<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:10:02"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584284" ref_strand="+" ref_description="SGN-U584284 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|90657630|gb|ABD96928.1| (e_value=7e-128) hypothetical; (*ATH) AT5G15640.1 (e_value=2e-128) | Symbol: None | mitochondrial substrate carrier family protein, contains Pfam profile: PF00153 mitochondrial carrier protein | chr5:5087374-5090043 FORWARD | Aliases: F14F8.20, F14F8_20; (*SWP) sp|Q8BGF9|S2544_MOUSE (e_value=2e-36) Solute carrier family 25 member 44 OS=Mus musculus GN=Slc25a44; ">
      <seq>ttccctcacaaaaggaataaacggatttaaaaagttggtaatagaatagaaggaggagaagcattatattgaccatttggtcggtgcttttcctccaagaaacttctccgattactctccatttgcaaaatttaacgacttgcttataagccgagttagggttttgaacagttgtaattttttttaatggaggttgctggatctacaaggaagccatttcaacaaaccgagattaactgggacaagcttgataagactaggttctatgtcgtaggagctgggatatttacagggcttactgttgcactataccccatttctgtcatcaagactagaatgcaggtggcaaccaataatgctgcaaaagagagtgcattttctgttgtcaggggcctagtgcgaaatgatggtattcccggtttatatagaggatttggaactgtcattacaggggcggttcctgccagaattatatttctcacagcactagagaccactaaggtgactgcatttaagatggtggaaccattcaagctatcagaacctgtacaggcagctatagcaaatggtgttgctggcatgctggcgtctctttgttcacaatccgtctttgttccaattgacatagttagtcaaaggttaatggtgcaaggatactcaggacatgcaagctacaatggaggcttggatgttgctcgcaaagttctgaagtcagaaggtatacgtggactatatagaggattcagtctgtctgttctaacatactccccatccagtgctgtatggtgggcaagttatggttcgagccagcgcttcatatggagcaagctcttggataatggaactgagcatggtgggcctgctcccagccaggggaaaatagtgtcagttcaagctgctggtgggatcatcgccggtgctactgcatcttgcataacaactccattggacaccattaaaactaggttgcaggtgatgggacacgataagagacctagtgcagggcaagtagttaagcagctaattgctgaggatggttggacaggattttacaggggattaggtccaagatttgtcagcatgtcagcgtggggaacctccatgatacttgcctatgaatatctcaagcgcttgtgtgcagtaaacgaatagattgatgaaagctagctgccagacgactcttgcggtaggatttttatactactgacatacagtatttgagagctggagataacaagaccgcggctgattagctgtctgtatacaaatgacactatgactgttatatgagttgacttggaatccaagtacctggccaaaatacaattaatttttcttagggatttcttacaatattcttaaatgatttttgccagataaatgccacattcattggttgtagtgagtcatgacaaggaggacccctgaataatttttggtagataataaatgttaaatgttatattccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="2972" stop="7741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3272" g_stop="3516" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4287" g_stop="4668" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="627" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.878" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5047" g_stop="5243" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="824" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="5418" g_stop="5565" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="825" r_stop="972" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6171" g_stop="6324" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="973" r_stop="1126" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="7097" g_stop="7442" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1127" r_stop="1472" r_length="346" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-U584284" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3272" e_stop="3516"/>
          <exon e_start="4287" e_stop="4668"/>
          <exon e_start="5047" e_stop="5243"/>
          <exon e_start="5418" e_stop="5565"/>
          <exon e_start="6171" e_stop="6324"/>
          <exon e_start="7097" e_stop="7442"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACACACAAAAGGAATAAACGGATTTAAAAAGTTGGTAATAGAATAGAAGGAGGAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAAGTAAGCTTTTATTTATTGGTAATTTTGATGTTTTTTCTTCCGAATCCTAATGATGGAATGATTATGTGTTTTAATTATGTAAAATGATGATGGGTGTTGCAAGTTGTTATTAATACGTGTTTGTATATGGAAATTGATATTCGTTTCCAATAATTTAGGGTTAAGAATATAATTAATTTCAAGATTGCGCCTGGGTTGGGTTGAAAATTAGCTGCAGAGAATCAACCATGAAATGCAAAGGTTTCCATTTGGGACGACTCATAGTATTCCATCTTAGAAAGTGATTTAGTTTAAAATGGGAGTTAATTGTGAGTGGCTATTGCGAAATTATTCAGGCTAAACCAGAGGGAGGGAGACTAGAATACTTTGTTTATACACAATCCTTTGTACTATAGAAGTGACTTGCCTGAGGCTTAAACTGTATTCAATATATATACTTATTTTACATATAGTTAGTAGACAAAAGGTTTACCAAGACGCTGAAAATATCAGCAGAATGGAGAGTTTTCAGGTTCTATCTCAGGTGGATTTCATGCCTCCAAAGTCTGTGACCTTTAACATAGATTTAAGTTTCTCTATCTTATAGGATAATTATTTAACTGTCAAGTAGGATCCGTTTGTGCTGCAGCTTAATCTTTTAATGATGTAGTGGCCTGAAGGGATAATTTCTTTGCTTGTATGGAGGGTTCCTTCTTTTTGTTTTATCTCTCTTTTTAAGTTTTTCTTTTTAAACTTCATGCTTCTCTTTATATCTTCCACCTTTGATGCAGGCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATAGTATGGCCTTTCTCTGCTCATTCTTTTTTTTAATAATAGTGGCATAATGACTTGGATAAGTGGACTGTGAATTGGACATATTTTATTCTCTAGAAATCCACTTATAGCTAGATTAACTATCTGATTTAATCTGGCGAATATTTCTTAAATTATCAGATTGCTCTTTGTTCTTTTTTGTCATTTACTCGAATTTGCATTAGAATACTACTATACTTGGCTGAATTGACCGTAGCAATGTGATTATTTAAGTTGTGTTCCAAAGGCTTATGCTCTTCCTTATTTTATTGTTACTACCCTACATCCTACTGCAACCAGCCACAATTTGTGGATGAGTTTTTTCAAGTTTTAAAATTAATTTCATGAAATTTGATGAAAAAGGTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAGGTTAGATGATAGTTCTGATCTTTCAAAATTCTTAAGAGTGGACTTTGTCCCTTTTTTCCCATTCACTTTCTTGTTATACCCTTGAATTGGGTTGCATTGTCAAGTATTGTTGTTCTACAGATTTCTATCGGGTAATCCTTTTGTGACTTTATCATTGCTTGTGTTGTCTATCAGCAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAGGTATTACTTTTGGTTTCTGTTATGAACTCTGTTGCTTGTATCTTTCTTCAAAATAGCTACTGCTTGTTCTGCATTTTACAAATTTTTCGTATTGTTTACGCTTGATTATTCATGTGCCCGTCTTGGATGCTTTTCTTTTTTCCTTGTATGTTTACTTGGATGGCTATTCCCCTCTTTCGTGTTCTATGAAGGCTTGTGCTGCTCGGACTCTTCAAAAATGCCGTTGTGTGCGTGTTGGGTCCTCCTAAAGTAGTGGATTTTTGGATGGTCCGGCAAGACTGCGGCAGCGTTTTAGAGAGTCCGAGCAACATACTACTTGCAACTATACTATGAACTTTGGTAGCTGCTCCTTCATAGATGGTTTAGGTGTTCATTTTGTTTTCTATGTGCAGATTGGTTGCGCATAATTGTGCATTAGTAGCTGCTTTTTTATCTGTATAGAATCTTTGATATTCTGTTTTCCTTTGGTGGTCAGATACATAACTGTGAGTGTTGACAAACAATTCCTATTAAAACTCTAGCCTAGTTTGTTGTCTTACATGTCGTGTAATTAGTCTCAGCTTCGAGTCTTGTTATTTAAGGACCTTCTTTTTCATGCATTACAGGTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCAGTAGGATCTTTAACCTCTTCTTCTCTTTCTTTTACTTTTAACTACTTCATGAGCAACATGTCATAATATTTGGAAGTCCCAAGTGTCATCTTTGAAACCTATCATGGTGCTGTTATTAATGTGTCCAATTGAATCAAACTGGTAGGTCTTCCACTTTATTTTAATCAGTAATCTTGGCTTCTTACGTGATTCTTTATCCAAGTTTATATGGGACCTTTGTATTCACAGTATTCTGATTTTGTGATTGATCTTGTTATGTCTCAAGTCGCTAGCTATCATAATGATTACATTTACCTATAAAAGTGAGGCTTTCCTGTTCTTAATATTTCGTTGCGAGTTTTATCAGAAGCAGTGACCAATCTGTTTACTTACAGATTCTGTTTTTATAAATCTGGTTAGTTACAAAGAGGTGTATGTCTGCCCTATTAGACTTCGCTTGATGCAAGCTGTTTTGCCTGAATCGGACATAGCAAACAATAAAATCCATTTGGTACTCAATTTGTGACAAATAACTTCAGCATATTCGTAAAGGAGATAAGCTCCACTGGTCTAGTTCTTGATTCTAGTAAAAAAGTAACTTCTACTGATGCTCGGTTTATGACAATATGATTTCCAATTAAAAAAGAGAAAGAGCTCTGTTGTTAAGTGTCATGCTTTCAGGTTAAGGAAGTAACTTAGATGGAATACGCTACTACTTTCACTATTTTCCTAACATGAAGATATGAAAGTTTCTTTAATAATTTTTCCTGAAACTTGATTTTTTTGTTGGCAGAGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGATAATAAATGTAAAATGTAATATTCATTCA</genome_strand>
        <mrna_strand>TTCCCTCACAAAAGGAATAAACGGATTTAAAAAGTTGGTAATAGAATAGAAGGAGGAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA..........................................................................................................................................................................................................................................................................................................................................................................................GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG..............................................................................................................................................................................CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCCTGAATAATTTTTGGTAGATAATAAATGTTAAATGTTATATTCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595697" ref_strand="+" ref_description="SGN-U595697 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gaatgaatattacattttacctttattatccaaccaaaattattcaagggtcccccttgtcctgaccccctacaaccaatgaatggggcctttatctggcaaaaatcatttaaaaatattgtaaaaaatccccaaaaaaaattaattgtattttggccaagtacttggattcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="7741" stop="6968"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7441" g_stop="7268" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U595697" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>174</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7441" e_stop="7268"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGAATATTACATTTTACATTTATTATCTAGCAAAAATTATTCAAGGGTCCTCCTTGTCATGACTCACTACAACCAATGAATGTGGCATTTATCTGGCAAAAATCATTTAAGAATATTGTAAGAAATCCCTAAGAAAAATTAATTGTATTTTGGCCAGGTACTTGGATTCCA</genome_strand>
        <mrna_strand>GAATGAATATTACATTTTACCTTTATTATCCAACCAAAATTATTCAAGGGTCCCCCTTGTCCTGACCCCCTACAACCAATGAATGGGGCCTTTATCTGGCAAAAATCATTTAAAAATATTGTAAAAAATCCCCAAAAAAAATTAATTGTATTTTGGCCAAGTACTTGGATTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562810" ref_strand="+" ref_description="SGN-U562810 Tomato 200607#2 [18 ESTs aligned] (*GB) gi|90657631|gb|ABD96929.1| (e_value=1e-64) hypothetical; (*ATH) AT3G02220.1 (e_value=7e-60) | Symbol: None | expressed protein | chr3:412090-413611 REVERSE | Aliases: F14P3.13, F14P3_13; (*SWP) sp|Q96MD7|CI085_HUMAN (e_value=2e-15) Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85; ">
      <seq>gacactgaagagagttcaaaaatcttttagaagagaaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgtattggcagctttggagaaaagtaatttattgggcaaaattgatacaggctgtttggtttgcctccccttctacagtaaaggactaagagtgagatcaacacactattccattccttttccatttcatattttcctagctagtgaagagttctgagagtgtaatatagagtaagatagattcttaagccattttttaatgtaattcagctaaaaagacagcctgctagttgcttcataatgtgatgtaggagcattgatgttttgttggtcaatttactcaaatagtaactggtctttggttttttggaactttatggcccatcaaattatctcaagaataaattggctggctgggcgtttgcaactcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11791" stop="7664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11491" g_stop="11367" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="247" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="300" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="364" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="407" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="455" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.092" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8643" g_stop="7964" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="1135" r_length="680" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U562810" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1135</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U562810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11491" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8643" e_stop="7964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACACTGAAGAGAGTTCAAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTCC</genome_strand>
        <mrna_strand>GACACTGAAGAGAGTTCAAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588157" ref_strand="+" ref_description="SGN-U588157 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|90657631|gb|ABD96929.1| (e_value=8e-62) hypothetical; (*ATH) AT3G02220.1 (e_value=2e-57) | Symbol: None | expressed protein | chr3:412090-413611 REVERSE | Aliases: F14P3.13, F14P3_13; (*SWP) sp|Q96MD7|CI085_HUMAN (e_value=2e-15) Uncharacterized protein C9orf85 OS=Homo sapiens GN=C9orf85; ">
      <seq>agagaaaaagatgagcggcgtaaggaaagggccgccgaagcatcagaacaaagtcgcctggaaacctaacgccggtatcaaaatcaatgaaacggaagtgggtggaaaatttaggcctctctcagaaataacaggagtatgtcttcgttgtagagatcaaattgattggaagcgcaagtatggaaaatacaaagccattactgaacctgctaagtgtcagaagtgttcgaaaagaaacgtgcgtcaagcttaccacaatctctgcaatggctgtgcaaaggagcataaagtatgtgccaagtgttcatgtcgtgttggtcaagtggttggaagagatgtttcagaagtagaggctgagaaaaaagctcttgaggaggctatcaagaatgctcgagaacgggataggcggtcacttctacgagctgatgtttctgagattcttagcgtgcatcttatgtctatgcaacagatgaacaaagggaagtcacagagttcagagaaaaacctaagtcaagatgacatgaaagttggtgaactgaatacagcatcatcacttgaggaatatgctaaggtaaaccgtgatgatgacgaagatggtgaactgaatacagcatcatcacttgaggaatatgccaaggtaaaccgcgatgatgacgaagatgatgatgatgaagaagatgaaggtcaagttatttgagatgcacaatttggagaataaccatatggccctttatagatctcccttcatggtccatagtttgatgcacactagctcatttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="11760" stop="8031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11460" g_stop="11367" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11282" g_stop="11161" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="216" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10934" g_stop="10882" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="269" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="10643" g_stop="10580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="333" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127">
            <donor d_prob="0.871" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="10452" g_stop="10410" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="376" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="10311" g_stop="10264" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="424" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="10263" i_stop="8689" i_length="1575">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8688" g_stop="8331" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="782" r_length="358" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U588157" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11460" e_stop="11367"/>
          <exon e_start="11282" e_stop="11161"/>
          <exon e_start="10934" e_stop="10882"/>
          <exon e_start="10643" e_stop="10580"/>
          <exon e_start="10452" e_stop="10410"/>
          <exon e_start="10311" e_stop="10264"/>
          <exon e_start="8688" e_stop="8331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACGGTACGTCTACTTTCATTCTCCGGCGACCAACCGCTATTTTTGTGGTCTGAACGAATTGATTGTTGGTGTTGCTTTTATTTGCAGGAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTGGTAAACTTCTACTTCTCTATTTTTGGTTGAATTGGTGGTTATCAACATTTTTATCAGTTTGTTTTAAGGATAATCTGTAGAAGATAAAAATGTTCGAGGTTAGCGAAACGCATATATAGCTGGTTAAAATTTCTACAGTACATAGTTATACTATCTTCATTGAAATTAGTGAACCACGGTACACTGACAAATGCTCCTGTTTTTTTTTCCCTCATAATTCTGATAGTCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATGGTTAGTTTTGACTTCTTTTGCATATGATTTATTTTATTTTATATGTATTTGTTACAGTATAGTGAAATAATATGATATGAACTTAAATGGTGAAATGAGGATTCATATAGCCGCCCCCAACTTATTTTGGGATTGAGGCGAAGTTGTTTTTGTTACAACATGATGAAATCCCTCAATGCCTTGTTGAAATCTGTGTAGTTTTGGTTTAATGTTTTTGCATTTATTTGTAAAATCACAGGCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAGGTTTAAAGATTCTTCCTTTTCCCCCTTCCCTTCTCGATTTATTAAATCTCTATTTTTGCTAAAAATTAAATGATGAAAATTGTTTGTGGAAGACATCTCATGTGCTTTATTTTATGTTTTCTCATAGAGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAGGTTTGTTCTCATAGTCTTATTGTTAGCTTTTCTGTCATCTATATGATCAGCGGGTCATTTGTCAACCTATGAATCTAATGTGCTATTGTTGGTTACAGGCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCTGTAAGAGAATTTTCTGCTGAATTAACTTTATGATAAATGTTGTATGGGAAGCCTGTCTTGTCCTTGTTCCCAGCTAGCCCCCAACCCCAATCTCAACCCGCAATGGCAATTACTATTCAATAAGAAAATATTTATGATTAGATAGAAAAACCAAAATTCATGCTCTGTGTGTTAGACAAACAATTATCAGTTGTTCTAGTTACTACACTAGCTCAGTTGTCTGTTTTTCTTTTTTCTTAATAACAATGGTGCTTGAGCAACTTGTGTGCACATGGGCTATCATTAGTTTGGTACATTCTACATATGTTTAGTTCAACACCACAAGATCCTCCTTTCTTATACTCCGTACCAAGTCAAAACCAGTTAAACAAACTGAAAGGAGAAGGTGAAATACAACTTTAACATGTAATCCTCACAAATGCCCTTCTCTCAAATATTTTATGTCAGATGAAAGACAACTTTAACATGTTAATTGTGCGTAACCTTGTTCTTGCAAATACAAATGATGTAGGTGACAGTTAATGGTCATTTTCATTCTTATCTCTTTTGGATCTACCCGATTCTCTTCTATTTGTTTCTCCTGGAGTGGATTGAAAATAGTTGGAGGAGTGTTAGTGCATTTATAGTCTGTACGCATAAGCATATTTTTGTTCTCTGGATGTTAGATTGCCTGCTTATGTGTATATATGGAGTAGTAGTTATGCTTGAAATTGGTTTTTAAAGCTGAACACAATGTTTTCTGATTAAGTAAGATGTTCTCTTAGCATCAAGAAGATGCAAAAAGTAAAAATGATGGGATGTTAGCTCCTAATACACAGCATTTTTATACTACACACTGGAATCTAACTGAAAAATGAAAAATGGTAGTTTAGCCAGGCACAGTTAGCCAATGAAGTCTAGAAAGAGAATAACATAATTTCAATAGAGATTACTCCAACTAAAAAGTATCAGCAGACATCTAGCTTTCAAGGGTATATAGGAGCTGAAATACCATCAAAACATCTGAAGTTCCTGTAAAAATACACCAGAATATGCTAGCTGGGAGAATTGTCCTGATGCTCTTGATGGCCCTTTTGACTGTCCAAAAGCGCTAATATTCAACTGCTTCCTTGATACTCTGAGGTAGTATCCAACTGATCCCAATAATTGAAGAGAACATGCGGCAGACACCAGTAGTCACTGTGCAGAATGTTTTCCTGCTGGCTACTTTTAATTGCATAATACCCATTAAAGAGTACGTCTGCATGAGCCATGAAATGGATTTTGAGAAGTGAATTCTATATGTAACGATTGGTTGGTTCGATGAATGGTAGAGGGACAGTTGATTTACTTTTCACGTACTCATGTTTATTTACTATCTAATTGTACCATTTGATAGTATAAGCCCACATGACATCCTCCTCTTTTTTTTCTTTTTTCTTTTTAAAGTTCTCATCTTCTTTATGTATTACCAAGGTTGTAAATACTCATTCATTTCCCCTTTACCATTTGTGATTTCTACTGTGCTATAAAAGTATCTTGCTTTGCTGGAGTTCCATCACATTGGCGTCTGTTGCCTTACTATGTTGCTTTCAGGATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTA</genome_strand>
