<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:22:27"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0144P17-dWneh/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="C2_At1g65900" ref_strand="+" ref_description="C2_At1g65900">
      <seq>ttttagaaagtattataagtgttcgcatttctttcaccccttcactaaatcccctagcctaattttgtcagtgtatgtgcacataaatatgtatttactcacacatttttctactaatttgtatgtggtgcaaattttgtttgttttgttgtggtgcattcagagtttagactatgcaaatgcagcaattccaacagtgaaagttgggaatatatcaaaagtgggagattctgcatattttaggatatactatggacaaaccttcaaagttattaagaacacccttgatggaaagagttatcttcttatccagaacaacacaagaatggccagtagaacaaaatattgcacctcaagaataaagtcttttgttatcccactagcaaactactcgatcgagactgactacttttttccaggtacaccatttttaaccatcctccttgttttttttcccactttataacatcatattataagctttatatgtctttttggtacgcgttgataactcatgcactgactgtttctctctttttcttctctttctttccttcaattcacagtttcctttttcgaggtaagaatgcacagttttagtattattctgatagctgtattactagattgaaaatttttgcgtggaatattgcagcttctangcctattgggaaacttgaaangcataacatcaacatacgtggcctcccaatgtgtactgaaactatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0144P17.1" temp_strand="+" temp_description="C02HBa0144P17.1  AC226509.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0144P17 sequenced_by:kribb upload_account_name:korea">
        <position start="26552" stop="29172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26852" g_stop="27164" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27165" i_stop="28455" i_length="1291">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28456" g_stop="28872" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="730" r_length="417" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0144P17.1" gen_strand="+" ref_id="C2_At1g65900" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0144P17.1" gen_strand="+"/>
        <rDNA rDNA_id="C2_At1g65900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26852" e_stop="27164"/>
          <exon e_start="28456" e_stop="28872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAGAAAGTATTATAAGTGTTCGCATTTCTTTCACCCCTTCACTAAATCCCCTAGCCTAATTTTGTCAGTGTATGTGCACATAAATATGTATTTACTCACACATTTTTCTACTAATTTGTATGTGGTGCAAATTTTGTTTGTTTTGTTGTGGTGCATTCAGAGTTTAGACTATGCAAATGCAGCAATTCCAACAGTGAAAGTTGGGAATATATCAAAAGTGGGAGATTCTGCATATTTTAGGATATACTATGGACAAACCTTCAAAGTTATTAAGAACACCCTTGATGGAAAGAGTTATCTTCTTATCCAGGTAACTACATTTATTTCGAACAGATTATGTAATTGTTATTGTATAGTTCATTGCTAGAACAGACTCTGGCAAGAAGTAGGATTTAAGTGATATACACCGACAATGTCCGCGTATATTTAAGTTATAATAGTAGGTTATTGTTACCAATTCTAATTGGGTGAATACTTTTCACACCTTTAGTCTTGTTTGAATTTAGTTAGAACTGTAAAAAAAAAAGATGAAGATATTTCCAGGCTAGAATTTACTTGAAAAGAAGATGATAAGGGTTACTGGACCACAAAAGTTGGACATTGGAAGTAGTAGGGTCAAGAATATTTTTTTAAAATGAAAAAGAGTTATACTTCTTTTCATTTGGTCCTCTGTAGTTGGCAATCCAACAACTCACAAAGTACTTCTTGGTTGCTGAATTCCATGGCACAAGTTGCTTTGTTTTGAACTTTCTGTTGGTGTTGTTTTCTTGGCTAAATGATCAATCTGCAGAAAAAAAAGTAAAAGTGTCACTACCTACAGCTACATTATTCTTATTGATCAATACAGTCATGAATTAGCTCGTTTTCGTCTTCTATTGTTCCCTTTTTAGGAGAAGCCAGGGGATTTTACAGCCATGTATAAGAGCATACCTTTGACAGAACCAGAACTTATAGAGATTGAAGATTCTTTGTTTTAAAATTCTTTCAACTAGATCTATATATTTATCCGCAATCAGGGAGAGAGGGGGTTCATTGCTGGAATATGCATATATAGTAATTTTGAACACCCTTGGTGTCCGCGTTGATATTGGAATTCAGAACTGGTCATATACTCTAACAAAATGCTTTTGTGTGAATTCCAGCTAGTTGCAAGTTCTTAGTTCTTTTGTAATCTAAGAATACGTGATACAACCTTGGGAGAACAACATCTTTAAAGCTAGCTATTAAGGTGGGAGAGCCCAAGGCTATATAGCCACACGCCCACACCTTTAAAGCTAGCTATTAAGGTGGGAGAGTCCAGGGCTATACAGCCACACGCTGCACACTTTTAAAGCTAGTTATTAAGGTGGGAGAGTCCAAGGCTATACAGCCACACGCTGCACACCTTTAAAGCTAGCTATTAAGGTGGGGGATCCCAAGGCTACATAGCCACATGCCCACACCTTTAAAGCTAGCTATTATGGTGGGGGAGCCCAAGGCTATATGAGCCCCGCATCAGCTCTTCATTTAACCAAAGTCCCATACCTAGCAATAGGATCATAACAATATGATTCTAGGAAACCAATTCTCTCCTGATTTACTAGAATGTAAATTTTATGCAGAACAACACAAGAATGGCCAGTAGAACAAAATATTGCACCTCAAGAATAAAGTCTTTTGTTATCCCACTAGCAAACTACTCGATCGAGACTGACTACTTTTTTCCAGGTACACCATTTTTAACCATCCTCCTTGTTTTTTTTCCCACTTTATAACATCATATTATAAGCTTTATATGTCTTTTTGGTACGCGTTGATAACTCATGCACTGACTGTTTCTCTCTTTTTCTTCTCTTTCTTTCCTTCAATTCACAGTTTCCTTTTTCGAGGTAAGAATGCACAGTTTTAGTATTATTCTGATAGCTGTATTACTAGATTGAAAATTTTTGCGTGGAATATTGCAGCTTCTAGGCCTATTGGGAAACTTGAAAGGCATAACATCAACATACGTGGCCTCCCAATGTGTACTGAAACTATAC</genome_strand>
        <mrna_strand>TTTTAGAAAGTATTATAAGTGTTCGCATTTCTTTCACCCCTTCACTAAATCCCCTAGCCTAATTTTGTCAGTGTATGTGCACATAAATATGTATTTACTCACACATTTTTCTACTAATTTGTATGTGGTGCAAATTTTGTTTGTTTTGTTGTGGTGCATTCAGAGTTTAGACTATGCAAATGCAGCAATTCCAACAGTGAAAGTTGGGAATATATCAAAAGTGGGAGATTCTGCATATTTTAGGATATACTATGGACAAACCTTCAAAGTTATTAAGAACACCCTTGATGGAAAGAGTTATCTTCTTATCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACACAAGAATGGCCAGTAGAACAAAATATTGCACCTCAAGAATAAAGTCTTTTGTTATCCCACTAGCAAACTACTCGATCGAGACTGACTACTTTTTTCCAGGTACACCATTTTTAACCATCCTCCTTGTTTTTTTTCCCACTTTATAACATCATATTATAAGCTTTATATGTCTTTTTGGTACGCGTTGATAACTCATGCACTGACTGTTTCTCTCTTTTTCTTCTCTTTCTTTCCTTCAATTCACAGTTTCCTTTTTCGAGGTAAGAATGCACAGTTTTAGTATTATTCTGATAGCTGTATTACTAGATTGAAAATTTTTGCGTGGAATATTGCAGCTTCTANGCCTATTGGGAAACTTGAAANGCATAACATCAACATACGTGGCCTCCCAATGTGTACTGAAACTATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG454-R" ref_strand="+" ref_description="TG454-R">
      <seq>caagtgtaatttaggaagcaaaataagaaaagtatatctcataaggatgtttggagtagaatgtaatgcaggcatgcagaaatataccaagtttctgaactcgagattgtagaaagtatcgatgtatctttgctttgcttgtttctgatctttgtacaatgtcctccaaaaagtgtagattgaccccatattcaataccttgtttgcatagatcttccatgtgtaactgcaaaatataaggattaagaaaatttcaaccagatatatgcctctctgcaatttgaacaattgtttatttgtgagttaccattcatatatacgctttagaccctgggctgaaatcctgttccaatgctcaggatcctccttgcacttctggaaaaaattggcaattttgttgcttgattcatctccattatttggatcaatatggaagcctgaaatcccgtcaacaataatctcagcagggccgccttggctggtagcgaaggttggtaatccacagttcattgcttcaatgactgtaaggccaaatgcttcatataaagcaggctgcacaaaagctccttttgaatctgctattgtgcggtagagttcgctattcctgtatctgtcagtctgagctgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0144P17.1" temp_strand="+" temp_description="C02HBa0144P17.1  AC226509.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0144P17 sequenced_by:kribb upload_account_name:korea">
