAAGTTGCAAGATGGAATATAACTTGGATTTTTATTTTAA</gDNA_template>
            <first_frame> S  T  L  V  F  T  P  S  I  *  F  F  F  P  F  K  I  N  K  *  K  S  S  P  F  H  F  Y  T  T  K  N  K  *  K  Y  K  H  H  E  P  S  G  Y  R  R  *  *  Y  G  T  Y  F  P  V  L  S  *  Y  L  H  P  T  C  T  T  T  R :   R  V  K  A  A  E  K  T  *  E  E  Q  I  R  R  R  E  W  E  *  S  N  D  D  D  E  E  E  E  V  K  *  R  T  S  *  F  T  *  A  K  F  W  G  R  A  Q  T  R  V  R  E  K  G  Q  A  S  R  *  A  R  A  R  P  *  T  S  C  G  V  V  P  K  Q  E  G  S  L  E  E  Q  E  A  R  G  G  I  F  K  V  E  I  *  T  *  Q  *  C  C  *  E  V  S  S  G  N  *   : G  V  E  V  E  R  T  I  E  *  I  R  E  G  D  T  K  A  I  I  R  T  M  *  W  G  I  E  *  L  H  K  S  K  C  F  I  F  L  N  G  S  T  I  S  R  G  I  W  N  G  W  I  G  Q  C  V  L  C  T  R  E  *  L  C  S  R  I  R  L  G  E  L  I  Y  L  I  *  I  I  I  N  I  I  M  *  L  I  S  N  F  R  I  P  *  F  Y  L  *  I  S  N  P  T  I  *  R  T  K  L  C  K  Y  I  F  F  F  P  C  F  F  S  R  L  V  W  *  L  E  L  L  V  F  D  *  L  A  S  K  L  Q  D  G  I  *  L  G  F  L  F  * </first_frame>
            <second_frame>  A  P  *  S  S  L  H  L  Y  N  F  F  F  P  S  K  *  I  N  K  S  L  L  H  F  T  F  T  P  Q  K  I  N  K  N  I  N  T  M  N  H  Q  V  I  E  D  D  N  M  V  L  I  S  Q  Y  Y  P  D  I  Y  T  Q  L  V  P  Q  Q   : G  E  S  K  P  R  R  R  R  K  K  N  K  L  G  E  G  S  G  N  D  Q  M  M  M  M  R  K  R  K  L  S  E  E  Q  V  N  L  L  E  Q  S  F  G  D  E  H  K  L  E  S  E  R  K  D  K  L  A  A  E  L  G  L  D  P  R  Q  V  A  V  W  F  Q  N  R  R  A  R  W  K  S  K  K  L  E  E  E  Y  S  K  L  K  S  E  H  D  N  N  V  V  E  K  C  R  L  E  T  E  :  V  L  K  L  K  E  Q  L  N  E  S  E  K  E  I  Q  R  L  L  L  E  R  C  D  G  V  S  S  N  Y  T  S  P  S  A  S  S  F  S  M  E  A  P  F  L  G  E  F  G  M  D  G  L  D  N  V  F  Y  A  Q  E  N  N  Y  V  Q  G  L  D  W  V  N  L  Y  I  *  Y  K  *  L  *  T  S  S  C  D  *  F  L  I  L  G  S  H  N  S  I  C  R  *  V  T  P  L  Y  N  V  L  N  Y  V  N  I  S  F  F  F  L  A  F  F  L  D  *  C  G  N  *  S  Y  *  Y  L  T  S  *  L  A  S  C  K  M  E  Y  N  L  D  F  Y  F   </second_frame>
            <third_frame>   H  L  S  L  H  S  I  Y  I  I  F  F  S  L  Q  N  K  *  I  K  V  F  S  I  S  L  L  H  H  K  K  *  I  K  I  *  T  P  *  T  I  R  L  *  K  M  I  I  W  Y  L  F  P  S  T  I  L  I  F  T  P  N  L  Y  H  N  K  :  E  S  Q  S  R  G  E  D  V  R  R  T  N  *  E  K  G  V  G  M  I  K  *  *  *  *  G  R  G  S  *  V  K  N  K  L  I  Y  L  S  K  V  L  G  T  S  T  N  *  S  Q  R  E  R  T  S  *  P  L  S  *  G  S  T  L  D  K  L  R  C  G  S  K  T  G  G  L  V  G  R  A  R  S  *  R  R  N  I  Q  S  *  N  L  N  M  T  I  M  L  L  R  S  V  V  W  K  L  R :   C  *  S  *  K  N  N  *  M  N  Q  R  R  R  Y  K  G  Y  Y  *  N  D  V  M  G  Y  R  V  I  T  Q  V  Q  V  L  H  L  S  Q  W  K  H  H  F  *  G  N  L  E  W  M  D  W  T  M  C  F  M  H  K  R  I  I  M  F  K  D  *  I  G  *  T  Y  I  F  D  I  N  N  Y  K  H  H  H  V  I  N  F  *  F  *  D  P  I  I  L  F  V  D  K  *  P  H  Y  I  T  Y  *  I  M  *  I  Y  L  F  F  S  L  L  F  F  *  T  S  V  V  I  R  V  T  S  I  *  L  A  S  *  Q  V  A  R  W  N  I  T  W  I  F  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38192" stop="38342"/>
                    <exon start="38473" stop="38795"/>
                    <exon start="39768" stop="39995"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INKSLLHFTFTPQKINKNINTMNHQVIEDDNMVLISQYYPDIYTQLVPQQGESKPRRRRKKNKLGEGSGNDQMMMMRKRKLSEEQVNLLEQSFGDEHKLESERKDKLAAELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLKSEHDNNVVEKCRLETEVLKLKEQLNESEKEIQRLLLERCDGVSSNYTSPSASSFSMEAPFLGEFGMDGLDNVFYAQENNYVQGLDWVNLYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="44944" PGL_stop="44275"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44944" e_stop="44275"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="44944" e_stop="44275" e_length="670"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44944" stop="44275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602368" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGATTATATATTATTACTCTTAAAGTACCTATTTATTTAATTGATTGATTTATTAACTATAAAGGATTTTTTAAGCAAAGAATCAAACGGTACGTACACGTAGCCCAATTAGCTGTTTTTGGAGATTTTTGCTTATTAAAATGGTGAATAATCCTACTTTAAGATTGTTTTAAGTCACGACTTAGGAGCTGTATTGGACCCTCAATAAATTACTCAAAAACAGCAAAGAGTAGAGTCGAATTTCAAACGATTAATGCAGGTAAAGTCATACAAGATTATTTACCCCTATGGGAATTACCAATAATACATTTTAAATAATCACCTATATAATTTTTTAGAGTACTACGCATTAATCTCTTCTCTTTTTTTTTGCTCGATTAATAATGATTGAATTATCTTTAAAAAATGTAATACAATGAATATGATTATTTCAATCTCAATAAGATATCTCAAATTTTCGTACGCTAGAATATGAAAAAAATGAAACTATGAAGCATTCCCCTACACAAGAATAACCTTATGTGTTATGTTAATGGCCTATAGTAAAACATTAAATTGAGTGAAGTGGTGTGGTTTAGGGCACTCAAAAGTCATAAAATATAACCCACCTATAAATGGCTAGAAAGTGTCCAAAATTAAGGCGTAAATTAGGGATTGCTGAATTTTAGT</gDNA_template>
            <first_frame> L  I  I  Y  Y  Y  S  *  S  T  Y  L  F  N  *  L  I  Y  *  L  *  R  I  F  *  A  K  N  Q  T  V  R  T  R  S  P  I  S  C  F  W  R  F  L  L  I  K  M  V  N  N  P  T  L  R  L  F  *  V  T  T  *  E  L  Y  W  T  L  N  K  L  L  K  N  S  K  E  *  S  R  I  S  N  D  *  C  R  *  S  H  T  R  L  F  T  P  M  G  I  T  N  N  T  F  *  I  I  T  Y  I  I  F  *  S  T  T  H  *  S  L  L  F  F  F  A  R  L  I  M  I  E  L  S  L  K  N  V  I  Q  *  I  *  L  F  Q  S  Q  *  D  I  S  N  F  R  T  L  E  Y  E  K  N  E  T  M  K  H  S  P  T  Q  E  *  P  Y  V  L  C  *  W  P  I  V  K  H  *  I  E  *  S  G  V  V  *  G  T  Q  K  S  *  N  I  T  H  L  *  M  A  R  K  C  P  K  L  R  R  K  L  G  I  A  E  F  *  </first_frame>
            <second_frame>  *  L  Y  I  I  T  L  K  V  P  I  Y  L  I  D  *  F  I  N  Y  K  G  F  F  K  Q  R  I  K  R  Y  V  H  V  A  Q  L  A  V  F  G  D  F  C  L  L  K  W  *  I  I  L  L  *  D  C  F  K  S  R  L  R  S  C  I  G  P  S  I  N  Y  S  K  T  A  K  S  R  V  E  F  Q  T  I  N  A  G  K  V  I  Q  D  Y  L  P  L  W  E  L  P  I  I  H  F  K  *  S  P  I  *  F  F  R  V  L  R  I  N  L  F  S  F  F  L  L  D  *  *  *  L  N  Y  L  *  K  M  *  Y  N  E  Y  D  Y  F  N  L  N  K  I  S  Q  I  F  V  R  *  N  M  K  K  M  K  L  *  S  I  P  L  H  K  N  N  L  M  C  Y  V  N  G  L  *  *  N  I  K  L  S  E  V  V  W  F  R  A  L  K  S  H  K  I  *  P  T  Y  K  W  L  E  S  V  Q  N  *  G  V  N  *  G  L  L  N  F  S </second_frame>
            <third_frame>   D  Y  I  L  L  L  L  K  Y  L  F  I  *  L  I  D  L  L  T  I  K  D  F  L  S  K  E  S  N  G  T  Y  T  *  P  N  *  L  F  L  E  I  F  A  Y  *  N  G  E  *  S  Y  F  K  I  V  L  S  H  D  L  G  A  V  L  D  P  Q  *  I  T  Q  K  Q  Q  R  V  E  S  N  F  K  R  L  M  Q  V  K  S  Y  K  I  I  Y  P  Y  G  N  Y  Q  *  Y  I  L  N  N  H  L  Y  N  F  L  E  Y  Y  A  L  I  S  S  L  F  F  C  S  I  N  N  D  *  I  I  F  K  K  C  N  T  M  N  M  I  I  S  I  S  I  R  Y  L  K  F  S  Y  A  R  I  *  K  K  *  N  Y  E  A  F  P  Y  T  R  I  T  L  C  V  M  L  M  A  Y  S  K  T  L  N  *  V  K  W  C  G  L  G  H  S  K  V  I  K  Y  N  P  P  I  N  G  *  K  V  S  K  I  K  A  *  I  R  D  C  *  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0116F10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="47883" PGL_stop="56161"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47883" e_stop="48041"/>
            <exon e_start="48119" e_stop="48182"/>
            <exon e_start="48275" e_stop="48414"/>
            <exon e_start="49553" e_stop="49837"/>
            <exon e_start="49939" e_stop="50061"/>
            <exon e_start="50161" e_stop="50466"/>
            <exon e_start="51723" e_stop="51809"/>
            <exon e_start="52254" e_stop="52321"/>
            <exon e_start="52776" e_stop="52842"/>
            <exon e_start="53462" e_stop="53596"/>
            <exon e_start="53694" e_stop="53774"/>
            <exon e_start="54445" e_stop="54499"/>
            <exon e_start="54694" e_stop="54798"/>
            <exon e_start="54873" e_stop="54944"/>
            <exon e_start="55366" e_stop="55490"/>
            <exon e_start="55730" e_stop="56161"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.870" e_score="0.987"/>
          <exon-intron don_prob="0.999" acc_prob="0.923" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.770" e_score="1.000"/>
          <exon-intron don_prob="0.753" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.849" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.778" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.887" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.893" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.248" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.564" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="47883" e_stop="48041" e_length="159"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.870">
            <gDNA_intron_boundary i_start="48042" i_stop="48118" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="48119" e_stop="48182" e_length="64"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.923">
            <gDNA_intron_boundary i_start="48183" i_stop="48274" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48275" e_stop="48414" e_length="140"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.770">
            <gDNA_intron_boundary i_start="48415" i_stop="49552" i_length="1138"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="49553" e_stop="49837" e_length="285"/>
          </exon>
          <intron i_serial="4" don_prob="0.753" acc_prob="0.974">
            <gDNA_intron_boundary i_start="49838" i_stop="49938" i_length="101"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="49939" e_stop="50061" e_length="123"/>
          </exon>
          <intron i_serial="5" don_prob="0.849" acc_prob="0.995">
            <gDNA_intron_boundary i_start="50062" i_stop="50160" i_length="99"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="50161" e_stop="50466" e_length="306"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.992">
            <gDNA_intron_boundary i_start="50467" i_stop="51722" i_length="1256"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="51723" e_stop="51809" e_length="87"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.778">
            <gDNA_intron_boundary i_start="51810" i_stop="52253" i_length="444"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="52254" e_stop="52321" e_length="68"/>
          </exon>
          <intron i_serial="8" don_prob="0.997" acc_prob="0.969">
            <gDNA_intron_boundary i_start="52322" i_stop="52775" i_length="454"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="52776" e_stop="52842" e_length="67"/>