        <mrna_strand>AGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG....................................................................................GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG..................................................................................................................................................................................................................................TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG..............................................................................................................................................................................................................................................GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG...............................................................................................................................AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG..................................................................................................GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575805" ref_strand="+" ref_description="SGN-U575805 Tomato 200607#2 [19 ESTs aligned] (*GB) gi|157341275|emb|CAO49182.1| (e_value=2e-137) unnamed; (*ATH) AT3G51550.1 (e_value=3e-134) | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr3:19128563-19131840 REVERSE | Aliases: F26O13.190; (*SWP) sp|Q9LX66|Y3290_ARATH (e_value=4e-112) Probable receptor-like protein kinase At3g46290 OS=Arabidopsis thaliana GN=At3g46290; ">
      <seq>ctaacccagattctgcatatcaaaatgctatcttaaatggattagaaattttcaagttgaacgactccaatggaaacctctccgtgccgaatcctgaagttttctttccgaataattcaccaccaaacaacaataagaaaaagaaatcatcacacatcattgctgttatcactgcagtggctgttattagcggaattgctctgttttcaattctctgtttcttgattttccggcggtggagaaggggaaaagatcttcatacaagcgttacaaagtcatcatggatccctttgtcaattacatcggactcaacccaaaggacaggcggctcacgctcatcatcactaccatccgatctgtgccgacactttttactagaagagataaaaactgcaacaggcaattttgatgaaaaatttgtgattggttatggaggttttggtaatgtgtacaaagggtacatagacaacggtgcaaccatagttgcagtcaagaggttgaatccttcatcaaagcaaggagtccgcgagttcgaaacagagattcacatgctgtcaaagctaaggcatgtgcatctggtgtccttaattggttattgtgatgataagaatgagatgatcttggtttatgattacatggctaatggaactcttcgtgatcacttgtacaaaactgataatgctccacttccatggaagaaacgcctcgagatttgcattggcgcagcaaaaggattgcattatctccatacaggtaaaaaggatatcatcattcatcgagatgtgaagtcaaccaacattttattggatgataaatgggttgctaaggtttcagattttgggttatccaaaatcggtccacttagtggatcaggaaaaactcatgttagcactgttgtgaaaggaagctttggatatctagatcctgaatactataagcgacaacagttgacagaaaaatctgatgtgtattcttttggggtagtgctattcgaagtgttgtgtgctagaccagcattaattcctaacatgccgaaagggcaagtgaatttggctgattgggcttgtaggagctgtaaaaaaggaaatcttcaacaaataattgatccaaatttggaaggacaaatcgcgccagagtgcttaaacaagtttgcagaagcagcatacaattgcttgaaggatcaaggagtccaaaggccatcaatgaatgacgttgtttggaatttggaatttatattaaagcttcaagaagcagctgataatagaggtcacaaaatggaattgaacagttatccgactagcccgtctttcccattgattatgaatgatcataccaatatatctacagatgaaggattcgaggaattttcaggttcaaatgaagttggagaaaaatacacaagcagtgcttcatccatgaccacaactagtgatgacaaattgaagagtgaaaccattttctctgagattttgaatccatcgggacgatgagattgttacaactagtatgataaatattacatattagttcttctctgtttcctttttcgtctgttgaatttatgtccttattatatgtggatgatgaactgaagccattattcagaagtatataagctataaaatactttcattatattttgttgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="16413" stop="14016"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16113" g_stop="15361" g_length="753"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="753" r_length="753" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15211" g_stop="14316" g_length="896"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="1649" r_length="896" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U575805" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16113" e_stop="15361"/>
          <exon e_start="15211" e_stop="14316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAGGTATACGGTTAATCTCACTCTGATATCACGTTGAAGTGTGTATAGAATAAATTTTTAGTAATTTACTGATAGAAAAAGATAAAGATTAATTATTTAAACATAATAATTGTTAACTATAGTAGATATGATGGTTAAATTTAATTTCCCAGGTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATATTTTGTTGAGTG</genome_strand>
        <mrna_strand>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG.....................................................................................................................................................GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATATTTTGTTGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566101" ref_strand="+" ref_description="SGN-U566101 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|157341279|emb|CAO49186.1| (e_value=5e-51) unnamed; (*ATH) AT3G51550.1 (e_value=6e-48) | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr3:19128563-19131840 REVERSE | Aliases: F26O13.190; (*SWP) sp|Q9LX66|Y3290_ARATH (e_value=4e-19) Probable receptor-like protein kinase At3g46290 OS=Arabidopsis thaliana GN=At3g46290; ">
      <seq>ggttgtgtataattaattgttccttggaacagctaatatctccttacaccaactccccatggcaaccatcactttacttttctttctcttcttacaactcataaccgccactattgctaccacgtcgccaccgtataacgccacagtcttcgtcttgcttaactgtggcgcacaatcagccatcaccgatgatactggccgtcgatgggatactgatactcactttccaaatttcttaccttccgacttttcaagcatatccacaacagccacagctcttgaacaagatccttctgtcaatagaattccttatacgactggtattcgtattatgagatctcaattcacctatactttccgtgttacccctggcacaatattcctccgtctctatttctaccctgccaattactccggttttaacaaagctgattcttttttctccgtcacagctaataatttaaccctcttgagtaacttcagtgctttcttcacagtctctgcaagtagtactaaagctgttcaaaaagaatatgtcatcaatgttgatgaaacacagatgctcaaattaaccttttctccttcaccaaactcttatgcttttgttaatgggattgagatactttctatgccaactgatctttacatccatggagacgtcaaattgactgggaatactattccatataacatcaataatagcactgctcttgaaacattgtacaggctgaacgtgggaggcaatttagttgaaagcacagaggatacagggatgtatcgtgtatgggattcagataatgcatttgttgttggattaggctatcaaactcctcattttcctgatgccaacatcacttacacttctgaaaccccgaattatactgcgccaaccatagtttacacaacctcgaggattatggaacattaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="17591" stop="16063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17291" g_stop="16363" g_length="929"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="929" r_length="929" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U566101" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>929</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17291" e_stop="16363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGTGTATAATTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACACAACCTCGAGGATTATGGACAATTACA</genome_strand>
        <mrna_strand>GGTTGTGTATAATTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACACAACCTCGAGGATTATGGAACATTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602810" ref_strand="+" ref_description="SGN-U602810 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>attgccccgccgcgttcaaagatagacgctcctttttagcattaccagcaagaatcatagtgcttgtatgtgattccatcaagaattcatcaacatcatctggtgctatgttgctctttgtcccattacattctaatgctccaattacttgttgcacctttattatggtgacaactagtacaattaggagcatcttcttgtaacattttctttccatgcttaatattagtatattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="23769" stop="24604"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24067" g_stop="24304" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-U602810" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24067" e_stop="24304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCCCCCGCCGCGTTCAAAGATAGACGCTCCTTTTTAGCATTACCAGCAAGAATCATAGTGCTTGTATGTGATTCCATCAAGAATTCATCAACATCATCTGGTGCTATGTTGCTCTTTGTCCCATTACATTCTAATGCTCCAATTACTTGTTGCACCTTTATTATGGTGACAACTAGTACAATTAGGAGCATCTTCTTGTAACATTTTCTTTCCATGCTTAATATTAGTATATTGGA</genome_strand>
        <mrna_strand>ATTGCCCCGCCGCGTTCAAAGATAGACGCTCCTTTTTAGCATTACCAGCAAGAATCATAGTGCTTGTATGTGATTCCATCAAGAATTCATCAACATCATCTGGTGCTATGTTGCTCTTTGTCCCATTACATTCTAATGCTCCAATTACTTGTTGCACCTTTATTATGGTGACAACTAGTACAATTAGGAGCATCTTCTTGTAACATTTTCTTTCCATGCTTAATATTAGTATATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584343" ref_strand="+" ref_description="SGN-U584343 Tomato 200607#2 [48 ESTs aligned] (*GB) gi|78191456|gb|ABB29949.1| (e_value=0) unknown [Solanum tuberosum]; (*ATH) AT5G15610.2 (e_value=2e-154) | Symbol: None | proteasome family protein, contains Pfam domain, PF01399: PCI domain | chr5:5079516-5082208 FORWARD | Aliases: None; (*SWP) sp|Q54KZ8|EIF3M_DICDI (e_value=6e-57) Probable eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum GN=eif3m; ">
      <seq>cgattacccttggtcttattggcgactctccaactttacccctatctagggttttttcttctctcccgactaagagagttctccgctgcgctgcttgctgttcacactctctatctcttgggaaatttcgcgggcgaggaaaatgacgactgtggttcctacttctgaggaagatcccgtcctctccgtcgtccggtttacggcagagatgtcatgggcggacgccggcgccgagactgcagagcctgaagttaatagattgtgtgtcgaggcccagaaatgcatgattgaaggaaggtggttggatttggtttcgcttatgctcgcttctgcagatataatattttctaaagcttctgaaaaagatcttgagtgcgttttcacaataatgtgcaaccttgtcaagaagcctgagagcttggaccaagtacatgagatggcagagctcatatccgctaaaatcattcaacaacccaatgataaacccgcattgcgcttgaaaatcttgttcaatctctacaatctgttggagaacccatacagccgtttctgcgtttacttgaagtccctcaagttggccactgccgggaaggttactgaacacattttgtcgtccatcaaaatgatggataacttcttgaaggagtggaatcttggagtcaaagatcagagagagctgtttcttgcaatctccaacattttaaaggaaagcaaaggctctacaaaagattctttcatgtttcttacaaagtatctggaaaccttttcgtctgaagatgcttctaatatgactgaggctaaggaagaagctgccagtgcaattgtcgattttgtcagatcacctgatatgtttaagtgtgacttgctagatatgccggctatagtccagttggagaaagatggtcaatatggtccagtatatcaacttctgaagatctttctcactcagaggctggatgcttacttggaatttgaggcagcaaattcagcattattaaaaacctatggacttgtccatgatgactgtatatcaaagatgaggttgatgtcgttggtagatcttggcttgaatgaatctagtcaaattccttattctgtcatcaaacaggcattgcagattgatgacattgaggtagaatcgtgggttgttaaggcaattacagctaagttacttgattgcaagattgatcaaatgaatcaagtagtaatagtgagccgatgtacggagcgtgtgtttggtgtgcatcagtggcaagatctccgcacgaaactagtgacttggaggggcaacattgctggtgttatcagcacagttcaagccaataagattacagaagatagcacacaggcagtgcaaggtttagcaatccgctgagtgttctttgtggaaatctctttttaattttagagatcggatttaattgggatatactgttcacatctttttcagcttgaaattttgatcatcttttttttttttgggcaaaaatataccatttgttaaattacagtagccatttttattttgtccgtcgaggtttcgggctgtatttcaatttgacgactgtctttgctttgtacttttaagttgactccagtatttggaaataggttatgttgccccccaaattcacttgttaggatatcataccagaaggaattccttgcgggctggaacaattcactcttaatgaattccagttcagatcaggtgttatgattcgacgcaaatgtcaacttttggtcctgtttggccatgcgattggtatcatgacgagaaatcgtaatatctacagtaagttgtaaaattattagaataatatcaattttttattttttagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="31137" stop="24864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30838" g_stop="30604" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28455" g_stop="28326" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="365" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28102" g_stop="27964" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="504" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27882" g_stop="27670" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="717" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.524" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27590" g_stop="27452" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="856" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26902" g_stop="26752" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="857" r_stop="1007" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79">
            <donor d_prob="0.187" d_score="1.00"/>
            <acceptor a_prob="0.729" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="26672" g_stop="26563" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1008" r_stop="1117" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="26486" g_stop="26389" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1118" r_stop="1215" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115">
            <donor d_prob="0.021" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26273" g_stop="26204" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1216" r_stop="1285" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="25976" g_stop="25520" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1286" r_stop="1743" r_length="458" r_score="0.996"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="25519" i_stop="25264" i_length="256">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="25263" g_stop="25164" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1744" r_stop="1843" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U584343" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1842</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30838" e_stop="30604"/>
          <exon e_start="28455" e_stop="28326"/>
          <exon e_start="28102" e_stop="27964"/>
          <exon e_start="27882" e_stop="27670"/>
          <exon e_start="27590" e_stop="27452"/>
          <exon e_start="26902" e_stop="26752"/>
          <exon e_start="26672" e_stop="26563"/>
          <exon e_start="26486" e_stop="26389"/>
          <exon e_start="26273" e_stop="26204"/>
          <exon e_start="25976" e_stop="25520"/>
          <exon e_start="25263" e_stop="25164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTACCCTTGGTCTTATTGGCGACTCTCCAACTTTACCCCTATCTAGGGTTTTTTCTTCTCTCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAGGTAATCTATAGCCAGTTTCTTTCACCTTTCTGTTATCGTATTTGTTGTTCACTGAAGTAGCACTGTTCTTATACATGAATTTACGATACGCTCTCAAAAGTTTGATATCTTCTTGTATATACTGTTCGAGTTTACTCTTAAAGAATATTGACTCGGCTTTTGTAGTTTTGTCAATCCGATGGATTGACTTTGGTATCAGTTTATTTAAGAAATAGAATGGAATGGACTAGAAAAGAGGTGAATGGATAGAGTATTCGTAGAGCAAAGCAGGAGTAATTTGGGGATGAAGTAGAAGTTCATCTATTATTCTCCCAACAAATTATGTGGATTGGATATATAGGACTCGTAAAATTTTATTGAGGAGTATACATGGATATAAAATTTGATTGTCCATATGCGGAACTTCTCAATCGACCAAACAGTATATGGAATGGCTGCAGAGGATGCATAAGAAATCATATATGCTCTGATTTATGATTAGGATGCCTAATGTCTAACTTTGTTTTATTAGAAAGAATATAAAGTTAGAATCTGTTTGATATATTGTTTATAATTTGTCTTTCGAGCTTTGCGCTAGTGTTGATAAATAAGATCTTAAAGAACACTTCTACCTCTCACTGAGAAAAATTAGAGGTTATTTTTGTTTGGGTCTGTGATGAATAGGTTCAAGAGATGAGAGAATTATGACTACCCACTAGAAAGACTAATCCGATTCATAAGAATGTACCAGAAAATACAACAATCGAGTTGGTGTATTGATCCAGATAGAGGGGCAAAAACATGAATTGAACTTGTAATATTTTATGGAGGTGTCCATCCCCCTCCCTCCCCCGCAAGAAACAAGAAAAATAAATCCCAAGGATATGTTATTTGTTTTAGTTTGATTTGTTGTCACTTATGAAATAACGGACTGCATAAATTTAGTGGTTTAGTTTCTTTGATTCCTTCCCCATTTGTGGATTACACCGGGCATGTTTTTGTTGTTTGTAGTTTCTTTGCATTCCAAACCTGCTCTTCTTCTAGGATTTATGCCAGTATACTTTTGCCAGATATTTTTGTCCCTATTAGAGATTCGATACAATGTAGATTTTGAACTGTTGTAGTGGCTCATGGTTGTCAAAGAAACTTCTTACTTGCTGAATATTAGGGGTTACCATATGTAATGTTACACCCCTCTTCATTTTGCCAGCAGTTTTGTGCTCTGCTGTTCTCCAATATCACATGCTTATCTTGAGTCTAAGCTCATGTTTTTCTTCCATCTCATTGGAGTTCTTCGAAAATCGTACAAGAGAAACCATACTTAAAAAAAGTCGCAATATGTCCTCTACTCTACTAAATATAGTTGGAAGACTCCTACGTAATTCAGCTCCCAGGGCTTTGGTCTAGTGGTAAAAGCACATACGTGATTTGTTGGTTAGGCGCGCATGCCAAGTGTTTGAATCTAGTCGCAAACAAAAGCATGGTACGTAAGTGGAGAAGAAACTTGCAAGACCTCTTTGAATGGAAAGACCGCTAGTCTTGCTGAATAACAATTACGTAAAGAGGAGTTATTTGTAAATGATACTCCCTCAGTTTCAAAAAAGAATGAACTATTTTCCTTTTTAGTCCGTTTAAAAAAGAATGACTCCTTTCCTTCTTTGCAACACTTTAATTTCAGCTTTCCACCTACTTTGCATGTTTAAGGCCACAAGATAAAAGGACATTTTGGTATATATGATATAGCTTTTATGTAGGACCACAAGATTGAAAAGTCAACCTCAATTTCTTAAACTCCGTCTCAAGTCAAATTAGACCACTCTATTTGAAACGGAGGGACTAGTGTTTAAAAAACCCAAAAGAAATCCTCAAAGTCCATCCAAAATCATTATAGCATCACGTGAAGCTACCTATGGCAACAACGACCCAAGCTGATGCCAAATGCAGAGTCATGGTTATGCACTTATGCTTTGTACAATCTCTGTTGATTGTAGTCAAACTACTGCTTATTTTGTTGGTGCATTGTGTTAAAATATCGGAGAGAAAGAAACATGGAAACTCATCTGTTTCAGTAAGTGCCATATGGAATACTATACAAACAGATTGGTGAAAGATTGTTTGATTGGACCTTTAGGTCGTTGTACAAGTTCTAAATTGGTGATCCATTTATAGACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAGGTAAAACTACATTTCTGCCATTCCAATGAACTGCTGATAATGATAGGTCCTGGCCTTTTCCATTCTGGGGGGCTTTTCTTTTTTCATCCATATAAAAGCAATTATTTGATTGTCTGAGCCAGTTGTTGTCAATTGTCGTCTTATGTTTCTTTTCCCAGTTTCTGTTTCTCCCTTCTTCTTTTTTGCTTTTGTGATTAACCGAATGTGCTTTTTTTCTGCTCAGATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAATGTATCTCACTTTGTATTAATCACTTTGATTCCCTCAAATTTTTTCTGTGGTCTGATTACATTTTTTCTCATCTATTTTCAGCTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGGGTAAGATGGGAGTGACTTCTTTTTTGGACTATTTATGCTTATGATGGTGGCTTTTTCTCATACTCGTGCATATTTGCAGCTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAGGTATTTCTATATTAAAGTGCTCTCTCACTGCAAACAACTGGAGAAAAGGTTTTGACTTGCTCTTAAGTTACACAAACAACTCAGATAGACTTATCCAAAAATAAACACACAAAAGAAAAGCTGTCCACAGTAATTTAATCCATCAAGGCTCCTTAATGTGAATAGAAGTCTGACATCTGATCCTATTGTTTAGATCAGTGAAAGGCTTGTCAAATAACTGATCCGATAGTTATTTTAAAATCTCAATTTTCCAAGCTTTCTCGCTGATATTTGATGCAATGGGTGTTCTGTGGTATCACCACTCCACGCATCACAGCTAACCAGAGTGCTTGACAATATAAACCTGAATGATGTGACTAGTATATTACAATGTTAAATTTTTTTGACTTTTCTGGATGGAGCTGTTTGAATTTGCTATTGCTTGGCTGCCACTACTGTAGAGTAGACCACTATATGATCAGAATGAAGACCTATCAGAAAAGAATTGAAGTTTTTGTTCTTTTGCATTCTTGTGTTCCATAGTTGATTTGTGTCGTTCCAATATGGCAGTGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATGGTAATGTACTTACCTTTGTACTGATCAAGCCATCAATTTAGAAGGGGCTATGGCCTGAAACTTTTGATTGATGTCGTAGGACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAGGTACACTTCTTGTATTATTTTGTTTGTTGATGTTTCTGCTCTGCATGTAGCTCATTTGGTCTTTTGCTCTTTTCAGATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAGGTGTGCTCTCTATAGTCAGCCTTCCTTTACTGTCTCTTCTGTCAGCTGGAGATTTCTTTTAATTTTCTTTCTTGTGATTAGTTGTTGCATTAATTGTTTGGTTGTCATTGTGTAGCCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGGGTAAATAATTAATTTTCTACCTAGCTCTAACAGTAATCAATCTGGTTTAGGCTGGGCTAATAGAGATGTTACATCCCCACCCTTCCCTCTCAGATGCGTCCAAAGCATGCTCCTATATTTCTTCTGCCCAAAATACGAACACAAATTTTCAGATGCTCATCATTTTCATTCTTATTTGCAATGGGTCGTATGCTTGTATGATTTTGAGTATTGTCTACTCTTTACAGGGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATC-TTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGTTATGATTCGACGCAAATGTCAACTTTTGGTGAGTCTTAAATTCGTTTCATCATTATCTTGCAACATCAATTGTGCAACTCATTACAATTTGTTGTTTGATATAAAAGCTGTATTCAAGTTGATGATAAATTTTGTTAATAGCGTCAATCTGATGCATAAAAGTGTGTTTTGCATGTGAAATTGTACATGTGGTCAAAAGTGACTGAGGTGGCGGGTTTGTGATTTAGTCAGTTGGTCAATTTAGGTATATTTACACAATCTTAAATGGTTTAAATATTTTTTAGGTCCTGTTTGGCCATGCGATTGGTATCATGACGAGAAATCGTAATATCTACAGTAAGTTGTAAAATTATTAGAATAATATCAATTTTTTATTTTTTAGTC</genome_strand>