        <position start="37137" stop="38365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37437" g_stop="38065" g_length="629"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="629" r_length="629" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0144P17.1" gen_strand="+" ref_id="TG454-R" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0144P17.1" gen_strand="+"/>
        <rDNA rDNA_id="TG454-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37437" e_stop="38065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGTGTAATTTAGGAAGCAAAATAAGAAAAGTATATCTCACAAGGATGTTTGGAGTAGAATGTAATGCAGGCATGCAGAAATATACCAAGTTTCTGAACTCGAGATTGTAGAAAGTATCGATGTATCTTTGCTTTGCTTGTTTCTGATCTTTGTACAATGTCCTCCAAAAAGTGTAGATTGACCCCATATTCAATACCTTGTTTGCATAGATCTTCCATGTGTAACTGCAAAATATAAGGATTAAGAAAATTTCAACCAGATATATGCCTCTCTGCAATTTGAACAATTGTTTATTTGTGAGTTACCATTCATATATACGCTTTAGACCCTGGGCTGAAATCCTGTTCCAATGCTCAGGATCCTCCTTGCACTTCTGGAAAAAATTGGCAATTTTGTTGCTTGATTCATCTCCATTATTTGGATCAATATGGAAGCCTGAAATCCCGTCAACAATAATCTCAGCAGGGCCGCCTTGGCTGGTAGCGAAGGTTGGTAATCCACAGTTCATTGCTTCAATGACTGTAAGGCCAAATGCTTCATATAAAGCAGGCTGCACAAAAGCTCCTTTTGAATCTGCTATTGTGCGGTAGAGTTCGCTATTCCTGTATCTGTCAGTCTGAGCTGCTA</genome_strand>
        <mrna_strand>CAAGTGTAATTTAGGAAGCAAAATAAGAAAAGTATATCTCATAAGGATGTTTGGAGTAGAATGTAATGCAGGCATGCAGAAATATACCAAGTTTCTGAACTCGAGATTGTAGAAAGTATCGATGTATCTTTGCTTTGCTTGTTTCTGATCTTTGTACAATGTCCTCCAAAAAGTGTAGATTGACCCCATATTCAATACCTTGTTTGCATAGATCTTCCATGTGTAACTGCAAAATATAAGGATTAAGAAAATTTCAACCAGATATATGCCTCTCTGCAATTTGAACAATTGTTTATTTGTGAGTTACCATTCATATATACGCTTTAGACCCTGGGCTGAAATCCTGTTCCAATGCTCAGGATCCTCCTTGCACTTCTGGAAAAAATTGGCAATTTTGTTGCTTGATTCATCTCCATTATTTGGATCAATATGGAAGCCTGAAATCCCGTCAACAATAATCTCAGCAGGGCCGCCTTGGCTGGTAGCGAAGGTTGGTAATCCACAGTTCATTGCTTCAATGACTGTAAGGCCAAATGCTTCATATAAAGCAGGCTGCACAAAAGCTCCTTTTGAATCTGCTATTGTGCGGTAGAGTTCGCTATTCCTGTATCTGTCAGTCTGAGCTGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG454-F" ref_strand="+" ref_description="TG454-F">
      <seq>tataattttgttatcacaagcacatatcaagaaatagctggaaggtaagaattagagagaataagtaatgcattaatatgatagaattgaatacacatcagaaatccagttatgtatttgctcaaattattgaaatttcatggatctcattcttatgtgctaacatttgcagcaaagacaggccagggcaatatgaaagtcacagtgcatttacccttccagggctttatagagttgcttcaggcatcaatgtctttgatcctaaatttaacattgctgctcctggggcagaccagtcagtatatttcccttacacagaaaagcagaagcgtttgactgatttccgacctgccattgagaagcttctttttagtaaagtggataatgacgagcacatgtaagtcttagtgctcaaacttcagtttagtgccaataggaatatcccacagttctacgtattaatgttttacttctttcaaccacagtggatatttagaagacagaacgaagcctatcctcttcaccatggcaaggctggacacagtgaagaacacaactggactaactgaatggtttggcaagaacaagaagctcaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0144P17.1" temp_strand="-" temp_description="C02HBa0144P17.1  AC226509.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0144P17 sequenced_by:kribb upload_account_name:korea">
        <position start="39091" stop="37899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38796" g_stop="38199" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0144P17.1" gen_strand="-" ref_id="TG454-F" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0144P17.1" gen_strand="-"/>
        <rDNA rDNA_id="TG454-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38796" e_stop="38199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGATTTTGTTATCACAAGCACATATCAAGAAATAGCTGGAAGGTAAGAATTAGAGAGAATAAGTAATGCATTAATATGATAGAATTGAATACACATCAGAAATCCAGTTATGTATTTGCTCAAATTATTGAAATTTCATGGATCTCATTCTTATGTGCTAACATTTGCAGCAAAGACAGGCCAGGGCAATATGAAAGTCACAGTGCATTTACCCTTCCAGGGCTTTATAGAGTTGCTTCAGGCATCAATGTCTTTGATCCTAAATTTAACATTGCTGCTCCTGGGGCAGACCAGTCAGTATATTTCCCTTACACAGAAAAGCAGAAGCGTTTGACTGATTTCAGACCTGCCATTGAGAAGCTTCTTTTTAGTAAAGTGGATAATGACGAGCACATGTAAGTCTTAGTGCTCAAACTTCAGTTTAGTGCCAATAGGAATATCCCACAGTTCTACGTATTAATGTTTTACTTCTTTCAACCACAGTGGATATTTAGAAGACAGAACGAAGCCTATCCTCTTCACCATGGCAAGGCTGGACACAGTGAAGAACACAACTGGACTAACTGAATGGTTTGGCAAGAACAAGAAGCTCAGA</genome_strand>
        <mrna_strand>TATA-ATTTTGTTATCACAAGCACATATCAAGAAATAGCTGGAAGGTAAGAATTAGAGAGAATAAGTAATGCATTAATATGATAGAATTGAATACACATCAGAAATCCAGTTATGTATTTGCTCAAATTATTGAAATTTCATGGATCTCATTCTTATGTGCTAACATTTGCAGCAAAGACAGGCCAGGGCAATATGAAAGTCACAGTGCATTTACCCTTCCAGGGCTTTATAGAGTTGCTTCAGGCATCAATGTCTTTGATCCTAAATTTAACATTGCTGCTCCTGGGGCAGACCAGTCAGTATATTTCCCTTACACAGAAAAGCAGAAGCGTTTGACTGATTTCCGACCTGCCATTGAGAAGCTTCTTTTTAGTAAAGTGGATAATGACGAGCACATGTAAGTCTTAGTGCTCAAACTTCAGTTTAGTGCCAATAGGAATATCCCACAGTTCTACGTATTAATGTTTTACTTCTTTCAACCACAGTGGATATTTAGAAGACAGAACGAAGCCTATCCTCTTCACCATGGCAAGGCTGGACACAGTGAAGAACACAACTGGACTAACTGAATGGTTTGGCAAGAACAAGAAGCTCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="C2_At5g64670" ref_strand="+" ref_description="C2_At5g64670">
      <seq>gtcacattgctcaactataaaccctaaagaaatgttgagaagaagaatcacttcactactatcatcgtctaccctccaaaatgttccaatctacagcgaacccatcaagatttctcaacacatattcacatcttcacaaaagtttccatttttgcaattttctcaacgccccatctccagcattggatcattggggtgtcagtttcgcagagcttacagtcttctgagcctaaatgatttgcaagataacaaaggtgctaggaagcagaagactcgtaagggaagaggtattgggtcgggtaaaggaaagacggcgggtcgaggacataagggtcagaaagctagagggacatataagttcgggtttgaaggtggacaaaccccacttcgtcgccgtgtgcctaaacgtgggtttaagaacccattcagtctcacatttcagccagttgggttgggaaagattgcaaagctgataaatgctggaaagattgactcgtcagagttgatcacaatgaaaactctaaaggattccggtgcaatagggaagcaaatagaagatggagccaggttgatggggcgtggagctgaacatattcagtggcccatccatttagaggtctcaagggtgaccgttagagctaaagcagccgtggaagcagcgggtgggtctgtaaggagagtgcattacaacaaacttgggttacgggcactactgatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0144P17.1" temp_strand="-" temp_description="C02HBa0144P17.1  AC226509.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0144P17 sequenced_by:kribb upload_account_name:korea">