          </exon>
          <intron i_serial="9" don_prob="0.992" acc_prob="0.887">
            <gDNA_intron_boundary i_start="52843" i_stop="53461" i_length="619"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="53462" e_stop="53596" e_length="135"/>
          </exon>
          <intron i_serial="10" don_prob="0.916" acc_prob="0.943">
            <gDNA_intron_boundary i_start="53597" i_stop="53693" i_length="97"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="53694" e_stop="53774" e_length="81"/>
          </exon>
          <intron i_serial="11" don_prob="0.893" acc_prob="0.993">
            <gDNA_intron_boundary i_start="53775" i_stop="54444" i_length="670"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="54445" e_stop="54499" e_length="55"/>
          </exon>
          <intron i_serial="12" don_prob="0.957" acc_prob="0.248">
            <gDNA_intron_boundary i_start="54500" i_stop="54693" i_length="194"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="54694" e_stop="54798" e_length="105"/>
          </exon>
          <intron i_serial="13" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54799" i_stop="54872" i_length="74"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="54873" e_stop="54944" e_length="72"/>
          </exon>
          <intron i_serial="14" don_prob="0.564" acc_prob="0.922">
            <gDNA_intron_boundary i_start="54945" i_stop="55365" i_length="421"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="55366" e_stop="55490" e_length="125"/>
          </exon>
          <intron i_serial="15" don_prob="0.958" acc_prob="0.990">
            <gDNA_intron_boundary i_start="55491" i_stop="55729" i_length="239"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="55730" e_stop="56161" e_length="432"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47883" stop="48041"/>
              <exon start="48119" stop="48182"/>
              <exon start="48275" stop="48414"/>
              <exon start="49553" stop="49837"/>
              <exon start="49939" stop="50061"/>
              <exon start="50161" stop="50466"/>
              <exon start="51723" stop="51809"/>
              <exon start="52254" stop="52321"/>
              <exon start="52776" stop="52842"/>
              <exon start="53462" stop="53596"/>
              <exon start="53694" stop="53774"/>
              <exon start="54445" stop="54499"/>
              <exon start="54694" stop="54798"/>
              <exon start="54873" stop="54944"/>
              <exon start="55366" stop="55490"/>
              <exon start="55730" stop="56161"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563307" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGCCATGGCCATGGACTAGAGATGAAAACCACAAGTCAAACTCCAATCTCTAATCGAAAGAGACGATGGCGGATACACTCGCTGCTCTTAGGTCTTTAATGTCCTCTCACTCTCCTTCTCTTCATGCTCTGATTATTCCTTCCGAAGATTATCATCAG : AGCGAATATGTATCGGCACGGGACAAAAGACGCGCATTTGTTTCTGGATTCACCGGAAGTGCTG : GTTTGGCGCTTATAACCATGGATGAAGCACTTTTATGGACCGATGGCAGGTATTTCTTACAAGCAGCTCAGCAGCTCAGTGACCAGTGGAAGCTCATGCGTATGGGAGAAGATCCTCCCGTTGATATCTGGATGGCCAAT : AATCTACCAAAGGATGCGGCCATTGGTGTGGATACGTGGTGTGTATCAGTAGATACTGCACAGAAATGGGAGTGTGCTTTTGCTAAGAAACAACAAAAGTTGGTACAAACAACTAGAAACTTGGTTGATGATGTTTGGAAAAATCGGCTACCTGCCCAAGCAAATCCTGTAATTGTGCATCCGTTGCAATTTGCTGGTCAGTCTGTTGCAGAGAAGTTGAAAGAATTGAGGAAAAAGCTTGTAATGGGGAAAGCTTGTGCTATTATTATAACAGCGCTTGATGAA : GTTGCATGGTTATATAATGTCCGTGGCAGTGACGTATCATATTGCCCAGTTGTTCATGCATTTGCGATTGTGACTATAGATTCAGCCTTCTTCTACGTGGATAAGCAAAAATTGTCTCCTGAG : GCAAACTCTTACATGGAAGAAAATGGAATTATGGTGCGGGATTATGGTGATGTTAGCTCAGATGTGGTCCTCCTTGCATCTGATCAACTCACTTCTTGCTCCTCAACTAAGGGGTCTAAAGGGAACCCAAAGATTGATGTTAGAAATGCCACTTATGTAGGAAATAGTGATAGTCATGCTGCTGAGTTTGTAAATGACCTCATTTGGGTTGATCCTGGAGCATGTTGCTTCGCTTTGTATTCTAAATTGAGTGCTGATAAAGTTCTCCTTCAGCAATCACCTTTGGCCCTTGCAAAAGCTCTGAAG : AACCCTGTTGAGATAGAAGGATTAAAGAAGGCCCATTTTCGGGATGGGGCAGCTGTTGTGCAATATCTTGTCTGGCTTGATAAGCAG : ATGCAGGAAATATATGGAGCATCTGGTTATTTCATGGAGGCTGAGAGTACCAAACAGAAGAAACAACT : GGGGACTAAAAGACTGACAGAAGTCTCTGTGAGTGATAAGCTGGAGGAGTTCCGTGCATCAAAGGAG : CATTTTAGAGGATTAAGTTTCCGAACTACCTCTTCTGTTGGCTCAAATGCAGCCATTATCCACTATAAACCTGAGGCAGAAACATGTGCTGAACTCGATCCAGATTGTATTTACCTATTCGATTCTGGAGCACAG : TATCTGGATGGAACAACTGATATTACACGGACTATTCATTTCGGAAAACCTTCTCCACATGAGAAATCTAGTTACACGGCG : GTTCTTAAAGGACATATATCTTTGGGAAACGCCAGGTTTCCTAACGGAACCAATG : GGCAAGCTCTTGACATTCTTGCTCGAATTCCTTTGTGGAAAGATGGTCTTGACTATAGGCATGGTACTGGACACGGGATCGGGTCTTACTTAAATGTACATGAAG : GACCTCATAATATTAGTTTCAGGCCATCTGCACGGGATGTGCCGCTACAAGTTTCAATGGCTGTAACAGATG : AACCTGGTTATTATGAAGACGGGAACTTTGGTATAAGAATAGAGAATGTTCTTATTGTCAAGGAGGGCCATACGAAGTTCAACTTCGGCAATAAGGGCTACTTATCATTTGAGCATATAACTTGG : GCACCATACCAGAGGAAACTAATTGACGTGAGCCTTCTGATTCCTGAAGAGATTGAATGGTTAAATGAATACCATGCAAAATGTAGGGAAATTCTTACTCCTTACCTGAATACATCTGAGATGGAATGGCTGAAGAAGGCTACCGAACCCATTGCAGCTTGACATGCCTCATTTGTTAGGGGATTGGAGTTGAGGTTAATCAAAGGCTACTGATCCTTTTCCAGCTTAAGCCCTTCATCATATGTAGTTAAATCATAAAGATGCGACAAGTCTATGCTGCGTTTCGACGGAGTTAATACCGTAACTCATTTTTGCGGGCTCGCTTGCTTTATTCTTCTCCTTCCCCTCACTATACAGCTCCCATTATCTTTGAACTCTTTCATTAATTGGTAACAACTACAACACTCTGAAATAAAATCTCCAAACAACGGC</gDNA_template>
            <first_frame> V  P  W  P  W  T  R  D  E  N  H  K  S  N  S  N  L  *  S  K  E  T  M  A  D  T  L  A  A  L  R  S  L  M  S  S  H  S  P  S  L  H  A  L  I  I  P  S  E  D  Y  H  Q  :  S  E  Y  V  S  A  R  D  K  R  R  A  F  V  S  G  F  T  G  S  A   : G  L  A  L  I  T  M  D  E  A  L  L  W  T  D  G  R  Y  F  L  Q  A  A  Q  Q  L  S  D  Q  W  K  L  M  R  M  G  E  D  P  P  V  D  I  W  M  A  N  :  N  L  P  K  D  A  A  I  G  V  D  T  W  C  V  S  V  D  T  A  Q  K  W  E  C  A  F  A  K  K  Q  Q  K  L  V  Q  T  T  R  N  L  V  D  D  V  W  K  N  R  L  P  A  Q  A  N  P  V  I  V  H  P  L  Q  F  A  G  Q  S  V  A  E  K  L  K  E  L  R  K  K  L  V  M  G  K  A  C  A  I  I  I  T  A  L  D  E  :  V  A  W  L  Y  N  V  R  G  S  D  V  S  Y  C  P  V  V  H  A  F  A  I  V  T  I  D  S  A  F  F  Y  V  D  K  Q  K  L  S  P  E  :  A  N  S  Y  M  E  E  N  G  I  M  V  R  D  Y  G  D  V  S  S  D  V  V  L  L  A  S  D  Q  L  T  S  C  S  S  T  K  G  S  K  G  N  P  K  I  D  V  R  N  A  T  Y  V  G  N  S  D  S  H  A  A  E  F  V  N  D  L  I  W  V  D  P  G  A  C  C  F  A  L  Y  S  K  L  S  A  D  K  V  L  L  Q  Q  S  P  L  A  L  A  K  A  L  K  :  N  P  V  E  I  E  G  L  K  K  A  H  F  R  D  G  A  A  V  V  Q  Y  L  V  W  L  D  K  Q  :  M  Q  E  I  Y  G  A  S  G  Y  F  M  E  A  E  S  T  K  Q  K  K  Q  L :   G  T  K  R  L  T  E  V  S  V  S  D  K  L  E  E  F  R  A  S  K  E  :  H  F  R  G  L  S  F  R  T  T  S  S  V  G  S  N  A  A  I  I  H  Y  K  P  E  A  E  T  C  A  E  L  D  P  D  C  I  Y  L  F  D  S  G  A  Q  :  Y  L  D  G  T  T  D  I  T  R  T  I  H  F  G  K  P  S  P  H  E  K  S  S  Y  T  A  :  V  L  K  G  H  I  S  L  G  N  A  R  F  P  N  G  T  N   : G  Q  A  L  D  I  L  A  R  I  P  L  W  K  D  G  L  D  Y  R  H  G  T  G  H  G  I  G  S  Y  L  N  V  H  E   : G  P  H  N  I  S  F  R  P  S  A  R  D  V  P  L  Q  V  S  M  A  V  T  D   : E  P  G  Y  Y  E  D  G  N  F  G  I  R  I  E  N  V  L  I  V  K  E  G  H  T  K  F  N  F  G  N  K  G  Y  L  S  F  E  H  I  T  W  :  A  P  Y  Q  R  K  L  I  D  V  S  L  L  I  P  E  E  I  E  W  L  N  E  Y  H  A  K  C  R  E  I  L  T  P  Y  L  N  T  S  E  M  E  W  L  K  K  A  T  E  P  I  A  A  *  H  A  S  F  V  R  G  L  E  L  R  L  I  K  G  Y  *  S  F  S  S  L  S  P  S  S  Y  V  V  K  S  *  R  C  D  K  S  M  L  R  F  D  G  V  N  T  V  T  H  F  C  G  L  A  C  F  I  L  L  L  P  L  T  I  Q  L  P  L  S  L  N  S  F  I  N  W  *  Q  L  Q  H  S  E  I  K  S  P  N  N  G </first_frame>
            <second_frame>  C  H  G  H  G  L  E  M  K  T  T  S  Q  T  P  I  S  N  R  K  R  R  W  R  I  H  S  L  L  L  G  L  *  C  P  L  T  L  L  L  F  M  L  *  L  F  L  P  K  I  I  I  R :   A  N  M  Y  R  H  G  T  K  D  A  H  L  F  L  D  S  P  E  V  L  :  V  W  R  L  *  P  W  M  K  H  F  Y  G  P  M  A  G  I  S  Y  K  Q  L  S  S  S  V  T  S  G  S  S  C  V  W  E  K  I  L  P  L  I  S  G  W  P  I :   I  Y  Q  R  M  R  P  L  V  W  I  R  G  V  Y  Q  *  I  L  H  R  N  G  S  V  L  L  L  R  N  N  K  S  W  Y  K  Q  L  E  T  W  L  M  M  F  G  K  I  G  Y  L  P  K  Q  I  L  *  L  C  I  R  C  N  L  L  V  S  L  L  Q  R  S  *  K  N  *  G  K  S  L  *  W  G  K  L  V  L  L  L  *  Q  R  L  M  K :   L  H  G  Y  I  M  S  V  A  V  T  Y  H  I  A  Q  L  F  M  H  L  R  L  *  L  *  I  Q  P  S  S  T  W  I  S  K  N  C  L  L  R :   Q  T  L  T  W  K  K  M  E  L  W  C  G  I  M  V  M  L  A  Q  M  W  S  S  L  H  L  I  N  S  L  L  A  P  Q  L  R  G  L  K  G  T  Q  R  L  M  L  E  M  P  L  M  *  E  I  V  I  V  M  L  L  S  L  *  M  T  S  F  G  L  I  L  E  H  V  A  S  L  C  I  L  N  *  V  L  I  K  F  S  F  S  N  H  L  W  P  L  Q  K  L  *  R :   T  L  L  R  *  K  D  *  R  R  P  I  F  G  M  G  Q  L  L  C  N  I  L  S  G  L  I  S  R :   C  R  K  Y  M  E  H  L  V  I  S  W  R  L  R  V  P  N  R  R  N  N   : W  G  L  K  D  *  Q  K  S  L  *  V  I  S  W  R  S  S  V  H  Q  R  S :   I  L  E  D  *  V  S  E  L  P  L  L  L  A  Q  M  Q  P  L  S  T  I  N  L  R  Q  K  H  V  L  N  S  I  Q  I  V  F  T  Y  S  I  L  E  H  S :   I  W  M  E  Q  L  I  L  H  G  L  F  I  S  E  N  L  L  H  M  R  N  L  V  T  R  R :   F  L  K  D  I  Y  L  W  E  T  P  G  F  L  T  E  P  M  :  G  K  L  L  T  F  L  L  E  F  L  C  G  K  M  V  L  T  I  G  M  V  L  D  T  G  S  G  L  T  *  M  Y  M  K  :  D  L  I  I  L  V  S  G  H  L  H  G  M  C  R  Y  K  F  Q  W  L  *  Q  M  :  N  L  V  I  M  K  T  G  T  L  V  *  E  *  R  M  F  L  L  S  R  R  A  I  R  S  S  T  S  A  I  R  A  T  Y  H  L  S  I  *  L  G :   H  H  T  R  G  N  *  L  T  *  A  F  *  F  L  K  R  L  N  G  *  M  N  T  M  Q  N  V  G  K  F  L  L  L  T  *  I  H  L  R  W  N  G  *  R  R  L  P  N  P  L  Q  L  D  M  P  H  L  L  G  D  W  S  *  G  *  S  K  A  T  D  P  F  P  A  *  A  L  H  H  M  *  L  N  H  K  D  A  T  S  L  C  C  V  S  T  E  L  I  P  *  L  I  F  A  G  S  L  A  L  F  F  S  F  P  S  L  Y  S  S  H  Y  L  *  T  L  S  L  I  G  N  N  Y  N  T  L  K  *  N  L  Q  T  T   </second_frame>