        <mrna_strand>CGATTACCCTTGGTCTTATTGGCGACTCTCCAACTTTACCCCTATCTAGGGTTTTTTCTTCTCTCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG...............................................................................................................................................................................................................................ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT.................................................................................CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG...............................................................................CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG...............................................................................GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG............................................................................ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG...................................................................................................................CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG...................................................................................................................................................................................................................................GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGTTATGATTCGACGCAAATGTCAACTTTTG................................................................................................................................................................................................................................................................GTCCTGTTTGGCCATGCGATTGGTATCATGACGAGAAATCGTAATATCTACAGTAAGTTGTAAAATTATTAGAATAATATCAATTTTTTATTTTTTAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569748" ref_strand="+" ref_description="SGN-U569748 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>aaagaaaaagtgtgtttttaactcgcatgatacagaaataatgggtaatacagcattcagcacttacatagcagtttgaatccagtgtcaattagacactattacaattgtgaaaagaagtttcaaatttgcagtaaacgaaatccattcatactttcaacataactgggaaagcaaacttttgaaacttgatgtccagtgacatcacttgctggccttgagacaggctcattagtcggagccttttcctggttgcgagcagtctgagaattgttagcaggctctccacttccaaacaggtagcccaaggaactctgaccgcccccagcactcactccacggcccatccttaaccaagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="34889" stop="36570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35189" g_stop="35399" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35400" i_stop="36125" i_length="726">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36126" g_stop="36274" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="360" r_length="149" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-U569748" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>360</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35189" e_stop="35399"/>
          <exon e_start="36126" e_stop="36274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAAAAGTGTGTTTTTAACTCGCATGATACAGAAATAATGGGTAATACAGCATTCAGCACTTACATAGCAGTTTGAATCCAGTGTCAATTAGACACTATTACAATTGTGAAAAGAAGTTTCAAATTTGCAGTAAACGAAATCCATTCATACTTTCAACATAACTGGGAAAGCAAACTTTTGAAACTTGATGTCCAGTGACATCACTTGCTGCTGCCGTCACCAAATAAATAACCCAAGGAAGATCCACCACCAGGTGCTGCTTGGACCTTGGTTGAACGCCTTTCCTGCAATTATTCCAGGACAAAGATTGGTATCACTTAACTCTTTAAGCAAGCCAAAAAGGTGCTGATATTTATAATATTCTTCCATTGGAAGAAAATCAAAGCCTCAACGCAAACTGGTCATGCCTATTGAGGCATACGAAGTTACGAGGTTTGAGAAGTTGAGTATTATGATCTCAAAACAAGAGTTCTGTTAGGAAAGAAAGGAACCAATGATAGAAGAATGGTTTCAAAATTAAGAAAGGCCGTGTGTGTGTTTAGTATAGCAGATTGTAGAATATATAATTAAGTAAATGAATGTGTGATCTCTTTTAACAACTTGAGCTTTTTGATATCCAATAAAATACCAAAGCAGCAAAAAGAGAACCTGGGCATTCAATTCTCGCGGTAACCCATTGTCAAATAAGATATTCATGTGTTTAAGCTTTTAGATGAAATGATTACGCAAATCAACATAATACAAGTTTGCAAACCTTAAAAGCACTCCAAAGTTCAAAAGAATGGCAGCAGGAATCATAACAAGTTGCTAGCTAACATACCGTTAGAAAGTTGCCGCAGTTCTGGCCATCAGCACGAAAATAGTTGTTTGTGTTGTTACTGTGAATGCCTGCTGGTACATTCTTGGTGTTATCCACAGGTTGTGCAGCAGCAGCTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCGCGGCCCATCCTTAACGATTAA</genome_strand>
        <mrna_strand>AAAGAAAAAGTGTGTTTTTAACTCGCATGATACAGAAATAATGGGTAATACAGCATTCAGCACTTACATAGCAGTTTGAATCCAGTGTCAATTAGACACTATTACAATTGTGAAAAGAAGTTTCAAATTTGCAGTAAACGAAATCCATTCATACTTTCAACATAACTGGGAAAGCAAACTTTTGAAACTTGATGTCCAGTGACATCACTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCACGGCCCATCCTTAACCAAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585924" ref_strand="+" ref_description="SGN-U585924 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157341256|emb|CAO49163.1| (e_value=1e-138) unnamed; (*ATH) AT3G29770.1 (e_value=7e-129)  Symbol: None | hydrolase, alpha/beta fold family protein, similar to SP:Q40708 PIR7A protein {Oryza sativa}, polyneuridine aldehyde esterase (Rauvolfia serpentina) GI:6651393; contains Pfam profile: PF00561 alpha/beta hydrolase fold | chr3:11650820-... ; (*SWP) sp|Q9FVW3|Y1399_ARATH (e_value=7e-78) Putative esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990; ">
      <seq>gtggcattgctaaccatcttcatctctctcaactctcaactgctttgggaaagcatcaaatacttgtacgtatacgtaattcttattgtacatatctctgtaaatctgttgcatgtgaatatcaatcaatcagaaatgggcatgtgtttatcacggagttccggccccgtgaagaagcggcaatccaaacgtttaacgaatcaatcggcggccgccgttaatggcggtgggagcaacaggtggtctaagaatcgatcgtctaagagagacgattccatcattcaggagcgagctctcgccgccgcgattctcctacagcagcaaatgcaaaacggcggaggaggtggtgctgctccttttgatcgttcagcttcgcttcggtatccgaattcgaattctaagaagaatcaacctctaccgcgttcctcaagctctagggctcgctctcttactgatcctcttcttcagcctcaccagcttgtgaaccaggaagtgaaggttgatgatttagagacgaaccatttcgtcctcgttcatggtggtggatttggggcctggtgttggtataaaaccattgcacttttagaagaagctggatttaaagttactgcagttgatttaaccggttcaggcattcattctttcgacacaaatagcatcgcaagcctatcgcaatatgtacagccgctcactgattttcttgagaagcttgctgatggagaaaaggtgattttggtgggacatgattttggcggtgcctgtatatcctttgcgatggagcgccatccccttaaggtttcgaaagctgtgtttgttgctgctgcaatgctcactagtggacaaagtgcccttgatatgttctcacaaaagacagattcaaatgaccttatgagacagtctcaaatatttatttatgccaatgggaacgacaagcctccaactgctattgatttggacaagtcactcctcagggacttgttattcaaccatagtcctgctaaggatgttgcattagcatctgtgtcaatgaggccaattcccttttccccagttttggagaagctttgtctatccgactccaagtatggttgtgttaggcggttttatgtagaaacgacagaagataatgcgataccaaaagccttacagcagaatctaattagcaataatcctccagaacaagtttttcatctcaagggtgctgatcactcgccttttttctccaagcctcaaggtctacataggatactggtagagatctccaggattccataaacttggaagttgttttgctgaattccttattattagaaaagtcacaccgacacaaatgtagcaaagttattgttgtgtaaattaaccatgtggaatgcctattggtgtacatgttcggtttatccaattactttgttccatttgctatacttgagacagtgagaaattcccttactcgggaaaaagaatgctttaagaattgaatgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="47087" stop="41144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46787" g_stop="46299" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46298" i_stop="44844" i_length="1455">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44843" g_stop="44607" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="726" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44606" i_stop="43773" i_length="834">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43772" g_stop="43629" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="727" r_stop="870" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43628" i_stop="42658" i_length="971">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.649" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42657" g_stop="42526" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="871" r_stop="1002" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="42525" i_stop="41925" i_length="601">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41924" g_stop="41444" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1003" r_stop="1483" r_length="481" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U585924" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46787" e_stop="46299"/>
          <exon e_start="44843" e_stop="44607"/>
          <exon e_start="43772" e_stop="43629"/>
          <exon e_start="42657" e_stop="42526"/>
          <exon e_start="41924" e_stop="41444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAGGAATCGATCGTCTAAGAGAGACGATTCCATCATTCAGGAGCGAGCTCTCGCCGCCGCGATTCTCCTACAGCAGCAAATGCAAAACGGCGGAGGAGGTGGTGCTGCTCCTTTTGATCGTTCAGCTTCGCTTCGGTATCCGAATTCGAATTCTAAGAAGAATCAACCTCTACCGCGTTCCTCAAGCTCTAGGGCTCGCTCTCTTACTGATCCTCTTCTTCAGCCTCACCAGCTTGTGAACCAGGTATCTGTTTTTTTTCGCACTTCTATTATTTACTTATCAATCCTGGCATTTTCTTGATTTGTATTTTCGTTGTTGATTACCTATTTATGGGCGATGAATCCGTAGCTTTTGAGAGTTTGCTGTATTTCAATTGATAGATTAGATTTCCGTGCATCATGGGAATAATGCACTAAAATAGTGGAAGAAAATTTGGTCACAGAATTAGACTAATATACTAAGAATTGTTTATTATGATGCTATTTAGAAATGCCACCGGCAGACAGTGAGATTTTAAGATGATCCTCTGTTCTACTTTGACATTATTTCTTTATTAGTCCATTAAAAATATAATCACACATTTCGATATATTATTGATGAGAAGGTATTTTAGCCACAAAATGCTCTAAAAAGATTAAGATCCCAAGTTTCAAAAGTGTTATAGCCTATATAGGACATGAATGTTTAGAGGTATATATTACTACCTCAAATTTCAAGTTTATTTTCTAAAAAAATTCATGACAAATCAAACTATGCAAAAAAATAAAATAAAGCAGAGTCGTATTCATTTAAGTCAAAACTAACTCAAGGCTGGTAATTTTTCAATGCATCATTAAGTAATTCTTGAAAGTATTCTAATATGCAGGGTAGCAGAAAATGGTGTTCATTCTTTCTTTTTACACTACCTCACTGTATAACCAATACAAATACATTTATGAAGATATATAACAACATTGGCTTAAGGTATTAATTTTAAGAAGACAAAAACAGTGCTATTATAGGTTTTGGAAAAAATGAAAATAACACAACTAAGTGCTGCTAATGTAATTTGAACATATACATCATTTTAAACCCCAGAACATTGCTTTAATAACTTCATTGTGAGTTTTCTGTTGAAATTCAGTAATATATGTAACACACAATTAATGTTTTATAATGTAAATCATCTATATATAAAGCATTTTATGACCAAGGCAACATTGAACCCTCTTAGTAGCATGCAGATCCAAGAAAGCTCCGGTCTGTGGGTGAGGCTGTGAGGATAATTCATTTTTCTGCAAAAGTGGGCATTTTAGTCCGACATCTTTGGTACTAATCTACCCGCAATCTGAAATAGAAATTGCGGAGGTTGAGCCATTTTGTAGGTTTAGCTTAGACTTGGTCAAGAATGTATGTTCATTTGTAGTGGTTTCAGCAGGAAACCGCAAATTGATGACAGACTCATTGCACTTTAGCTTCCTTCCCGTTTCTTGTTTTTATGTGATCATACATATGGCAATTGGGCTACTTTTTCCTCCAGGAATCCTAAGAGTAATCTTTTGCTGTCCAATTTCATTCCCCCCCCACCCCCCACCCCCCAAAAAAAATAAAAATAAAAAATAAAAAATAAAAAATTAAGAACACTCCATTTGCTTTCTACTATGGTGTCATGGGGTGAGTTTGTCTAAGTTCAGTCTTTTTGATGTTTGTCTTTGGCAGGAAGTGAAGGTTGATGATTTAGAGACGAACCATTTCGTCCTCGTTCATGGTGGTGGATTTGGGGCCTGGTGTTGGTATAAAACCATTGCACTTTTAGAAGAAGCTGGATTTAAAGTTACTGCAGTTGATTTAACCGGTTCAGGCATTCATTCTTTCGACACAAATAGCATCGCAAGCCTATCGCAATATGTACAGCCGCTCACTGATTTTCTTGAGAAGCTTGCTGATGGAGAAAAGGTTAGTTCTGTATCATTTCTAGCATTCTGTTTCCCACTGAATCCACTATTATATCTTGCATTCTTTTGGAAATTCAGAGCTTTAAAGAAAACCACTTGCTTCTAATTCTTGGGCACTAGTGGAGATTGTCTGGTGGAGTTTTTATAAGAATTGAGTATATTAAAAAAAGAGTGATTTGTAGGAACTTTTTATTCTTTGCCAAGTTAGCTGTTCCAAAACTCCGGTACCTGCAAAAGCGCATTCTTTTCCATTATCTGTTGTGATTGAGAGAAGACCATGCTCATTTTTGCTGTAAGAGGCGGTATTCAGTACAAACAGCCTTCTTCCATTCCTTCTCCTCAAATGAGGTCTTATAGAAGGATAAGCATTCACATCTCTTTGAAGCAAAACTTCACTGTTTCAACATGATTCATCTTAAATTAAACTAAATACAAGTGACCCAGAGTGCGAAATCAGGAAACAGGGGAACAAGATGGAAAAGGTCATATCATCAATAATCATAGGAACTTTCTGTATGATTTAACTTAAAGTACTCTGTCCCTAGCCAAGTCTTTGTTGCATTAGGTAGGTGAAGATCAGCAATTCATGATAAAACAGAAAGGAAAAGTTTTCTTACATCGGATTAATCTATTTTGTTATGCTCATTGGGCAAGTTAATTAGTCGCAAAGTGAGGCTTGGATATATTACTTCATGATACTTTTAGATATGAATACTGAGTTTTGTGAATCTCCAAATCCCAACCTAACTACAGTGGGAAGTCCTTATCACCCTTCATAACTATGTTTGCTCTGCCGTTGTTGAATTAAAGTTGGAATATTTCTTTAAACATGTAGGTGATTTTGGTGGGACATGATTTTGGCGGTGCCTGTATATCCTTTGCGATGGAGCGCCATCCCCTTAAGGTTTCGAAAGCTGTGTTTGTTGCTGCTGCAATGCTCACTAGTGGACAAAGTGCCCTTGATATGTTCTCACAAAAGGTAAAAGTTGGTCATTTTGATCAACTACTTTCAATTGGTTCTTTTGAAATCTGCACTGCACACCCAATTTGACCTTTGTCCGTGTAAGTTTATGTTACATGTCTCCTTTGGTTATTGAGCTCATTGATCATTTATTCAGGTGATCTACACTTATCCCTTATCTTAGTTTGTGATCAGATAATCTCTGGCAGATGTAGAAGTAGTTTTCTCTTGTGAATATTTGGGGCAGGGCTATGACAGTTGAAACTACATGATACAGATGTTGATTTCACTGTTCCTCTAGAGACCAATTAATGGCTCTTGGAGCTCTTGCTTTAAAGTCAATCTCATTTTTACATGGGTTACTATGTTTCAGTAAGCATCGGCATCAGTGCTTCATCATTGAGGACATAGATGCCATGATATACTCATGGACAAATTTAAACTTAAGCCTTGAAGATTAGGGATGTCACTGCTGTGCAGTTTTTCTGTGACATGCTTCAAGGAATCCACTATTCATCATGATAAACCACTAGAACACATGCTATATGTTTCAGGTGAAGGAGTGAACTATGTGCTCCTGTATAGTTTCTCCAGGAACTGTCTGTAGTTTTTAGGAAAACTTGTGAATGAATCATCTCTGGTTTCATGGAGAAACTTTGCTTATTGAAATGAGATCTAGAATATTTGATGAAAATTGTCCCAAAATCTGTCTCTGGCAAGGTAATAAAGAAAAAGAGAGAGAGAGAGAGAGAGGGAGAGAGATATTGAAGGTGACTTACCTCACGCTAACTTTTACAGTCCCTCTCGAAATTGGGTTGACAAAATTCTTGATACTGCATTTGGTATTGTAATTCTAGAATGAAGTGAATTAGAATTTAAAAGGATCCCTTAGTATCTGGAGTTGTGGTGGTTGAAGCTCTTAAGCTGCTTGTTTGACTAATTGAGTTTTAAGTTCCCCTGTTGTTAACAAAAGTTCATATTCATTGCAGACAGATTCAAATGACCTTATGAGACAGTCTCAAATATTTATTTATGCCAATGGGAACGACAAGCCTCCAACTGCTATTGATTTGGACAAGTCACTCCTCAGGGACTTGTTATTCAACCATAGTCCTGCTAAGGTATGTTGTCTTTGAGTTATAGATGAAGTATTTAATGTTTCATAAAATCGCAAAATCTACTTTTTCAGCTCTTCCGTTGATGCTAAAATGGACTCTTCCAAGTAGTACTTTTATTTTCTAATCTAAAACATAACTTGTGAAAATCTTTGTAATTTCCGTTACTGGTCAAGAGCACTACAAGTTGGGAGTCGGGAGAAAATGTTAGGGAACCAATATGGGTTAGCAACATATTTCTTTTGGGGCAGATGTCAATGGTGCTTACAAGTTGAATATATGGGCTCCTGAGTGTGGTATATGTGACTCCACATTAGTAGGTTAGTTATCCTGTGACATTGCCTGAGAGCACAGTTAAATTGAGAGTCTTATCTAATTCCTAACCTGGCTCCTATATCTTGACATTAATTGTTGATCATTCAGTGGATACCCTAAACCTGTAATATGTCTTGCTAATTGTTGGTTTATTAGAAGGTAAGGGAAAGATGTAAATTGATTTTCTTTATGTGGGTTTTAAAATGGGTAAATTTTTTCTGTACTAGTATATAGCTGTGGGGAAATTGCCATTTGTCAAACTCTCTCTTCTTACCATTTAAGTTGTGTGCAGGATGTTGCATTAGCATCTGTGTCAATGAGGCCAATTCCCTTTTCCCCAGTTTTGGAGAAGCTTTGTCTATCCGACTCCAAGTATGGTTGTGTTAGGCGGTTTTATGTAGAAACGACAGAAGATAATGCGATACCAAAAGCCTTACAGCAGAATCTAATTAGCAATAATCCTCCAGAACAAGTTTTTCATCTCAAGGGTGCTGATCACTCGCCTTTTTTCTCCAAGCCTCAAGGTCTACATAGGATACTGGTAGAGATCTCCAGGATTCCATAAACTTGGAAGTTGTTTTGCTGAATTCCTTATTATTAGAAAAGTCACACCGACACAAATGTAGCAAAGTTATTGTTGTGTAAATTAACCATGTGGAATGCCTATTGGTGTACATGTTCGGTTTATCCAATTACTTTGTTCCATTTGCTATACTTGAGACAGTGAGAATTCCCTTTACTCGGGAAAAAGAATGCTTTAAGATTTGAATGTC</genome_strand>
        <mrna_strand>GTGGCATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAAGAATCGATCGTCTAAGAGAGACGATTCCATCATTCAGGAGCGAGCTCTCGCCGCCGCGATTCTCCTACAGCAGCAAATGCAAAACGGCGGAGGAGGTGGTGCTGCTCCTTTTGATCGTTCAGCTTCGCTTCGGTATCCGAATTCGAATTCTAAGAAGAATCAACCTCTACCGCGTTCCTCAAGCTCTAGGGCTCGCTCTCTTACTGATCCTCTTCTTCAGCCTCACCAGCTTGTGAACCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTGAAGGTTGATGATTTAGAGACGAACCATTTCGTCCTCGTTCATGGTGGTGGATTTGGGGCCTGGTGTTGGTATAAAACCATTGCACTTTTAGAAGAAGCTGGATTTAAAGTTACTGCAGTTGATTTAACCGGTTCAGGCATTCATTCTTTCGACACAAATAGCATCGCAAGCCTATCGCAATATGTACAGCCGCTCACTGATTTTCTTGAGAAGCTTGCTGATGGAGAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATTTTGGTGGGACATGATTTTGGCGGTGCCTGTATATCCTTTGCGATGGAGCGCCATCCCCTTAAGGTTTCGAAAGCTGTGTTTGTTGCTGCTGCAATGCTCACTAGTGGACAAAGTGCCCTTGATATGTTCTCACAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATTCAAATGACCTTATGAGACAGTCTCAAATATTTATTTATGCCAATGGGAACGACAAGCCTCCAACTGCTATTGATTTGGACAAGTCACTCCTCAGGGACTTGTTATTCAACCATAGTCCTGCTAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTGCATTAGCATCTGTGTCAATGAGGCCAATTCCCTTTTCCCCAGTTTTGGAGAAGCTTTGTCTATCCGACTCCAAGTATGGTTGTGTTAGGCGGTTTTATGTAGAAACGACAGAAGATAATGCGATACCAAAAGCCTTACAGCAGAATCTAATTAGCAATAATCCTCCAGAACAAGTTTTTCATCTCAAGGGTGCTGATCACTCGCCTTTTTTCTCCAAGCCTCAAGGTCTACATAGGATACTGGTAGAGATCTCCAGGATTCCATAAACTTGGAAGTTGTTTTGCTGAATTCCTTATTATTAGAAAAGTCACACCGACACAAATGTAGCAAAGTTATTGTTGTGTAAATTAACCATGTGGAATGCCTATTGGTGTACATGTTCGGTTTATCCAATTACTTTGTTCCATTTGCTATACTTGAGACAGTGAGAAATTCCCTTACTCGGGAAAAAGAATGCTTTAAGAATTGAATGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577804" ref_strand="+" ref_description="SGN-U577804 Tomato 200607#2 [10 ESTs aligned] ">
      <seq>cagaggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="70162" stop="62536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69865" g_stop="69807" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68945" g_stop="68902" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="103" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66590" g_stop="66411" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="283" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65256" g_stop="65194" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="346" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65002" g_stop="64963" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="386" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="63105" g_stop="62835" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="657" r_length="271" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U577804" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69865" e_stop="69807"/>
          <exon e_start="68945" e_stop="68902"/>
          <exon e_start="66590" e_stop="66411"/>
          <exon e_start="65256" e_stop="65194"/>
          <exon e_start="65002" e_stop="64963"/>
          <exon e_start="63105" e_stop="62835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>CAGAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596918" ref_strand="+" ref_description="SGN-U596918 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>atatagtgctcgctccctctttttccaagaattcatccaggggcccttactccatagggccttgtctaatagggaaaagccttccatttccgtcaaatgacccggcctcccctggctcttccaccgtccgggctccctttcctccctatgggatgctccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="+" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="65467" stop="66226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65777" g_stop="65926" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="162" r_length="150" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="+" ref_id="SGN-U596918" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>150</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65777" e_stop="65926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTCTTTTTCCAAGAATTCATCCACTTCCCCTTACTCCATAGGGCCTTCTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCAGCCTCCCCTGGCTCTTCCACCGTCCGAGCTCCCTTTCCTCCCTATGGTATGCTCCCCC</genome_strand>