        <position start="48209" stop="44493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47910" g_stop="47468" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47467" i_stop="45917" i_length="1551">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45916" g_stop="45833" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="526" r_length="84" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45832" i_stop="45704" i_length="129">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45703" g_stop="45614" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="616" r_length="90" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45613" i_stop="44897" i_length="717">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44896" g_stop="44793" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="720" r_length="104" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0144P17.1" gen_strand="-" ref_id="C2_At5g64670" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0144P17.1" gen_strand="-"/>
        <rDNA rDNA_id="C2_At5g64670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47910" e_stop="47468"/>
          <exon e_start="45916" e_stop="45833"/>
          <exon e_start="45703" e_stop="45614"/>
          <exon e_start="44896" e_stop="44793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACATTGCTCAACTATAAACCCTAGAAGAAATGTTGAGAAGAAGAATCACTTCACTACTATCATCGTCTTCACTCCAAAATGTTCCAATCTACGGCGAACCCATCAAGATTTCTCAACCCATATTCACATCTTCACAAAAGTTACCACTTTTGCAATTCTCTCAACGCCCCATCTCCAGCATTGGATCATTGGGGTGTCAGTTTCGCAGAGCTTACAGTCTTCTGAGCCTAAATGATTTGCAAGATAACAAAGGTGCTAGGAAGCAGAAGACTCGGAAGGGAAGAGGTATTGGGTCTGGTAAAGGGAAGACGGCGGGTCGTGGACATAAGGGTCAGAAAGCTAGAGGGACGTATAAGTTCGGGTTTGAAGGTGGACAGACCCCACTTCGTCGCCGTGTGCCTAAACGTGGATTTAAGAACCCGTTCAGTCTCACATTTCAGGTATTTTTACTCTTGGGTATTGGATTTTGGTTTTATTTTTCAGCAGTTGATTGATTTCGTGCTTATAGCTGGGATCACGTCAAAGTTCAAATTTTGAATGGTTTGAACGTTCTCTTGAAAGTTACATAAAATAACTTTTTAAAAATGATTATGATAGAAGGTAGAGCATTCATTGAGTAAATATTTCATTTTATAAATTAGTTTCTAGTTTGGTTGCTGATAGACTAAAGGAATAATTGTTCCATAACCAGGGTTGTACTTTTTGTTAACGCATAGAATCAAAAGAAAGTAGGACATGTAAAATGGGAGTGGCAGTTTAGAAAATTTGGTAGTTTGTTTGTGTTTTATGCGAAGATTGTATAGAATTAGCCATTTGGTGTTATGTTATTGTGTCTGTTTGTACTTTTTAGCTATGTAGTACTTTCTGTTAGCGCGAATTTCAACTTTCTTGATTTCAGACTCTGTAGCTTCTTCTTTCCTAGAAATGTTATTGTTGTGTAGTGATCCAGTAATAAGGGTAGGTCTTGACTCACTCATAGGAGTGGGGTTTTTACCTCGTGCGCACTCAAAGGGTAGCAGCTGTGGATTTCCCTTGATGTATAAAAAAAAGCCATCTGTGATCTTAAGCTCTTCAAGTTGTAGCTTTTGATGTGTGTGTCATCAATCAGAACTTGTTCCTTTATTGGATCATAGAATCTGTCTATCAAGCCAATAATGGTGGATTTTCCAGAACCACTTTGCCCAACAAGTAGTACTGTTTTCCAGATTCGTCCCTGGGAAGATTGATTGATCAAGCTTAGAAGGATGATAAAAGAAGACATTCTTCTGCTCTATCTTTCCTCTTTATACCTTTGTGACATAAAGCCCTTCAGGATTCTCAAGTTCAATCTCAGTCTTCGATCGAAGACAGCATATACAGATGCAATGGCACTGCTACCTGTTGCCAATTCAGAAGTCATACTTTCAGAATCTGCTATATTTTTCCCCGTACTCATCAAAAGGAACAAAACTTGAAATAGTTGCTATGAACCGAGTAAGTTTTGTCCATTAGTCTTCCCCATACCAATATGTTAGGGCAATGGCAACTGCAGTTAGAAATTGAGAGCAAAAGAAGCCAGCACCAGAAAGTAGCGACTGTCTAATATTTTCTTTTCTGGGGCTTCCTGAGATCCTTTAAAGCGGTCTAACATTCTATATTGAGAAGAGAAGGGTGTGATAGTCCTTTGATTGATCACTGCTTCACTTGCTAGCTTGAAGAAGTTATCTAAGAGTAAAGGTTGTATAGATATTAGTACAACTTCTACTTAAATATGTTGTTTGCACCATACAGGTGCCATCAATTATCATGACAGGAGGCGGCACATCTTTTTCTTACTAAAATTCCCCCTTTTTTGGATGATATGTGGTTAAATACGTCACTAATTATTTTATCATTGAGTCAACATATGTGAATATTTGTTTAGTTATTAAAACCAAGATGGCTTAACACCTTGGAGTAATGTTAGTGGTTCTCTTCTGATTAGTTGTTCTTTGTTTATGTGCTCCATGCAGCCAGTTGGGTTGGGAAAGATTGCAAATCTGATAAATGCTGGGAAGATTGACTCGTCAGAGTTGATCACAATGAAAACTCTAAAGGTAATTGTAGATTATGGTATAACTATAGCATTATATGGTATAACTATAGCATTATATGGTATAACTATAGCATTATATTGCTTAATCATTTAGCACCTTCCTTTACAAAACAACTTCTTGGGCCAATAGGATTCCGGTGCAATAGGGAAGCAAATAGAAGATGGAGCCAGGTTGATGGGGCGTGGGGCTGAACTTATTCAATGGCCCATCCATCTAGAGGTAATATTCAGTCAAGACTAATTAATATAGCTTTTTTATTCAATTTTGTATTCATTGTTAAAAAACAATACTCCCTCTATTCCATATTGACTGAATTTCTGACGCAATGATCACTTATTAAGAAAAATATTCATGGAAATATTTTAAACTATACTTTCCACTATTGTCCTTTGTGAAATTATAAAGATAACTTTGCTGGTAGTGAAAGTTATCTCCTAGAAATATCAAACATCATTAAAGGAATGAGCAAAAAATTTCAAACATCCATCCATCTTGAACTTTGAACAATTCAATTATTTTGAACAATGATAAAAGACCCAAAAATTCAACTAATGTGGAATAGGACGAGTAATATTAAATTTGGTATTGCACTTCATATAAAGGTCATTTGGTAGAAATAACATAAGTTGCATTTTGCATTTGAGTTGCTAAGTGGTTCTTGACATGTACTGCTATTTATATTAAATGTGTTGCAATGTATAAGTATTTGTAAAAGCTCACGTCAGTTCAGCACTATTAGAAATGTGCTTTGCACAAATATTGATGGTGGAGAGGGGATATTTTCATGTTCCTTAAACATAGATGTTTGGCATGATCCTTTTTTCTCTTTGTTTATGGTGTCGATTTATTGAGAATATGCATTACATTTACTTGTTAAAATGGCAAATGATGTCTGTCCTCTCAGCGTACTCATCCAACATCAACTGTTGATGACAGGTTTCAAGGGTGACCGCTAGAGCTAAAGCAGCTGTGGAAGCAGCGGGTGGGTCTGTAAGGAGAGTGCATTACAACAAACTTGGGTTGCGGGCACTACTGAAGCC</genome_strand>
        <mrna_strand>GTCACATTGCTCAACTATAAACCCTA-AAGAAATGTTGAGAAGAAGAATCACTTCACTACTATCATCGTCTACCCTCCAAAATGTTCCAATCTACAGCGAACCCATCAAGATTTCTCAACACATATTCACATCTTCACAAAAGTTTCCATTTTTGCAATTTTCTCAACGCCCCATCTCCAGCATTGGATCATTGGGGTGTCAGTTTCGCAGAGCTTACAGTCTTCTGAGCCTAAATGATTTGCAAGATAACAAAGGTGCTAGGAAGCAGAAGACTCGTAAGGGAAGAGGTATTGGGTCGGGTAAAGGAAAGACGGCGGGTCGAGGACATAAGGGTCAGAAAGCTAGAGGGACATATAAGTTCGGGTTTGAAGGTGGACAAACCCCACTTCGTCGCCGTGTGCCTAAACGTGGGTTTAAGAACCCATTCAGTCTCACATTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTGGGTTGGGAAAGATTGCAAAGCTGATAAATGCTGGAAAGATTGACTCGTCAGAGTTGATCACAATGAAAACTCTAAAG.................................................................................................................................GATTCCGGTGCAATAGGGAAGCAAATAGAAGATGGAGCCAGGTTGATGGGGCGTGGAGCTGAACATATTCAGTGGCCCATCCATTTAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCAAGGGTGACCGTTAGAGCTAAAGCAGCCGTGGAAGCAGCGGGTGGGTCTGTAAGGAGAGTGCATTACAACAAACTTGGGTTACGGGCACTACTGATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="T1051" ref_strand="+" ref_description="T1051">
      <seq>gattacattgctcaactataaaccctagaagaaatgttgagaagaagaatcacttcactactatcatcgtcttcactccaaaatgttccaatctacggcgaacccatcaagatttctcaacccatattcacatcttcacaaaagttaccacttttgcaattctctcaacgccccatctccagcattggatcattggggtgtcagtttcgcagagcttacagtcttctgagcctaaatgatttgcaagataacaaaggtgctaggaagcagaagactcggaagggaagaggtattgggtctggtaaagggaagacggcgggtcgtggacataagggtcagaaagctagagggacgtataagttcgggtttgaaggtggacagaccccacttcgtcgccgtgtgcctaaacgtggatttaagaacccgttcagtctcacatttcagccagttgggttgggaaagattgcaaatctgataaatgctgggaagattgactcgtcagagttgatcacaatgaaaactctaaaggattccggtgcaatagggaagcaaatagaagatggagccaggttgatggggcgtggggctgaacttattcaatggcccatccatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0144P17.1" temp_strand="-" temp_description="C02HBa0144P17.1  AC226509.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0144P17 sequenced_by:kribb upload_account_name:korea">