            <third_frame>   A  M  A  M  D  *  R  *  K  P  Q  V  K  L  Q  S  L  I  E  R  D  D  G  G  Y  T  R  C  S  *  V  F  N  V  L  S  L  S  F  S  S  C  S  D  Y  S  F  R  R  L  S  S   : E  R  I  C  I  G  T  G  Q  K  T  R  I  C  F  W  I  H  R  K  C  W :   F  G  A  Y  N  H  G  *  S  T  F  M  D  R  W  Q  V  F  L  T  S  S  S  A  A  Q  *  P  V  E  A  H  A  Y  G  R  R  S  S  R  *  Y  L  D  G  Q   : *  S  T  K  G  C  G  H  W  C  G  Y  V  V  C  I  S  R  Y  C  T  E  M  G  V  C  F  C  *  E  T  T  K  V  G  T  N  N  *  K  L  G  *  *  C  L  E  K  S  A  T  C  P  S  K  S  C  N  C  A  S  V  A  I  C  W  S  V  C  C  R  E  V  E  R  I  E  E  K  A  C  N  G  E  S  L  C  Y  Y  Y  N  S  A  *  *   : S  C  M  V  I  *  C  P  W  Q  *  R  I  I  L  P  S  C  S  C  I  C  D  C  D  Y  R  F  S  L  L  L  R  G  *  A  K  I  V  S  *   : G  K  L  L  H  G  R  K  W  N  Y  G  A  G  L  W  *  C  *  L  R  C  G  P  P  C  I  *  S  T  H  F  L  L  L  N  *  G  V  *  R  E  P  K  D  *  C  *  K  C  H  L  C  R  K  *  *  *  S  C  C  *  V  C  K  *  P  H  L  G  *  S  W  S  M  L  L  R  F  V  F  *  I  E  C  *  *  S  S  P  S  A  I  T  F  G  P  C  K  S  S  E   : E  P  C  *  D  R  R  I  K  E  G  P  F  S  G  W  G  S  C  C  A  I  S  C  L  A  *  *  A   : D  A  G  N  I  W  S  I  W  L  F  H  G  G  *  E  Y  Q  T  E  E  T  T  :  G  D  *  K  T  D  R  S  L  C  E  *  *  A  G  G  V  P  C  I  K  G   : A  F  *  R  I  K  F  P  N  Y  L  F  C  W  L  K  C  S  H  Y  P  L  *  T  *  G  R  N  M  C  *  T  R  S  R  L  Y  L  P  I  R  F  W  S  T   : V  S  G  W  N  N  *  Y  Y  T  D  Y  S  F  R  K  T  F  S  T  *  E  I  *  L  H  G   : G  S  *  R  T  Y  I  F  G  K  R  Q  V  S  *  R  N  Q  W :   A  S  S  *  H  S  C  S  N  S  F  V  E  R  W  S  *  L  *  A  W  Y  W  T  R  D  R  V  L  L  K  C  T  *  R :   T  S  *  Y  *  F  Q  A  I  C  T  G  C  A  A  T  S  F  N  G  C  N  R  * :   T  W  L  L  *  R  R  E  L  W  Y  K  N  R  E  C  S  Y  C  Q  G  G  P  Y  E  V  Q  L  R  Q  *  G  L  L  I  I  *  A  Y  N  L   : G  T  I  P  E  E  T  N  *  R  E  P  S  D  S  *  R  D  *  M  V  K  *  I  P  C  K  M  *  G  N  S  Y  S  L  P  E  Y  I  *  D  G  M  A  E  E  G  Y  R  T  H  C  S  L  T  C  L  I  C  *  G  I  G  V  E  V  N  Q  R  L  L  I  L  F  Q  L  K  P  F  I  I  C  S  *  I  I  K  M  R  Q  V  Y  A  A  F  R  R  S  *  Y  R  N  S  F  L  R  A  R  L  L  Y  S  S  P  S  P  H  Y  T  A  P  I  I  F  E  L  F  H  *  L  V  T  T  T  T  L  *  N  K  I  S  K  Q  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47937" stop="48041"/>
                    <exon start="48119" stop="48182"/>
                    <exon start="48275" stop="48414"/>
                    <exon start="49553" stop="49837"/>
                    <exon start="49939" stop="50061"/>
                    <exon start="50161" stop="50466"/>
                    <exon start="51723" stop="51809"/>
                    <exon start="52254" stop="52321"/>
                    <exon start="52776" stop="52842"/>
                    <exon start="53462" stop="53596"/>
                    <exon start="53694" stop="53774"/>
                    <exon start="54445" stop="54499"/>
                    <exon start="54694" stop="54798"/>
                    <exon start="54873" stop="54944"/>
                    <exon start="55366" stop="55490"/>
                    <exon start="55730" stop="55891"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1977</number_coding_nucleotides>
                  <number_encoded_amino_acids>659</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKETMADTLAALRSLMSSHSPSLHALIIPSEDYHQSEYVSARDKRRAFVSGFTGSAGLALITMDEALLWTDGRYFLQAAQQLSDQWKLMRMGEDPPVDIWMANNLPKDAAIGVDTWCVSVDTAQKWECAFAKKQQKLVQTTRNLVDDVWKNRLPAQANPVIVHPLQFAGQSVAEKLKELRKKLVMGKACAIIITALDEVAWLYNVRGSDVSYCPVVHAFAIVTIDSAFFYVDKQKLSPEANSYMEENGIMVRDYGDVSSDVVLLASDQLTSCSSTKGSKGNPKIDVRNATYVGNSDSHAAEFVNDLIWVDPGACCFALYSKLSADKVLLQQSPLALAKALKNPVEIEGLKKAHFRDGAAVVQYLVWLDKQMQEIYGASGYFMEAESTKQKKQLGTKRLTEVSVSDKLEEFRASKEHFRGLSFRTTSSVGSNAAIIHYKPEAETCAELDPDCIYLFDSGAQYLDGTTDITRTIHFGKPSPHEKSSYTAVLKGHISLGNARFPNGTNGQALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHNISFRPSARDVPLQVSMAVTDEPGYYEDGNFGIRIENVLIVKEGHTKFNFGNKGYLSFEHITWAPYQRKLIDVSLLIPEEIEWLNEYHAKCREILTPYLNTSEMEWLKKATEPIAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="59396" PGL_stop="59941"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59396" e_stop="59941"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="59396" e_stop="59941" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59396" stop="59941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAAATTTATCATCAGATGGATGATTTAGGCACCCCCAGATCAGCTATTTCCTTCAATGTGCTTTTATCAGCTTGCGTGCGCTCAAAACTATATGATCGTGTCCCCCAGCTGTTTGATGAAATTCCAGTGAAGTATGGATTTTTACCTGATAAAGTGTCGTACGGTATACTGATTAGGTCATATTGTGAAACGGGGTCGCCGGAAATGGCAATGGAAATACTCAAGGTGATGGAGGAGAAAAGTGTGGAGATTACAACGGTTACTTTCACTACTATACTTCATTCATTCTACAAGAAAGGGAAGAGTGATGAGGCGGAGAAGGTATGGAACGAGATGGTGAACAGAGGGTGTGGTCCAGATGTTGGTGCATACAATGTGAAGATTATGAACATTCAGGGGGGTGATCTGGAGGGCGTGAAAGCTTTAATTGAGGAAATGAACGATGCTGGATTGAAACCTGATACGATTAGCTACAATTACTTGATGACTTGTTATTGTAAGAATGAATTGATGGATGAGGCACAGATGGTTTATGATGATCTGG</gDNA_template>
            <first_frame> S  K  F  I  I  R  W  M  I  *  A  P  P  D  Q  L  F  P  S  M  C  F  Y  Q  L  A  C  A  Q  N  Y  M  I  V  S  P  S  C  L  M  K  F  Q  *  S  M  D  F  Y  L  I  K  C  R  T  V  Y  *  L  G  H  I  V  K  R  G  R  R  K  W  Q  W  K  Y  S  R  *  W  R  R  K  V  W  R  L  Q  R  L  L  S  L  L  Y  F  I  H  S  T  R  K  G  R  V  M  R  R  R  R  Y  G  T  R  W  *  T  E  G  V  V  Q  M  L  V  H  T  M  *  R  L  *  T  F  R  G  V  I  W  R  A  *  K  L  *  L  R  K  *  T  M  L  D  *  N  L  I  R  L  A  T  I  T  *  *  L  V  I  V  R  M  N  *  W  M  R  H  R  W  F  M  M  I  W </first_frame>
            <second_frame>  Q  N  L  S  S  D  G  *  F  R  H  P  Q  I  S  Y  F  L  Q  C  A  F  I  S  L  R  A  L  K  T  I  *  S  C  P  P  A  V  *  *  N  S  S  E  V  W  I  F  T  *  *  S  V  V  R  Y  T  D  *  V  I  L  *  N  G  V  A  G  N  G  N  G  N  T  Q  G  D  G  G  E  K  C  G  D  Y  N  G  Y  F  H  Y  Y  T  S  F  I  L  Q  E  R  E  E  *  *  G  G  E  G  M  E  R  D  G  E  Q  R  V  W  S  R  C  W  C  I  Q  C  E  D  Y  E  H  S  G  G  *  S  G  G  R  E  S  F  N  *  G  N  E  R  C  W  I  E  T  *  Y  D  *  L  Q  L  L  D  D  L  L  L  *  E  *  I  D  G  *  G  T  D  G  L  *  *  S   </second_frame>
            <third_frame>   K  I  Y  H  Q  M  D  D  L  G  T  P  R  S  A  I  S  F  N  V  L  L  S  A  C  V  R  S  K  L  Y  D  R  V  P  Q  L  F  D  E  I  P  V  K  Y  G  F  L  P  D  K  V  S  Y  G  I  L  I  R  S  Y  C  E  T  G  S  P  E  M  A  M  E  I  L  K  V  M  E  E  K  S  V  E  I  T  T  V  T  F  T  T  I  L  H  S  F  Y  K  K  G  K  S  D  E  A  E  K  V  W  N  E  M  V  N  R  G  C  G  P  D  V  G  A  Y  N  V  K  I  M  N  I  Q  G  G  D  L  E  G  V  K  A  L  I  E  E  M  N  D  A  G  L  K  P  D  T  I  S  Y  N  Y  L  M  T  C  Y  C  K  N  E  L  M  D  E  A  Q  M  V  Y  D  D  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59398" stop="59940"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIYHQMDDLGTPRSAISFNVLLSACVRSKLYDRVPQLFDEIPVKYGFLPDKVSYGILIRSYCETGSPEMAMEILKVMEEKSVEITTVTFTTILHSFYKKGKSDEAEKVWNEMVNRGCGPDVGAYNVKIMNIQGGDLEGVKALIEEMNDAGLKPDTISYNYLMTCYCKNELMDEAQMVYDDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="65622" PGL_stop="65999"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65622" e_stop="65999"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="65622" e_stop="65999" e_length="378"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65622" stop="65999"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570508" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGTGGTAAATTCTATTCGAAACATGCATACTGTAAATTATAGTAGCACATAATAACAACATAACATAGACAACTTTAGGGTATATATAGCCCTAATCACTCATTATCTTACCCTTTTTAGATAGTTTCCTCACACCTTAATGTTCTTGCAACCATGGATAGATCTCTTCTCAATGTCTCTGAGGACTTGACACATTGAATCATGAGAGGAGCCTCCTATACTTAGTGCTTTCTCTGCACTCATCTTCAGTTTCTTCACATTTTCCTTCAATTCATTTCCTTCTTTATATTGCATTACCATTCTCACCAATTGCTCTATTTCTTCCCTTTCCACCACTTCCTTTGTTGGCAATACCTTTGGCCCAACAGCCACTCTA</gDNA_template>
            <first_frame> I  V  V  N  S  I  R  N  M  H  T  V  N  Y  S  S  T  *  *  Q  H  N  I  D  N  F  R  V  Y  I  A  L  I  T  H  Y  L  T  L  F  R  *  F  P  H  T  L  M  F  L  Q  P  W  I  D  L  F  S  M  S  L  R  T  *  H  I  E  S  *  E  E  P  P  I  L  S  A  F  S  A  L  I  F  S  F  F  T  F  S  F  N  S  F  P  S  L  Y  C  I  T  I  L  T  N  C  S  I  S  S  L  S  T  T  S  F  V  G  N  T  F  G  P  T  A  T  L </first_frame>
            <second_frame>  *  W  *  I  L  F  E  T  C  I  L  *  I  I  V  A  H  N  N  N  I  T  *  T  T  L  G  Y  I  *  P  *  S  L  I  I  L  P  F  L  D  S  F  L  T  P  *  C  S  C  N  H  G  *  I  S  S  Q  C  L  *  G  L  D  T  L  N  H  E  R  S  L  L  Y  L  V  L  S  L  H  S  S  S  V  S  S  H  F  P  S  I  H  F  L  L  Y  I  A  L  P  F  S  P  I  A  L  F  L  P  F  P  P  L  P  L  L  A  I  P  L  A  Q  Q  P  L   </second_frame>
            <third_frame>   S  G  K  F  Y  S  K  H  A  Y  C  K  L  *  *  H  I  I  T  T  *  H  R  Q  L  *  G  I  Y  S  P  N  H  S  L  S  Y  P  F  *  I  V  S  S  H  L  N  V  L  A  T  M  D  R  S  L  L  N  V  S  E  D  L  T  H  *  I  M  R  G  A  S  Y  T  *  C  F  L  C  T  H  L  Q  F  L  H  I  F  L  Q  F  I  S  F  F  I  L  H  Y  H  S  H  Q  L  L  Y  F  F  P  F  H  H  F  L  C  W  Q  Y  L  W  P  N  S  H  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65806" stop="65997"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLDTLNHERSLLYLVLSLHSSSVSSHFPSIHFLLYIALPFSPIALFLPFPPLPLLAIPLAQQPL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="72479" PGL_stop="74768"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72479" e_stop="72827"/>
            <exon e_start="74041" e_stop="74664"/>
            <exon e_start="74763" e_stop="74768"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.716" e_score="0.991"/>
          <exon-intron don_prob="0.998" acc_prob="0.981" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="72479" e_stop="72827" e_length="349"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.716">
            <gDNA_intron_boundary i_start="72828" i_stop="74040" i_length="1213"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="74041" e_stop="74664" e_length="624"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.981">
            <gDNA_intron_boundary i_start="74665" i_stop="74762" i_length="98"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74763" e_stop="74768" e_length="6"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72479" stop="72827"/>
              <exon start="74041" stop="74664"/>