        <mrna_strand>CTCCCTCTTTTTCCAAGAATTCATCCAGGGGCCCTTACTCCATAGGGCCTTGTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCGGCCTCCCCTGGCTCTTCCACCGTCCGGGCTCCCTTTCCTCCCTATGGGATGCTCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590718" ref_strand="+" ref_description="SGN-U590718 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gggataacgaattcagtgtttcagctagctccagttacaaatcagactgcctattagttctatgacttccttttctcttgagctacttttggaaagcctagataagaatatagttgttgaagtatcctcctcatctgttgctatcccattccctgctccacttttcagatatacctgtgaattatgagatcaggaaaaagaggtgcaggacccagagttgcaaagtgacacttgaacttcgttcctgcagccaaagaaattgaccggagagtgcactgtcaggagttagattcgatcttcacggattattctgtggggaagtacttctgaaaagcaagatcctgagtccagattcctctgtcagatcaaaagtacttcacggattgtttccacatgctgcaaaaagagatctcgattttatgcttgttctaaagaggatatgagtattataggggaagttgatgcttgggatgtttatagttcaggtccttctgcattctattatgatggagatgatttgtcacatatacattctcatggtgaagaaaaccttaaaaattatttgacactcgagctatgctcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="72352" stop="71169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72053" g_stop="71469" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U590718" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72053" e_stop="71469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTC</genome_strand>
        <mrna_strand>GGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590788" ref_strand="+" ref_description="SGN-U590788 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aagcggaagctaccggagtatanaactcgccaccgtcncangaccggaacttcatacgcaaccggatgaaacccctaaaaccgaatcaattttcccgccgtcagcttcccatcatgttagaattcttgaaaaatctggtaactcgatggtactgtaagattttcttatccntatttaaaataatcaaagaaatcattctttattttganaaactcaatanatcttttctttcttgaaaaataanaatttgttttcacttctttaaggagagaggggatgaatgcccganactatttctgtcnaaggggttttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="75347" stop="74431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75047" g_stop="74731" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U590788" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>317</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75047" e_stop="74731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCGGAAGCTAGCGGAGTATAGAACTCACCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTCGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATGTTTAAAATAATCAAAGAAATCATTCTTTATTTTAAGAAATTCAATAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTG</genome_strand>
        <mrna_strand>AAGCGGAAGCTACCGGAGTATANAACTCGCCACCGTCNCANGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCNTATTTAAAATAATCAAAGAAATCATTCTTTATTTTGANAAACTCAATANATCTTTTCTTTCTTGAAAAAT-AANAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGANACTATTTCTGTCNAAGGGGTTTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580676" ref_strand="+" ref_description="SGN-U580676 Tomato 200607#2 [6 ESTs aligned] ">
      <seq>tcttgatttgtatgcttgtctaaaagaggatatggggcagtataggggctcttgatgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaatttggtgttaaccaaatttactgtaatcaactccaatctactgcatcgaaaaataatttattttctctctttattattatattattattttttatttcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="80884" stop="78164"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80584" g_stop="80197" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80107" g_stop="79991" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="505" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79887" g_stop="79792" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="601" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78624" g_stop="78464" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="762" r_length="161" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U580676" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80584" e_stop="80197"/>
          <exon e_start="80107" e_stop="79991"/>
          <exon e_start="79887" e_stop="79792"/>
          <exon e_start="78624" e_stop="78464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</genome_strand>
        <mrna_strand>TCTTGATTTGTATGCTTGTCTAAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593829" ref_strand="+" ref_description="SGN-U593829 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>actgcccactgcagaacttcttcctacgctatactcaccaccgtcgcagaaccggaagctaccggagtatagaactcgccaccgtcgcagaagcggaacctaccggagtataaaactcgccaccgtcgcaggaccggaacatcatacgcaaccggatgaaaacccctaaaaccgaatcgattttcccgccgtcagcttcccatcatgttagaattcttgaaaaatctggtaactcgatggtacagagtaagattttcttatccatgtttaaagaaatcattcttttttttaagaaattcaagaaatcttttctttcttaaaaaatcaagaatttgtgtttacttctttaaggagagaggggatgaatgcccgagactatttctgtcaatggggttttcttggattattgcacaagtgttgttgactagttcttataaaacagagttgaatttctgtcaggggttttctgaatgatttcaccagggttattgatgagttgctttaaaacagactcaaatttctgtccgagttttcttgaatgattttaaaaaagcatcgatgctggtgccaccaagatgtactaatttaccccttcaaaggtattatatggaaagttgtggagttgttcttgaagccccattcgcacaattctagtttaattataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0124N09-uPRi7/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0124N09.1" temp_strand="-" temp_description="C02HBa0124N09.1  AC215390.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0124N09 sequenced_by:kribb upload_account_name:korea">
        <position start="85149" stop="83885"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84849" g_stop="84185" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0124N09.1" gen_strand="-" ref_id="SGN-U593829" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0124N09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U593829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84849" e_stop="84185"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGCCCACTGCAGAACTTCTTCCTACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAA</genome_strand>
        <mrna_strand>ACTGCCCACTGCAGAACTTCTTCCTACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>16</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="3272" PGL_stop="7442"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3272" e_stop="3516"/>
            <exon e_start="4287" e_stop="4668"/>
            <exon e_start="5047" e_stop="5243"/>
            <exon e_start="5418" e_stop="5565"/>
            <exon e_start="6171" e_stop="6324"/>
            <exon e_start="7097" e_stop="7442"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.988"/>
          <exon-intron don_prob="0.909" acc_prob="0.878" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="3272" e_stop="3516" e_length="245"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="3517" i_stop="4286" i_length="770"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4287" e_stop="4668" e_length="382"/>
          </exon>
          <intron i_serial="2" don_prob="0.909" acc_prob="0.878">
            <gDNA_intron_boundary i_start="4669" i_stop="5046" i_length="378"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5047" e_stop="5243" e_length="197"/>
          </exon>
          <intron i_serial="3" don_prob="0.979" acc_prob="0.959">
            <gDNA_intron_boundary i_start="5244" i_stop="5417" i_length="174"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="5418" e_stop="5565" e_length="148"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.992">
            <gDNA_intron_boundary i_start="5566" i_stop="6170" i_length="605"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="6171" e_stop="6324" e_length="154"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="1.000">
            <gDNA_intron_boundary i_start="6325" i_stop="7096" i_length="772"/>
          </intron>
          <exon e_serial="6" e_score="0.983">
            <gDNA_exon_boundary e_start="7097" e_stop="7442" e_length="346"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3272" stop="3516"/>
              <exon start="4287" stop="4668"/>
              <exon start="5047" stop="5243"/>
              <exon start="5418" stop="5565"/>
              <exon start="6171" stop="6324"/>
              <exon start="7097" stop="7442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584284" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTACACACAAAAGGAATAAACGGATTTAAAAAGTTGGTAATAGAATAGAAGGAGGAGAAGCATTATATTGACCATTTGGTCGGTGCTTTTCCTCCAAGAAACTTCTCCGATTACTCTCCATTTGCAAAATTTAACGACTTGCTTATAAGCCGAGTTAGGGTTTTGAACAGTTGTAATTTTTTTTAATGGAGGTTGCTGGATCTACAAGGAAGCCATTTCAACAAACCGAGATTAACTGGGACAA : GCTTGATAAGACTAGGTTCTATGTCGTAGGAGCTGGGATATTTACAGGGCTTACTGTTGCACTATACCCCATTTCTGTCATCAAGACTAGAATGCAGGTGGCAACCAATAATGCTGCAAAAGAGAGTGCATTTTCTGTTGTCAGGGGCCTAGTGCGAAATGATGGTATTCCCGGTTTATATAGAGGATTTGGAACTGTCATTACAGGGGCGGTTCCTGCCAGAATTATATTTCTCACAGCACTAGAGACCACTAAGGTGACTGCATTTAAGATGGTGGAACCATTCAAGCTATCAGAACCTGTACAGGCAGCTATAGCAAATGGTGTTGCTGGCATGCTGGCGTCTCTTTGTTCACAATCCGTCTTTGTTCCAATTGACATA : GTTAGTCAAAGGTTAATGGTGCAAGGATACTCAGGACATGCAAGCTACAATGGAGGCTTGGATGTTGCTCGCAAAGTTCTGAAGTCAGAAGGTATACGTGGACTATATAGAGGATTCAGTCTGTCTGTTCTAACATACTCCCCATCCAGTGCTGTATGGTGGGCAAGTTATGGTTCGAGCCAGCGCTTCATATGGAG : CAAGCTCTTGGATAATGGAACTGAGCATGGTGGGCCTGCTCCCAGCCAGGGGAAAATAGTGTCAGTTCAAGCTGCTGGTGGGATCATCGCCGGTGCTACTGCATCTTGCATAACAACTCCATTGGACACCATTAAAACTAGGTTGCAG : GTGATGGGACACGATAAGAGACCTAGTGCAGGGCAAGTAGTTAAGCAGCTAATTGCTGAGGATGGTTGGACAGGATTTTACAGGGGATTAGGTCCAAGATTTGTCAGCATGTCAGCGTGGGGAACCTCCATGATACTTGCCTATGAATATCTCA : AGCGCTTGTGTGCAGTAAACGAATAGATTGATGAAAGCTAGCTGCCAGACGACTCTTGCGGTAGGATTTTTATACTACTGACATACAGTATTTGAGAGCTGGAGATAACAAGACCGCGGCTGATTAGCTGTCTGTATACAAATGACACTATGACTGTTATATGAGTTGACTTGGAATCCAAGTACCTGGCCAAAATACAATTAATTTTTCTTAGGGATTTCTTACAATATTCTTAAATGATTTTTGCCAGATAAATGCCACATTCATTGGTTGTAGTGAGTCATGACAAGGAGGACCCTTGAATAATTTTTGCTAGATAATAAATGTAAAATGTAATATTCATTCA</gDNA_template>
            <first_frame> F  T  H  K  R  N  K  R  I  *  K  V  G  N  R  I  E  G  G  E  A  L  Y  *  P  F  G  R  C  F  S  S  K  K  L  L  R  L  L  S  I  C  K  I  *  R  L  A  Y  K  P  S  *  G  F  E  Q  L  *  F  F  L  M  E  V  A  G  S  T  R  K  P  F  Q  Q  T  E  I  N  W  D  K :   L  D  K  T  R  F  Y  V  V  G  A  G  I  F  T  G  L  T  V  A  L  Y  P  I  S  V  I  K  T  R  M  Q  V  A  T  N  N  A  A  K  E  S  A  F  S  V  V  R  G  L  V  R  N  D  G  I  P  G  L  Y  R  G  F  G  T  V  I  T  G  A  V  P  A  R  I  I  F  L  T  A  L  E  T  T  K  V  T  A  F  K  M  V  E  P  F  K  L  S  E  P  V  Q  A  A  I  A  N  G  V  A  G  M  L  A  S  L  C  S  Q  S  V  F  V  P  I  D  I  :  V  S  Q  R  L  M  V  Q  G  Y  S  G  H  A  S  Y  N  G  G  L  D  V  A  R  K  V  L  K  S  E  G  I  R  G  L  Y  R  G  F  S  L  S  V  L  T  Y  S  P  S  S  A  V  W  W  A  S  Y  G  S  S  Q  R  F  I  W  S :   K  L  L  D  N  G  T  E  H  G  G  P  A  P  S  Q  G  K  I  V  S  V  Q  A  A  G  G  I  I  A  G  A  T  A  S  C  I  T  T  P  L  D  T  I  K  T  R  L  Q  :  V  M  G  H  D  K  R  P  S  A  G  Q  V  V  K  Q  L  I  A  E  D  G  W  T  G  F  Y  R  G  L  G  P  R  F  V  S  M  S  A  W  G  T  S  M  I  L  A  Y  E  Y  L   : K  R  L  C  A  V  N  E  *  I  D  E  S  *  L  P  D  D  S  C  G  R  I  F  I  L  L  T  Y  S  I  *  E  L  E  I  T  R  P  R  L  I  S  C  L  Y  T  N  D  T  M  T  V  I  *  V  D  L  E  S  K  Y  L  A  K  I  Q  L  I  F  L  R  D  F  L  Q  Y  S  *  M  I  F  A  R  *  M  P  H  S  L  V  V  V  S  H  D  K  E  D  P  *  I  I  F  A  R  *  *  M  *  N  V  I  F  I   </first_frame>
            <second_frame>  L  H  T  K  G  I  N  G  F  K  K  L  V  I  E  *  K  E  E  K  H  Y  I  D  H  L  V  G  A  F  P  P  R  N  F  S  D  Y  S  P  F  A  K  F  N  D  L  L  I  S  R  V  R  V  L  N  S  C  N  F  F  *  W  R  L  L  D  L  Q  G  S  H  F  N  K  P  R  L  T  G  T   : S  L  I  R  L  G  S  M  S  *  E  L  G  Y  L  Q  G  L  L  L  H  Y  T  P  F  L  S  S  R  L  E  C  R  W  Q  P  I  M  L  Q  K  R  V  H  F  L  L  S  G  A  *  C  E  M  M  V  F  P  V  Y  I  E  D  L  E  L  S  L  Q  G  R  F  L  P  E  L  Y  F  S  Q  H  *  R  P  L  R  *  L  H  L  R  W  W  N  H  S  S  Y  Q  N  L  Y  R  Q  L  *  Q  M  V  L  L  A  C  W  R  L  F  V  H  N  P  S  L  F  Q  L  T  * :   L  V  K  G  *  W  C  K  D  T  Q  D  M  Q  A  T  M  E  A  W  M  L  L  A  K  F  *  S  Q  K  V  Y  V  D  Y  I  E  D  S  V  C  L  F  *  H  T  P  H  P  V  L  Y  G  G  Q  V  M  V  R  A  S  A  S  Y  G   : A  S  S  W  I  M  E  L  S  M  V  G  L  L  P  A  R  G  K  *  C  Q  F  K  L  L  V  G  S  S  P  V  L  L  H  L  A  *  Q  L  H  W  T  P  L  K  L  G  C  R :   *  W  D  T  I  R  D  L  V  Q  G  K  *  L  S  S  *  L  L  R  M  V  G  Q  D  F  T  G  D  *  V  Q  D  L  S  A  C  Q  R  G  E  P  P  *  Y  L  P  M  N  I  S  :  S  A  C  V  Q  *  T  N  R  L  M  K  A  S  C  Q  T  T  L  A  V  G  F  L  Y  Y  *  H  T  V  F  E  S  W  R  *  Q  D  R  G  *  L  A  V  C  I  Q  M  T  L  *  L  L  Y  E  L  T  W  N  P  S  T  W  P  K  Y  N  *  F  F  L  G  I  S  Y  N  I  L  K  *  F  L  P  D  K  C  H  I  H  W  L  *  *  V  M  T  R  R  T  L  E  *  F  L  L  D  N  K  C  K  M  *  Y  S  F  </second_frame>
            <third_frame>   Y  T  Q  K  E  *  T  D  L  K  S  W  *  *  N  R  R  R  R  S  I  I  L  T  I  W  S  V  L  F  L  Q  E  T  S  P  I  T  L  H  L  Q  N  L  T  T  C  L  *  A  E  L  G  F  *  T  V  V  I  F  F  N  G  G  C  W  I  Y  K  E  A  I  S  T  N  R  D  *  L  G  Q  :  A  *  *  D  *  V  L  C  R  R  S  W  D  I  Y  R  A  Y  C  C  T  I  P  H  F  C  H  Q  D  *  N  A  G  G  N  Q  *  C  C  K  R  E  C  I  F  C  C  Q  G  P  S  A  K  *  W  Y  S  R  F  I  *  R  I  W  N  C  H  Y  R  G  G  S  C  Q  N  Y  I  S  H  S  T  R  D  H  *  G  D  C  I  *  D  G  G  T  I  Q  A  I  R  T  C  T  G  S  Y  S  K  W  C  C  W  H  A  G  V  S  L  F  T  I  R  L  C  S  N  *  H   : S  *  S  K  V  N  G  A  R  I  L  R  T  C  K  L  Q  W  R  L  G  C  C  S  Q  S  S  E  V  R  R  Y  T  W  T  I  *  R  I  Q  S  V  C  S  N  I  L  P  I  Q  C  C  M  V  G  K  L  W  F  E  P  A  L  H  M  E  :  Q  A  L  G  *  W  N  *  A  W  W  A  C  S  Q  P  G  E  N  S  V  S  S  S  C  W  W  D  H  R  R  C  Y  C  I  L  H  N  N  S  I  G  H  H  *  N  *  V  A   : G  D  G  T  R  *  E  T  *  C  R  A  S  S  *  A  A  N  C  *  G  W  L  D  R  I  L  Q  G  I  R  S  K  I  C  Q  H  V  S  V  G  N  L  H  D  T  C  L  *  I  S  Q :   A  L  V  C  S  K  R  I  D  *  *  K  L  A  A  R  R  L  L  R  *  D  F  Y  T  T  D  I  Q  Y  L  R  A  G  D  N  K  T  A  A  D  *  L  S  V  Y  K  *  H  Y  D  C  Y  M  S  *  L  G  I  Q  V  P  G  Q  N  T  I  N  F  S  *  G  F  L  T  I  F  L  N  D  F  C  Q  I  N  A  T  F  I  G  C  S  E  S  *  Q  G  G  P  L  N  N  F  C  *  I  I  N  V  K  C  N  I  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3449" stop="3516"/>
                    <exon start="4287" stop="4668"/>
                    <exon start="5047" stop="5243"/>
                    <exon start="5418" stop="5565"/>
                    <exon start="6171" stop="6324"/>
                    <exon start="7097" stop="7122"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>972</number_coding_nucleotides>
                  <number_encoded_amino_acids>324</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFLMEVAGSTRKPFQQTEINWDKLDKTRFYVVGAGIFTGLTVALYPISVIKTRMQVATNNAAKESAFSVVRGLVRNDGIPGLYRGFGTVITGAVPARIIFLTALETTKVTAFKMVEPFKLSEPVQAAIANGVAGMLASLCSQSVFVPIDIVSQRLMVQGYSGHASYNGGLDVARKVLKSEGIRGLYRGFSLSVLTYSPSSAVWWASYGSSQRFIWSKLLDNGTEHGGPAPSQGKIVSVQAAGGIIAGATASCITTPLDTIKTRLQVMGHDKRPSAGQVVKQLIAEDGWTGFYRGLGPRFVSMSAWGTSMILAYEYLKRLCAVNE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="7441" PGL_stop="7268"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7441" e_stop="7268"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="7441" e_stop="7268" e_length="174"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7441" stop="7268"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595697" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATGAATATTACATTTTACATTTATTATCTAGCAAAAATTATTCAAGGGTCCTCCTTGTCATGACTCACTACAACCAATGAATGTGGCATTTATCTGGCAAAAATCATTTAAGAATATTGTAAGAAATCCCTAAGAAAAATTAATTGTATTTTGGCCAGGTACTTGGATTCCA</gDNA_template>
            <first_frame> E  *  I  L  H  F  T  F  I  I  *  Q  K  L  F  K  G  P  P  C  H  D  S  L  Q  P  M  N  V  A  F  I  W  Q  K  S  F  K  N  I  V  R  N  P  *  E  K  L  I  V  F  W  P  G  T  W  I  P </first_frame>
            <second_frame>  N  E  Y  Y  I  L  H  L  L  S  S  K  N  Y  S  R  V  L  L  V  M  T  H  Y  N  Q  *  M  W  H  L  S  G  K  N  H  L  R  I  L  *  E  I  P  K  K  N  *  L  Y  F  G  Q  V  L  G  F   </second_frame>
            <third_frame>   M  N  I  T  F  Y  I  Y  Y  L  A  K  I  I  Q  G  S  S  L  S  *  L  T  T  T  N  E  C  G  I  Y  L  A  K  I  I  *  E  Y  C  K  K  S  L  R  K  I  N  C  I  L  A  R  Y  L  D  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="11491" PGL_stop="7964"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11491" e_stop="11367"/>
            <exon e_start="11282" e_stop="11161"/>
            <exon e_start="10934" e_stop="10882"/>
            <exon e_start="10643" e_stop="10580"/>
            <exon e_start="10452" e_stop="10410"/>
            <exon e_start="10311" e_stop="10264"/>