        <position start="48211" stop="45318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47911" g_stop="47468" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47467" i_stop="45917" i_length="1551">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45916" g_stop="45833" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="528" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45832" i_stop="45704" i_length="129">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45703" g_stop="45618" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="614" r_length="86" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0144P17.1" gen_strand="-" ref_id="T1051" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0144P17.1" gen_strand="-"/>
        <rDNA rDNA_id="T1051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47911" e_stop="47468"/>
          <exon e_start="45916" e_stop="45833"/>
          <exon e_start="45703" e_stop="45618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTACATTGCTCAACTATAAACCCTAGAAGAAATGTTGAGAAGAAGAATCACTTCACTACTATCATCGTCTTCACTCCAAAATGTTCCAATCTACGGCGAACCCATCAAGATTTCTCAACCCATATTCACATCTTCACAAAAGTTACCACTTTTGCAATTCTCTCAACGCCCCATCTCCAGCATTGGATCATTGGGGTGTCAGTTTCGCAGAGCTTACAGTCTTCTGAGCCTAAATGATTTGCAAGATAACAAAGGTGCTAGGAAGCAGAAGACTCGGAAGGGAAGAGGTATTGGGTCTGGTAAAGGGAAGACGGCGGGTCGTGGACATAAGGGTCAGAAAGCTAGAGGGACGTATAAGTTCGGGTTTGAAGGTGGACAGACCCCACTTCGTCGCCGTGTGCCTAAACGTGGATTTAAGAACCCGTTCAGTCTCACATTTCAGGTATTTTTACTCTTGGGTATTGGATTTTGGTTTTATTTTTCAGCAGTTGATTGATTTCGTGCTTATAGCTGGGATCACGTCAAAGTTCAAATTTTGAATGGTTTGAACGTTCTCTTGAAAGTTACATAAAATAACTTTTTAAAAATGATTATGATAGAAGGTAGAGCATTCATTGAGTAAATATTTCATTTTATAAATTAGTTTCTAGTTTGGTTGCTGATAGACTAAAGGAATAATTGTTCCATAACCAGGGTTGTACTTTTTGTTAACGCATAGAATCAAAAGAAAGTAGGACATGTAAAATGGGAGTGGCAGTTTAGAAAATTTGGTAGTTTGTTTGTGTTTTATGCGAAGATTGTATAGAATTAGCCATTTGGTGTTATGTTATTGTGTCTGTTTGTACTTTTTAGCTATGTAGTACTTTCTGTTAGCGCGAATTTCAACTTTCTTGATTTCAGACTCTGTAGCTTCTTCTTTCCTAGAAATGTTATTGTTGTGTAGTGATCCAGTAATAAGGGTAGGTCTTGACTCACTCATAGGAGTGGGGTTTTTACCTCGTGCGCACTCAAAGGGTAGCAGCTGTGGATTTCCCTTGATGTATAAAAAAAAGCCATCTGTGATCTTAAGCTCTTCAAGTTGTAGCTTTTGATGTGTGTGTCATCAATCAGAACTTGTTCCTTTATTGGATCATAGAATCTGTCTATCAAGCCAATAATGGTGGATTTTCCAGAACCACTTTGCCCAACAAGTAGTACTGTTTTCCAGATTCGTCCCTGGGAAGATTGATTGATCAAGCTTAGAAGGATGATAAAAGAAGACATTCTTCTGCTCTATCTTTCCTCTTTATACCTTTGTGACATAAAGCCCTTCAGGATTCTCAAGTTCAATCTCAGTCTTCGATCGAAGACAGCATATACAGATGCAATGGCACTGCTACCTGTTGCCAATTCAGAAGTCATACTTTCAGAATCTGCTATATTTTTCCCCGTACTCATCAAAAGGAACAAAACTTGAAATAGTTGCTATGAACCGAGTAAGTTTTGTCCATTAGTCTTCCCCATACCAATATGTTAGGGCAATGGCAACTGCAGTTAGAAATTGAGAGCAAAAGAAGCCAGCACCAGAAAGTAGCGACTGTCTAATATTTTCTTTTCTGGGGCTTCCTGAGATCCTTTAAAGCGGTCTAACATTCTATATTGAGAAGAGAAGGGTGTGATAGTCCTTTGATTGATCACTGCTTCACTTGCTAGCTTGAAGAAGTTATCTAAGAGTAAAGGTTGTATAGATATTAGTACAACTTCTACTTAAATATGTTGTTTGCACCATACAGGTGCCATCAATTATCATGACAGGAGGCGGCACATCTTTTTCTTACTAAAATTCCCCCTTTTTTGGATGATATGTGGTTAAATACGTCACTAATTATTTTATCATTGAGTCAACATATGTGAATATTTGTTTAGTTATTAAAACCAAGATGGCTTAACACCTTGGAGTAATGTTAGTGGTTCTCTTCTGATTAGTTGTTCTTTGTTTATGTGCTCCATGCAGCCAGTTGGGTTGGGAAAGATTGCAAATCTGATAAATGCTGGGAAGATTGACTCGTCAGAGTTGATCACAATGAAAACTCTAAAGGTAATTGTAGATTATGGTATAACTATAGCATTATATGGTATAACTATAGCATTATATGGTATAACTATAGCATTATATTGCTTAATCATTTAGCACCTTCCTTTACAAAACAACTTCTTGGGCCAATAGGATTCCGGTGCAATAGGGAAGCAAATAGAAGATGGAGCCAGGTTGATGGGGCGTGGGGCTGAACTTATTCAATGGCCCATCCATCT</genome_strand>
        <mrna_strand>GATTACATTGCTCAACTATAAACCCTAGAAGAAATGTTGAGAAGAAGAATCACTTCACTACTATCATCGTCTTCACTCCAAAATGTTCCAATCTACGGCGAACCCATCAAGATTTCTCAACCCATATTCACATCTTCACAAAAGTTACCACTTTTGCAATTCTCTCAACGCCCCATCTCCAGCATTGGATCATTGGGGTGTCAGTTTCGCAGAGCTTACAGTCTTCTGAGCCTAAATGATTTGCAAGATAACAAAGGTGCTAGGAAGCAGAAGACTCGGAAGGGAAGAGGTATTGGGTCTGGTAAAGGGAAGACGGCGGGTCGTGGACATAAGGGTCAGAAAGCTAGAGGGACGTATAAGTTCGGGTTTGAAGGTGGACAGACCCCACTTCGTCGCCGTGTGCCTAAACGTGGATTTAAGAACCCGTTCAGTCTCACATTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTGGGTTGGGAAAGATTGCAAATCTGATAAATGCTGGGAAGATTGACTCGTCAGAGTTGATCACAATGAAAACTCTAAAG.................................................................................................................................GATTCCGGTGCAATAGGGAAGCAAATAGAAGATGGAGCCAGGTTGATGGGGCGTGGGGCTGAACTTATTCAATGGCCCATCCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="T0735" ref_strand="+" ref_description="T0735">
      <seq>ggcattgcacctgaatcaaaggcaacgacagagagtgtatataatgcagctttggctttagggatcgcaaatcaactaaccaatatactcagagatgtaggagaagatgcaagaagaggaagagtatacttacctcaagatgaattagcacaggcagggctctccgatgaagacatatttgctggaaaggtgactgataagtggagaatctttatgaagaagcaaatccagagggcaaggaaattctttgatgaggcagagaaaggtgtcacagaactgagttctgctagtagatggccggtgttggcatcgttgctgttatatcgcaagatactggacgagattgaagcaaacgactacaacaacttcacaaggagggcttatgtgagcaagccaaagaagcttctgacgttgcccattgcttatgcaagatctctagtgccccctaagtcaacttcttccccactagcaaagacatgaatgaagtttctaaatgccaattagaggcctatacatacactaaagaaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0144P17-dWneh/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02HBa0144P17.1" temp_strand="+" temp_description="C02HBa0144P17.1  AC226509.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0144P17 sequenced_by:kribb upload_account_name:korea">
        <position start="58579" stop="60334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58879" g_stop="58985" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58986" i_stop="59212" i_length="227">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59213" g_stop="59405" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="300" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59406" i_stop="59803" i_length="398">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59804" g_stop="60034" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="531" r_length="231" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0144P17.1" gen_strand="+" ref_id="T0735" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0144P17.1" gen_strand="+"/>