              <exon start="74763" stop="74768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCACCAAAACATCCCTCCATCTTTCTTATTATCCAGATTTTGTACTCATAATAACATAAATTGTACTGAATCTTATCACATATTCTTTACGTTTGATGATTGTACGTATATTGTATGGTAAGTAGATCTCAAATCTTCATCTGGGGTTGTCTAAAAATGGAATCTTGCAGCAAATAAACAGAGCCACGTTGAATGAATGGCGAGTTAGTGCCCCAGAAGGAGAAGGGCCAGCAAAAGGTTGACCTTTATTCCTTTGGGATTGATGGGGTTAAGCGCTAGAGCTTCAAGATTACCTTCTTCTGTTTTTCGACCTAAATCTCTGCTTCCCAGCCACCTTTCCACCATGAG : AACAAGGACAATTTTTGGGATCTCTATTTCCCTAATCATCATCAACATGGCCGCTATAATGGAGCGCGCTGATGAGAATCTCCTTCCAGCTGTTTATAAAGAAGTCAGTGAAGCTTTTACAGCAGGACCATCTGATCTTGGGTTTCTCACATTCATTAGGAACTTTGTGCAGGGAATTGCTTCTCCAGTGGCAGGTATTTTAGTTTTAAATTATGACCGACCCACGGTTCTTGCAATTGGTATCCTCTTCTGGGCCCTATCAACCGGTGCAGTGGGTGCGAGCAAGTATTTTCTGCAGGTTGGCTTCTGGAGAGCTGTAAATGGCTTCGGTCTGGCAATTGTGATACCTGCTTTGCAGTCCTTCATAGCTGATAGCTACAAGGATGAAGTCAGAGGGACGGGATTTGGGTTTCTTAATCTAATTGGTACTGTGGGTGGGATAGGAGGTGGAGCTATAGCTACAGTTATGGCTGGTCATGAATACTGGGGCATACCAGGATGGCGCTTTTCCTTCATCGTGATGGCAACTTTGAGTTGTTTCATAGGATTTCTTGTCTTCTCTTTTGTCGTTGACCCAAGGAAGAAAAGCAGTGGCCAGCATGATATTTCAAAACAGTCTGACAG : GGATGA</gDNA_template>
            <first_frame> P  T  K  T  S  L  H  L  S  Y  Y  P  D  F  V  L  I  I  T  *  I  V  L  N  L  I  T  Y  S  L  R  L  M  I  V  R  I  L  Y  G  K  *  I  S  N  L  H  L  G  L  S  K  N  G  I  L  Q  Q  I  N  R  A  T  L  N  E  W  R  V  S  A  P  E  G  E  G  P  A  K  G  *  P  L  F  L  W  D  *  W  G  *  A  L  E  L  Q  D  Y  L  L  L  F  F  D  L  N  L  C  F  P  A  T  F  P  P  *   : E  Q  G  Q  F  L  G  S  L  F  P  *  S  S  S  T  W  P  L  *  W  S  A  L  M  R  I  S  F  Q  L  F  I  K  K  S  V  K  L  L  Q  Q  D  H  L  I  L  G  F  S  H  S  L  G  T  L  C  R  E  L  L  L  Q  W  Q  V  F  *  F  *  I  M  T  D  P  R  F  L  Q  L  V  S  S  S  G  P  Y  Q  P  V  Q  W  V  R  A  S  I  F  C  R  L  A  S  G  E  L  *  M  A  S  V  W  Q  L  *  Y  L  L  C  S  P  S  *  L  I  A  T  R  M  K  S  E  G  R  D  L  G  F  L  I  *  L  V  L  W  V  G  *  E  V  E  L  *  L  Q  L  W  L  V  M  N  T  G  A  Y  Q  D  G  A  F  P  S  S  *  W  Q  L  *  V  V  S  *  D  F  L  S  S  L  L  S  L  T  Q  G  R  K  A  V  A  S  M  I  F  Q  N  S  L  T   : G  M  </first_frame>
            <second_frame>  P  P  K  H  P  S  I  F  L  I  I  Q  I  L  Y  S  *  *  H  K  L  Y  *  I  L  S  H  I  L  Y  V  *  *  L  Y  V  Y  C  M  V  S  R  S  Q  I  F  I  W  G  C  L  K  M  E  S  C  S  K  *  T  E  P  R  *  M  N  G  E  L  V  P  Q  K  E  K  G  Q  Q  K  V  D  L  Y  S  F  G  I  D  G  V  K  R  *  S  F  K  I  T  F  F  C  F  S  T  *  I  S  A  S  Q  P  P  F  H  H  E  :  N  K  D  N  F  W  D  L  Y  F  P  N  H  H  Q  H  G  R  Y  N  G  A  R  *  *  E  S  P  S  S  C  L  *  R  S  Q  *  S  F  Y  S  R  T  I  *  S  W  V  S  H  I  H  *  E  L  C  A  G  N  C  F  S  S  G  R  Y  F  S  F  K  L  *  P  T  H  G  S  C  N  W  Y  P  L  L  G  P  I  N  R  C  S  G  C  E  Q  V  F  S  A  G  W  L  L  E  S  C  K  W  L  R  S  G  N  C  D  T  C  F  A  V  L  H  S  *  *  L  Q  G  *  S  Q  R  D  G  I  W  V  S  *  S  N  W  Y  C  G  W  D  R  R  W  S  Y  S  Y  S  Y  G  W  S  *  I  L  G  H  T  R  M  A  L  F  L  H  R  D  G  N  F  E  L  F  H  R  I  S  C  L  L  F  C  R  *  P  K  E  E  K  Q  W  P  A  *  Y  F  K  T  V  *  Q  :  G  * </second_frame>
            <third_frame>   H  Q  N  I  P  P  S  F  L  L  S  R  F  C  T  H  N  N  I  N  C  T  E  S  Y  H  I  F  F  T  F  D  D  C  T  Y  I  V  W  *  V  D  L  K  S  S  S  G  V  V  *  K  W  N  L  A  A  N  K  Q  S  H  V  E  *  M  A  S  *  C  P  R  R  R  R  A  S  K  R  L  T  F  I  P  L  G  L  M  G  L  S  A  R  A  S  R  L  P  S  S  V  F  R  P  K  S  L  L  P  S  H  L  S  T  M  R :   T  R  T  I  F  G  I  S  I  S  L  I  I  I  N  M  A  A  I  M  E  R  A  D  E  N  L  L  P  A  V  Y  K  E  V  S  E  A  F  T  A  G  P  S  D  L  G  F  L  T  F  I  R  N  F  V  Q  G  I  A  S  P  V  A  G  I  L  V  L  N  Y  D  R  P  T  V  L  A  I  G  I  L  F  W  A  L  S  T  G  A  V  G  A  S  K  Y  F  L  Q  V  G  F  W  R  A  V  N  G  F  G  L  A  I  V  I  P  A  L  Q  S  F  I  A  D  S  Y  K  D  E  V  R  G  T  G  F  G  F  L  N  L  I  G  T  V  G  G  I  G  G  G  A  I  A  T  V  M  A  G  H  E  Y  W  G  I  P  G  W  R  F  S  F  I  V  M  A  T  L  S  C  F  I  G  F  L  V  F  S  F  V  V  D  P  R  K  K  S  S  G  Q  H  D  I  S  K  Q  S  D  R :   D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72688" stop="72827"/>
                    <exon start="74041" stop="74664"/>
                    <exon start="74763" stop="74766"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPRRRRASKRLTFIPLGLMGLSARASRLPSSVFRPKSLLPSHLSTMRTRTIFGISISLIIINMAAIMERADENLLPAVYKEVSEAFTAGPSDLGFLTFIRNFVQGIASPVAGILVLNYDRPTVLAIGILFWALSTGAVGASKYFLQVGFWRAVNGFGLAIVIPALQSFIADSYKDEVRGTGFGFLNLIGTVGGIGGGAIATVMAGHEYWGIPGWRFSFIVMATLSCFIGFLVFSFVVDPRKKSSGQHDISKQSDRD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="83219" PGL_stop="76137"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83219" e_stop="83054"/>
            <exon e_start="82841" e_stop="82769"/>
            <exon e_start="82669" e_stop="80334"/>
            <exon e_start="80244" e_stop="80201"/>
            <exon e_start="80123" e_stop="79857"/>
            <exon e_start="79781" e_stop="79243"/>
            <exon e_start="78460" e_stop="78379"/>
            <exon e_start="78026" e_stop="77935"/>
            <exon e_start="77356" e_stop="77283"/>
            <exon e_start="76854" e_stop="76598"/>
            <exon e_start="76506" e_stop="76137"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.940" acc_prob="0.506" e_score="0.994"/>
          <exon-intron don_prob="0.936" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="0.843" e_score="1.000"/>
          <exon-intron don_prob="0.649" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.826" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.286" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.282" e_score="1.000"/>
          <exon-intron don_prob="0.793" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.920" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="83219" e_stop="83054" e_length="166"/>
          </exon>
          <intron i_serial="1" don_prob="0.940" acc_prob="0.506">
            <gDNA_intron_boundary i_start="83053" i_stop="82842" i_length="212"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82841" e_stop="82769" e_length="73"/>
          </exon>
          <intron i_serial="2" don_prob="0.936" acc_prob="0.985">
            <gDNA_intron_boundary i_start="82768" i_stop="82670" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="82669" e_stop="80334" e_length="2336"/>
          </exon>
          <intron i_serial="3" don_prob="0.883" acc_prob="0.843">
            <gDNA_intron_boundary i_start="80333" i_stop="80245" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="80244" e_stop="80201" e_length="44"/>
          </exon>
          <intron i_serial="4" don_prob="0.649" acc_prob="0.987">
            <gDNA_intron_boundary i_start="80200" i_stop="80124" i_length="77"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="80123" e_stop="79857" e_length="267"/>
          </exon>
          <intron i_serial="5" don_prob="0.826" acc_prob="0.989">
            <gDNA_intron_boundary i_start="79856" i_stop="79782" i_length="75"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="79781" e_stop="79243" e_length="539"/>
          </exon>
          <intron i_serial="6" don_prob="0.286" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79242" i_stop="78461" i_length="782"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="78460" e_stop="78379" e_length="82"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.282">
            <gDNA_intron_boundary i_start="78378" i_stop="78027" i_length="352"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="78026" e_stop="77935" e_length="92"/>
          </exon>
          <intron i_serial="8" don_prob="0.793" acc_prob="0.000">
            <gDNA_intron_boundary i_start="77934" i_stop="77357" i_length="578"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="77356" e_stop="77283" e_length="74"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="77282" i_stop="76855" i_length="428"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="76854" e_stop="76598" e_length="257"/>
          </exon>
          <intron i_serial="10" don_prob="0.920" acc_prob="0.990">
            <gDNA_intron_boundary i_start="76597" i_stop="76507" i_length="91"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="76506" e_stop="76137" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83219" stop="83054"/>
              <exon start="82841" stop="82769"/>
              <exon start="82669" stop="80334"/>
              <exon start="80244" stop="80201"/>
              <exon start="80123" stop="79857"/>
              <exon start="79781" stop="79243"/>
              <exon start="78460" stop="78379"/>
              <exon start="78026" stop="77935"/>
              <exon start="77356" stop="77283"/>
              <exon start="76854" stop="76598"/>
              <exon start="76506" stop="76137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579315" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATTACAGAAGACCGGGGAACTTCATACGCTACTCTGCTGAAGTTGTACGCTACCGGCCCTTAACACTCCGGTGACGATGTACGATCAAAACTATTCAATACCAGCGCTTAACTTTCCAGTGACGGCGATAATACCTACTGCCAAGATTCGCTACTCTTATCTTG : AAGCTATCTGGTCGGAGCTTCCACGGCAATCATCACATCAATGTGATCAATTTTTCACCCCAGGTGATGTAAG : GCCAAGTGTGAAAATGAATCTTGTTAACAGCTAAAAGAGCAAATTACAAGGTCAAGGGAAGTGCACAAGTACATGTGATGGGGAGTCAAAAGAAGGTAAACCATTCCTGCCCCTGTTCCTGACCTGAATAAGAGCTGAGTCTTTTCAGTTATCCTACTTTTCAAGATAATCTTAGAATGCATTCGTATTAATCATGATAGTATTAGAGATTACAATGCCTCTTTTTGTCTTGGTAAAATGGAGGAGCTGAATGACTTCTTCTGCTTTTTCTTCTTCCTTAAAAAAATCAATCTGTTTTACCTTGATTACAAGCATCAATACATTTACGCGAGTCCCCATCCACCCTAGAGGAAAGCATAGCTCTTGGTTGCAAATAATTCTTAAGATTCTCTTCACCATGAGAATGCATGTGTCAGAATGTCCTTGGTTAATGAAGATTTTTCTGAATCTCCTGACGAATCTTGACCTCTGCAATGTCTTGCTCTGAGTTTTTCACCTGGAGAAGTTCTCAAAATAACCTTTGATATAAGACCCGGTTAACATCATCAGCTACTTCAAATTTAACTCTATATTCATCTTCAAGGCTATTTTGTTTTTTTCTGTAGTACTTTTTAAAACTTAATACGTACATCACTATTAATAGATGATCCATCATGAGGATGGTGGAGGTTTTGTCTTCCGTGGAATTTCAATAAAACTTGTTTTCTGTGGAGCCTGATTAAACAGTTGGTTAGCACGGCACCTCGGGTGGTGGGTCTATGAGATTTTGGAATGAAATTTCCATATCATGGTGTTTCTTCTCAGCTCATAAGGTTAACTGATGCATGCAGCCACAACGGATTTCAATGCTTTTGGTGAAATTAGACATGACCTTCCACTTATTTTTATTGCTCTTTGTTTTAACTCAAAATGGCAGTCAAACATGTTGTCTGTTGAGTTGTAAACCTGTTGCTTGTTTGGCACTTCAAGTGGGTCTGTGAGATTTTGGAGAAAGTTCCATTTCATGGTGTTCCTTCTCTGTCTCATAAGGCTAACTGATGCTTGAAGCCATGACAGGTTCCTATGCTTTTGAGTTGATTCATGTTTTGAAAACTTTAGTTTCTTTCCCACCCCTCATCGAACTCCCTTTTTTCGTGATATTACAAAGGTAATCCCTGTTTTTTTATTCTTATTACTCACTCTCTCTGTTTTATACACAATGAAGATTTGGAGGTTTTCATTTATTGATGTTCAATCAAACATGTTGCCTCTTTCCTGTCAAGCTAAAGAACTGTTGCTTGGCACGGCACTTCATTTGGGTTTATGAGATTTTGGGAGAAGTTTCATTTTTTGGTCTTTCTTTTCTGTTCCCTAGGCATACCTTGCAGCCATGCTGGGTTTCCAAGCTTTTGAGCTGATCGTTTTTGGCATTGCAAAGTTCAATTTTTTTTTTGTCACTAAATCACTGTTTTGGTGAAACTATACGACTTCCTACTTTTCTTGTTCTTATTACTCTCTCCGGTATAACTCAAAAATCAATTTAACATGTTCTGTCTTGAGCTGAATTTTTTGCTTGGCGTGGCACCTCAGGTGGGAATATGAGATTTAAGAGAAAGTTTCATTTCATGATGCATCTTCTCTGTCTCATAAGGCTAACTGATGCTTGCAGCGATGACAGATTTCTAACCTTGTGAGCTGATTCGTGTCTTGGCTTAAAGTTCGGTTTCCTTTCCCCCTTCAGCAAACCATCCTTTTCGTGAAATTACACATGACCTTCCTCTTTTCTTGTTCTTATTACTCTCTCTGCTCCTTTTTAAAAAACCATGACGATTTGTAGGTTCTCTTCCTTGGAAGTTCAATAAAAATTTGTATGATTTCACAAGGGTTGTTGAGAACTTGGTTTCAAACAGCTTTGATGCAGGTACCTCCACGGTGTACTAATTTACTCTTTCAAAGTTTCAATATTTCTTTATAATTTTACTATGTATGTAGAATTATTTTGATTAGTTATTGTAGCTGAAGTTGAGTTGGAACATACATATTGGTGCCTCGATACTTATAGCCCAGCTTATGGAGACAATAAATGTGTCTGCTTCTTTTGTCTTCTGTTATGCTTCCTTTTCATCGCCATTTTAACTGTGGTTTCATATGCTTTCTTTACACCTGTGACATCAAAAAATTTTGTATGACTAATTGTGAATTTTTAGCGATGCAAAATTGGTACTGCCATTCAGATGATATGCATGCCTTCCCAGCAAGCTTTGGCCTTACACAAGAGGCTCTGAGCCCTATTTCTGATGTTTCTTTGTAGGAATTGTTACCATGGGAGGCCAAATGGATATTGTAAGGTTTAGGAG : GACAACAAGTGTTTTGTACGTTGAATTGATGATTGGTACAAAAG : TAATTGTTCATGATATATTTTACGACTAACCAGTTCGAAGGAAGCAAATGCACTCCGAACACTTCTAGTTTCCTCAAAATCAAACAAGTAGAAAGTAATGATTTACATATTTCTACTTCTAAAGTTGTACTTTGATATGATTGATCTTTTGGTTTGCTTATATAATTTTGAAGTCCAAGTATAGGGTCTCGCATTCTCCGAAAGATCTCTACTAAGAATTTCTCTTGCGCATCGTTTTGTGTCCTGCAAAATTGTTGATATTGAAAG : TGAGGATGACCTGCTTTGCACACGTGCTTCTCCTTGTCCTTGCTGCTGTTGTCCAGTGGGTTTGGGATTCATCTGGGTTCCCTTAAAAATTGAATCCAAGCGCTGGTTCATTCAAGTTTTCAGGATGCCTCTCAGGTCCTGATGTTTACACAATGAGGGTATACATGCCCAAATTGATGGATAAAGAGATGTGATAAGTCATCTTTTCTACACGTTGTTTCCCTAACAACCACGGATTAATTTGCAGGTCCTTCAGTATTTCATTATCCACTTATTTTAGTATGTTGTCAAGGAAACAGAAACCTAATCTTTGGTTAATATTCACTATACTGGATGCTTGTTTTTTGTACGATGTCTTTGTTTTCCTTGACCTCCGTAATGCAAATATCAATTCAAGATTTGTTTCCAAAGGACCAATAAATAAATTACTTAACAACATAGCTATGAGTTTTGGCAGTGCATCTGACATTGAGAAGCAAAATAGATCTCAGATATATCCACTGTTTTTGGAGCCTTCAAAGACATTTGTGGAATTTAAG : GATATGTTAAGGATGTTCAAACGGTTTTCAACAACCTTGAAGGCCCCACTCTCACAGCTTAAAAAAAAGTTTAATTATTAAG : AAAGTTCTGCTCAATTTATTATTTTACTTCATCTTCTGAGGCTGTACTTTTTTTCTCACGGAATGGACTGGTGTTGATGGGAGAAAGATATG : GGGTTATCTTGTATTATTTCACAAGGGTTGTTGAGGAGTTGGTTTTCAGCAGCCCAGATGCTGGTGCCACCAAG : GTTCCATCAATATATCCACGTGAACCACCAAAAGTCAAGTGCAAGACCAAGGCACAACTGTTTTTCCTTCTCTTCCACTTGCATATATTCTGACATGAGCCAGAGAAGATGACTCTCATTAGCTTTCTGTGTGAGATGCAGGTATATCATCCTAATATCGATTTGGAGAGTAATATATACCTCAACATACTAAGAGAAGGTTGAAACCCGTTCTCAGTATCAACACAATTAGCCATGGATTGTATCTTCGTTTCACG : GAACCAAACCATGAGGATCCCCTTAATCTCGAGGCTGCTGCTGTTGAGAGATAATCCTGAGTTTAAATAAAATGTGAAAAGGGCTATGCATTGTGGAACTGTAGTGAATATAAGCTTCACGCAATGCATGTAACCTGTCCTCTGGTGCTGGTAATAGTGTTTCTGATTAGATGCTGTATCATTTTGAGGTGTGCTGGGTTGTATATGGTGTCCGCAAACTTGCAGTGCCATCTTATCTGAGTGTGTCATTTTAGCTTTAAGTTCTTTGACGTGTATCCATTGATGTATCTGTTATGCTGGCTGAACAGCATGTCATGAACATAAAGTAAACAAATGGAATGGTTATATATAGACGAAAGAGCATTGCCTA</gDNA_template>
            <first_frame> K  L  Q  K  T  G  E  L  H  T  L  L  C  *  S  C  T  L  P  A  L  N  T  P  V  T  M  Y  D  Q  N  Y  S  I  P  A  L  N  F  P  V  T  A  I  I  P  T  A  K  I  R  Y  S  Y  L   : E  A  I  W  S  E  L  P  R  Q  S  S  H  Q  C  D  Q  F  F  T  P  G  D  V  R :   P  S  V  K  M  N  L  V  N  S  *  K  S  K  L  Q  G  Q  G  K  C  T  S  T  C  D  G  E  S  K  E  G  K  P  F  L  P  L  F  L  T  *  I  R  A  E  S  F  Q  L  S  Y  F  S  R  *  S  *  N  A  F  V  L  I  M  I  V  L  E  I  T  M  P  L  F  V  L  V  K  W  R  S  *  M  T  S  S  A  F  S  S  S  L  K  K  S  I  C  F  T  L  I  T  S  I  N  T  F  T  R  V  P  I  H  P  R  G  K  H  S  S  W  L  Q  I  I  L  K  I  L  F  T  M  R  M  H  V  S  E  C  P  W  L  M  K  I  F  L  N  L  L  T  N  L  D  L  C  N  V  L  L  *  V  F  H  L  E  K  F  S  K  *  P  L  I  *  D  P  V  N  I  I  S  Y  F  K  F  N  S  I  F  I  F  K  A  I  L  F  F  S  V  V  L  F  K  T  *  Y  V  H  H  Y  *  *  M  I  H  H  E  D  G  G  G  F  V  F  R  G  I  S  I  K  L  V  F  C  G  A  *  L  N  S  W  L  A  R  H  L  G  W  W  V  Y  E  I  L  E  *  N  F  H  I  M  V  F  L  L  S  S  *  G  *  L  M  H  A  A  T  T  D  F  N  A  F  G  E  I  R  H  D  L  P  L  I  F  I  A  L  C  F  N  S  K  W  Q  S  N  M  L  S  V  E  L  *  T  C  C  L  F  G  T  S  S  G  S  V  R  F  W  R  K  F  H  F  M  V  F  L  L  C  L  I  R  L  T  D  A  *  S  H  D  R  F  L  C  F  *  V  D  S  C  F  E  N  F  S  F  F  P  T  P  H  R  T  P  F  F  R  D  I  T  K  V  I  P  V  F  L  F  L  L  L  T  L  S  V  L  Y  T  M  K  I  W  R  F  S  F  I  D  V  Q  S  N  M  L  P  L  S  C  Q  A  K  E  L  L  L  G  T  A  L  H  L  G  L  *  D  F  G  R  S  F  I  F  W  S  F  F  S  V  P  *  A  Y  L  A  A  M  L  G  F  Q  A  F  E  L  I  V  F  G  I  A  K  F  N  F  F  F  V  T  K  S  L  F  W  *  N  Y  T  T  S  Y  F  S  C  S  Y  Y  S  L  R  Y  N  S  K  I  N  L  T  C  S  V  L  S  *  I  F  C  L  A  W  H  L  R  W  E  Y  E  I  *  E  K  V  S  F  H  D  A  S  S  L  S  H  K  A  N  *  C  L  Q  R  *  Q  I  S  N  L  V  S  *  F  V  S  W  L  K  V  R  F  P  F  P  L  Q  Q  T  I  L  F  V  K  L  H  M  T  F  L  F  S  C  S  Y  Y  S  L  C  S  F  L  K  N  H  D  D  L  *  V  L  F  L  G  S  S  I  K  I  C  M  I  S  Q  G  L  L  R  T  W  F  Q  T  A  L  M  Q  V  P  P  R  C  T  N  L  L  F  Q  S  F  N  I  S  L  *  F  Y  Y  V  C  R  I  I  L  I  S  Y  C  S  *  S  *  V  G  T  Y  I  L  V  P  R  Y  L  *  P  S  L  W  R  Q  *  M  C  L  L  L  L  S  S  V  M  L  P  F  H  R  H  F  N  C  G  F  I  C  F  L  Y  T  C  D  I  K  K  F  C  M  T  N  C  E  F  L  A  M  Q  N  W  Y  C  H  S  D  D  M  H  A  F  P  A  S  F  G  L  T  Q  E  A  L  S  P  I  S  D  V  S  L  *  E  L  L  P  W  E  A  K  W  I  L  *  G  L  G   : G  Q  Q  V  F  C  T  L  N  *  *  L  V  Q  K  :  *  L  F  M  I  Y  F  T  T  N  Q  F  E  G  S  K  C  T  P  N  T  S  S  F  L  K  I  K  Q  V  E  S  N  D  L  H  I  S  T  S  K  V  V  L  *  Y  D  *  S  F  G  L  L  I  *  F  *  S  P  S  I  G  S  R  I  L  R  K  I  S  T  K  N  F  S  C  A  S  F  C  V  L  Q  N  C  *  Y  *  K  :  *  G  *  P  A  L  H  T  C  F  S  L  S  L  L  L  L  S  S  G  F  G  I  H  L  G  S  L  K  N  *  I  Q  A  L  V  H  S  S  F  Q  D  A  S  Q  V  L  M  F  T  Q  *  G  Y  T  C  P  N  *  W  I  K  R  C  D  K  S  S  F  L  H  V  V  S  L  T  T  T  D  *  F  A  G  P  S  V  F  H  Y  P  L  I  L  V  C  C  Q  G  N  R  N  L  I  F  G  *  Y  S  L  Y  W  M  L  V  F  C  T  M  S  L  F  S  L  T  S  V  M  Q  I  S  I  Q  D  L  F  P  K  D  Q  *  I  N  Y  L  T  T  *  L  *  V  L  A  V  H  L  T  L  R  S  K  I  D  L  R  Y  I  H  C  F  W  S  L  Q  R  H  L  W  N  L  R :   I  C  *  G  C  S  N  G  F  Q  Q  P  *  R  P  H  S  H  S  L  K  K  S  L  I  I  K  :  K  V  L  L  N  L  L  F  Y  F  I  F  *  G  C  T  F  F  L  T  E  W  T  G  V  D  G  R  K  I  W :   G  Y  L  V  L  F  H  K  G  C  *  G  V  G  F  Q  Q  P  R  C  W  C  H  Q   : G  S  I  N  I  S  T  *  T  T  K  S  Q  V  Q  D  Q  G  T  T  V  F  P  S  L  P  L  A  Y  I  L  T  *  A  R  E  D  D  S  H  *  L  S  V  *  D  A  G  I  S  S  *  Y  R  F  G  E  *  Y  I  P  Q  H  T  K  R  R  L  K  P  V  L  S  I  N  T  I  S  H  G  L  Y  L  R  F  T  :  E  P  N  H  E  D  P  L  N  L  E  A  A  A  V  E  R  *  S  *  V  *  I  K  C  E  K  G  Y  A  L  W  N  C  S  E  Y  K  L  H  A  M  H  V  T  C  P  L  V  L  V  I  V  F  L  I  R  C  C  I  I  L  R  C  A  G  L  Y  M  V  S  A  N  L  Q  C  H  L  I  *  V  C  H  F  S  F  K  F  F  D  V  Y  P  L  M  Y  L  L  C  W  L  N  S  M  S  *  T  *  S  K  Q  M  E  W  L  Y  I  D  E  R  A  L  P  </first_frame>
            <second_frame>  N  Y  R  R  P  G  N  F  I  R  Y  S  A  E  V  V  R  Y  R  P  L  T  L  R  *  R  C  T  I  K  T  I  Q  Y  Q  R  L  T  F  Q  *  R  R  *  Y  L  L  P  R  F  A  T  L  I  L  :  K  L  S  G  R  S  F  H  G  N  H  H  I  N  V  I  N  F  S  P  Q  V  M  *   : G  Q  V  *  K  *  I  L  L  T  A  K  R  A  N  Y  K  V  K  G  S  A  Q  V  H  V  M  G  S  Q  K  K  V  N  H  S  C  P  C  S  *  P  E  *  E  L  S  L  F  S  Y  P  T  F  Q  D  N  L  R  M  H  S  Y  *  S  *  *  Y  *  R  L  Q  C  L  F  L  S  W  *  N  G  G  A  E  *  L  L  L  L  F  L  L  P  *  K  N  Q  S  V  L  P  *  L  Q  A  S  I  H  L  R  E  S  P  S  T  L  E  E  S  I  A  L  G  C  K  *  F  L  R  F  S  S  P  *  E  C  M  C  Q  N  V  L  G  *  *  R  F  F  *  I  S  *  R  I  L  T  S  A  M  S  C  S  E  F  F  T  W  R  S  S  Q  N  N  L  *  Y  K  T  R  L  T  S  S  A  T  S  N  L  T  L  Y  S  S  S  R  L  F  C  F  F  L  *  Y  F  L  K  L  N  T  Y  I  T  I  N  R  *  S  I  M  R  M  V  E  V  L  S  S  V  E  F  Q  *  N  L  F  S  V  E  P  D  *  T  V  G  *  H  G  T  S  G  G  G  S  M  R  F  W  N  E  I  S  I  S  W  C  F  F  S  A  H  K  V  N  *  C  M  Q  P  Q  R  I  S  M  L  L  V  K  L  D  M  T  F  H  L  F  L  L  L  F  V  L  T  Q  N  G  S  Q  T  C  C  L  L  S  C  K  P  V  A  C  L  A  L  Q  V  G  L  *  D  F  G  E  S  S  I  S  W  C  S  F  S  V  S  *  G  *  L  M  L  E  A  M  T  G  S  Y  A  F  E  L  I  H  V  L  K  T  L  V  S  F  P  P  L  I  E  L  P  F  F  V  I  L  Q  R  *  S  L  F  F  Y  S  Y  Y  S  L  S  L  F  Y  T  Q  *  R  F  G  G  F  H  L  L  M  F  N  Q  T  C  C  L  F  P  V  K  L  K  N  C  C  L  A  R  H  F  I  W  V  Y  E  I  L  G  E  V  S  F  F  G  L  S  F  L  F  P  R  H  T  L  Q  P  C  W  V  S  K  L  L  S  *  S  F  L  A  L  Q  S  S  I  F  F  L  S  L  N  H  C  F  G  E  T  I  R  L  P  T  F  L  V  L  I  T  L  S  G  I  T  Q  K  S  I  *  H  V  L  S  *  A  E  F  F  A  W  R  G  T  S  G  G  N  M  R  F  K  R  K  F  H  F  M  M  H  L  L  C  L  I  R  L  T  D  A  C  S  D  D  R  F  L  T  L  *  A  D  S  C  L  G  L  K  F  G  F  L  S  P  F  S  K  P  S  F  S  *  N  Y  T  *  P  S  S  F  L  V  L  I  T  L  S  A  P  F  *  K  T  M  T  I  C  R  F  S  S  L  E  V  Q  *  K  F  V  *  F  H  K  G  C  *  E  L  G  F  K  Q  L  *  C  R  Y  L  H  G  V  L  I  Y  S  F  K  V  S  I  F  L  Y  N  F  T  M  Y  V  E  L  F  *  L  V  I  V  A  E  V  E  L  E  H  T  Y  W  C  L  D  T  Y  S  P  A  Y  G  D  N  K  C  V  C  F  F  C  L  L  L  C  F  L  F  I  A  I  L  T  V  V  S  Y  A  F  F  T  P  V  T  S  K  N  F  V  *  L  I  V  N  F  *  R  C  K  I  G  T  A  I  Q  M  I  C  M  P  S  Q  Q  A  L  A  L  H  K  R  L  *  A  L  F  L  M  F  L  C  R  N  C  Y  H  G  R  P  N  G  Y  C  K  V  *  E  :  D  N  K  C  F  V  R  *  I  D  D  W  Y  K  S :   N  C  S  *  Y  I  L  R  L  T  S  S  K  E  A  N  A  L  R  T  L  L  V  S  S  K  S  N  K  *  K  V  M  I  Y  I  F  L  L  L  K  L  Y  F  D  M  I  D  L  L  V  C  L  Y  N  F  E  V  Q  V  *  G  L  A  F  S  E  R  S  L  L  R  I  S  L  A  H  R  F  V  S  C  K  I  V  D  I  E  S :   E  D  D  L  L  C  T  R  A  S  P  C  P  C  C  C  C  P  V  G  L  G  F  I  W  V  P  L  K  I  E  S  K  R  W  F  I  Q  V  F  R  M  P  L  R  S  *  C  L  H  N  E  G  I  H  A  Q  I  D  G  *  R  D  V  I  S  H  L  F  Y  T  L  F  P  *  Q  P  R  I  N  L  Q  V  L  Q  Y  F  I  I  H  L  F  *  Y  V  V  K  E  T  E  T  *  S  L  V  N  I  H  Y  T  G  C  L  F  F  V  R  C  L  C  F  P  *  P  P  *  C  K  Y  Q  F  K  I  C  F  Q  R  T  N  K  *  I  T  *  Q  H  S  Y  E  F  W  Q  C  I  *  H  *  E  A  K  *  I  S  D  I  S  T  V  F  G  A  F  K  D  I  C  G  I  *   : G  Y  V  K  D  V  Q  T  V  F  N  N  L  E  G  P  T  L  T  A  *  K  K  V  *  L  L  R :   K  F  C  S  I  Y  Y  F  T  S  S  S  E  A  V  L  F  F  S  R  N  G  L  V  L  M  G  E  R  Y   : G  V  I  L  Y  Y  F  T  R  V  V  E  E  L  V  F  S  S  P  D  A  G  A  T  K  :  V  P  S  I  Y  P  R  E  P  P  K  V  K  C  K  T  K  A  Q  L  F  F  L  L  F  H  L  H  I  F  *  H  E  P  E  K  M  T  L  I  S  F  L  C  E  M  Q  V  Y  H  P  N  I  D  L  E  S  N  I  Y  L  N  I  L  R  E  G  *  N  P  F  S  V  S  T  Q  L  A  M  D  C  I  F  V  S  R :   N  Q  T  M  R  I  P  L  I  S  R  L  L  L  L  R  D  N  P  E  F  K  *  N  V  K  R  A  M  H  C  G  T  V  V  N  I  S  F  T  Q  C  M  *  P  V  L  W  C  W  *  *  C  F  *  L  D  A  V  S  F  *  G  V  L  G  C  I  W  C  P  Q  T  C  S  A  I  L  S  E  C  V  I  L  A  L  S  S  L  T  C  I  H  *  C  I  C  Y  A  G  *  T  A  C  H  E  H  K  V  N  K  W  N  G  Y  I  *  T  K  E  H  C  L </second_frame>