            <exon e_start="8643" e_stop="7964"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.871" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.092" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11491" e_stop="11367" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11282" e_stop="11161" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10934" e_stop="10882" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10643" e_stop="10580" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.871" acc_prob="0.977">
            <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10452" e_stop="10410" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10311" e_stop="10264" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.092">
            <gDNA_intron_boundary i_start="10263" i_stop="8644" i_length="1620"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="8643" e_stop="7964" e_length="680"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11491" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8643" stop="7964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562810" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACACTGAAGAGAGTTCAAAAATCTTTTAGAAGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG : GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG : TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG : GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG : AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG : GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT : ATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTATTGGCAGCTTTGGAGAAAAGTAATTTATTGGGCAAAATTGATACAGGCTGTTTGGTTTGCCTCCCCTTCTACAGTAAAGGACTAAGAGTGAGATCAACACACTATTCCATTCCTTTTCCATTTCATATTTTCCTAGCTAGTGAAGAGTTCTGAGAGTGTAATATAGAGTAAGATAGATTCTTAAGCCATTTTTTAATGTAATTCAGCTAAAAAGACAGCCTGCTAGTTGCTTCATAATGTGATGTAGGAGCATTGATGTTTTGTTGGTCAATTTACTCAAATAGTAACTGGTCTTTGGTTTTTTGGAACTTTATGGCCCATCAAATTATCTCAAGAATAAATTGGCTGGCTGGGCGTTTGCAACTCC</gDNA_template>
            <first_frame> D  T  E  E  S  S  K  I  F  *  K  R  K  R  *  A  A  *  G  K  G  R  R  S  I  R  T  K  S  P  G  N  L  T  P  V  S  K  S  M  K  R :   K  W  V  E  N  L  G  L  S  Q  K  *  Q  E  Y  V  F  V  V  E  I  K  L  I  G  S  A  S  M  E  N  T  K  P  L  L  N  L  L  S   : V  R  S  V  R  K  E  T  C  V  K  L  T  T  I  S  A  M  :  A  V  Q  R  S  I  K  Y  V  P  S  V  H  V  V  L  V  K  W  L  E   : E  M  F  Q  K  *  R  L  R  K  K  L  L  R  R :   L  S  R  M  L  E  N  G  I  G  G  H  F  Y  E  L :   *  T  K  G  S  H  R  V  Q  R  K  T  *  V  K  M  T  *  K  L  V  N  *  I  Q  H  H  H  L  R  N  M  L  R  *  T  V  M  M  T  K  M  V  N  *  I  Q  H  H  H  L  R  N  M  P  R  *  T  A  M  M  T  K  M  M  M  M  K  K  M  K  V  K  L  F  E  M  H  N  L  E  N  N  H  M  A  L  Y  R  S  P  F  M  V  H  S  L  M  H  T  S  S  F  V  L  A  A  L  E  K  S  N  L  L  G  K  I  D  T  G  C  L  V  C  L  P  F  Y  S  K  G  L  R  V  R  S  T  H  Y  S  I  P  F  P  F  H  I  F  L  A  S  E  E  F  *  E  C  N  I  E  *  D  R  F  L  S  H  F  L  M  *  F  S  *  K  D  S  L  L  V  A  S  *  C  D  V  G  A  L  M  F  C  W  S  I  Y  S  N  S  N  W  S  L  V  F  W  N  F  M  A  H  Q  I  I  S  R  I  N  W  L  A  G  R  L  Q  L  </first_frame>
            <second_frame>  T  L  K  R  V  Q  K  S  F  R  R  E  K  D  E  R  R  K  E  R  A  A  E  A  S  E  Q  S  R  L  E  T  *  R  R  Y  Q  N  Q  *  N   : G  S  G  W  K  I  *  A  S  L  R  N  N  R  S  M  S  S  L  *  R  S  N  *  L  E  A  Q  V  W  K  I  Q  S  H  Y  *  T  C  *  V  :  S  E  V  F  E  K  K  R  A  S  S  L  P  Q  S  L  Q  W :   L  C  K  G  A  *  S  M  C  Q  V  F  M  S  C  W  S  S  G  W  K  :  R  C  F  R  S  R  G  *  E  K  S  S  *  G   : G  Y  Q  E  C  S  R  T  G  *  A  V  T  S  T  S   : Y  E  Q  R  E  V  T  E  F  R  E  K  P  K  S  R  *  H  E  S  W  *  T  E  Y  S  I  I  T  *  G  I  C  *  G  K  P  *  *  *  R  R  W  *  T  E  Y  S  I  I  T  *  G  I  C  Q  G  K  P  R  *  *  R  R  *  *  *  *  R  R  *  R  S  S  Y  L  R  C  T  I  W  R  I  T  I  W  P  F  I  D  L  P  S  W  S  I  V  *  C  T  L  A  H  L  Y  W  Q  L  W  R  K  V  I  Y  W  A  K  L  I  Q  A  V  W  F  A  S  P  S  T  V  K  D  *  E  *  D  Q  H  T  I  P  F  L  F  H  F  I  F  S  *  L  V  K  S  S  E  S  V  I  *  S  K  I  D  S  *  A  I  F  *  C  N  S  A  K  K  T  A  C  *  L  L  H  N  V  M  *  E  H  *  C  F  V  G  Q  F  T  Q  I  V  T  G  L  W  F  F  G  T  L  W  P  I  K  L  S  Q  E  *  I  G  W  L  G  V  C  N  S </second_frame>
            <third_frame>   H  *  R  E  F  K  N  L  L  E  E  K  K  M  S  G  V  R  K  G  P  P  K  H  Q  N  K  V  A  W  K  P  N  A  G  I  K  I  N  E  T  :  E  V  G  G  K  F  R  P  L  S  E  I  T  G  V  C  L  R  C  R  D  Q  I  D  W  K  R  K  Y  G  K  Y  K  A  I  T  E  P  A  K  C :   Q  K  C  S  K  R  N  V  R  Q  A  Y  H  N  L  C  N   : G  C  A  K  E  H  K  V  C  A  K  C  S  C  R  V  G  Q  V  V  G  R :   D  V  S  E  V  E  A  E  K  K  A  L  E  E  :  A  I  K  N  A  R  E  R  D  R  R  S  L  L  R  A  :  M  N  K  G  K  S  Q  S  S  E  K  N  L  S  Q  D  D  M  K  V  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E  D  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E  D  D  D  D  E  E  D  E  G  Q  V  I  *  D  A  Q  F  G  E  *  P  Y  G  P  L  *  I  S  L  H  G  P  *  F  D  A  H  *  L  I  C  I  G  S  F  G  E  K  *  F  I  G  Q  N  *  Y  R  L  F  G  L  P  P  L  L  Q  *  R  T  K  S  E  I  N  T  L  F  H  S  F  S  I  S  Y  F  P  S  *  *  R  V  L  R  V  *  Y  R  V  R  *  I  L  K  P  F  F  N  V  I  Q  L  K  R  Q  P  A  S  C  F  I  M  *  C  R  S  I  D  V  L  L  V  N  L  L  K  *  *  L  V  F  G  F  L  E  L  Y  G  P  S  N  Y  L  K  N  K  L  A  G  W  A  F  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11483" stop="11367"/>
                    <exon start="11282" stop="11161"/>
                    <exon start="10934" stop="10882"/>
                    <exon start="10643" stop="10580"/>
                    <exon start="10452" stop="10410"/>
                    <exon start="10311" stop="10264"/>
                    <exon start="8643" stop="8416"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REFKNLLEEKKMSGVRKGPPKHQNKVAWKPNAGIKINETEVGGKFRPLSEITGVCLRCRDQIDWKRKYGKYKAITEPAKCQKCSKRNVRQAYHNLCNGCAKEHKVCAKCSCRVGQVVGRDVSEVEAEKKALEEAIKNARERDRRSLLRAMNKGKSQSSEKNLSQDDMKVGELNTASSLEEYAKVNRDDDEDGELNTASSLEEYAKVNRDDDEDDDDEEDEGQVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="11460" e_stop="11367"/>
            <exon e_start="11282" e_stop="11161"/>
            <exon e_start="10934" e_stop="10882"/>
            <exon e_start="10643" e_stop="10580"/>
            <exon e_start="10452" e_stop="10410"/>
            <exon e_start="10311" e_stop="10264"/>
            <exon e_start="8688" e_stop="8331"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.871" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.929" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11460" e_stop="11367" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11366" i_stop="11283" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11282" e_stop="11161" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="11160" i_stop="10935" i_length="226"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10934" e_stop="10882" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="10881" i_stop="10644" i_length="238"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="10643" e_stop="10580" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.871" acc_prob="0.977">
            <gDNA_intron_boundary i_start="10579" i_stop="10453" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="10452" e_stop="10410" e_length="43"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10409" i_stop="10312" i_length="98"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="10311" e_stop="10264" e_length="48"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.929">
            <gDNA_intron_boundary i_start="10263" i_stop="8689" i_length="1575"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="8688" e_stop="8331" e_length="358"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11460" stop="11367"/>
              <exon start="11282" stop="11161"/>
              <exon start="10934" stop="10882"/>
              <exon start="10643" stop="10580"/>
              <exon start="10452" stop="10410"/>
              <exon start="10311" stop="10264"/>
              <exon start="8688" stop="8331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588157" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAGAAAAAGATGAGCGGCGTAAGGAAAGGGCCGCCGAAGCATCAGAACAAAGTCGCCTGGAAACCTAACGCCGGTATCAAAATCAATGAAACG : GAAGTGGGTGGAAAATTTAGGCCTCTCTCAGAAATAACAGGAGTATGTCTTCGTTGTAGAGATCAAATTGATTGGAAGCGCAAGTATGGAAAATACAAAGCCATTACTGAACCTGCTAAGTG : TCAGAAGTGTTCGAAAAGAAACGTGCGTCAAGCTTACCACAATCTCTGCAATG : GCTGTGCAAAGGAGCATAAAGTATGTGCCAAGTGTTCATGTCGTGTTGGTCAAGTGGTTGGAAG : AGATGTTTCAGAAGTAGAGGCTGAGAAAAAAGCTCTTGAGGAG : GCTATCAAGAATGCTCGAGAACGGGATAGGCGGTCACTTCTACGAGCT : GATGTTTCTGAGATTCTTAGCGTGCATCTTATGTCTATGCAACAGATGAACAAAGGGAAGTCACAGAGTTCAGAGAAAAACCTAAGTCAAGATGACATGAAAGTTGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCTAAGGTAAACCGTGATGATGACGAAGATGGTGAACTGAATACAGCATCATCACTTGAGGAATATGCCAAGGTAAACCGCGATGATGACGAAGATGATGATGATGAAGAAGATGAAGGTCAAGTTATTTGAGATGCACAATTTGGAGAATAACCATATGGCCCTTTATAGATCTCCCTTCATGGTCCATAGTTTGATGCACACTAGCTCATTTGTA</gDNA_template>
            <first_frame> R  E  K  D  E  R  R  K  E  R  A  A  E  A  S  E  Q  S  R  L  E  T  *  R  R  Y  Q  N  Q  *  N   : G  S  G  W  K  I  *  A  S  L  R  N  N  R  S  M  S  S  L  *  R  S  N  *  L  E  A  Q  V  W  K  I  Q  S  H  Y  *  T  C  *  V  :  S  E  V  F  E  K  K  R  A  S  S  L  P  Q  S  L  Q  W :   L  C  K  G  A  *  S  M  C  Q  V  F  M  S  C  W  S  S  G  W  K  :  R  C  F  R  S  R  G  *  E  K  S  S  *  G   : G  Y  Q  E  C  S  R  T  G  *  A  V  T  S  T  S   : *  C  F  *  D  S  *  R  A  S  Y  V  Y  A  T  D  E  Q  R  E  V  T  E  F  R  E  K  P  K  S  R  *  H  E  S  W  *  T  E  Y  S  I  I  T  *  G  I  C  *  G  K  P  *  *  *  R  R  W  *  T  E  Y  S  I  I  T  *  G  I  C  Q  G  K  P  R  *  *  R  R  *  *  *  *  R  R  *  R  S  S  Y  L  R  C  T  I  W  R  I  T  I  W  P  F  I  D  L  P  S  W  S  I  V  *  C  T  L  A  H  L   </first_frame>
            <second_frame>  E  K  K  M  S  G  V  R  K  G  P  P  K  H  Q  N  K  V  A  W  K  P  N  A  G  I  K  I  N  E  T  :  E  V  G  G  K  F  R  P  L  S  E  I  T  G  V  C  L  R  C  R  D  Q  I  D  W  K  R  K  Y  G  K  Y  K  A  I  T  E  P  A  K  C :   Q  K  C  S  K  R  N  V  R  Q  A  Y  H  N  L  C  N   : G  C  A  K  E  H  K  V  C  A  K  C  S  C  R  V  G  Q  V  V  G  R :   D  V  S  E  V  E  A  E  K  K  A  L  E  E  :  A  I  K  N  A  R  E  R  D  R  R  S  L  L  R  A  :  D  V  S  E  I  L  S  V  H  L  M  S  M  Q  Q  M  N  K  G  K  S  Q  S  S  E  K  N  L  S  Q  D  D  M  K  V  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E  D  G  E  L  N  T  A  S  S  L  E  E  Y  A  K  V  N  R  D  D  D  E  D  D  D  D  E  E  D  E  G  Q  V  I  *  D  A  Q  F  G  E  *  P  Y  G  P  L  *  I  S  L  H  G  P  *  F  D  A  H  *  L  I  C  </second_frame>
            <third_frame>   R  K  R  *  A  A  *  G  K  G  R  R  S  I  R  T  K  S  P  G  N  L  T  P  V  S  K  S  M  K  R :   K  W  V  E  N  L  G  L  S  Q  K  *  Q  E  Y  V  F  V  V  E  I  K  L  I  G  S  A  S  M  E  N  T  K  P  L  L  N  L  L  S   : V  R  S  V  R  K  E  T  C  V  K  L  T  T  I  S  A  M  :  A  V  Q  R  S  I  K  Y  V  P  S  V  H  V  V  L  V  K  W  L  E   : E  M  F  Q  K  *  R  L  R  K  K  L  L  R  R :   L  S  R  M  L  E  N  G  I  G  G  H  F  Y  E  L :   M  F  L  R  F  L  A  C  I  L  C  L  C  N  R  *  T  K  G  S  H  R  V  Q  R  K  T  *  V  K  M  T  *  K  L  V  N  *  I  Q  H  H  H  L  R  N  M  L  R  *  T  V  M  M  T  K  M  V  N  *  I  Q  H  H  H  L  R  N  M  P  R  *  T  A  M  M  T  K  M  M  M  M  K  K  M  K  V  K  L  F  E  M  H  N  L  E  N  N  H  M  A  L  Y  R  S  P  F  M  V  H  S  L  M  H  T  S  S  F  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11459" stop="11367"/>
                    <exon start="11282" stop="11161"/>
                    <exon start="10934" stop="10882"/>
                    <exon start="10643" stop="10580"/>
                    <exon start="10452" stop="10410"/>
                    <exon start="10311" stop="10264"/>
                    <exon start="8688" stop="8416"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKKMSGVRKGPPKHQNKVAWKPNAGIKINETEVGGKFRPLSEITGVCLRCRDQIDWKRKYGKYKAITEPAKCQKCSKRNVRQAYHNLCNGCAKEHKVCAKCSCRVGQVVGRDVSEVEAEKKALEEAIKNARERDRRSLLRADVSEILSVHLMSMQQMNKGKSQSSEKNLSQDDMKVGELNTASSLEEYAKVNRDDDEDGELNTASSLEEYAKVNRDDDEDDDDEEDEGQVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="16113" PGL_stop="14316"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16113" e_stop="15361"/>
            <exon e_start="15211" e_stop="14316"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.973" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16113" e_stop="15361" e_length="753"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.973">
            <gDNA_intron_boundary i_start="15360" i_stop="15212" i_length="149"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15211" e_stop="14316" e_length="896"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16113" stop="15361"/>
              <exon start="15211" stop="14316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575805" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTAACCCAGATTCTGCATATCAAAATGCTATCTTAAATGGATTAGAAATTTTCAAGTTGAACGACTCCAATGGAAACCTCTCCGTGCCGAATCCTGAAGTTTTCTTTCCGAATAATTCACCACCAAACAACAATAAGAAAAAGAAATCATCACACATCATTGCTGTTATCACTGCAGTGGCTGTTATTAGCGGAATTGCTCTGTTTTCAATTCTCTGTTTCTTGATTTTCCGGCGGTGGAGAAGGGGAAAAGATCTTCATACAAGCGTTACAAAGTCATCATGGATCCCTTTGTCAATTACATCGGACTCAACCCAAAGGACAGGCGGCTCACGCTCATCATCACTACCATCCGATCTGTGCCGACACTTTTTACTAGAAGAGATAAAAACTGCAACAGGCAATTTTGATGAAAAATTTGTGATTGGTTATGGAGGTTTTGGTAATGTGTACAAAGGGTACATAGACAACGGTGCAACCATAGTTGCAGTCAAGAGGTTGAATCCTTCATCAAAGCAAGGAGTCCGCGAGTTCGAAACAGAGATTCACATGCTGTCAAAGCTAAGGCATGTGCATCTGGTGTCCTTAATTGGTTATTGTGATGATAAGAATGAGATGATCTTGGTTTATGATTACATGGCTAATGGAACTCTTCGTGATCACTTGTACAAAACTGATAATGCTCCACTTCCATGGAAGAAACGCCTCGAGATTTGCATTGGCGCAGCAAAAGGATTGCATTATCTCCATACAG : GTAAAAAGGATATCATCATTCATCGAGATGTGAAGTCAACCAACATTTTATTGGATGATAAATGGGTTGCTAAGGTTTCAGATTTTGGGTTATCCAAAATCGGTCCACTTAGTGGATCAGGAAAAACTCATGTTAGCACTGTTGTGAAAGGAAGCTTTGGATATCTAGATCCTGAATACTATAAGCGACAACAGTTGACAGAAAAATCTGATGTGTATTCTTTTGGGGTAGTGCTATTCGAAGTGTTGTGTGCTAGACCAGCATTAATTCCTAACATGCCGAAAGGGCAAGTGAATTTGGCTGATTGGGCTTGTAGGAGCTGTAAAAAAGGAAATCTTCAACAAATAATTGATCCAAATTTGGAAGGACAAATCGCGCCAGAGTGCTTAAACAAGTTTGCAGAAGCAGCATACAATTGCTTGAAGGATCAAGGAGTCCAAAGGCCATCAATGAATGACGTTGTTTGGAATTTGGAATTTATATTAAAGCTTCAAGAAGCAGCTGATAATAGAGGTCACAAAATGGAATTGAACAGTTATCCGACTAGCCCGTCTTTCCCATTGATTATGAATGATCATACCAATATATCTACAGATGAAGGATTCGAGGAATTTTCAGGTTCAAATGAAGTTGGAGAAAAATACACAAGCAGTGCTTCATCCATGACCACAACTAGTGATGACAAATTGAAGAGTGAAACCATTTTCTCTGAGATTTTGAATCCATCGGGACGATGAGATTGTTACAACTAGTATGATAAATATTACATATTAGTTCTTCTCTGTTTCCTTTTTCGTCTGTTGAATTTATGTCCTTATTATATGTGGATGATGAACTGAAGCCATTATTCAGAAGTATATAAGCTATAAAATACTTTCATTATATTTTGTTGAGTG</gDNA_template>
            <first_frame> L  T  Q  I  L  H  I  K  M  L  S  *  M  D  *  K  F  S  S  *  T  T  P  M  E  T  S  P  C  R  I  L  K  F  S  F  R  I  I  H  H  Q  T  T  I  R  K  R  N  H  H  T  S  L  L  L  S  L  Q  W  L  L  L  A  E  L  L  C  F  Q  F  S  V  S  *  F  S  G  G  G  E  G  E  K  I  F  I  Q  A  L  Q  S  H  H  G  S  L  C  Q  L  H  R  T  Q  P  K  G  Q  A  A  H  A  H  H  H  Y  H  P  I  C  A  D  T  F  Y  *  K  R  *  K  L  Q  Q  A  I  L  M  K  N  L  *  L  V  M  E  V  L  V  M  C  T  K  G  T  *  T  T  V  Q  P  *  L  Q  S  R  G  *  I  L  H  Q  S  K  E  S  A  S  S  K  Q  R  F  T  C  C  Q  S  *  G  M  C  I  W  C  P  *  L  V  I  V  M  I  R  M  R  *  S  W  F  M  I  T  W  L  M  E  L  F  V  I  T  C  T  K  L  I  M  L  H  F  H  G  R  N  A  S  R  F  A  L  A  Q  Q  K  D  C  I  I  S  I  Q  :  V  K  R  I  S  S  F  I  E  M  *  S  Q  P  T  F  Y  W  M  I  N  G  L  L  R  F  Q  I  L  G  Y  P  K  S  V  H  L  V  D  Q  E  K  L  M  L  A  L  L  *  K  E  A  L  D  I  *  I  L  N  T  I  S  D  N  S  *  Q  K  N  L  M  C  I  L  L  G  *  C  Y  S  K  C  C  V  L  D  Q  H  *  F  L  T  C  R  K  G  K  *  I  W  L  I  G  L  V  G  A  V  K  K  E  I  F  N  K  *  L  I  Q  I  W  K  D  K  S  R  Q  S  A  *  T  S  L  Q  K  Q  H  T  I  A  *  R  I  K  E  S  K  G  H  Q  *  M  T  L  F  G  I  W  N  L  Y  *  S  F  K  K  Q  L  I  I  E  V  T  K  W  N  *  T  V  I  R  L  A  R  L  S  H  *  L  *  M  I  I  P  I  Y  L  Q  M  K  D  S  R  N  F  Q  V  Q  M  K  L  E  K  N  T  Q  A  V  L  H  P  *  P  Q  L  V  M  T  N  *  R  V  K  P  F  S  L  R  F  *  I  H  R  D  D  E  I  V  T  T  S  M  I  N  I  T  Y  *  F  F  S  V  S  F  F  V  C  *  I  Y  V  L  I  I  C  G  *  *  T  E  A  I  I  Q  K  Y  I  S  Y  K  I  L  S  L  Y  F  V  E   </first_frame>