        <rDNA rDNA_id="T0735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58879" e_stop="58985"/>
          <exon e_start="59213" e_stop="59405"/>
          <exon e_start="59804" e_stop="60034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATTGCACCTGAATCAAAGGCAACGACAGAGAGTGTATATAATGCAGCTTTGGCTTTAGGGATCGCAAATCAACTAACCAATATACTCAGAGATGTAGGAGAAGAGTAAGTACAAAGCTATATTTAGTTCATATTGATCATTTCCCAAGTAACATGCCAAAATATATCGAAAGAGTAGTCTATTTCTCAGATACAAGTTCAGTGTAATGCCTATTGCTCCATGTTGTTTCTAAAAAGTCACAGGCGACTTTGCCATTCTATTTGTTTCAGTTTATTTTGAAGTACAATGTATTCAGTGCTTAAAATGCCTTAACATATTTCTTTTTGTACAGTGCAAGAAGAGGAAGAGTATACTTACCTCAAGATGAATTAGCACAGGCAGGGCTCTCCGATGAAGACATATTTGCTGGAAAGGTGACTGATAAGTGGAGAATCTTTATGAAGAAGCAAATCCAGAGGGCAAGGAAATTCTTTGATGAGGCAGAGAAAGGTGTCACAGAACTGAGTTCTGCTAGTAGATGGCCGGTATGTAGTCATAAAGTTACATGAATACAAATACAATTGATCGTTTGCATCTGCTACTTTTTCTTTTATTGTTATATTAGTAAGGAAAAGGCAATTCGAACTAAATCTTTCATAGTGACACAACACATTCCATCACATTGTTACACAAAGCATAATAAACTTCAGTCCAGAAAATAGTTCCGTCTCATTTGACTATAATTTGTATGGACTAATTGACATCAAGTTCTTAAATCTGCTCAAACCTTCTCTGTAATGTGCTGCTTATGTTCCTACATCACAGAGGAAAGAGATCTTGATCGACGTGCCTAGGCAATTATGGTCTAGTTTAGCATTGAACTTACATTGTGAAATCTTTGTTCTAGTATGAAGAATGAGCAGACTCTTTTTTGTTACTGCAGGTGTTGGCATCGTTGCTGTTATATCGCAAGATACTGGACGAGATTGAAGCAAACGACTACAACAACTTCACAAGGAGGGCTTATGTGAGCAAGCCAAAGAAGCTTCTGACGTTGCCCATTGCTTATGCAAGATCTCTAGTGCCCCCTAAGTCAACTTCTTCCCCACTAGCAAAGACATGAATGAAGTTTCTAAATGCCAATTAGAGGCCTATACATACACTAAAGAAAACA</genome_strand>
        <mrna_strand>GGCATTGCACCTGAATCAAAGGCAACGACAGAGAGTGTATATAATGCAGCTTTGGCTTTAGGGATCGCAAATCAACTAACCAATATACTCAGAGATGTAGGAGAAGA...................................................................................................................................................................................................................................TGCAAGAAGAGGAAGAGTATACTTACCTCAAGATGAATTAGCACAGGCAGGGCTCTCCGATGAAGACATATTTGCTGGAAAGGTGACTGATAAGTGGAGAATCTTTATGAAGAAGCAAATCCAGAGGGCAAGGAAATTCTTTGATGAGGCAGAGAAAGGTGTCACAGAACTGAGTTCTGCTAGTAGATGGCCG..............................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGCATCGTTGCTGTTATATCGCAAGATACTGGACGAGATTGAAGCAAACGACTACAACAACTTCACAAGGAGGGCTTATGTGAGCAAGCCAAAGAAGCTTCTGACGTTGCCCATTGCTTATGCAAGATCTCTAGTGCCCCCTAAGTCAACTTCTTCCCCACTAGCAAAGACATGAATGAAGTTTCTAAATGCCAATTAGAGGCCTATACATACACTAAAGAAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>6</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="26852" PGL_stop="28872"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26852" e_stop="27164"/>
            <exon e_start="28456" e_stop="28872"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26852" e_stop="27164" e_length="313"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.975">
            <gDNA_intron_boundary i_start="27165" i_stop="28455" i_length="1291"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="28456" e_stop="28872" e_length="417"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26852" stop="27164"/>
              <exon start="28456" stop="28872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="C2_At1g65900" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTAGAAAGTATTATAAGTGTTCGCATTTCTTTCACCCCTTCACTAAATCCCCTAGCCTAATTTTGTCAGTGTATGTGCACATAAATATGTATTTACTCACACATTTTTCTACTAATTTGTATGTGGTGCAAATTTTGTTTGTTTTGTTGTGGTGCATTCAGAGTTTAGACTATGCAAATGCAGCAATTCCAACAGTGAAAGTTGGGAATATATCAAAAGTGGGAGATTCTGCATATTTTAGGATATACTATGGACAAACCTTCAAAGTTATTAAGAACACCCTTGATGGAAAGAGTTATCTTCTTATCCAG : AACAACACAAGAATGGCCAGTAGAACAAAATATTGCACCTCAAGAATAAAGTCTTTTGTTATCCCACTAGCAAACTACTCGATCGAGACTGACTACTTTTTTCCAGGTACACCATTTTTAACCATCCTCCTTGTTTTTTTTCCCACTTTATAACATCATATTATAAGCTTTATATGTCTTTTTGGTACGCGTTGATAACTCATGCACTGACTGTTTCTCTCTTTTTCTTCTCTTTCTTTCCTTCAATTCACAGTTTCCTTTTTCGAGGTAAGAATGCACAGTTTTAGTATTATTCTGATAGCTGTATTACTAGATTGAAAATTTTTGCGTGGAATATTGCAGCTTCTAGGCCTATTGGGAAACTTGAAAGGCATAACATCAACATACGTGGCCTCCCAATGTGTACTGAAACTATAC</gDNA_template>
            <first_frame> F  *  K  V  L  *  V  F  A  F  L  S  P  L  H  *  I  P  *  P  N  F  V  S  V  C  A  H  K  Y  V  F  T  H  T  F  F  Y  *  F  V  C  G  A  N  F  V  C  F  V  V  V  H  S  E  F  R  L  C  K  C  S  N  S  N  S  E  S  W  E  Y  I  K  S  G  R  F  C  I  F  *  D  I  L  W  T  N  L  Q  S  Y  *  E  H  P  *  W  K  E  L  S  S  Y  P   : E  Q  H  K  N  G  Q  *  N  K  I  L  H  L  K  N  K  V  F  C  Y  P  T  S  K  L  L  D  R  D  *  L  L  F  S  R  Y  T  I  F  N  H  P  P  C  F  F  S  H  F  I  T  S  Y  Y  K  L  Y  M  S  F  W  Y  A  L  I  T  H  A  L  T  V  S  L  F  F  F  S  F  F  P  S  I  H  S  F  L  F  R  G  K  N  A  Q  F  *  Y  Y  S  D  S  C  I  T  R  L  K  I  F  A  W  N  I  A  A  S  R  P  I  G  K  L  E  R  H  N  I  N  I  R  G  L  P  M  C  T  E  T  I  </first_frame>
            <second_frame>  F  R  K  Y  Y  K  C  S  H  F  F  H  P  F  T  K  S  P  S  L  I  L  S  V  Y  V  H  I  N  M  Y  L  L  T  H  F  S  T  N  L  Y  V  V  Q  I  L  F  V  L  L  W  C  I  Q  S  L  D  Y  A  N  A  A  I  P  T  V  K  V  G  N  I  S  K  V  G  D  S  A  Y  F  R  I  Y  Y  G  Q  T  F  K  V  I  K  N  T  L  D  G  K  S  Y  L  L  I  Q  :  N  N  T  R  M  A  S  R  T  K  Y  C  T  S  R  I  K  S  F  V  I  P  L  A  N  Y  S  I  E  T  D  Y  F  F  P  G  T  P  F  L  T  I  L  L  V  F  F  P  T  L  *  H  H  I  I  S  F  I  C  L  F  G  T  R  *  *  L  M  H  *  L  F  L  S  F  S  S  L  S  F  L  Q  F  T  V  S  F  F  E  V  R  M  H  S  F  S  I  I  L  I  A  V  L  L  D  *  K  F  L  R  G  I  L  Q  L  L  G  L  L  G  N  L  K  G  I  T  S  T  Y  V  A  S  Q  C  V  L  K  L  Y </second_frame>