            <third_frame>   I  T  E  D  R  G  T  S  Y  A  T  L  L  K  L  Y  A  T  G  P  *  H  S  G  D  D  V  R  S  K  L  F  N  T  S  A  *  L  S  S  D  G  D  N  T  Y  C  Q  D  S  L  L  L  S  * :   S  Y  L  V  G  A  S  T  A  I  I  T  S  M  *  S  I  F  H  P  R  *  C  K  :  A  K  C  E  N  E  S  C  *  Q  L  K  E  Q  I  T  R  S  R  E  V  H  K  Y  M  *  W  G  V  K  R  R  *  T  I  P  A  P  V  P  D  L  N  K  S  *  V  F  S  V  I  L  L  F  K  I  I  L  E  C  I  R  I  N  H  D  S  I  R  D  Y  N  A  S  F  C  L  G  K  M  E  E  L  N  D  F  F  C  F  F  F  F  L  K  K  I  N  L  F  Y  L  D  Y  K  H  Q  Y  I  Y  A  S  P  H  P  P  *  R  K  A  *  L  L  V  A  N  N  S  *  D  S  L  H  H  E  N  A  C  V  R  M  S  L  V  N  E  D  F  S  E  S  P  D  E  S  *  P  L  Q  C  L  A  L  S  F  S  P  G  E  V  L  K  I  T  F  D  I  R  P  G  *  H  H  Q  L  L  Q  I  *  L  Y  I  H  L  Q  G  Y  F  V  F  F  C  S  T  F  *  N  L  I  R  T  S  L  L  I  D  D  P  S  *  G  W  W  R  F  C  L  P  W  N  F  N  K  T  C  F  L  W  S  L  I  K  Q  L  V  S  T  A  P  R  V  V  G  L  *  D  F  G  M  K  F  P  Y  H  G  V  S  S  Q  L  I  R  L  T  D  A  C  S  H  N  G  F  Q  C  F  W  *  N  *  T  *  P  S  T  Y  F  Y  C  S  L  F  *  L  K  M  A  V  K  H  V  V  C  *  V  V  N  L  L  L  V  W  H  F  K  W  V  C  E  I  L  E  K  V  P  F  H  G  V  P  S  L  S  H  K  A  N  *  C  L  K  P  *  Q  V  P  M  L  L  S  *  F  M  F  *  K  L  *  F  L  S  H  P  S  S  N  S  L  F  S  *  Y  Y  K  G  N  P  C  F  F  I  L  I  T  H  S  L  C  F  I  H  N  E  D  L  E  V  F  I  Y  *  C  S  I  K  H  V  A  S  F  L  S  S  *  R  T  V  A  W  H  G  T  S  F  G  F  M  R  F  W  E  K  F  H  F  L  V  F  L  F  C  S  L  G  I  P  C  S  H  A  G  F  P  S  F  *  A  D  R  F  W  H  C  K  V  Q  F  F  F  C  H  *  I  T  V  L  V  K  L  Y  D  F  L  L  F  L  F  L  L  L  S  P  V  *  L  K  N  Q  F  N  M  F  C  L  E  L  N  F  L  L  G  V  A  P  Q  V  G  I  *  D  L  R  E  S  F  I  S  *  C  I  F  S  V  S  *  G  *  L  M  L  A  A  M  T  D  F  *  P  C  E  L  I  R  V  L  A  *  S  S  V  S  F  P  P  S  A  N  H  P  F  R  E  I  T  H  D  L  P  L  F  L  F  L  L  L  S  L  L  L  F  K  K  P  *  R  F  V  G  S  L  P  W  K  F  N  K  N  L  Y  D  F  T  R  V  V  E  N  L  V  S  N  S  F  D  A  G  T  S  T  V  Y  *  F  T  L  S  K  F  Q  Y  F  F  I  I  L  L  C  M  *  N  Y  F  D  *  L  L  *  L  K  L  S  W  N  I  H  I  G  A  S  I  L  I  A  Q  L  M  E  T  I  N  V  S  A  S  F  V  F  C  Y  A  S  F  S  S  P  F  *  L  W  F  H  M  L  S  L  H  L  *  H  Q  K  I  L  Y  D  *  L  *  I  F  S  D  A  K  L  V  L  P  F  R  *  Y  A  C  L  P  S  K  L  W  P  Y  T  R  G  S  E  P  Y  F  *  C  F  F  V  G  I  V  T  M  G  G  Q  M  D  I  V  R  F  R  R :   T  T  S  V  L  Y  V  E  L  M  I  G  T  K   : V  I  V  H  D  I  F  Y  D  *  P  V  R  R  K  Q  M  H  S  E  H  F  *  F  P  Q  N  Q  T  S  R  K  *  *  F  T  Y  F  Y  F  *  S  C  T  L  I  *  L  I  F  W  F  A  Y  I  I  L  K  S  K  Y  R  V  S  H  S  P  K  D  L  Y  *  E  F  L  L  R  I  V  L  C  P  A  K  L  L  I  L  K   : V  R  M  T  C  F  A  H  V  L  L  L  V  L  A  A  V  V  Q  W  V  W  D  S  S  G  F  P  *  K  L  N  P  S  A  G  S  F  K  F  S  G  C  L  S  G  P  D  V  Y  T  M  R  V  Y  M  P  K  L  M  D  K  E  M  *  *  V  I  F  S  T  R  C  F  P  N  N  H  G  L  I  C  R  S  F  S  I  S  L  S  T  Y  F  S  M  L  S  R  K  Q  K  P  N  L  W  L  I  F  T  I  L  D  A  C  F  L  Y  D  V  F  V  F  L  D  L  R  N  A  N  I  N  S  R  F  V  S  K  G  P  I  N  K  L  L  N  N  I  A  M  S  F  G  S  A  S  D  I  E  K  Q  N  R  S  Q  I  Y  P  L  F  L  E  P  S  K  T  F  V  E  F  K  :  D  M  L  R  M  F  K  R  F  S  T  T  L  K  A  P  L  S  Q  L  K  K  K  F  N  Y  *   : E  S  S  A  Q  F  I  I  L  L  H  L  L  R  L  Y  F  F  S  H  G  M  D  W  C  *  W  E  K  D  M  :  G  L  S  C  I  I  S  Q  G  L  L  R  S  W  F  S  A  A  Q  M  L  V  P  P  R :   F  H  Q  Y  I  H  V  N  H  Q  K  S  S  A  R  P  R  H  N  C  F  S  F  S  S  T  C  I  Y  S  D  M  S  Q  R  R  *  L  S  L  A  F  C  V  R  C  R  Y  I  I  L  I  S  I  W  R  V  I  Y  T  S  T  Y  *  E  K  V  E  T  R  S  Q  Y  Q  H  N  *  P  W  I  V  S  S  F  H   : G  T  K  P  *  G  S  P  *  S  R  G  C  C  C  *  E  I  I  L  S  L  N  K  M  *  K  G  L  C  I  V  E  L  *  *  I  *  A  S  R  N  A  C  N  L  S  S  G  A  G  N  S  V  S  D  *  M  L  Y  H  F  E  V  C  W  V  V  Y  G  V  R  K  L  A  V  P  S  Y  L  S  V  S  F  *  L  *  V  L  *  R  V  S  I  D  V  S  V  M  L  A  E  Q  H  V  M  N  I  K  *  T  N  G  M  V  I  Y  R  R  K  S  I  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79584" stop="79243"/>
                    <exon start="78460" stop="78380"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>420</number_coding_nucleotides>
                  <number_encoded_amino_acids>140</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIFSTRCFPNNHGLICRSFSISLSTYFSMLSRKQKPNLWLIFTILDACFLYDVFVFLDLRNANINSRFVSKGPINKLLNNIAMSFGSASDIEKQNRSQIYPLFLEPSKTFVEFKDMLRMFKRFSTTLKAPLSQLKKKFNY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78386" stop="78379"/>
                    <exon start="78026" stop="77935"/>
                    <exon start="77356" stop="77283"/>
                    <exon start="76854" stop="76762"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLRKFCSIYYFTSSSEAVLFFSRNGLVLMGERYGVILYYFTRVVEELVFSSPDAGATKVPSIYPREPPKVKCKTKAQLFFLLFHLHIF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82419" stop="82183"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MTSSAFSSSLKKSICFTLITSINTFTRVPIHPRGKHSSWLQIILKILFTMRMHVSECPWLMKIFLNLLTNLDLCNVLL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81597" stop="81364"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDSCFENFSFFPTPHRTPFFRDITKVIPVFLFLLLTLSVLYTMKIWRFSFIDVQSNMLPLSCQAKELLLGTALHLGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83177" stop="83054"/>
                    <exon start="82841" stop="82769"/>
                    <exon start="82669" stop="82636"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SCTLPALNTPVTMYDQNYSIPALNFPVTAIIPTAKIRYSYLEAIWSELPRQSSHQCDQFFTPGDVRPSVKMNLVNS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="6"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80607" stop="80380"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MCLLLLSSVMLPFHRHFNCGFICFLYTCDIKKFCMTNCEFLAMQNWYCHSDDMHAFPASFGLTQEALSPISDVSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="7"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79939" stop="79857"/>
                    <exon start="79781" stop="79640"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLAFSERSLLRISLAHRFVSCKIVDIESEDDLLCTRASPCPCCCCPVGLGFIWVPLKIESKRWFIQVFRMPLRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="83204" e_stop="83054"/>
            <exon e_start="82841" e_stop="82769"/>
            <exon e_start="82669" e_stop="82575"/>
            <exon e_start="80379" e_stop="80334"/>
            <exon e_start="80244" e_stop="80201"/>
            <exon e_start="79781" e_stop="79535"/>
            <exon e_start="79324" e_stop="79273"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.940" acc_prob="0.506" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.926" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="0.843" e_score="1.000"/>
          <exon-intron don_prob="0.649" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.644" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="83204" e_stop="83054" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="0.940" acc_prob="0.506">
            <gDNA_intron_boundary i_start="83053" i_stop="82842" i_length="212"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82841" e_stop="82769" e_length="73"/>
          </exon>
          <intron i_serial="2" don_prob="0.936" acc_prob="0.985">
            <gDNA_intron_boundary i_start="82768" i_stop="82670" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="82669" e_stop="82575" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.923" acc_prob="0.926">
            <gDNA_intron_boundary i_start="82574" i_stop="80380" i_length="2195"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="80379" e_stop="80334" e_length="46"/>
          </exon>
          <intron i_serial="4" don_prob="0.883" acc_prob="0.843">
            <gDNA_intron_boundary i_start="80333" i_stop="80245" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="80244" e_stop="80201" e_length="44"/>
          </exon>
          <intron i_serial="5" don_prob="0.649" acc_prob="0.989">
            <gDNA_intron_boundary i_start="80200" i_stop="79782" i_length="419"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="79781" e_stop="79535" e_length="247"/>
          </exon>
          <intron i_serial="6" don_prob="0.644" acc_prob="0.000">
            <gDNA_intron_boundary i_start="79534" i_stop="79325" i_length="210"/>
          </intron>
          <exon e_serial="7" e_score="0.962">
            <gDNA_exon_boundary e_start="79324" e_stop="79273" e_length="52"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83204" stop="83054"/>
              <exon start="82841" stop="82769"/>
              <exon start="82669" stop="82575"/>
              <exon start="80379" stop="80334"/>
              <exon start="80244" stop="80201"/>
              <exon start="79781" stop="79535"/>