            <second_frame>  *  P  R  F  C  I  S  K  C  Y  L  K  W  I  R  N  F  Q  V  E  R  L  Q  W  K  P  L  R  A  E  S  *  S  F  L  S  E  *  F  T  T  K  Q  Q  *  E  K  E  I  I  T  H  H  C  C  Y  H  C  S  G  C  Y  *  R  N  C  S  V  F  N  S  L  F  L  D  F  P  A  V  E  K  G  K  R  S  S  Y  K  R  Y  K  V  I  M  D  P  F  V  N  Y  I  G  L  N  P  K  D  R  R  L  T  L  I  I  T  T  I  R  S  V  P  T  L  F  T  R  R  D  K  N  C  N  R  Q  F  *  *  K  I  C  D  W  L  W  R  F  W  *  C  V  Q  R  V  H  R  Q  R  C  N  H  S  C  S  Q  E  V  E  S  F  I  K  A  R  S  P  R  V  R  N  R  D  S  H  A  V  K  A  K  A  C  A  S  G  V  L  N  W  L  L  *  *  *  E  *  D  D  L  G  L  *  L  H  G  *  W  N  S  S  *  S  L  V  Q  N  *  *  C  S  T  S  M  E  E  T  P  R  D  L  H  W  R  S  K  R  I  A  L  S  P  Y  R :   *  K  G  Y  H  H  S  S  R  C  E  V  N  Q  H  F  I  G  *  *  M  G  C  *  G  F  R  F  W  V  I  Q  N  R  S  T  *  W  I  R  K  N  S  C  *  H  C  C  E  R  K  L  W  I  S  R  S  *  I  L  *  A  T  T  V  D  R  K  I  *  C  V  F  F  W  G  S  A  I  R  S  V  V  C  *  T  S  I  N  S  *  H  A  E  R  A  S  E  F  G  *  L  G  L  *  E  L  *  K  R  K  S  S  T  N  N  *  S  K  F  G  R  T  N  R  A  R  V  L  K  Q  V  C  R  S  S  I  Q  L  L  E  G  S  R  S  P  K  A  I  N  E  *  R  C  L  E  F  G  I  Y  I  K  A  S  R  S  S  *  *  *  R  S  Q  N  G  I  E  Q  L  S  D  *  P  V  F  P  I  D  Y  E  *  S  Y  Q  Y  I  Y  R  *  R  I  R  G  I  F  R  F  K  *  S  W  R  K  I  H  K  Q  C  F  I  H  D  H  N  *  *  *  Q  I  E  E  *  N  H  F  L  *  D  F  E  S  I  G  T  M  R  L  L  Q  L  V  *  *  I  L  H  I  S  S  S  L  F  P  F  S  S  V  E  F  M  S  L  L  Y  V  D  D  E  L  K  P  L  F  R  S  I  *  A  I  K  Y  F  H  Y  I  L  L  S  </second_frame>
            <third_frame>   N  P  D  S  A  Y  Q  N  A  I  L  N  G  L  E  I  F  K  L  N  D  S  N  G  N  L  S  V  P  N  P  E  V  F  F  P  N  N  S  P  P  N  N  N  K  K  K  K  S  S  H  I  I  A  V  I  T  A  V  A  V  I  S  G  I  A  L  F  S  I  L  C  F  L  I  F  R  R  W  R  R  G  K  D  L  H  T  S  V  T  K  S  S  W  I  P  L  S  I  T  S  D  S  T  Q  R  T  G  G  S  R  S  S  S  L  P  S  D  L  C  R  H  F  L  L  E  E  I  K  T  A  T  G  N  F  D  E  K  F  V  I  G  Y  G  G  F  G  N  V  Y  K  G  Y  I  D  N  G  A  T  I  V  A  V  K  R  L  N  P  S  S  K  Q  G  V  R  E  F  E  T  E  I  H  M  L  S  K  L  R  H  V  H  L  V  S  L  I  G  Y  C  D  D  K  N  E  M  I  L  V  Y  D  Y  M  A  N  G  T  L  R  D  H  L  Y  K  T  D  N  A  P  L  P  W  K  K  R  L  E  I  C  I  G  A  A  K  G  L  H  Y  L  H  T   : G  K  K  D  I  I  I  H  R  D  V  K  S  T  N  I  L  L  D  D  K  W  V  A  K  V  S  D  F  G  L  S  K  I  G  P  L  S  G  S  G  K  T  H  V  S  T  V  V  K  G  S  F  G  Y  L  D  P  E  Y  Y  K  R  Q  Q  L  T  E  K  S  D  V  Y  S  F  G  V  V  L  F  E  V  L  C  A  R  P  A  L  I  P  N  M  P  K  G  Q  V  N  L  A  D  W  A  C  R  S  C  K  K  G  N  L  Q  Q  I  I  D  P  N  L  E  G  Q  I  A  P  E  C  L  N  K  F  A  E  A  A  Y  N  C  L  K  D  Q  G  V  Q  R  P  S  M  N  D  V  V  W  N  L  E  F  I  L  K  L  Q  E  A  A  D  N  R  G  H  K  M  E  L  N  S  Y  P  T  S  P  S  F  P  L  I  M  N  D  H  T  N  I  S  T  D  E  G  F  E  E  F  S  G  S  N  E  V  G  E  K  Y  T  S  S  A  S  S  M  T  T  T  S  D  D  K  L  K  S  E  T  I  F  S  E  I  L  N  P  S  G  R  *  D  C  Y  N  *  Y  D  K  Y  Y  I  L  V  L  L  C  F  L  F  R  L  L  N  L  C  P  Y  Y  M  W  M  M  N  *  S  H  Y  S  E  V  Y  K  L  *  N  T  F  I  I  F  C  *  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16111" stop="15361"/>
                    <exon start="15211" stop="14475"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1485</number_coding_nucleotides>
                  <number_encoded_amino_acids>495</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPDSAYQNAILNGLEIFKLNDSNGNLSVPNPEVFFPNNSPPNNNKKKKSSHIIAVITAVAVISGIALFSILCFLIFRRWRRGKDLHTSVTKSSWIPLSITSDSTQRTGGSRSSSLPSDLCRHFLLEEIKTATGNFDEKFVIGYGGFGNVYKGYIDNGATIVAVKRLNPSSKQGVREFETEIHMLSKLRHVHLVSLIGYCDDKNEMILVYDYMANGTLRDHLYKTDNAPLPWKKRLEICIGAAKGLHYLHTGKKDIIIHRDVKSTNILLDDKWVAKVSDFGLSKIGPLSGSGKTHVSTVVKGSFGYLDPEYYKRQQLTEKSDVYSFGVVLFEVLCARPALIPNMPKGQVNLADWACRSCKKGNLQQIIDPNLEGQIAPECLNKFAEAAYNCLKDQGVQRPSMNDVVWNLEFILKLQEAADNRGHKMELNSYPTSPSFPLIMNDHTNISTDEGFEEFSGSNEVGEKYTSSASSMTTTSDDKLKSETIFSEILNPSGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="17291" PGL_stop="16363"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17291" e_stop="16363"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="17291" e_stop="16363" e_length="929"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17291" stop="16363"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566101" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTGTGTATAATTAATTGTTCCTTGGAACAGCTAATATCTCCTTACACCAACTCCCCATGGCAACCATCACTTTACTTTTCTTTCTCTTCTTACAACTCATAACCGCCACTATTGCTACCACGTCGCCACCGTATAACGCCACAGTCTTCGTCTTGCTTAACTGTGGCGCACAATCAGCCATCACCGATGATACTGGCCGTCGATGGGATACTGATACTCACTTTCCAAATTTCTTACCTTCCGACTTTTCAAGCATATCCACAACAGCCACAGCTCTTGAACAAGATCCTTCTGTCAATAGAATTCCTTATACGACTGGTATTCGTATTATGAGATCTCAATTCACCTATACTTTCCGTGTTACCCCTGGCACAATATTCCTCCGTCTCTATTTCTACCCTGCCAATTACTCCGGTTTTAACAAAGCTGATTCTTTTTTCTCCGTCACAGCTAATAATTTAACCCTCTTGAGTAACTTCAGTGCTTTCTTCACAGTCTCTGCAAGTAGTACTAAAGCTGTTCAAAAAGAATATGTCATCAATGTTGATGAAACACAGATGCTCAAATTAACCTTTTCTCCTTCACCAAACTCTTATGCTTTTGTTAATGGGATTGAGATACTTTCTATGCCAACTGATCTTTACATCCATGGAGACGTCAAATTGACTGGGAATACTATTCCATATAACATCAATAATAGCACTGCTCTTGAAACATTGTACAGGCTGAACGTGGGAGGCAATTTAGTTGAAAGCACAGAGGATACAGGGATGTATCGTGTATGGGATTCAGATAATGCATTTGTTGTTGGATTAGGCTATCAAACTCCTCATTTTCCTGATGCCAACATCACTTACACTTCTGAAACCCCGAATTATACTGCGCCAACCATAGTTTACACAACCTCGAGGATTATGGACAATTACA</gDNA_template>
            <first_frame> G  C  V  *  L  I  V  P  W  N  S  *  Y  L  L  T  P  T  P  H  G  N  H  H  F  T  F  L  S  L  L  T  T  H  N  R  H  Y  C  Y  H  V  A  T  V  *  R  H  S  L  R  L  A  *  L  W  R  T  I  S  H  H  R  *  Y  W  P  S  M  G  Y  *  Y  S  L  S  K  F  L  T  F  R  L  F  K  H  I  H  N  S  H  S  S  *  T  R  S  F  C  Q  *  N  S  L  Y  D  W  Y  S  Y  Y  E  I  S  I  H  L  Y  F  P  C  Y  P  W  H  N  I  P  P  S  L  F  L  P  C  Q  L  L  R  F  *  Q  S  *  F  F  F  L  R  H  S  *  *  F  N  P  L  E  *  L  Q  C  F  L  H  S  L  C  K  *  Y  *  S  C  S  K  R  I  C  H  Q  C  *  *  N  T  D  A  Q  I  N  L  F  S  F  T  K  L  L  C  F  C  *  W  D  *  D  T  F  Y  A  N  *  S  L  H  P  W  R  R  Q  I  D  W  E  Y  Y  S  I  *  H  Q  *  *  H  C  S  *  N  I  V  Q  A  E  R  G  R  Q  F  S  *  K  H  R  G  Y  R  D  V  S  C  M  G  F  R  *  C  I  C  C  W  I  R  L  S  N  S  S  F  S  *  C  Q  H  H  L  H  F  *  N  P  E  L  Y  C  A  N  H  S  L  H  N  L  E  D  Y  G  Q  L   </first_frame>
            <second_frame>  V  V  Y  N  *  L  F  L  G  T  A  N  I  S  L  H  Q  L  P  M  A  T  I  T  L  L  F  F  L  F  L  Q  L  I  T  A  T  I  A  T  T  S  P  P  Y  N  A  T  V  F  V  L  L  N  C  G  A  Q  S  A  I  T  D  D  T  G  R  R  W  D  T  D  T  H  F  P  N  F  L  P  S  D  F  S  S  I  S  T  T  A  T  A  L  E  Q  D  P  S  V  N  R  I  P  Y  T  T  G  I  R  I  M  R  S  Q  F  T  Y  T  F  R  V  T  P  G  T  I  F  L  R  L  Y  F  Y  P  A  N  Y  S  G  F  N  K  A  D  S  F  F  S  V  T  A  N  N  L  T  L  L  S  N  F  S  A  F  F  T  V  S  A  S  S  T  K  A  V  Q  K  E  Y  V  I  N  V  D  E  T  Q  M  L  K  L  T  F  S  P  S  P  N  S  Y  A  F  V  N  G  I  E  I  L  S  M  P  T  D  L  Y  I  H  G  D  V  K  L  T  G  N  T  I  P  Y  N  I  N  N  S  T  A  L  E  T  L  Y  R  L  N  V  G  G  N  L  V  E  S  T  E  D  T  G  M  Y  R  V  W  D  S  D  N  A  F  V  V  G  L  G  Y  Q  T  P  H  F  P  D  A  N  I  T  Y  T  S  E  T  P  N  Y  T  A  P  T  I  V  Y  T  T  S  R  I  M  D  N  Y  </second_frame>
            <third_frame>   L  C  I  I  N  C  S  L  E  Q  L  I  S  P  Y  T  N  S  P  W  Q  P  S  L  Y  F  S  F  S  S  Y  N  S  *  P  P  L  L  L  P  R  R  H  R  I  T  P  Q  S  S  S  C  L  T  V  A  H  N  Q  P  S  P  M  I  L  A  V  D  G  I  L  I  L  T  F  Q  I  S  Y  L  P  T  F  Q  A  Y  P  Q  Q  P  Q  L  L  N  K  I  L  L  S  I  E  F  L  I  R  L  V  F  V  L  *  D  L  N  S  P  I  L  S  V  L  P  L  A  Q  Y  S  S  V  S  I  S  T  L  P  I  T  P  V  L  T  K  L  I  L  F  S  P  S  Q  L  I  I  *  P  S  *  V  T  S  V  L  S  S  Q  S  L  Q  V  V  L  K  L  F  K  K  N  M  S  S  M  L  M  K  H  R  C  S  N  *  P  F  L  L  H  Q  T  L  M  L  L  L  M  G  L  R  Y  F  L  C  Q  L  I  F  T  S  M  E  T  S  N  *  L  G  I  L  F  H  I  T  S  I  I  A  L  L  L  K  H  C  T  G  *  T  W  E  A  I  *  L  K  A  Q  R  I  Q  G  C  I  V  Y  G  I  Q  I  M  H  L  L  L  D  *  A  I  K  L  L  I  F  L  M  P  T  S  L  T  L  L  K  P  R  I  I  L  R  Q  P  *  F  T  Q  P  R  G  L  W  T  I  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17275" stop="16364"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>912</number_coding_nucleotides>
                  <number_encoded_amino_acids>304</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFLGTANISLHQLPMATITLLFFLFLQLITATIATTSPPYNATVFVLLNCGAQSAITDDTGRRWDTDTHFPNFLPSDFSSISTTATALEQDPSVNRIPYTTGIRIMRSQFTYTFRVTPGTIFLRLYFYPANYSGFNKADSFFSVTANNLTLLSNFSAFFTVSASSTKAVQKEYVINVDETQMLKLTFSPSPNSYAFVNGIEILSMPTDLYIHGDVKLTGNTIPYNINNSTALETLYRLNVGGNLVESTEDTGMYRVWDSDNAFVVGLGYQTPHFPDANITYTSETPNYTAPTIVYTTSRIMDNY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="24067" PGL_stop="24304"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24067" e_stop="24304"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="24067" e_stop="24304" e_length="238"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24067" stop="24304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602810" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATCCCCCGCCGCGTTCAAAGATAGACGCTCCTTTTTAGCATTACCAGCAAGAATCATAGTGCTTGTATGTGATTCCATCAAGAATTCATCAACATCATCTGGTGCTATGTTGCTCTTTGTCCCATTACATTCTAATGCTCCAATTACTTGTTGCACCTTTATTATGGTGACAACTAGTACAATTAGGAGCATCTTCTTGTAACATTTTCTTTCCATGCTTAATATTAGTATATTGGA</gDNA_template>
            <first_frame> Y  P  P  P  R  S  K  I  D  A  P  F  *  H  Y  Q  Q  E  S  *  C  L  Y  V  I  P  S  R  I  H  Q  H  H  L  V  L  C  C  S  L  S  H  Y  I  L  M  L  Q  L  L  V  A  P  L  L  W  *  Q  L  V  Q  L  G  A  S  S  C  N  I  F  F  P  C  L  I  L  V  Y  W  </first_frame>
            <second_frame>  I  P  R  R  V  Q  R  *  T  L  L  F  S  I  T  S  K  N  H  S  A  C  M  *  F  H  Q  E  F  I  N  I  I  W  C  Y  V  A  L  C  P  I  T  F  *  C  S  N  Y  L  L  H  L  Y  Y  G  D  N  *  Y  N  *  E  H  L  L  V  T  F  S  F  H  A  *  Y  *  Y  I  G </second_frame>
            <third_frame>   S  P  A  A  F  K  D  R  R  S  F  L  A  L  P  A  R  I  I  V  L  V  C  D  S  I  K  N  S  S  T  S  S  G  A  M  L  L  F  V  P  L  H  S  N  A  P  I  T  C  C  T  F  I  M  V  T  T  S  T  I  R  S  I  F  L  *  H  F  L  S  M  L  N  I  S  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24069" stop="24269"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPAAFKDRRSFLALPARIIVLVCDSIKNSSTSSGAMLLFVPLHSNAPITCCTFIMVTTSTIRSIFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="30838" PGL_stop="25164"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30838" e_stop="30604"/>
            <exon e_start="28455" e_stop="28326"/>
            <exon e_start="28102" e_stop="27964"/>
            <exon e_start="27882" e_stop="27670"/>
            <exon e_start="27590" e_stop="27452"/>
            <exon e_start="26902" e_stop="26752"/>
            <exon e_start="26672" e_stop="26563"/>
            <exon e_start="26486" e_stop="26389"/>
            <exon e_start="26273" e_stop="26204"/>
            <exon e_start="25976" e_stop="25520"/>
            <exon e_start="25263" e_stop="25164"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.968" e_score="0.996"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.524" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.187" acc_prob="0.729" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.021" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.992" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="30838" e_stop="30604" e_length="235"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.968">
            <gDNA_intron_boundary i_start="30603" i_stop="28456" i_length="2148"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28455" e_stop="28326" e_length="130"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28325" i_stop="28103" i_length="223"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28102" e_stop="27964" e_length="139"/>
          </exon>
          <intron i_serial="3" don_prob="0.954" acc_prob="0.989">
            <gDNA_intron_boundary i_start="27963" i_stop="27883" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27882" e_stop="27670" e_length="213"/>
          </exon>
          <intron i_serial="4" don_prob="0.965" acc_prob="0.524">
            <gDNA_intron_boundary i_start="27669" i_stop="27591" i_length="79"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27590" e_stop="27452" e_length="139"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="27451" i_stop="26903" i_length="549"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26902" e_stop="26752" e_length="151"/>
          </exon>
          <intron i_serial="6" don_prob="0.187" acc_prob="0.729">
            <gDNA_intron_boundary i_start="26751" i_stop="26673" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="26672" e_stop="26563" e_length="110"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="26562" i_stop="26487" i_length="76"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="26486" e_stop="26389" e_length="98"/>
          </exon>
          <intron i_serial="8" don_prob="0.021" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26388" i_stop="26274" i_length="115"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="26273" e_stop="26204" e_length="70"/>
          </exon>
          <intron i_serial="9" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26203" i_stop="25977" i_length="227"/>
          </intron>
          <exon e_serial="10" e_score="0.996">
            <gDNA_exon_boundary e_start="25976" e_stop="25520" e_length="457"/>
          </exon>
          <intron i_serial="10" don_prob="0.979" acc_prob="0.992">
            <gDNA_intron_boundary i_start="25519" i_stop="25264" i_length="256"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="25263" e_stop="25164" e_length="100"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30838" stop="30604"/>
              <exon start="28455" stop="28326"/>
              <exon start="28102" stop="27964"/>
              <exon start="27882" stop="27670"/>
              <exon start="27590" stop="27452"/>
              <exon start="26902" stop="26752"/>
              <exon start="26672" stop="26563"/>
              <exon start="26486" stop="26389"/>
              <exon start="26273" stop="26204"/>
              <exon start="25976" stop="25520"/>
              <exon start="25263" stop="25164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584343" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATTACCCTTGGTCTTATTGGCGACTCTCCAACTTTACCCCTATCTAGGGTTTTTTCTTCTCTCCCGACTAAGAGAGTTCTCCGCTGCGCTGCTTGCTGTTCACACTCTCTATCTCTTGGGAAATTTCGCGGGCGAGGAAAATGACGACTGTGGTTCCTACTTCTGAGGAAGATCCCGTCCTCTCCGTCGTCCGGTTTACGGCAGAGATGTCATGGGCGGACGCCGGCGCCGAG : ACTGCAGAGCCTGAAGTTAATAGATTGTGTGTCGAGGCCCAGAAATGCATGATTGAAGGAAGGTGGTTGGATTTGGTTTCGCTTATGCTCGCTTCTGCAGATATAATATTTTCTAAAGCTTCTGAAAAAG : ATCTTGAGTGCGTTTTCACAATAATGTGCAACCTTGTCAAGAAGCCTGAGAGCTTGGACCAAGTACATGAGATGGCAGAGCTCATATCCGCTAAAATCATTCAACAACCCAATGATAAACCCGCATTGCGCTTGAAAAT : CTTGTTCAATCTCTACAATCTGTTGGAGAACCCATACAGCCGTTTCTGCGTTTACTTGAAGTCCCTCAAGTTGGCCACTGCCGGGAAGGTTACTGAACACATTTTGTCGTCCATCAAAATGATGGATAACTTCTTGAAGGAGTGGAATCTTGGAGTCAAAGATCAGAGAGAGCTGTTTCTTGCAATCTCCAACATTTTAAAGGAAAGCAAAGG : CTCTACAAAAGATTCTTTCATGTTTCTTACAAAGTATCTGGAAACCTTTTCGTCTGAAGATGCTTCTAATATGACTGAGGCTAAGGAAGAAGCTGCCAGTGCAATTGTCGATTTTGTCAGATCACCTGATATGTTTAAG : TGTGACTTGCTAGATATGCCGGCTATAGTCCAGTTGGAGAAAGATGGTCAATATGGTCCAGTATATCAACTTCTGAAGATCTTTCTCACTCAGAGGCTGGATGCTTACTTGGAATTTGAGGCAGCAAATTCAGCATTATTAAAAACCTATG : GACTTGTCCATGATGACTGTATATCAAAGATGAGGTTGATGTCGTTGGTAGATCTTGGCTTGAATGAATCTAGTCAAATTCCTTATTCTGTCATCAAACAGGCATTGCAG : ATTGATGACATTGAGGTAGAATCGTGGGTTGTTAAGGCAATTACAGCTAAGTTACTTGATTGCAAGATTGATCAAATGAATCAAGTAGTAATAGTGAG : CCGATGTACGGAGCGTGTGTTTGGTGTGCATCAGTGGCAAGATCTCCGCACGAAACTAGTGACTTGGAGG : GGCAACATTGCTGGTGTTATCAGCACAGTTCAAGCCAATAAGATTACAGAAGATAGCACACAGGCAGTGCAAGGTTTAGCAATCCGCTGAGTGTTCTTTGTGGAAATCTCTTTTTAATTTTAGAGATCGGATTTAATTGGGATATACTGTTCACATCTTTTTCAGCTTGAAATTTTGATCATCTTTTTTTTTTTGGGCAAAAATATACCATTTGTTAAATTACAGTAGCCATTTTTATTTTGTCCGTCGAGGTTTCGGGCTGTATTTCAATTTGACGACTGTCTTTGCTTTGTACTTTTAAGTTGACTCCAGTATTTGGAAATAGGTTATGTTGCCCCCCAAATTCACTTGTTAGGATATCATACCAGAAGGAATTCCTTGCGGGCTGGAACAATTCACTCTTAATGAATTCCAGTTCAGATCAGGTGTTATGATTCGACGCAAATGTCAACTTTTG : GTCCTGTTTGGCCATGCGATTGGTATCATGACGAGAAATCGTAATATCTACAGTAAGTTGTAAAATTATTAGAATAATATCAATTTTTTATTTTTTAGTC</gDNA_template>