            <third_frame>   L  E  S  I  I  S  V  R  I  S  F  T  P  S  L  N  P  L  A  *  F  C  Q  C  M  C  T  *  I  C  I  Y  S  H  I  F  L  L  I  C  M  W  C  K  F  C  L  F  C  C  G  A  F  R  V  *  T  M  Q  M  Q  Q  F  Q  Q  *  K  L  G  I  Y  Q  K  W  E  I  L  H  I  L  G  Y  T  M  D  K  P  S  K  L  L  R  T  P  L  M  E  R  V  I  F  L  S  R :   T  T  Q  E  W  P  V  E  Q  N  I  A  P  Q  E  *  S  L  L  L  S  H  *  Q  T  T  R  S  R  L  T  T  F  F  Q  V  H  H  F  *  P  S  S  L  F  F  F  P  L  Y  N  I  I  L  *  A  L  Y  V  F  L  V  R  V  D  N  S  C  T  D  C  F  S  L  F  L  L  F  L  S  F  N  S  Q  F  P  F  S  R  *  E  C  T  V  L  V  L  F  *  *  L  Y  Y  *  I  E  N  F  C  V  E  Y  C  S  F  *  A  Y  W  E  T  *  K  A  *  H  Q  H  T  W  P  P  N  V  Y  *  N  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0144P17.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26853" stop="27164"/>
                    <exon start="28456" stop="28608"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FRKYYKCSHFFHPFTKSPSLILSVYVHINMYLLTHFSTNLYVVQILFVLLWCIQSLDYANAAIPTVKVGNISKVGDSAYFRIYYGQTFKVIKNTLDGKSYLLIQNNTRMASRTKYCTSRIKSFVIPLANYSIETDYFFPGTPFLTILLVFFPTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="37437" PGL_stop="38065"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37437" e_stop="38065"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="37437" e_stop="38065" e_length="629"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37437" stop="38065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG454-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAGTGTAATTTAGGAAGCAAAATAAGAAAAGTATATCTCACAAGGATGTTTGGAGTAGAATGTAATGCAGGCATGCAGAAATATACCAAGTTTCTGAACTCGAGATTGTAGAAAGTATCGATGTATCTTTGCTTTGCTTGTTTCTGATCTTTGTACAATGTCCTCCAAAAAGTGTAGATTGACCCCATATTCAATACCTTGTTTGCATAGATCTTCCATGTGTAACTGCAAAATATAAGGATTAAGAAAATTTCAACCAGATATATGCCTCTCTGCAATTTGAACAATTGTTTATTTGTGAGTTACCATTCATATATACGCTTTAGACCCTGGGCTGAAATCCTGTTCCAATGCTCAGGATCCTCCTTGCACTTCTGGAAAAAATTGGCAATTTTGTTGCTTGATTCATCTCCATTATTTGGATCAATATGGAAGCCTGAAATCCCGTCAACAATAATCTCAGCAGGGCCGCCTTGGCTGGTAGCGAAGGTTGGTAATCCACAGTTCATTGCTTCAATGACTGTAAGGCCAAATGCTTCATATAAAGCAGGCTGCACAAAAGCTCCTTTTGAATCTGCTATTGTGCGGTAGAGTTCGCTATTCCTGTATCTGTCAGTCTGAGCTGCTA</gDNA_template>
            <first_frame> Q  V  *  F  R  K  Q  N  K  K  S  I  S  H  K  D  V  W  S  R  M  *  C  R  H  A  E  I  Y  Q  V  S  E  L  E  I  V  E  S  I  D  V  S  L  L  C  L  F  L  I  F  V  Q  C  P  P  K  S  V  D  *  P  H  I  Q  Y  L  V  C  I  D  L  P  C  V  T  A  K  Y  K  D  *  E  N  F  N  Q  I  Y  A  S  L  Q  F  E  Q  L  F  I  C  E  L  P  F  I  Y  T  L  *  T  L  G  *  N  P  V  P  M  L  R  I  L  L  A  L  L  E  K  I  G  N  F  V  A  *  F  I  S  I  I  W  I  N  M  E  A  *  N  P  V  N  N  N  L  S  R  A  A  L  A  G  S  E  G  W  *  S  T  V  H  C  F  N  D  C  K  A  K  C  F  I  *  S  R  L  H  K  S  S  F  *  I  C  Y  C  A  V  E  F  A  I  P  V  S  V  S  L  S  C   </first_frame>
            <second_frame>  K  C  N  L  G  S  K  I  R  K  V  Y  L  T  R  M  F  G  V  E  C  N  A  G  M  Q  K  Y  T  K  F  L  N  S  R  L  *  K  V  S  M  Y  L  C  F  A  C  F  *  S  L  Y  N  V  L  Q  K  V  *  I  D  P  I  F  N  T  L  F  A  *  I  F  H  V  *  L  Q  N  I  R  I  K  K  I  S  T  R  Y  M  P  L  C  N  L  N  N  C  L  F  V  S  Y  H  S  Y  I  R  F  R  P  W  A  E  I  L  F  Q  C  S  G  S  S  L  H  F  W  K  K  L  A  I  L  L  L  D  S  S  P  L  F  G  S  I  W  K  P  E  I  P  S  T  I  I  S  A  G  P  P  W  L  V  A  K  V  G  N  P  Q  F  I  A  S  M  T  V  R  P  N  A  S  Y  K  A  G  C  T  K  A  P  F  E  S  A  I  V  R  *  S  S  L  F  L  Y  L  S  V  *  A  A  </second_frame>
            <third_frame>   S  V  I  *  E  A  K  *  E  K  Y  I  S  Q  G  C  L  E  *  N  V  M  Q  A  C  R  N  I  P  S  F  *  T  R  D  C  R  K  Y  R  C  I  F  A  L  L  V  S  D  L  C  T  M  S  S  K  K  C  R  L  T  P  Y  S  I  P  C  L  H  R  S  S  M  C  N  C  K  I  *  G  L  R  K  F  Q  P  D  I  C  L  S  A  I  *  T  I  V  Y  L  *  V  T  I  H  I  Y  A  L  D  P  G  L  K  S  C  S  N  A  Q  D  P  P  C  T  S  G  K  N  W  Q  F  C  C  L  I  H  L  H  Y  L  D  Q  Y  G  S  L  K  S  R  Q  Q  *  S  Q  Q  G  R  L  G  W  *  R  R  L  V  I  H  S  S  L  L  Q  *  L  *  G  Q  M  L  H  I  K  Q  A  A  Q  K  L  L  L  N  L  L  L  C  G  R  V  R  Y  S  C  I  C  Q  S  E  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0144P17.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37663" stop="38028"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>363</number_coding_nucleotides>
                  <number_encoded_amino_acids>121</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQNIRIKKISTRYMPLCNLNNCLFVSYHSYIRFRPWAEILFQCSGSSLHFWKKLAILLLDSSPLFGSIWKPEIPSTIISAGPPWLVAKVGNPQFIASMTVRPNASYKAGCTKAPFESAIVR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="38796" PGL_stop="38199"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38796" e_stop="38199"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="38796" e_stop="38199" e_length="598"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38796" stop="38199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG454-F" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCAGATTTTGTTATCACAAGCACATATCAAGAAATAGCTGGAAGGTAAGAATTAGAGAGAATAAGTAATGCATTAATATGATAGAATTGAATACACATCAGAAATCCAGTTATGTATTTGCTCAAATTATTGAAATTTCATGGATCTCATTCTTATGTGCTAACATTTGCAGCAAAGACAGGCCAGGGCAATATGAAAGTCACAGTGCATTTACCCTTCCAGGGCTTTATAGAGTTGCTTCAGGCATCAATGTCTTTGATCCTAAATTTAACATTGCTGCTCCTGGGGCAGACCAGTCAGTATATTTCCCTTACACAGAAAAGCAGAAGCGTTTGACTGATTTCAGACCTGCCATTGAGAAGCTTCTTTTTAGTAAAGTGGATAATGACGAGCACATGTAAGTCTTAGTGCTCAAACTTCAGTTTAGTGCCAATAGGAATATCCCACAGTTCTACGTATTAATGTTTTACTTCTTTCAACCACAGTGGATATTTAGAAGACAGAACGAAGCCTATCCTCTTCACCATGGCAAGGCTGGACACAGTGAAGAACACAACTGGACTAACTGAATGGTTTGGCAAGAACAAGAAGCTCAGA</gDNA_template>