              <exon start="79324" stop="79273"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578482" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGGGAACTTCATACGCTACTCTGCTGAAGTTGTACGCTACCGGCCCTTAACACTCCGGTGACGATGTACGATCAAAACTATTCAATACCAGCGCTTAACTTTCCAGTGACGGCGATAATACCTACTGCCAAGATTCGCTACTCTTATCTTG : AAGCTATCTGGTCGGAGCTTCCACGGCAATCATCACATCAATGTGATCAATTTTTCACCCCAGGTGATGTAAG : GCCAAGTGTGAAAATGAATCTTGTTAACAGCTAAAAGAGCAAATTACAAGGTCAAGGGAAGTGCACAAGTACATGTGATGGGGAGTCAAAAGAAG : GAATTGTTACCATGGGAGGCCAAATGGATATTGTAAGGTTTAGGAG : GACAACAAGTGTTTTGTACGTTGAATTGATGATTGGTACAAAAG : TGAGGATGACCTGCTTTGCACACGTGCTTCTCCTTGTCCTTGCTGCTGTTGTCCAGTGGGTTTGGGATTCATCTGGGTTCCCTTAAAAATTGAATCCAAGCGCTGGTTCATTCAAGTTTTCAGGATGCCTCTCAGGTCCTGATGTTTACACAATGAGGGTATACATGCCCAAATTGATGGATAAAGAGATGTGATAAGTCATCTTTTCTACACGTTGTTTCCCTAACAACCACGGATTAATTTGCAG : TGCATCTGACATTGAGAAGCAAAATAGATCTCAGATATATCCACTGTTTTTG</gDNA_template>
            <first_frame> G  E  L  H  T  L  L  C  *  S  C  T  L  P  A  L  N  T  P  V  T  M  Y  D  Q  N  Y  S  I  P  A  L  N  F  P  V  T  A  I  I  P  T  A  K  I  R  Y  S  Y  L   : E  A  I  W  S  E  L  P  R  Q  S  S  H  Q  C  D  Q  F  F  T  P  G  D  V  R :   P  S  V  K  M  N  L  V  N  S  *  K  S  K  L  Q  G  Q  G  K  C  T  S  T  C  D  G  E  S  K  E   : G  I  V  T  M  G  G  Q  M  D  I  V  R  F  R  R :   T  T  S  V  L  Y  V  E  L  M  I  G  T  K   : V  R  M  T  C  F  A  H  V  L  L  L  V  L  A  A  V  V  Q  W  V  W  D  S  S  G  F  P  *  K  L  N  P  S  A  G  S  F  K  F  S  G  C  L  S  G  P  D  V  Y  T  M  R  V  Y  M  P  K  L  M  D  K  E  M  *  *  V  I  F  S  T  R  C  F  P  N  N  H  G  L  I  C  S :   A  S  D  I  E  K  Q  N  R  S  Q  I  Y  P  L  F  L </first_frame>
            <second_frame>  G  N  F  I  R  Y  S  A  E  V  V  R  Y  R  P  L  T  L  R  *  R  C  T  I  K  T  I  Q  Y  Q  R  L  T  F  Q  *  R  R  *  Y  L  L  P  R  F  A  T  L  I  L  :  K  L  S  G  R  S  F  H  G  N  H  H  I  N  V  I  N  F  S  P  Q  V  M  *   : G  Q  V  *  K  *  I  L  L  T  A  K  R  A  N  Y  K  V  K  G  S  A  Q  V  H  V  M  G  S  Q  K  K  :  E  L  L  P  W  E  A  K  W  I  L  *  G  L  G   : G  Q  Q  V  F  C  T  L  N  *  *  L  V  Q  K  :  *  G  *  P  A  L  H  T  C  F  S  L  S  L  L  L  L  S  S  G  F  G  I  H  L  G  S  L  K  N  *  I  Q  A  L  V  H  S  S  F  Q  D  A  S  Q  V  L  M  F  T  Q  *  G  Y  T  C  P  N  *  W  I  K  R  C  D  K  S  S  F  L  H  V  V  S  L  T  T  T  D  *  F  A   : V  H  L  T  L  R  S  K  I  D  L  R  Y  I  H  C  F   </second_frame>
            <third_frame>   G  T  S  Y  A  T  L  L  K  L  Y  A  T  G  P  *  H  S  G  D  D  V  R  S  K  L  F  N  T  S  A  *  L  S  S  D  G  D  N  T  Y  C  Q  D  S  L  L  L  S  * :   S  Y  L  V  G  A  S  T  A  I  I  T  S  M  *  S  I  F  H  P  R  *  C  K  :  A  K  C  E  N  E  S  C  *  Q  L  K  E  Q  I  T  R  S  R  E  V  H  K  Y  M  *  W  G  V  K  R  R :   N  C  Y  H  G  R  P  N  G  Y  C  K  V  *  E  :  D  N  K  C  F  V  R  *  I  D  D  W  Y  K  S :   E  D  D  L  L  C  T  R  A  S  P  C  P  C  C  C  C  P  V  G  L  G  F  I  W  V  P  L  K  I  E  S  K  R  W  F  I  Q  V  F  R  M  P  L  R  S  *  C  L  H  N  E  G  I  H  A  Q  I  D  G  *  R  D  V  I  S  H  L  F  Y  T  L  F  P  *  Q  P  R  I  N  L  Q  :  C  I  *  H  *  E  A  K  *  I  S  D  I  S  T  V  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82635" stop="82575"/>
                    <exon start="80379" stop="80334"/>
                    <exon start="80244" stop="80201"/>
                    <exon start="79781" stop="79696"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSKLQGQGKCTSTCDGESKEGIVTMGGQMDIVRFRRTTSVLYVELMIGTKVRMTCFAHVLLLVLAAVVQWVWDSSGFP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83177" stop="83054"/>
                    <exon start="82841" stop="82769"/>
                    <exon start="82669" stop="82636"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SCTLPALNTPVTMYDQNYSIPALNFPVTAIIPTAKIRYSYLEAIWSELPRQSSHQCDQFFTPGDVRPSVKMNLVNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="97557" PGL_stop="99055"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97557" e_stop="99055"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="97557" e_stop="99055" e_length="1499"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97557" stop="99055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573348" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTAGTGGACCCTTAATGTTGAAACTTCTGTACAGCTTCGGATATCCTAAACTTGCAATCTCCTTCTTCTTCATCTATCTTTGCGAAACCTAATTAACTGAGAAATTAGGTCGAAAGAATGAGTCTTTCAACAACAATTACAACTTGGGGATACACCCATCATCCCTTTTCTGACGTTGGAAATAAAGGCAGATCCAGATTTCGCTCTCCAGGATTCATGCCTCATCTGAAGATGAAATTCTTCACTAACCCTTCTTCTCTTTCTGTCTCAGCTCTTCTTACAAAGGAGCAAGAAAGCAAGAGCAAGAAACAAGCAATGGAGTTTAAAGAATACGTTCTTGAAAAGGCTGTTTCTGTCAACAAGGCTTTGGAATCTGCAGTCTCTATCAAGGAACCGGTCATGATTCATGAGTCCATGAGGTACTCTCTTCTTGCTGGTGGGAAAAGAATTAGACCCATGTTGTGTATAGCTGCTTGTGAGCTTGTTGGTGGGGTTGAGTCCACAGCCATGCCAGCAGCTTGTGCTGTTGAAATGATTCACACCATGTCTTTGATTCATGATGACCTTCCTTGTATGGATAATGATGATCTTAGAAGAGGGAAACCTACAAATCACAAGATTTATGGGGAGGATGTGGCTGTTTTAGCAGGGGATGCACTTCTTGCATTAGCCTTTGAGCACATTGCTACTCATACAAAAGGGGTTTCTTCTGATAGAATTGTGAGGGTGATTGGTGAGTTGGCGAAGTGTATTGGGGCAGAGGGACTTGTAGCTGGTCAGGTTGTAGATATAATTTCAGAAGGCATTTCTGATGTTGATTTGAAGCATTTAGAGTTCATTCATCTGCACAAGACTGCAGCTTTGTTAGAAGGGTCAGTGGTGCTAGGGGCTATATTAGGAGGTGCACCAGATGAAGATGTGGAAAAGCTAAGAAAATTTGCAAGATGTATTGGTTTGTTATTTCAAGTTGTGGATGATATTCTTGATGTCACAAAGTCTTCTCAGCAATTGGGGAAAACAGCTGGGAAGGACTTGGTTGCTGATAAGGTAACTTATCCCAAACTGATAGGTATTGAGAAATCTAGGGAGTTTGCTGAGGAGTTAAACAAAGAAGCGAAAGCTCAGCTTGTTGGATTTGATCAAGAGAAAGCAGCTCCATTGTTTGCTCTTGCAAATTATATTGCTTACAGAGAGAATTAAATTGTAACAACAGAATTCTCAGTGATTCCTGATAGTATTAAACAATGAATATATGAATTTTTGGTCAACCAATTTGTATATTTAAAGTTTAAGAAGTAAGTACAAGGCAAGGACATGAGTGTGTACATTTAAAGATTCAAACTTCTAACATCTTGAATGAAATAATGGCCCATACACGTTTCTATTCTTCTTCTCCTTATGATACTCTTCAACTGATATCTCATTCTGTGGATGTATTTGGCCATTTTTTTTGTTAAAGTCTATTTCTAGCTTCTATATGAAGTCTTATATGCAGCTT</gDNA_template>
            <first_frame> S  S  G  P  L  M  L  K  L  L  Y  S  F  G  Y  P  K  L  A  I  S  F  F  F  I  Y  L  C  E  T  *  L  T  E  K  L  G  R  K  N  E  S  F  N  N  N  Y  N  L  G  I  H  P  S  S  L  F  *  R  W  K  *  R  Q  I  Q  I  S  L  S  R  I  H  A  S  S  E  D  E  I  L  H  *  P  F  F  S  F  C  L  S  S  S  Y  K  G  A  R  K  Q  E  Q  E  T  S  N  G  V  *  R  I  R  S  *  K  G  C  F  C  Q  Q  G  F  G  I  C  S  L  Y  Q  G  T  G  H  D  S  *  V  H  E  V  L  S  S  C  W  W  E  K  N  *  T  H  V  V  Y  S  C  L  *  A  C  W  W  G  *  V  H  S  H  A  S  S  L  C  C  *  N  D  S  H  H  V  F  D  S  *  *  P  S  L  Y  G  *  *  *  S  *  K  R  E  T  Y  K  S  Q  D  L  W  G  G  C  G  C  F  S  R  G  C  T  S  C  I  S  L  *  A  H  C  Y  S  Y  K  R  G  F  F  *  *  N  C  E  G  D  W  *  V  G  E  V  Y  W  G  R  G  T  C  S  W  S  G  C  R  Y  N  F  R  R  H  F  *  C  *  F  E  A  F  R  V  H  S  S  A  Q  D  C  S  F  V  R  R  V  S  G  A  R  G  Y  I  R  R  C  T  R  *  R  C  G  K  A  K  K  I  C  K  M  Y  W  F  V  I  S  S  C  G  *  Y  S  *  C  H  K  V  F  S  A  I  G  E  N  S  W  E  G  L  G  C  *  *  G  N  L  S  Q  T  D  R  Y  *  E  I  *  G  V  C  *  G  V  K  Q  R  S  E  S  S  A  C  W  I  *  S  R  E  S  S  S  I  V  C  S  C  K  L  Y  C  L  Q  R  E  L  N  C  N  N  R  I  L  S  D  S  *  *  Y  *  T  M  N  I  *  I  F  G  Q  P  I  C  I  F  K  V  *  E  V  S  T  R  Q  G  H  E  C  V  H  L  K  I  Q  T  S  N  I  L  N  E  I  M  A  H  T  R  F  Y  S  S  S  P  Y  D  T  L  Q  L  I  S  H  S  V  D  V  F  G  H  F  F  C  *  S  L  F  L  A  S  I  *  S  L  I  C  S   </first_frame>
            <second_frame>  V  V  D  P  *  C  *  N  F  C  T  A  S  D  I  L  N  L  Q  S  P  S  S  S  S  I  F  A  K  P  N  *  L  R  N  *  V  E  R  M  S  L  S  T  T  I  T  T  W  G  Y  T  H  H  P  F  S  D  V  G  N  K  G  R  S  R  F  R  S  P  G  F  M  P  H  L  K  M  K  F  F  T  N  P  S  S  L  S  V  S  A  L  L  T  K  E  Q  E  S  K  S  K  K  Q  A  M  E  F  K  E  Y  V  L  E  K  A  V  S  V  N  K  A  L  E  S  A  V  S  I  K  E  P  V  M  I  H  E  S  M  R  Y  S  L  L  A  G  G  K  R  I  R  P  M  L  C  I  A  A  C  E  L  V  G  G  V  E  S  T  A  M  P  A  A  C  A  V  E  M  I  H  T  M  S  L  I  H  D  D  L  P  C  M  D  N  D  D  L  R  R  G  K  P  T  N  H  K  I  Y  G  E  D  V  A  V  L  A  G  D  A  L  L  A  L  A  F  E  H  I  A  T  H  T  K  G  V  S  S  D  R  I  V  R  V  I  G  E  L  A  K  C  I  G  A  E  G  L  V  A  G  Q  V  V  D  I  I  S  E  G  I  S  D  V  D  L  K  H  L  E  F  I  H  L  H  K  T  A  A  L  L  E  G  S  V  V  L  G  A  I  L  G  G  A  P  D  E  D  V  E  K  L  R  K  F  A  R  C  I  G  L  L  F  Q  V  V  D  D  I  L  D  V  T  K  S  S  Q  Q  L  G  K  T  A  G  K  D  L  V  A  D  K  V  T  Y  P  K  L  I  G  I  E  K  S  R  E  F  A  E  E  L  N  K  E  A  K  A  Q  L  V  G  F  D  Q  E  K  A  A  P  L  F  A  L  A  N  Y  I  A  Y  R  E  N  *  I  V  T  T  E  F  S  V  I  P  D  S  I  K  Q  *  I  Y  E  F  L  V  N  Q  F  V  Y  L  K  F  K  K  *  V  Q  G  K  D  M  S  V  Y  I  *  R  F  K  L  L  T  S  *  M  K  *  W  P  I  H  V  S  I  L  L  L  L  M  I  L  F  N  *  Y  L  I  L  W  M  Y  L  A  I  F  F  V  K  V  Y  F  *  L  L  Y  E  V  L  Y  A  A  </second_frame>
            <third_frame>   *  W  T  L  N  V  E  T  S  V  Q  L  R  I  S  *  T  C  N  L  L  L  L  H  L  S  L  R  N  L  I  N  *  E  I  R  S  K  E  *  V  F  Q  Q  Q  L  Q  L  G  D  T  P  I  I  P  F  L  T  L  E  I  K  A  D  P  D  F  A  L  Q  D  S  C  L  I  *  R  *  N  S  S  L  T  L  L  L  F  L  S  Q  L  F  L  Q  R  S  K  K  A  R  A  R  N  K  Q  W  S  L  K  N  T  F  L  K  R  L  F  L  S  T  R  L  W  N  L  Q  S  L  S  R  N  R  S  *  F  M  S  P  *  G  T  L  F  L  L  V  G  K  E  L  D  P  C  C  V  *  L  L  V  S  L  L  V  G  L  S  P  Q  P  C  Q  Q  L  V  L  L  K  *  F  T  P  C  L  *  F  M  M  T  F  L  V  W  I  M  M  I  L  E  E  G  N  L  Q  I  T  R  F  M  G  R  M  W  L  F  *  Q  G  M  H  F  L  H  *  P  L  S  T  L  L  L  I  Q  K  G  F  L  L  I  E  L  *  G  *  L  V  S  W  R  S  V  L  G  Q  R  D  L  *  L  V  R  L  *  I  *  F  Q  K  A  F  L  M  L  I  *  S  I  *  S  S  F  I  C  T  R  L  Q  L  C  *  K  G  Q  W  C  *  G  L  Y  *  E  V  H  Q  M  K  M  W  K  S  *  E  N  L  Q  D  V  L  V  C  Y  F  K  L  W  M  I  F  L  M  S  Q  S  L  L  S  N  W  G  K  Q  L  G  R  T  W  L  L  I  R  *  L  I  P  N  *  *  V  L  R  N  L  G  S  L  L  R  S  *  T  K  K  R  K  L  S  L  L  D  L  I  K  R  K  Q  L  H  C  L  L  L  Q  I  I  L  L  T  E  R  I  K  L  *  Q  Q  N  S  Q  *  F  L  I  V  L  N  N  E  Y  M  N  F  W  S  T  N  L  Y  I  *  S  L  R  S  K  Y  K  A  R  T  *  V  C  T  F  K  D  S  N  F  *  H  L  E  *  N  N  G  P  Y  T  F  L  F  F  F  S  L  *  Y  S  S  T  D  I  S  F  C  G  C  I  W  P  F  F  L  L  K  S  I  S  S  F  Y  M  K  S  Y  M  Q  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97666" stop="98757"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1089</number_coding_nucleotides>