            <first_frame> R  L  P  L  V  L  L  A  T  L  Q  L  Y  P  Y  L  G  F  F  L  L  S  R  L  R  E  F  S  A  A  L  L  A  V  H  T  L  Y  L  L  G  N  F  A  G  E  E  N  D  D  C  G  S  Y  F  *  G  R  S  R  P  L  R  R  P  V  Y  G  R  D  V  M  G  G  R  R  R  R   : D  C  R  A  *  S  *  *  I  V  C  R  G  P  E  M  H  D  *  R  K  V  V  G  F  G  F  A  Y  A  R  F  C  R  Y  N  I  F  *  S  F  *  K  R :   S  *  V  R  F  H  N  N  V  Q  P  C  Q  E  A  *  E  L  G  P  S  T  *  D  G  R  A  H  I  R  *  N  H  S  T  T  Q  *  *  T  R  I  A  L  E  N  :  L  V  Q  S  L  Q  S  V  G  E  P  I  Q  P  F  L  R  L  L  E  V  P  Q  V  G  H  C  R  E  G  Y  *  T  H  F  V  V  H  Q  N  D  G  *  L  L  E  G  V  E  S  W  S  Q  R  S  E  R  A  V  S  C  N  L  Q  H  F  K  G  K  Q  R  :  L  Y  K  R  F  F  H  V  S  Y  K  V  S  G  N  L  F  V  *  R  C  F  *  Y  D  *  G  *  G  R  S  C  Q  C  N  C  R  F  C  Q  I  T  *  Y  V  *   : V  *  L  A  R  Y  A  G  Y  S  P  V  G  E  R  W  S  I  W  S  S  I  S  T  S  E  D  L  S  H  S  E  A  G  C  L  L  G  I  *  G  S  K  F  S  I  I  K  N  L  W :   T  C  P  *  *  L  Y  I  K  D  E  V  D  V  V  G  R  S  W  L  E  *  I  *  S  N  S  L  F  C  H  Q  T  G  I  A   : D  *  *  H  *  G  R  I  V  G  C  *  G  N  Y  S  *  V  T  *  L  Q  D  *  S  N  E  S  S  S  N  S  E  :  P  M  Y  G  A  C  V  W  C  A  S  V  A  R  S  P  H  E  T  S  D  L  E   : G  Q  H  C  W  C  Y  Q  H  S  S  S  Q  *  D  Y  R  R  *  H  T  G  S  A  R  F  S  N  P  L  S  V  L  C  G  N  L  F  L  I  L  E  I  G  F  N  W  D  I  L  F  T  S  F  S  A  *  N  F  D  H  L  F  F  F  G  Q  K  Y  T  I  C  *  I  T  V  A  I  F  I  L  S  V  E  V  S  G  C  I  S  I  *  R  L  S  L  L  C  T  F  K  L  T  P  V  F  G  N  R  L  C  C  P  P  N  S  L  V  R  I  S  Y  Q  K  E  F  L  A  G  W  N  N  S  L  L  M  N  S  S  S  D  Q  V  L  *  F  D  A  N  V  N  F  W :   S  C  L  A  M  R  L  V  S  *  R  E  I  V  I  S  T  V  S  C  K  I  I  R  I  I  S  I  F  Y  F  L  V </first_frame>
            <second_frame>  D  Y  P  W  S  Y  W  R  L  S  N  F  T  P  I  *  G  F  F  F  S  P  D  *  E  S  S  P  L  R  C  L  L  F  T  L  S  I  S  W  E  I  S  R  A  R  K  M  T  T  V  V  P  T  S  E  E  D  P  V  L  S  V  V  R  F  T  A  E  M  S  W  A  D  A  G  A  E  :  T  A  E  P  E  V  N  R  L  C  V  E  A  Q  K  C  M  I  E  G  R  W  L  D  L  V  S  L  M  L  A  S  A  D  I  I  F  S  K  A  S  E  K   : D  L  E  C  V  F  T  I  M  C  N  L  V  K  K  P  E  S  L  D  Q  V  H  E  M  A  E  L  I  S  A  K  I  I  Q  Q  P  N  D  K  P  A  L  R  L  K  I :   L  F  N  L  Y  N  L  L  E  N  P  Y  S  R  F  C  V  Y  L  K  S  L  K  L  A  T  A  G  K  V  T  E  H  I  L  S  S  I  K  M  M  D  N  F  L  K  E  W  N  L  G  V  K  D  Q  R  E  L  F  L  A  I  S  N  I  L  K  E  S  K  G :   S  T  K  D  S  F  M  F  L  T  K  Y  L  E  T  F  S  S  E  D  A  S  N  M  T  E  A  K  E  E  A  A  S  A  I  V  D  F  V  R  S  P  D  M  F  K  :  C  D  L  L  D  M  P  A  I  V  Q  L  E  K  D  G  Q  Y  G  P  V  Y  Q  L  L  K  I  F  L  T  Q  R  L  D  A  Y  L  E  F  E  A  A  N  S  A  L  L  K  T  Y   : G  L  V  H  D  D  C  I  S  K  M  R  L  M  S  L  V  D  L  G  L  N  E  S  S  Q  I  P  Y  S  V  I  K  Q  A  L  Q  :  I  D  D  I  E  V  E  S  W  V  V  K  A  I  T  A  K  L  L  D  C  K  I  D  Q  M  N  Q  V  V  I  V  S :   R  C  T  E  R  V  F  G  V  H  Q  W  Q  D  L  R  T  K  L  V  T  W  R  :  G  N  I  A  G  V  I  S  T  V  Q  A  N  K  I  T  E  D  S  T  Q  A  V  Q  G  L  A  I  R  *  V  F  F  V  E  I  S  F  *  F  *  R  S  D  L  I  G  I  Y  C  S  H  L  F  Q  L  E  I  L  I  I  F  F  F  L  G  K  N  I  P  F  V  K  L  Q  *  P  F  L  F  C  P  S  R  F  R  A  V  F  Q  F  D  D  C  L  C  F  V  L  L  S  *  L  Q  Y  L  E  I  G  Y  V  A  P  Q  I  H  L  L  G  Y  H  T  R  R  N  S  L  R  A  G  T  I  H  S  *  *  I  P  V  Q  I  R  C  Y  D  S  T  Q  M  S  T  F   : G  P  V  W  P  C  D  W  Y  H  D  E  K  S  *  Y  L  Q  *  V  V  K  L  L  E  *  Y  Q  F  F  I  F  *   </second_frame>
            <third_frame>   I  T  L  G  L  I  G  D  S  P  T  L  P  L  S  R  V  F  S  S  L  P  T  K  R  V  L  R  C  A  A  C  C  S  H  S  L  S  L  G  K  F  R  G  R  G  K  *  R  L  W  F  L  L  L  R  K  I  P  S  S  P  S  S  G  L  R  Q  R  C  H  G  R  T  P  A  P  R :   L  Q  S  L  K  L  I  D  C  V  S  R  P  R  N  A  *  L  K  E  G  G  W  I  W  F  R  L  C  S  L  L  Q  I  *  Y  F  L  K  L  L  K  K  :  I  L  S  A  F  S  Q  *  C  A  T  L  S  R  S  L  R  A  W  T  K  Y  M  R  W  Q  S  S  Y  P  L  K  S  F  N  N  P  M  I  N  P  H  C  A  *  K   : S  C  S  I  S  T  I  C  W  R  T  H  T  A  V  S  A  F  T  *  S  P  S  S  W  P  L  P  G  R  L  L  N  T  F  C  R  P  S  K  *  W  I  T  S  *  R  S  G  I  L  E  S  K  I  R  E  S  C  F  L  Q  S  P  T  F  *  R  K  A  K   : A  L  Q  K  I  L  S  C  F  L  Q  S  I  W  K  P  F  R  L  K  M  L  L  I  *  L  R  L  R  K  K  L  P  V  Q  L  S  I  L  S  D  H  L  I  C  L  S :   V  T  C  *  I  C  R  L  *  S  S  W  R  K  M  V  N  M  V  Q  Y  I  N  F  *  R  S  F  S  L  R  G  W  M  L  T  W  N  L  R  Q  Q  I  Q  H  Y  *  K  P  M  :  D  L  S  M  M  T  V  Y  Q  R  *  G  *  C  R  W  *  I  L  A  *  M  N  L  V  K  F  L  I  L  S  S  N  R  H  C  R :   L  M  T  L  R  *  N  R  G  L  L  R  Q  L  Q  L  S  Y  L  I  A  R  L  I  K  *  I  K  *  *  *  *   : A  D  V  R  S  V  C  L  V  C  I  S  G  K  I  S  A  R  N  *  *  L  G  G :   A  T  L  L  V  L  S  A  Q  F  K  P  I  R  L  Q  K  I  A  H  R  Q  C  K  V  *  Q  S  A  E  C  S  L  W  K  S  L  F  N  F  R  D  R  I  *  L  G  Y  T  V  H  I  F  F  S  L  K  F  *  S  S  F  F  F  W  A  K  I  Y  H  L  L  N  Y  S  S  H  F  Y  F  V  R  R  G  F  G  L  Y  F  N  L  T  T  V  F  A  L  Y  F  *  V  D  S  S  I  W  K  *  V  M  L  P  P  K  F  T  C  *  D  I  I  P  E  G  I  P  C  G  L  E  Q  F  T  L  N  E  F  Q  F  R  S  G  V  M  I  R  R  K  C  Q  L  L  :  V  L  F  G  H  A  I  G  I  M  T  R  N  R  N  I  Y  S  K  L  *  N  Y  *  N  N  I  N  F  L  F  F  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30765" stop="30604"/>
                    <exon start="28455" stop="28326"/>
                    <exon start="28102" stop="27964"/>
                    <exon start="27882" stop="27670"/>
                    <exon start="27590" stop="27452"/>
                    <exon start="26902" stop="26752"/>
                    <exon start="26672" stop="26563"/>
                    <exon start="26486" stop="26389"/>
                    <exon start="26273" stop="26204"/>
                    <exon start="25976" stop="25887"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1299</number_coding_nucleotides>
                  <number_encoded_amino_acids>433</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESSPLRCLLFTLSISWEISRARKMTTVVPTSEEDPVLSVVRFTAEMSWADAGAETAEPEVNRLCVEAQKCMIEGRWLDLVSLMLASADIIFSKASEKDLECVFTIMCNLVKKPESLDQVHEMAELISAKIIQQPNDKPALRLKILFNLYNLLENPYSRFCVYLKSLKLATAGKVTEHILSSIKMMDNFLKEWNLGVKDQRELFLAISNILKESKGSTKDSFMFLTKYLETFSSEDASNMTEAKEEAASAIVDFVRSPDMFKCDLLDMPAIVQLEKDGQYGPVYQLLKIFLTQRLDAYLEFEAANSALLKTYGLVHDDCISKMRLMSLVDLGLNESSQIPYSVIKQALQIDDIEVESWVVKAITAKLLDCKIDQMNQVVIVSRCTERVFGVHQWQDLRTKLVTWRGNIAGVISTVQANKITEDSTQAVQGLAIR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="35189" PGL_stop="36274"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35189" e_stop="35399"/>
            <exon e_start="36126" e_stop="36274"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="35189" e_stop="35399" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="35400" i_stop="36125" i_length="726"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="36126" e_stop="36274" e_length="149"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35189" stop="35399"/>
              <exon start="36126" stop="36274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569748" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGAAAAAGTGTGTTTTTAACTCGCATGATACAGAAATAATGGGTAATACAGCATTCAGCACTTACATAGCAGTTTGAATCCAGTGTCAATTAGACACTATTACAATTGTGAAAAGAAGTTTCAAATTTGCAGTAAACGAAATCCATTCATACTTTCAACATAACTGGGAAAGCAAACTTTTGAAACTTGATGTCCAGTGACATCACTTG : CTGGCCTTGAGACAGGCTCATTAGTCGGAGCCTTTTCCTGGTTGCGAGCAGTCTGAGAATTGTTAGCAGGCTCTCCACTTCCAAACAGGTAGCCCAAGGAACTCTGACCGCCCCCAGCACTCACTCCGCGGCCCATCCTTAACGATTAA</gDNA_template>
            <first_frame> K  E  K  V  C  F  *  L  A  *  Y  R  N  N  G  *  Y  S  I  Q  H  L  H  S  S  L  N  P  V  S  I  R  H  Y  Y  N  C  E  K  K  F  Q  I  C  S  K  R  N  P  F  I  L  S  T  *  L  G  K  Q  T  F  E  T  *  C  P  V  T  S  L   : A  G  L  E  T  G  S  L  V  G  A  F  S  W  L  R  A  V  *  E  L  L  A  G  S  P  L  P  N  R  *  P  K  E  L  *  P  P  P  A  L  T  P  R  P  I  L  N  D  * </first_frame>
            <second_frame>  K  K  K  C  V  F  N  S  H  D  T  E  I  M  G  N  T  A  F  S  T  Y  I  A  V  *  I  Q  C  Q  L  D  T  I  T  I  V  K  R  S  F  K  F  A  V  N  E  I  H  S  Y  F  Q  H  N  W  E  S  K  L  L  K  L  D  V  Q  *  H  H  L  :  L  A  L  R  Q  A  H  *  S  E  P  F  P  G  C  E  Q  S  E  N  C  *  Q  A  L  H  F  Q  T  G  S  P  R  N  S  D  R  P  Q  H  S  L  R  G  P  S  L  T  I   </second_frame>
            <third_frame>   R  K  S  V  F  L  T  R  M  I  Q  K  *  W  V  I  Q  H  S  A  L  T  *  Q  F  E  S  S  V  N  *  T  L  L  Q  L  *  K  E  V  S  N  L  Q  *  T  K  S  I  H  T  F  N  I  T  G  K  A  N  F  *  N  L  M  S  S  D  I  T  C :   W  P  *  D  R  L  I  S  R  S  L  F  L  V  A  S  S  L  R  I  V  S  R  L  S  T  S  K  Q  V  A  Q  G  T  L  T  A  P  S  T  H  S  A  A  H  P  *  R  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="46787" PGL_stop="41444"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46787" e_stop="46299"/>
            <exon e_start="44843" e_stop="44607"/>
            <exon e_start="43772" e_stop="43629"/>
            <exon e_start="42657" e_stop="42526"/>
            <exon e_start="41924" e_stop="41444"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="0.996"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.649" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="46787" e_stop="46299" e_length="489"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="46298" i_stop="44844" i_length="1455"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44843" e_stop="44607" e_length="237"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="44606" i_stop="43773" i_length="834"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="43772" e_stop="43629" e_length="144"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.649">
            <gDNA_intron_boundary i_start="43628" i_stop="42658" i_length="971"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42657" e_stop="42526" e_length="132"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.991">
            <gDNA_intron_boundary i_start="42525" i_stop="41925" i_length="601"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="41924" e_stop="41444" e_length="481"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46787" stop="46299"/>
              <exon start="44843" stop="44607"/>
              <exon start="43772" stop="43629"/>
              <exon start="42657" stop="42526"/>
              <exon start="41924" stop="41444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585924" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGGTATTGCTAACCATCTTCATCTCTCTCAACTCTCAACTGCTTTGGGAAAGCATCAAATACTTGTACGTATACGTAATTCTTATTGTACATATCTCTGTAAATCTGTTGCATGTGAATATCAATCAATCAGAAATGGGCATGTGTTTATCACGGAGTTCCGGCCCCGTGAAGAAGCGGCAATCCAAACGTTTAACGAATCAATCGGCGGCCGCCGTTAATGGCGGTGGGAGCAACAGGTGGTCTAGGAATCGATCGTCTAAGAGAGACGATTCCATCATTCAGGAGCGAGCTCTCGCCGCCGCGATTCTCCTACAGCAGCAAATGCAAAACGGCGGAGGAGGTGGTGCTGCTCCTTTTGATCGTTCAGCTTCGCTTCGGTATCCGAATTCGAATTCTAAGAAGAATCAACCTCTACCGCGTTCCTCAAGCTCTAGGGCTCGCTCTCTTACTGATCCTCTTCTTCAGCCTCACCAGCTTGTGAACCAG : GAAGTGAAGGTTGATGATTTAGAGACGAACCATTTCGTCCTCGTTCATGGTGGTGGATTTGGGGCCTGGTGTTGGTATAAAACCATTGCACTTTTAGAAGAAGCTGGATTTAAAGTTACTGCAGTTGATTTAACCGGTTCAGGCATTCATTCTTTCGACACAAATAGCATCGCAAGCCTATCGCAATATGTACAGCCGCTCACTGATTTTCTTGAGAAGCTTGCTGATGGAGAAAAG : GTGATTTTGGTGGGACATGATTTTGGCGGTGCCTGTATATCCTTTGCGATGGAGCGCCATCCCCTTAAGGTTTCGAAAGCTGTGTTTGTTGCTGCTGCAATGCTCACTAGTGGACAAAGTGCCCTTGATATGTTCTCACAAAAG : ACAGATTCAAATGACCTTATGAGACAGTCTCAAATATTTATTTATGCCAATGGGAACGACAAGCCTCCAACTGCTATTGATTTGGACAAGTCACTCCTCAGGGACTTGTTATTCAACCATAGTCCTGCTAAG : GATGTTGCATTAGCATCTGTGTCAATGAGGCCAATTCCCTTTTCCCCAGTTTTGGAGAAGCTTTGTCTATCCGACTCCAAGTATGGTTGTGTTAGGCGGTTTTATGTAGAAACGACAGAAGATAATGCGATACCAAAAGCCTTACAGCAGAATCTAATTAGCAATAATCCTCCAGAACAAGTTTTTCATCTCAAGGGTGCTGATCACTCGCCTTTTTTCTCCAAGCCTCAAGGTCTACATAGGATACTGGTAGAGATCTCCAGGATTCCATAAACTTGGAAGTTGTTTTGCTGAATTCCTTATTATTAGAAAAGTCACACCGACACAAATGTAGCAAAGTTATTGTTGTGTAAATTAACCATGTGGAATGCCTATTGGTGTACATGTTCGGTTTATCCAATTACTTTGTTCCATTTGCTATACTTGAGACAGTGAGAATTCCCTTTACTCGGGAAAAAGAATGCTTTAAGATTTGAATGTC</gDNA_template>
            <first_frame> V  V  L  L  T  I  F  I  S  L  N  S  Q  L  L  W  E  S  I  K  Y  L  Y  V  Y  V  I  L  I  V  H  I  S  V  N  L  L  H  V  N  I  N  Q  S  E  M  G  M  C  L  S  R  S  S  G  P  V  K  K  R  Q  S  K  R  L  T  N  Q  S  A  A  A  V  N  G  G  G  S  N  R  W  S  R  N  R  S  S  K  R  D  D  S  I  I  Q  E  R  A  L  A  A  A  I  L  L  Q  Q  Q  M  Q  N  G  G  G  G  G  A  A  P  F  D  R  S  A  S  L  R  Y  P  N  S  N  S  K  K  N  Q  P  L  P  R  S  S  S  S  R  A  R  S  L  T  D  P  L  L  Q  P  H  Q  L  V  N  Q  :  E  V  K  V  D  D  L  E  T  N  H  F  V  L  V  H  G  G  G  F  G  A  W  C  W  Y  K  T  I  A  L  L  E  E  A  G  F  K  V  T  A  V  D  L  T  G  S  G  I  H  S  F  D  T  N  S  I  A  S  L  S  Q  Y  V  Q  P  L  T  D  F  L  E  K  L  A  D  G  E  K  :  V  I  L  V  G  H  D  F  G  G  A  C  I  S  F  A  M  E  R  H  P  L  K  V  S  K  A  V  F  V  A  A  A  M  L  T  S  G  Q  S  A  L  D  M  F  S  Q  K  :  T  D  S  N  D  L  M  R  Q  S  Q  I  F  I  Y  A  N  G  N  D  K  P  P  T  A  I  D  L  D  K  S  L  L  R  D  L  L  F  N  H  S  P  A  K  :  D  V  A  L  A  S  V  S  M  R  P  I  P  F  S  P  V  L  E  K  L  C  L  S  D  S  K  Y  G  C  V  R  R  F  Y  V  E  T  T  E  D  N  A  I  P  K  A  L  Q  Q  N  L  I  S  N  N  P  P  E  Q  V  F  H  L  K  G  A  D  H  S  P  F  F  S  K  P  Q  G  L  H  R  I  L  V  E  I  S  R  I  P  *  T  W  K  L  F  C  *  I  P  Y  Y  *  K  S  H  T  D  T  N  V  A  K  L  L  L  C  K  L  T  M  W  N  A  Y  W  C  T  C  S  V  Y  P  I  T  L  F  H  L  L  Y  L  R  Q  *  E  F  P  L  L  G  K  K  N  A  L  R  F  E  C  </first_frame>
            <second_frame>  W  Y  C  *  P  S  S  S  L  S  T  L  N  C  F  G  K  A  S  N  T  C  T  Y  T  *  F  L  L  Y  I  S  L  *  I  C  C  M  *  I  S  I  N  Q  K  W  A  C  V  Y  H  G  V  P  A  P  *  R  S  G  N  P  N  V  *  R  I  N  R  R  P  P  L  M  A  V  G  A  T  G  G  L  G  I  D  R  L  R  E  T  I  P  S  F  R  S  E  L  S  P  P  R  F  S  Y  S  S  K  C  K  T  A  E  E  V  V  L  L  L  L  I  V  Q  L  R  F  G  I  R  I  R  I  L  R  R  I  N  L  Y  R  V  P  Q  A  L  G  L  A  L  L  L  I  L  F  F  S  L  T  S  L  *  T  R :   K  *  R  L  M  I  *  R  R  T  I  S  S  S  F  M  V  V  D  L  G  P  G  V  G  I  K  P  L  H  F  *  K  K  L  D  L  K  L  L  Q  L  I  *  P  V  Q  A  F  I  L  S  T  Q  I  A  S  Q  A  Y  R  N  M  Y  S  R  S  L  I  F  L  R  S  L  L  M  E  K  R :   *  F  W  W  D  M  I  L  A  V  P  V  Y  P  L  R  W  S  A  I  P  L  R  F  R  K  L  C  L  L  L  L  Q  C  S  L  V  D  K  V  P  L  I  C  S  H  K  R :   Q  I  Q  M  T  L  *  D  S  L  K  Y  L  F  M  P  M  G  T  T  S  L  Q  L  L  L  I  W  T  S  H  S  S  G  T  C  Y  S  T  I  V  L  L  R :   M  L  H  *  H  L  C  Q  *  G  Q  F  P  F  P  Q  F  W  R  S  F  V  Y  P  T  P  S  M  V  V  L  G  G  F  M  *  K  R  Q  K  I  M  R  Y  Q  K  P  Y  S  R  I  *  L  A  I  I  L  Q  N  K  F  F  I  S  R  V  L  I  T  R  L  F  S  P  S  L  K  V  Y  I  G  Y  W  *  R  S  P  G  F  H  K  L  G  S  C  F  A  E  F  L  I  I  R  K  V  T  P  T  Q  M  *  Q  S  Y  C  C  V  N  *  P  C  G  M  P  I  G  V  H  V  R  F  I  Q  L  L  C  S  I  C  Y  T  *  D  S  E  N  S  L  Y  S  G  K  R  M  L  *  D  L  N  V </second_frame>
            <third_frame>   G  I  A  N  H  L  H  L  S  Q  L  S  T  A  L  G  K  H  Q  I  L  V  R  I  R  N  S  Y  C  T  Y  L  C  K  S  V  A  C  E  Y  Q  S  I  R  N  G  H  V  F  I  T  E  F  R  P  R  E  E  A  A  I  Q  T  F  N  E  S  I  G  G  R  R  *  W  R  W  E  Q  Q  V  V  *  E  S  I  V  *  E  R  R  F  H  H  S  G  A  S  S  R  R  R  D  S  P  T  A  A  N  A  K  R  R  R  R  W  C  C  S  F  *  S  F  S  F  A  S  V  S  E  F  E  F  *  E  E  S  T  S  T  A  F  L  K  L  *  G  S  L  S  Y  *  S  S  S  S  A  S  P  A  C  E  P   : G  S  E  G  *  *  F  R  D  E  P  F  R  P  R  S  W  W  W  I  W  G  L  V  L  V  *  N  H  C  T  F  R  R  S  W  I  *  S  Y  C  S  *  F  N  R  F  R  H  S  F  F  R  H  K  *  H  R  K  P  I  A  I  C  T  A  A  H  *  F  S  *  E  A  C  *  W  R  K   : G  D  F  G  G  T  *  F  W  R  C  L  Y  I  L  C  D  G  A  P  S  P  *  G  F  E  S  C  V  C  C  C  C  N  A  H  *  W  T  K  C  P  *  Y  V  L  T  K   : D  R  F  K  *  P  Y  E  T  V  S  N  I  Y  L  C  Q  W  E  R  Q  A  S  N  C  Y  *  F  G  Q  V  T  P  Q  G  L  V  I  Q  P  *  S  C  *   : G  C  C  I  S  I  C  V  N  E  A  N  S  L  F  P  S  F  G  E  A  L  S  I  R  L  Q  V  W  L  C  *  A  V  L  C  R  N  D  R  R  *  C  D  T  K  S  L  T  A  E  S  N  *  Q  *  S  S  R  T  S  F  S  S  Q  G  C  *  S  L  A  F  F  L  Q  A  S  R  S  T  *  D  T  G  R  D  L  Q  D  S  I  N  L  E  V  V  L  L  N  S  L  L  L  E  K  S  H  R  H  K  C  S  K  V  I  V  V  *  I  N  H  V  E  C  L  L  V  Y  M  F  G  L  S  N  Y  F  V  P  F  A  I  L  E  T  V  R  I  P  F  T  R  E  K  E  C  F  K  I  *  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46787" stop="46299"/>
                    <exon start="44843" stop="44607"/>
                    <exon start="43772" stop="43629"/>
                    <exon start="42657" stop="42526"/>
                    <exon start="41924" stop="41652"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1272</number_coding_nucleotides>