            <first_frame> C  R  F  C  Y  H  K  H  I  S  R  N  S  W  K  V  R  I  R  E  N  K  *  C  I  N  M  I  E  L  N  T  H  Q  K  S  S  Y  V  F  A  Q  I  I  E  I  S  W  I  S  F  L  C  A  N  I  C  S  K  D  R  P  G  Q  Y  E  S  H  S  A  F  T  L  P  G  L  Y  R  V  A  S  G  I  N  V  F  D  P  K  F  N  I  A  A  P  G  A  D  Q  S  V  Y  F  P  Y  T  E  K  Q  K  R  L  T  D  F  R  P  A  I  E  K  L  L  F  S  K  V  D  N  D  E  H  M  *  V  L  V  L  K  L  Q  F  S  A  N  R  N  I  P  Q  F  Y  V  L  M  F  Y  F  F  Q  P  Q  W  I  F  R  R  Q  N  E  A  Y  P  L  H  H  G  K  A  G  H  S  E  E  H  N  W  T  N  *  M  V  W  Q  E  Q  E  A  Q  </first_frame>
            <second_frame>  A  D  F  V  I  T  S  T  Y  Q  E  I  A  G  R  *  E  L  E  R  I  S  N  A  L  I  *  *  N  *  I  H  I  R  N  P  V  M  Y  L  L  K  L  L  K  F  H  G  S  H  S  Y  V  L  T  F  A  A  K  T  G  Q  G  N  M  K  V  T  V  H  L  P  F  Q  G  F  I  E  L  L  Q  A  S  M  S  L  I  L  N  L  T  L  L  L  L  G  Q  T  S  Q  Y  I  S  L  T  Q  K  S  R  S  V  *  L  I  S  D  L  P  L  R  S  F  F  L  V  K  W  I  M  T  S  T  C  K  S  *  C  S  N  F  S  L  V  P  I  G  I  S  H  S  S  T  Y  *  C  F  T  S  F  N  H  S  G  Y  L  E  D  R  T  K  P  I  L  F  T  M  A  R  L  D  T  V  K  N  T  T  G  L  T  E  W  F  G  K  N  K  K  L  R </second_frame>
            <third_frame>   Q  I  L  L  S  Q  A  H  I  K  K  *  L  E  G  K  N  *  R  E  *  V  M  H  *  Y  D  R  I  E  Y  T  S  E  I  Q  L  C  I  C  S  N  Y  *  N  F  M  D  L  I  L  M  C  *  H  L  Q  Q  R  Q  A  R  A  I  *  K  S  Q  C  I  Y  P  S  R  A  L  *  S  C  F  R  H  Q  C  L  *  S  *  I  *  H  C  C  S  W  G  R  P  V  S  I  F  P  L  H  R  K  A  E  A  F  D  *  F  Q  T  C  H  *  E  A  S  F  *  *  S  G  *  *  R  A  H  V  S  L  S  A  Q  T  S  V  *  C  Q  *  E  Y  P  T  V  L  R  I  N  V  L  L  L  S  T  T  V  D  I  *  K  T  E  R  S  L  S  S  S  P  W  Q  G  W  T  Q  *  R  T  Q  L  D  *  L  N  G  L  A  R  T  R  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0144P17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38727" stop="38395"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CINMIELNTHQKSSYVFAQIIEISWISFLCANICSKDRPGQYESHSAFTLPGLYRVASGINVFDPKFNIAAPGADQSVYFPYTEKQKRLTDFRPAIEKLLFSKVDNDEHM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0144P17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38705" stop="38460"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IHIRNPVMYLLKLLKFHGSHSYVLTFAAKTGQGNMKVTVHLPFQGFIELLQASMSLILNLTLLLLGQTSQYISLTQKSRSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="47911" PGL_stop="44793"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47911" e_stop="47468"/>
            <exon e_start="45916" e_stop="45833"/>
            <exon e_start="45703" e_stop="45614"/>
            <exon e_start="44896" e_stop="44793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47911" e_stop="47468" e_length="444"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47467" i_stop="45917" i_length="1551"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="45916" e_stop="45833" e_length="84"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="45832" i_stop="45704" i_length="129"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="45703" e_stop="45614" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="45613" i_stop="44897" i_length="717"/>
          </intron>
          <exon e_serial="4" e_score="0.952">
            <gDNA_exon_boundary e_start="44896" e_stop="44793" e_length="104"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47911" stop="47468"/>
              <exon start="45916" stop="45833"/>
              <exon start="45703" stop="45618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="T1051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47910" stop="47468"/>
              <exon start="45916" stop="45833"/>
              <exon start="45703" stop="45614"/>
              <exon start="44896" stop="44793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="C2_At5g64670" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTACATTGCTCAACTATAAACCCTAGAAGAAATGTTGAGAAGAAGAATCACTTCACTACTATCATCGTCTTCACTCCAAAATGTTCCAATCTACGGCGAACCCATCAAGATTTCTCAACCCATATTCACATCTTCACAAAAGTTACCACTTTTGCAATTCTCTCAACGCCCCATCTCCAGCATTGGATCATTGGGGTGTCAGTTTCGCAGAGCTTACAGTCTTCTGAGCCTAAATGATTTGCAAGATAACAAAGGTGCTAGGAAGCAGAAGACTCGGAAGGGAAGAGGTATTGGGTCTGGTAAAGGGAAGACGGCGGGTCGTGGACATAAGGGTCAGAAAGCTAGAGGGACGTATAAGTTCGGGTTTGAAGGTGGACAGACCCCACTTCGTCGCCGTGTGCCTAAACGTGGATTTAAGAACCCGTTCAGTCTCACATTTCAG : CCAGTTGGGTTGGGAAAGATTGCAAATCTGATAAATGCTGGGAAGATTGACTCGTCAGAGTTGATCACAATGAAAACTCTAAAG : GATTCCGGTGCAATAGGGAAGCAAATAGAAGATGGAGCCAGGTTGATGGGGCGTGGGGCTGAACTTATTCAATGGCCCATCCATCTAGAG : GTTTCAAGGGTGACCGCTAGAGCTAAAGCAGCTGTGGAAGCAGCGGGTGGGTCTGTAAGGAGAGTGCATTACAACAAACTTGGGTTGCGGGCACTACTGAAGCC</gDNA_template>
            <first_frame> D  Y  I  A  Q  L  *  T  L  E  E  M  L  R  R  R  I  T  S  L  L  S  S  S  S  L  Q  N  V  P  I  Y  G  E  P  I  K  I  S  Q  P  I  F  T  S  S  Q  K  L  P  L  L  Q  F  S  Q  R  P  I  S  S  I  G  S  L  G  C  Q  F  R  R  A  Y  S  L  L  S  L  N  D  L  Q  D  N  K  G  A  R  K  Q  K  T  R  K  G  R  G  I  G  S  G  K  G  K  T  A  G  R  G  H  K  G  Q  K  A  R  G  T  Y  K  F  G  F  E  G  G  Q  T  P  L  R  R  R  V  P  K  R  G  F  K  N  P  F  S  L  T  F  Q  :  P  V  G  L  G  K  I  A  N  L  I  N  A  G  K  I  D  S  S  E  L  I  T  M  K  T  L  K  :  D  S  G  A  I  G  K  Q  I  E  D  G  A  R  L  M  G  R  G  A  E  L  I  Q  W  P  I  H  L  E  :  V  S  R  V  T  A  R  A  K  A  A  V  E  A  A  G  G  S  V  R  R  V  H  Y  N  K  L  G  L  R  A  L  L  K   </first_frame>
            <second_frame>  I  T  L  L  N  Y  K  P  *  K  K  C  *  E  E  E  S  L  H  Y  Y  H  R  L  H  S  K  M  F  Q  S  T  A  N  P  S  R  F  L  N  P  Y  S  H  L  H  K  S  Y  H  F  C  N  S  L  N  A  P  S  P  A  L  D  H  W  G  V  S  F  A  E  L  T  V  F  *  A  *  M  I  C  K  I  T  K  V  L  G  S  R  R  L  G  R  E  E  V  L  G  L  V  K  G  R  R  R  V  V  D  I  R  V  R  K  L  E  G  R  I  S  S  G  L  K  V  D  R  P  H  F  V  A  V  C  L  N  V  D  L  R  T  R  S  V  S  H  F  S :   Q  L  G  W  E  R  L  Q  I  *  *  M  L  G  R  L  T  R  Q  S  *  S  Q  *  K  L  *  R :   I  P  V  Q  *  G  S  K  *  K  M  E  P  G  *  W  G  V  G  L  N  L  F  N  G  P  S  I  *  R :   F  Q  G  *  P  L  E  L  K  Q  L  W  K  Q  R  V  G  L  *  G  E  C  I  T  T  N  L  G  C  G  H  Y  *  S  </second_frame>