                  <number_encoded_amino_acids>363</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VERMSLSTTITTWGYTHHPFSDVGNKGRSRFRSPGFMPHLKMKFFTNPSSLSVSALLTKEQESKSKKQAMEFKEYVLEKAVSVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRPMLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAFEHIATHTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISDVDLKHLEFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKDLVADKVTYPKLIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALANYIAYREN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="105004" PGL_stop="104557"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105004" e_stop="104557"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105004" e_stop="104557" e_length="448"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105004" stop="104557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602468" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATATATTAGACTTCAAAATTTAACTTCAAATTTTAATTTTGATCTTCAACTTTCATAGTACATAAATACGCACTTTAATTATCCTACTATTTAATAAATAAGCACGTGATTTTTATCTGTCAAAACGCGTGAAAATCACGTATTCTACGCGCGTGAGGAGTAATTTTTTAAGCTCACAACAGAAAAAAATGCTGAAATGACAATTCTACCACCCCGGATTCCGTCCAATCTCCGACAACCCAAAAAACCCATTCATTTTGCCCAACCGTTCTTCTTCTTCCTCCACACCGAAGCACAACCCATGAAGCGAACGAACTTCAAACTCGCTGAACCCACCAAATACTTGACCCCAAACCCATCAGATTTGTCGTCTCCGGCGAGAATCATCACCAAACTGCTGCAACCAGCAGCTCGAACAAGACACAAAACAGCAGCCAAATGACCCCCA</gDNA_template>
            <first_frame> I  Y  *  T  S  K  F  N  F  K  F  *  F  *  S  S  T  F  I  V  H  K  Y  A  L  *  L  S  Y  Y  L  I  N  K  H  V  I  F  I  C  Q  N  A  *  K  S  R  I  L  R  A  *  G  V  I  F  *  A  H  N  R  K  K  C  *  N  D  N  S  T  T  P  D  S  V  Q  S  P  T  T  Q  K  T  H  S  F  C  P  T  V  L  L  L  P  P  H  R  S  T  T  H  E  A  N  E  L  Q  T  R  *  T  H  Q  I  L  D  P  K  P  I  R  F  V  V  S  G  E  N  H  H  Q  T  A  A  T  S  S  S  N  K  T  Q  N  S  S  Q  M  T  P  </first_frame>
            <second_frame>  Y  I  R  L  Q  N  L  T  S  N  F  N  F  D  L  Q  L  S  *  Y  I  N  T  H  F  N  Y  P  T  I  *  *  I  S  T  *  F  L  S  V  K  T  R  E  N  H  V  F  Y  A  R  E  E  *  F  F  K  L  T  T  E  K  N  A  E  M  T  I  L  P  P  R  I  P  S  N  L  R  Q  P  K  K  P  I  H  F  A  Q  P  F  F  F  F  L  H  T  E  A  Q  P  M  K  R  T  N  F  K  L  A  E  P  T  K  Y  L  T  P  N  P  S  D  L  S  S  P  A  R  I  I  T  K  L  L  Q  P  A  A  R  T  R  H  K  T  A  A  K  *  P  P </second_frame>
            <third_frame>   I  L  D  F  K  I  *  L  Q  I  L  I  L  I  F  N  F  H  S  T  *  I  R  T  L  I  I  L  L  F  N  K  *  A  R  D  F  Y  L  S  K  R  V  K  I  T  Y  S  T  R  V  R  S  N  F  L  S  S  Q  Q  K  K  M  L  K  *  Q  F  Y  H  P  G  F  R  P  I  S  D  N  P  K  N  P  F  I  L  P  N  R  S  S  S  S  S  T  P  K  H  N  P  *  S  E  R  T  S  N  S  L  N  P  P  N  T  *  P  Q  T  H  Q  I  C  R  L  R  R  E  S  S  P  N  C  C  N  Q  Q  L  E  Q  D  T  K  Q  Q  P  N  D  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104841" stop="104563"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFKLTTEKNAEMTILPPRIPSNLRQPKKPIHFAQPFFFFLHTEAQPMKRTNFKLAEPTKYLTPNPSDLSSPARIITKLLQPAARTRHKTAAK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="107071" PGL_stop="108456"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107071" e_stop="107349"/>
            <exon e_start="107438" e_stop="107559"/>
            <exon e_start="107641" e_stop="108456"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107071" e_stop="107349" e_length="279"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="107350" i_stop="107437" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107438" e_stop="107559" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.988">
            <gDNA_intron_boundary i_start="107560" i_stop="107640" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107641" e_stop="108456" e_length="816"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107071" stop="107349"/>
              <exon start="107438" stop="107559"/>
              <exon start="107641" stop="108456"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562649" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCAGTATCAACAACAACCTCATTTAAGTCTTCTTTTTTGACCGCTAGAACCAACAAATTGTTCAGCAATGGCCACTGTTTCCTCAGCCTCTGCTGCTCTTAGAACCATTTCTTCTTCCTCATCCAAGCTATCTTCTGCCTTCCAAACTAAAAAGATCCAATCTTTTAAACTACCTAACCCTCTCATTTCTCAGAATCATAAACTTACTACCACCTCTACTACTGCTTCCAGATCATTTTCCTGCAAGAGCCAGAGCACCTCAACAGATTCAACTAACA : CTGAAGTTCAAGAACTTAGTGTCTATGAGATCAATGAACGTGATCGTGGAAGCCCTGCTTATCTTCGATTGAGCCAAAAGACTGTTAATTCACTCGGAGATCTTGTCCCCTTTAGCAACAAG : CTATATACTGCAGATCTAAAGAAGAGAATTGGAATAACAGCAGGACTCTGCATTCTGATCAAGCACGAAGAAGAGAAGAAAGGAGATCGCTATGAAGCTGTTTACAGCTTCTACTTCGGCGATTACGGTCATATCGCCGTTCAGGGAGCGTACTTAACCTATGAAGAAACTTACCTAGCCGTCACCGGTGGATCCGGCATATTTGCAGGGGTTTCCGGTCAAGTGAAATTGCAGCAACTCATTTTCCCTTTCAAGCTATTTTACACTTTTTACTTGAAGGGGATCCCCGGTCTGCCATCTGAATTGTTGTGTACGGCGGTTCCTCCGTCGCCGACGGTGGAGCCAACACCTGAAGCTAAAGCTTGTGAGGAAGGGGCCGCACTGAAAAATTACACTAATTAAGTGGGGGTGTTGATGTGCAAATCACAACTTTTGTTGGGGTCGTTCTGAAATAATCAATAACTACGTGCTCTAGAATTAAAAAAAAAAGTAACATCAACGTCCTTTTATTTTGCAATTTTTGGTATGTTATTTGTCGTTTTGTTGGGTAAAAGTTTAACTGTTTTGTTAGTACTTTGTATGTATGCCTATTATCTGAATTGTATCCCTATGTGATACGTTCCATCTTTATTATAAAGTCCAGAAAAAGATAAAAATGAAAAAATTATTTGGTAATGAATTCAAGGACGTATTTGTTCGATAACTATTTGAACCATAGAGTTCTCCCTTACAAAGGAGATTTCATATCCAAAGAGATCGAAATTGAGACCACTATGCTCTGAAGGGCTTGAATCCAAGACCTCACCGCAACCCTCG</gDNA_template>
            <first_frame> I  S  I  N  N  N  L  I  *  V  F  F  F  D  R  *  N  Q  Q  I  V  Q  Q  W  P  L  F  P  Q  P  L  L  L  L  E  P  F  L  L  P  H  P  S  Y  L  L  P  S  K  L  K  R  S  N  L  L  N  Y  L  T  L  S  F  L  R  I  I  N  L  L  P  P  L  L  L  L  P  D  H  F  P  A  R  A  R  A  P  Q  Q  I  Q  L  T  :  L  K  F  K  N  L  V  S  M  R  S  M  N  V  I  V  E  A  L  L  I  F  D  *  A  K  R  L  L  I  H  S  E  I  L  S  P  L  A  T  S :   Y  I  L  Q  I  *  R  R  E  L  E  *  Q  Q  D  S  A  F  *  S  S  T  K  K  R  R  K  E  I  A  M  K  L  F  T  A  S  T  S  A  I  T  V  I  S  P  F  R  E  R  T  *  P  M  K  K  L  T  *  P  S  P  V  D  P  A  Y  L  Q  G  F  P  V  K  *  N  C  S  N  S  F  S  L  S  S  Y  F  T  L  F  T  *  R  G  S  P  V  C  H  L  N  C  C  V  R  R  F  L  R  R  R  R  W  S  Q  H  L  K  L  K  L  V  R  K  G  P  H  *  K  I  T  L  I  K  W  G  C  *  C  A  N  H  N  F  C  W  G  R  S  E  I  I  N  N  Y  V  L  *  N  *  K  K  K  *  H  Q  R  P  F  I  L  Q  F  L  V  C  Y  L  S  F  C  W  V  K  V  *  L  F  C  *  Y  F  V  C  M  P  I  I  *  I  V  S  L  C  D  T  F  H  L  Y  Y  K  V  Q  K  K  I  K  M  K  K  L  F  G  N  E  F  K  D  V  F  V  R  *  L  F  E  P  *  S  S  P  L  Q  R  R  F  H  I  Q  R  D  R  N  *  D  H  Y  A  L  K  G  L  N  P  R  P  H  R  N  P   </first_frame>
            <second_frame>  S  V  S  T  T  T  S  F  K  S  S  F  L  T  A  R  T  N  K  L  F  S  N  G  H  C  F  L  S  L  C  C  S  *  N  H  F  F  F  L  I  Q  A  I  F  C  L  P  N  *  K  D  P  I  F  *  T  T  *  P  S  H  F  S  E  S  *  T  Y  Y  H  L  Y  Y  C  F  Q  I  I  F  L  Q  E  P  E  H  L  N  R  F  N  *  H :   *  S  S  R  T  *  C  L  *  D  Q  *  T  *  S  W  K  P  C  L  S  S  I  E  P  K  D  C  *  F  T  R  R  S  C  P  L  *  Q  Q   : A  I  Y  C  R  S  K  E  E  N  W  N  N  S  R  T  L  H  S  D  Q  A  R  R  R  E  E  R  R  S  L  *  S  C  L  Q  L  L  L  R  R  L  R  S  Y  R  R  S  G  S  V  L  N  L  *  R  N  L  P  S  R  H  R  W  I  R  H  I  C  R  G  F  R  S  S  E  I  A  A  T  H  F  P  F  Q  A  I  L  H  F  L  L  E  G  D  P  R  S  A  I  *  I  V  V  Y  G  G  S  S  V  A  D  G  G  A  N  T  *  S  *  S  L  *  G  R  G  R  T  E  K  L  H  *  L  S  G  G  V  D  V  Q  I  T  T  F  V  G  V  V  L  K  *  S  I  T  T  C  S  R  I  K  K  K  S  N  I  N  V  L  L  F  C  N  F  W  Y  V  I  C  R  F  V  G  *  K  F  N  C  F  V  S  T  L  Y  V  C  L  L  S  E  L  Y  P  Y  V  I  R  S  I  F  I  I  K  S  R  K  R  *  K  *  K  N  Y  L  V  M  N  S  R  T  Y  L  F  D  N  Y  L  N  H  R  V  L  P  Y  K  G  D  F  I  S  K  E  I  E  I  E  T  T  M  L  *  R  A  *  I  Q  D  L  T  A  T  L  </second_frame>
            <third_frame>   Q  Y  Q  Q  Q  P  H  L  S  L  L  F  *  P  L  E  P  T  N  C  S  A  M  A  T  V  S  S  A  S  A  A  L  R  T  I  S  S  S  S  S  K  L  S  S  A  F  Q  T  K  K  I  Q  S  F  K  L  P  N  P  L  I  S  Q  N  H  K  L  T  T  T  S  T  T  A  S  R  S  F  S  C  K  S  Q  S  T  S  T  D  S  T  N   : T  E  V  Q  E  L  S  V  Y  E  I  N  E  R  D  R  G  S  P  A  Y  L  R  L  S  Q  K  T  V  N  S  L  G  D  L  V  P  F  S  N  K  :  L  Y  T  A  D  L  K  K  R  I  G  I  T  A  G  L  C  I  L  I  K  H  E  E  E  K  K  G  D  R  Y  E  A  V  Y  S  F  Y  F  G  D  Y  G  H  I  A  V  Q  G  A  Y  L  T  Y  E  E  T  Y  L  A  V  T  G  G  S  G  I  F  A  G  V  S  G  Q  V  K  L  Q  Q  L  I  F  P  F  K  L  F  Y  T  F  Y  L  K  G  I  P  G  L  P  S  E  L  L  C  T  A  V  P  P  S  P  T  V  E  P  T  P  E  A  K  A  C  E  E  G  A  A  L  K  N  Y  T  N  *  V  G  V  L  M  C  K  S  Q  L  L  L  G  S  F  *  N  N  Q  *  L  R  A  L  E  L  K  K  K  V  T  S  T  S  F  Y  F  A  I  F  G  M  L  F  V  V  L  L  G  K  S  L  T  V  L  L  V  L  C  M  Y  A  Y  Y  L  N  C  I  P  M  *  Y  V  P  S  L  L  *  S  P  E  K  D  K  N  E  K  I  I  W  *  *  I  Q  G  R  I  C  S  I  T  I  *  T  I  E  F  S  L  T  K  E  I  S  Y  P  K  R  S  K  L  R  P  L  C  S  E  G  L  E  S  K  T  S  P  Q  P  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0116F10.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107112" stop="107349"/>
                    <exon start="107438" stop="107559"/>
                    <exon start="107641" stop="108042"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLEPTNCSAMATVSSASAALRTISSSSSKLSSAFQTKKIQSFKLPNPLISQNHKLTTTSTTASRSFSCKSQSTSTDSTNTEVQELSVYEINERDRGSPAYLRLSQKTVNSLGDLVPFSNKLYTADLKKRIGITAGLCILIKHEEEKKGDRYEAVYSFYFGDYGHIAVQGAYLTYEETYLAVTGGSGIFAGVSGQVKLQQLIFPFKLFYTFYLKGIPGLPSELLCTAVPPSPTVEPTPEAKACEEGAALKNYTN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 37 chains have been computed
$ 
$ memory statistics:
$ 31408 bytes spliced alignments in total
$ 14 spliced alignments have been stored
$ 2243 bytes was the average size of a spliced alignment
$ 21264 bytes predicted gene locations in total
$ 13 predicted gene locations have been stored
$ 1635 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 40 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:04:45
-->