                  <number_encoded_amino_acids>424</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVLLTIFISLNSQLLWESIKYLYVYVILIVHISVNLLHVNINQSEMGMCLSRSSGPVKKRQSKRLTNQSAAAVNGGGSNRWSRNRSSKRDDSIIQERALAAAILLQQQMQNGGGGGAAPFDRSASLRYPNSNSKKNQPLPRSSSSRARSLTDPLLQPHQLVNQEVKVDDLETNHFVLVHGGGFGAWCWYKTIALLEEAGFKVTAVDLTGSGIHSFDTNSIASLSQYVQPLTDFLEKLADGEKVILVGHDFGGACISFAMERHPLKVSKAVFVAAAMLTSGQSALDMFSQKTDSNDLMRQSQIFIYANGNDKPPTAIDLDKSLLRDLLFNHSPAKDVALASVSMRPIPFSPVLEKLCLSDSKYGCVRRFYVETTEDNAIPKALQQNLISNNPPEQVFHLKGADHSPFFSKPQGLHRILVEISRIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="69865" PGL_stop="62835"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69865" e_stop="69807"/>
            <exon e_start="68945" e_stop="68902"/>
            <exon e_start="66590" e_stop="66411"/>
            <exon e_start="65256" e_stop="65194"/>
            <exon e_start="65002" e_stop="64963"/>
            <exon e_start="63105" e_stop="62835"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.683" acc_prob="0.796" e_score="0.949"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.876" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.892" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="69865" e_stop="69807" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.683" acc_prob="0.796">
            <gDNA_intron_boundary i_start="69806" i_stop="68946" i_length="861"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68945" e_stop="68902" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="68901" i_stop="66591" i_length="2311"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="66590" e_stop="66411" e_length="180"/>
          </exon>
          <intron i_serial="3" don_prob="0.876" acc_prob="0.997">
            <gDNA_intron_boundary i_start="66410" i_stop="65257" i_length="1154"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65256" e_stop="65194" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.892">
            <gDNA_intron_boundary i_start="65193" i_stop="65003" i_length="191"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="65002" e_stop="64963" e_length="40"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.000">
            <gDNA_intron_boundary i_start="64962" i_stop="63106" i_length="1857"/>
          </intron>
          <exon e_serial="6" e_score="0.993">
            <gDNA_exon_boundary e_start="63105" e_stop="62835" e_length="271"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69865" stop="69807"/>
              <exon start="68945" stop="68902"/>
              <exon start="66590" stop="66411"/>
              <exon start="65256" stop="65194"/>
              <exon start="65002" stop="64963"/>
              <exon start="63105" stop="62835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577804" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT : GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG : GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT : GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT : AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG : CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</gDNA_template>
            <first_frame> *  R  R  I  *  S  G  A  Q  C  I  *  T  D  S  T  N  K  C  M :   H  *  F  N  *  C  G  P  V  R  I  S  S  T   : G  D  Q  L  L  F  L  L  S  T  W  V  L  C  L  S  R  L  L  S  *  V  H  *  V  G  V  P  P  R  H  G  M  N  S  I  V  M  K  S  T  *  S  V  L  Q  N  D  *  D  H  P  Y  P  S  V  *  K  L  S   : C  G  S  V  Y  F  G  S  *  S  N  L  C  G  P  V  R  I  S  S  T   : *  P  E  G  M  K  P  K  A  P  N  E  I  R :   I  L  *  H  P  M  E  G  A  E  T  T  L  D  H  E  S  G  A  G  I  L  S  D  L  L  P  S  V  A  I  L  V  A  *  Y  S  D  S  I  H  W  F  F  L  R  S  L  H  C  N  N  I  S  F  H  K  C  T  T  V  N  C  K  K  M  *  S  H  L  F  L  N  R  D  L  Y  H  V  S  I  I  V  L  T  Y  S  V  P  L </first_frame>
            <second_frame>  E  G  E  S  D  L  E  H  N  A  S  K  Q  I  Q  Q  I  N  A   : C  I  N  S  I  D  V  D  L  *  E  F  L  Q  Q  :  E  T  N  Y  C  F  S  C  Q  L  G  C  S  A  *  A  D  C  *  V  R  F  I  E  *  G  F  L  Q  G  M  A  *  I  A  S  S  *  N  Q  P  K  A  F  C  R  T  T  K  I  I  R  I  L  V  S  K  N  S  R  :  V  V  P  C  I  L  G  V  S  P  T  Y  V  D  L  *  E  F  L  R  H  :  N  R  R  G  *  N  R  R  L  P  M  R  F   : A  F  S  N  I  Q  W  K  E  R  K  P  H  W  I  M  N  Q  V  L  E  Y  F  L  I  Y  C  H  L  *  L  F  *  *  L  S  I  A  I  P  Y  I  G  F  F  Y  G  V  Y  I  A  I  T  F  L  F  I  N  V  L  L  L  I  A  K  R  C  N  L  T  Y  S  *  I  E  I  C  I  M  Y  Q  L  *  Y  S  H  T  L  F  L   </second_frame>
            <third_frame>   K  E  N  L  I  W  S  T  M  H  L  N  R  F  N  K  *  M  H  :  A  L  I  Q  L  M  W  T  C  K  N  F  F  N  R :   R  P  T  T  V  S  L  V  N  L  G  A  L  L  E  Q  I  A  K  L  G  S  L  S  R  G  S  S  K  A  W  H  E  *  H  R  H  E  I  N  L  K  R  F  A  E  R  L  R  S  S  V  S  *  C  L  K  T  L  V :   W  F  R  V  F  W  E  L  V  Q  L  M  W  T  C  K  N  F  F  D  I :   T  G  G  D  E  T  E  G  S  Q  *  D  S  :  H  S  L  T  S  N  G  R  S  G  N  H  T  G  S  *  I  R  C  W  N  T  F  *  F  T  A  I  C  S  Y  F  S  S  L  V  *  R  F  H  T  L  V  F  F  T  E  F  T  L  Q  *  H  F  F  S  *  M  Y  Y  C  *  L  Q  K  D  V  I  S  L  I  P  E  *  R  S  V  S  C  I  N  Y  S  T  H  I  L  C  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="65777" PGL_stop="65926"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65777" e_stop="65926"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="65777" e_stop="65926" e_length="150"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65777" stop="65926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596918" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCCTCTTTTTCCAAGAATTCATCCACTTCCCCTTACTCCATAGGGCCTTCTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCAGCCTCCCCTGGCTCTTCCACCGTCCGAGCTCCCTTTCCTCCCTATGGTATGCTCCCCC</gDNA_template>
            <first_frame> L  P  L  F  P  R  I  H  P  L  P  L  T  P  *  G  L  L  *  *  G  K  A  F  H  F  R  Q  M  T  Q  P  P  L  A  L  P  P  S  E  L  P  F  L  P  M  V  C  S  P </first_frame>
            <second_frame>  S  L  F  F  Q  E  F  I  H  F  P  L  L  H  R  A  F  S  N  R  E  K  P  S  I  S  V  K  *  P  S  L  P  W  L  F  H  R  P  S  S  L  S  S  L  W  Y  A  P   </second_frame>
            <third_frame>   P  S  F  S  K  N  S  S  T  S  P  Y  S  I  G  P  S  L  I  G  K  S  L  P  F  P  S  N  D  P  A  S  P  G  S  S  T  V  R  A  P  F  P  P  Y  G  M  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0124N09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="72053" PGL_stop="71469"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72053" e_stop="71469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="72053" e_stop="71469" e_length="585"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72053" stop="71469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTC</gDNA_template>
            <first_frame> W  I  T  N  S  V  F  Q  L  A  P  V  T  N  Q  T  A  Y  *  F  Y  D  F  L  F  S  *  A  T  F  G  K  P  R  *  E  Y  S  C  *  S  I  L  L  I  C  C  Y  P  I  P  C  S  T  F  Q  I  Y  L  *  I  M  R  S  G  K  R  G  A  G  P  R  V  A  K  *  H  L  N  F  V  P  A  A  K  E  I  D  R  R  V  H  C  Q  E  L  D  S  I  F  T  D  Y  S  V  G  K  Y  F  *  K  A  R  S  *  V  Q  I  P  L  S  D  Q  K  Y  F  T  D  C  F  H  M  L  Q  K  E  I  S  I  L  C  L  F  *  R  G  Y  E  Y  Y  R  G  S  *  C  L  G  C  L  *  F  R  S  F  C  I  L  L  *  W  R  *  F  V  T  Y  T  F  S  W  *  R  K  P  *  K  L  F  D  T  R  A  M  L  F </first_frame>
            <second_frame>  G  *  R  I  Q  C  F  S  *  L  Q  L  Q  I  R  L  P  I  S  S  M  T  S  F  S  L  E  L  L  L  E  S  L  D  K  N  I  V  V  E  V  S  S  S  S  V  A  I  P  F  P  A  P  L  F  R  Y  T  C  E  L  *  D  Q  E  K  E  V  Q  D  P  E  L  Q  S  D  T  *  T  S  F  L  Q  P  K  K  L  T  G  E  C  T  V  R  S  *  I  R  S  S  R  I  I  L  W  G  S  T  S  E  K  Q  D  P  E  S  R  F  L  C  Q  I  K  S  T  S  R  I  V  S  T  C  C  K  K  R  S  R  F  Y  A  C  S  K  E  D  M  S  I  I  G  E  V  D  A  W  D  V  Y  S  S  G  P  S  A  F  Y  Y  D  G  D  D  L  S  H  I  H  S  H  G  E  E  N  L  K  N  Y  L  T  L  E  L  C  S   </second_frame>
            <third_frame>   D  N  E  F  S  V  S  A  S  S  S  Y  K  S  D  C  L  L  V  L  *  L  P  F  L  L  S  Y  F  W  K  A  *  I  R  I  *  L  L  K  Y  P  P  H  L  L  L  S  H  S  L  L  H  F  S  D  I  P  V  N  Y  E  I  R  K  K  R  C  R  T  Q  S  C  K  V  T  L  E  L  R  S  C  S  Q  R  N  *  P  E  S  A  L  S  G  V  R  F  D  L  H  G  L  F  C  G  E  V  L  L  K  S  K  I  L  S  P  D  S  S  V  R  S  K  V  L  H  G  L  F  P  H  A  A  K  R  D  L  D  F  M  L  V  L  K  R  I  *  V  L  *  G  K  L  M  L  G  M  F  I  V  Q  V  L  L  H  S  I  M  M  E  M  I  C  H  I  Y  I  L  M  V  K  K  T  L  K  I  I  *  H  S  S  Y  A  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71764" stop="71471"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRSSRIILWGSTSEKQDPESRFLCQIKSTSRIVSTCCKKRSRFYACSKEDMSIIGEVDAWDVYSSGPSAFYYDGDDLSHIHSHGEENLKNYLTLELCS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="75047" PGL_stop="74731"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75047" e_stop="74731"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="75047" e_stop="74731" e_length="317"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75047" stop="74731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCGGAAGCTAGCGGAGTATAGAACTCACCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTCGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATGTTTAAAATAATCAAAGAAATCATTCTTTATTTTAAGAAATTCAATAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTG</gDNA_template>
            <first_frame> K  R  K  L  A  E  Y  R  T  H  H  R  R  R  T  G  T  S  Y  A  T  G  *  N  P  *  N  R  I  N  F  P  A  V  S  F  P  S  C  S  N  S  *  K  I  W  *  L  D  G  T  V  R  F  S  Y  P  C  L  K  *  S  K  K  S  F  F  I  L  R  N  S  I  N  L  F  F  L  K  K  S  R  I  C  F  H  F  F  K  E  R  G  D  E  C  P  R  L  F  L  S  M  G  F  S   </first_frame>
            <second_frame>  S  G  S  *  R  S  I  E  L  T  T  V  A  G  P  E  L  H  T  Q  P  D  E  T  P  K  T  E  S  I  F  P  P  S  A  S  H  H  V  R  I  L  E  K  S  G  N  S  M  V  L  *  D  F  L  I  H  V  *  N  N  Q  R  N  H  S  L  F  *  E  I  Q  *  I  F  S  F  L  K  N  Q  E  F  V  F  T  S  L  R  R  E  G  M  N  A  R  D  Y  F  C  Q  W  G  F  L  </second_frame>
            <third_frame>   A  E  A  S  G  V  *  N  S  P  P  S  Q  D  R  N  F  I  R  N  R  M  K  P  L  K  P  N  Q  F  S  R  R  Q  L  P  I  M  F  E  F  L  K  N  L  V  T  R  W  Y  C  K  I  F  L  S  M  F  K  I  I  K  E  I  I  L  Y  F  K  K  F  N  K  S  F  L  S  *  K  I  K  N  L  F  S  L  L  *  G  E  R  G  *  M  P  E  T  I  S  V  N  G  V  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75024" stop="74812"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSPPSQDRNFIRNRMKPLKPNQFSRRQLPIMFEFLKNLVTRWYCKIFLSMFKIIKEIILYFKKFNKSFLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="80584" PGL_stop="78464"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="80584" e_stop="80197"/>
            <exon e_start="80107" e_stop="79991"/>
            <exon e_start="79887" e_stop="79792"/>
            <exon e_start="78624" e_stop="78464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="0.992"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.712" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="80584" e_stop="80197" e_length="388"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="80196" i_stop="80108" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80107" e_stop="79991" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="79990" i_stop="79888" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="79887" e_stop="79792" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79791" i_stop="78625" i_length="1167"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="78624" e_stop="78464" e_length="161"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80584" stop="80197"/>
              <exon start="80107" stop="79991"/>
              <exon start="79887" stop="79792"/>
              <exon start="78624" stop="78464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580676" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</gDNA_template>
            <first_frame> S  *  F  V  C  L  F  *  R  G  Y  G  A  V  *  G  L  L  M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  *  G  I  S  N  P  N  T  *  F  Y  I  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  S  T  A  S  K  N  N  L  F  S  L  F  I  I  I  L  L  F  F  I  S  F </first_frame>
            <second_frame>  L  D  L  Y  A  C  S  K  E  D  M  G  Q  Y  R  G  S  *  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  R  A  S  P  I  Q  T  P  N  F  T  S  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  Y  Y  Y  F  L  F  H   </second_frame>
            <third_frame>   L  I  C  M  L  V  L  K  R  I  W  G  S  I  G  A  L  D  A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  I  Y  C  I  E  K  *  F  I  F  S  L  Y  Y  Y  I  I  I  F  Y  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80582" stop="80337"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LICMLVLKRIWGSIGALDAWVVYSSGPSEFYYEGDDLSLLHSHGVDNLNNYLTPRAMLSSRVDGTRVNGLIREIKVKQMSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79848" stop="79792"/>
                    <exon start="78624" stop="78466"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKESVQVHSMGIQKKVLCSWGVRASPIQTPNFTSNLVLTKFTVINSNLLHRKIIYFLSLLLYYYFLFH</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="80037" stop="79991"/>
                    <exon start="79887" stop="79792"/>
                    <exon start="78624" stop="78555"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="84849" PGL_stop="84185"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84849" e_stop="84185"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84849" e_stop="84185" e_length="665"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84849" stop="84185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593829" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGCCCACTGCAGAACTTCTTCCTACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAA</gDNA_template>
            <first_frame> T  A  H  C  R  T  S  S  Y  A  I  L  T  T  V  A  E  P  E  A  T  G  V  *  N  S  P  P  S  Q  K  R  N  L  P  E  Y  K  T  R  H  R  R  R  T  G  T  S  Y  A  T  G  *  K  P  L  K  P  N  R  F  S  R  R  Q  L  P  I  M  L  E  F  L  K  N  L  V  T  R  W  Y  R  V  R  F  S  Y  P  C  L  K  K  S  F  F  F  L  R  N  S  R  N  L  F  F  L  K  K  S  R  I  C  V  Y  F  F  K  E  R  G  D  E  C  P  R  L  F  L  S  M  G  F  S  W  I  I  A  Q  V  L  L  T  S  S  Y  K  T  E  L  N  F  C  Q  G  F  S  E  *  F  H  Q  G  Y  *  *  V  A  L  K  Q  T  Q  I  S  V  R  V  F  L  N  D  F  K  K  A  S  M  L  V  P  P  R  C  T  N  L  P  L  Q  R  Y  Y  M  E  S  C  G  V  V  L  E  A  P  F  A  Q  F  *  F  N  Y   </first_frame>
            <second_frame>  L  P  T  A  E  L  L  P  T  L  Y  S  P  P  S  Q  N  R  K  L  P  E  Y  R  T  R  H  R  R  R  S  G  T  Y  R  S  I  K  L  A  T  V  A  G  P  E  H  H  T  Q  P  D  E  N  P  *  N  R  I  D  F  P  A  V  S  F  P  S  C  *  N  S  *  K  I  W  *  L  D  G  T  E  *  D  F  L  I  H  V  *  R  N  H  S  F  F  *  E  I  Q  E  I  F  S  F  L  K  N  Q  E  F  V  F  T  S  L  R  R  E  G  M  N  A  R  D  Y  F  C  Q  W  G  F  L  G  L  L  H  K  C  C  *  L  V  L  I  K  Q  S  *  I  S  V  R  G  F  L  N  D  F  T  R  V  I  D  E  L  L  *  N  R  L  K  F  L  S  E  F  S  *  M  I  L  K  K  H  R  C  W  C  H  Q  D  V  L  I  Y  P  F  K  G  I  I  W  K  V  V  E  L  F  L  K  P  H  S  H  N  S  S  L  I  I  </second_frame>
            <third_frame>   C  P  L  Q  N  F  F  L  R  Y  T  H  H  R  R  R  T  G  S  Y  R  S  I  E  L  A  T  V  A  E  A  E  P  T  G  V  *  N  S  P  P  S  Q  D  R  N  I  I  R  N  R  M  K  T  P  K  T  E  S  I  F  P  P  S  A  S  H  H  V  R  I  L  E  K  S  G  N  S  M  V  Q  S  K  I  F  L  S  M  F  K  E  I  I  L  F  F  K  K  F  K  K  S  F  L  S  *  K  I  K  N  L  C  L  L  L  *  G  E  R  G  *  M  P  E  T  I  S  V  N  G  V  F  L  D  Y  C  T  S  V  V  D  *  F  L  *  N  R  V  E  F  L  S  G  V  F  *  M  I  S  P  G  L  L  M  S  C  F  K  T  D  S  N  F  C  P  S  F  L  E  *  F  *  K  S  I  D  A  G  A  T  K  M  Y  *  F  T  P  S  K  V  L  Y  G  K  L  W  S  C  S  *  S  P  I  R  T  I  L  V  *  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0124N09.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84690" stop="84376"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPLKPNRFSRRQLPIMLEFLKNLVTRWYRVRFSYPCLKKSFFFLRNSRNLFFLKKSRICVYFFKERGDECPRLFLSMGFSWIIAQVLLTSSYKTELNFCQGFSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 51 chains have been computed
$ 
$ memory statistics:
$ 34688 bytes spliced alignments in total
$ 16 spliced alignments have been stored
$ 2168 bytes was the average size of a spliced alignment
$ 23392 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1559 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 58 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:10:33
-->