            <third_frame>   L  H  C  S  T  I  N  P  R  R  N  V  E  K  K  N  H  F  T  T  I  I  V  F  T  P  K  C  S  N  L  R  R  T  H  Q  D  F  S  T  H  I  H  I  F  T  K  V  T  T  F  A  I  L  S  T  P  H  L  Q  H  W  I  I  G  V  S  V  S  Q  S  L  Q  S  S  E  P  K  *  F  A  R  *  Q  R  C  *  E  A  E  D  S  E  G  K  R  Y  W  V  W  *  R  E  D  G  G  S  W  T  *  G  S  E  S  *  R  D  V  *  V  R  V  *  R  W  T  D  P  T  S  S  P  C  A  *  T  W  I  *  E  P  V  Q  S  H  I  S   : A  S  W  V  G  K  D  C  K  S  D  K  C  W  E  D  *  L  V  R  V  D  H  N  E  N  S  K   : G  F  R  C  N  R  E  A  N  R  R  W  S  Q  V  D  G  A  W  G  *  T  Y  S  M  A  H  P  S  R   : G  F  K  G  D  R  *  S  *  S  S  C  G  S  S  G  W  V  C  K  E  S  A  L  Q  Q  T  W  V  A  G  T  T  E  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0144P17.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47890" stop="47468"/>
                    <exon start="45916" stop="45833"/>
                    <exon start="45703" stop="45614"/>
                    <exon start="44896" stop="44795"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLEEMLRRRITSLLSSSSLQNVPIYGEPIKISQPIFTSSQKLPLLQFSQRPISSIGSLGCQFRRAYSLLSLNDLQDNKGARKQKTRKGRGIGSGKGKTAGRGHKGQKARGTYKFGFEGGQTPLRRRVPKRGFKNPFSLTFQPVGLGKIANLINAGKIDSSELITMKTLKDSGAIGKQIEDGARLMGRGAELIQWPIHLEVSRVTARAKAAVEAAGGSVRRVHYNKLGLRALLK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="58879" PGL_stop="60034"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58879" e_stop="58985"/>
            <exon e_start="59213" e_stop="59405"/>
            <exon e_start="59804" e_stop="60034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58879" e_stop="58985" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58986" i_stop="59212" i_length="227"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59213" e_stop="59405" e_length="193"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="59406" i_stop="59803" i_length="398"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="59804" e_stop="60034" e_length="231"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58879" stop="58985"/>
              <exon start="59213" stop="59405"/>
              <exon start="59804" stop="60034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="T0735" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCATTGCACCTGAATCAAAGGCAACGACAGAGAGTGTATATAATGCAGCTTTGGCTTTAGGGATCGCAAATCAACTAACCAATATACTCAGAGATGTAGGAGAAGA : TGCAAGAAGAGGAAGAGTATACTTACCTCAAGATGAATTAGCACAGGCAGGGCTCTCCGATGAAGACATATTTGCTGGAAAGGTGACTGATAAGTGGAGAATCTTTATGAAGAAGCAAATCCAGAGGGCAAGGAAATTCTTTGATGAGGCAGAGAAAGGTGTCACAGAACTGAGTTCTGCTAGTAGATGGCCG : GTGTTGGCATCGTTGCTGTTATATCGCAAGATACTGGACGAGATTGAAGCAAACGACTACAACAACTTCACAAGGAGGGCTTATGTGAGCAAGCCAAAGAAGCTTCTGACGTTGCCCATTGCTTATGCAAGATCTCTAGTGCCCCCTAAGTCAACTTCTTCCCCACTAGCAAAGACATGAATGAAGTTTCTAAATGCCAATTAGAGGCCTATACATACACTAAAGAAAACA</gDNA_template>
            <first_frame> G  I  A  P  E  S  K  A  T  T  E  S  V  Y  N  A  A  L  A  L  G  I  A  N  Q  L  T  N  I  L  R  D  V  G  E  D :   A  R  R  G  R  V  Y  L  P  Q  D  E  L  A  Q  A  G  L  S  D  E  D  I  F  A  G  K  V  T  D  K  W  R  I  F  M  K  K  Q  I  Q  R  A  R  K  F  F  D  E  A  E  K  G  V  T  E  L  S  S  A  S  R  W  P  :  V  L  A  S  L  L  L  Y  R  K  I  L  D  E  I  E  A  N  D  Y  N  N  F  T  R  R  A  Y  V  S  K  P  K  K  L  L  T  L  P  I  A  Y  A  R  S  L  V  P  P  K  S  T  S  S  P  L  A  K  T  *  M  K  F  L  N  A  N  *  R  P  I  H  T  L  K  K  T </first_frame>
            <second_frame>  A  L  H  L  N  Q  R  Q  R  Q  R  V  Y  I  M  Q  L  W  L  *  G  S  Q  I  N  *  P  I  Y  S  E  M  *  E  K   : M  Q  E  E  E  E  Y  T  Y  L  K  M  N  *  H  R  Q  G  S  P  M  K  T  Y  L  L  E  R  *  L  I  S  G  E  S  L  *  R  S  K  S  R  G  Q  G  N  S  L  M  R  Q  R  K  V  S  Q  N  *  V  L  L  V  D  G  R :   C  W  H  R  C  C  Y  I  A  R  Y  W  T  R  L  K  Q  T  T  T  T  T  S  Q  G  G  L  M  *  A  S  Q  R  S  F  *  R  C  P  L  L  M  Q  D  L  *  C  P  L  S  Q  L  L  P  H  *  Q  R  H  E  *  S  F  *  M  P  I  R  G  L  Y  I  H  *  R  K   </second_frame>
            <third_frame>   H  C  T  *  I  K  G  N  D  R  E  C  I  *  C  S  F  G  F  R  D  R  K  S  T  N  Q  Y  T  Q  R  C  R  R  R  :  C  K  K  R  K  S  I  L  T  S  R  *  I  S  T  G  R  A  L  R  *  R  H  I  C  W  K  G  D  *  *  V  E  N  L  Y  E  E  A  N  P  E  G  K  E  I  L  *  *  G  R  E  R  C  H  R  T  E  F  C  *  *  M  A   : G  V  G  I  V  A  V  I  S  Q  D  T  G  R  D  *  S  K  R  L  Q  Q  L  H  K  E  G  L  C  E  Q  A  K  E  A  S  D  V  A  H  C  L  C  K  I  S  S  A  P  *  V  N  F  F  P  T  S  K  D  M  N  E  V  S  K  C  Q  L  E  A  Y  T  Y  T  K  E  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0144P17.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58879" stop="58985"/>
                    <exon start="59213" stop="59405"/>
                    <exon start="59804" stop="59983"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIAPESKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRIFMKKQIQRARKFFDEAEKGVTELSSASRWPVLASLLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIAYARSLVPPKSTSSPLAKT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 87 chains have been computed
$ 
$ memory statistics:
$ 13456 bytes spliced alignments in total
$ 6 spliced alignments have been stored
$ 2242 bytes was the average size of a spliced alignment
$ 10424 bytes predicted gene locations in total
$ 5 predicted gene locations have been stored
$ 2084 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 90 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:22:36
-->
