<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2006-11-03 16:14:09"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E442090" ref_strand="+" ref_description="SGN-E442090 	[cSTA-31-N18]">
      <seq>agtccaagaagctaaaggtctgatcaggagcaaccttttggagacaaatcaagctgtagtatatagtgaacctgagaaaaaagtcatgtcgcgatccggggatgagtgtgttgtggctttgactgatcaatggtatatcacttatggagaatcagaatggaggaaggctgcagaggagtgtttggccagtatgaatctctactctgatgagacacgacatggctttgagcacactctcagctggcttaatcagtgggcttgttctcgcagttttgggcttggaactcgtattccttgggatgaggaattcttagtcgaatccttatccgattccactatttatatggcatattacacagtggcacacttcttgcagaaaggggacatgtatggtaatgatcattcttcagtgaaaccagagcacttgacagatgatgtctgggaattcttgttctgtgatgggccttttcctgaaaattcttctatatcttcttctcttctaaggagatgaagcangaatttctctactggtatccattggatctcagagtttctggcaaggatcttattcagaatcatcttaccttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="1" stop="974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84" g_stop="674" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E442090" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E442090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84" e_stop="674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCAAGAAGCAAAAGGTCTGATCAGGAGCAACCTTTTGGAGTCAAATCAAGCTGTAGTATATAGTGAACCTGAGAAAAAAGTCATGTCGCGATCCGGGGATGAGTGTGTTGTGGCTTTGACTGATCAATGGTATATCACTTATGGAGAATCAGAATGGAGGAAGGCTGCAGAGGAGTGTCTGGCCAATATGAATCTCTACTCTGATGAGACACGACATGGCTTTGAGCACACTCTCAGCTGGCTTAATCAGTGGGCTTGTTCTCGCAGTTTTGGGCTTGGAACTCGTATTCCTTGGGATGAGGAATTCTTAGTTGAGTCCTTGTCCGATTCCACTATTTATATGGCATATTACACAGTGGCACACTTCTTGCAGAAAGGGGACATGTATGGTAATGATCGTTCTTCAGTGAAACCAGAGCACTTGACAGATGAGGTCTGGGAATTCTTGTTCTGTGATGGGCCTTTTCCTGAAAATTCTTATATATCTTCTTCTCTTCTAAAGGAGATGAAGCAGGAATTTCTCTACTGGTATCCATTCGATCTTAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTG</genome_strand>
        <mrna_strand>AGTCCAAGAAGCTAAAGGTCTGATCAGGAGCAACCTTTTGGAGACAAATCAAGCTGTAGTATATAGTGAACCTGAGAAAAAAGTCATGTCGCGATCCGGGGATGAGTGTGTTGTGGCTTTGACTGATCAATGGTATATCACTTATGGAGAATCAGAATGGAGGAAGGCTGCAGAGGAGTGTTTGGCCAGTATGAATCTCTACTCTGATGAGACACGACATGGCTTTGAGCACACTCTCAGCTGGCTTAATCAGTGGGCTTGTTCTCGCAGTTTTGGGCTTGGAACTCGTATTCCTTGGGATGAGGAATTCTTAGTCGAATCCTTATCCGATTCCACTATTTATATGGCATATTACACAGTGGCACACTTCTTGCAGAAAGGGGACATGTATGGTAATGATCATTCTTCAGTGAAACCAGAGCACTTGACAGATGATGTCTGGGAATTCTTGTTCTGTGATGGGCCTTTTCCTGAAAATTCTTCTATATCTTCTTCTCTTCT-AAGGAGATGAAGCANGAATTTCTCTACTGGTATCCATTGGATCTCAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E445415" ref_strand="+" ref_description="SGN-E445415 	[cSTA-45-O20]">
      <seq>ggcttgttctcgcagttttgggcttggaactcgtattccttgggatgaggaattcttagtcgaatccttatccgattccactatttatatggcatattacacagtggcacacttcttgcagaaaggggacatgtatggtaatgatcattcttcagtgaaaccagagcacttgacagatgatgtctgggaattcttgttctgtgatgggccttttcctgaaaattcttctatatcttcttctcttctaaaggagatgaagcaggaatttctctactggtatccattggatctcagagtttctggcaaggatcttattcagaatcatcttaccttttgcatctataaccacactgccctcttccctaagcaccactggccacgtggtttcagatgcaatgggcatataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="39" stop="1046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="339" g_stop="746" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E445415" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E445415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="339" e_stop="746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTTGTTCTCGCAGTTTTGGGCTTGGAACTCGTATTCCTTGGGATGAGGAATTCTTAGTTGAGTCCTTGTCCGATTCCACTATTTATATGGCATATTACACAGTGGCACACTTCTTGCAGAAAGGGGACATGTATGGTAATGATCGTTCTTCAGTGAAACCAGAGCACTTGACAGATGAGGTCTGGGAATTCTTGTTCTGTGATGGGCCTTTTCCTGAAAATTCTTATATATCTTCTTCTCTTCTAAAGGAGATGAAGCAGGAATTTCTCTACTGGTATCCATTCGATCTTAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAAT</genome_strand>
        <mrna_strand>GGCTTGTTCTCGCAGTTTTGGGCTTGGAACTCGTATTCCTTGGGATGAGGAATTCTTAGTCGAATCCTTATCCGATTCCACTATTTATATGGCATATTACACAGTGGCACACTTCTTGCAGAAAGGGGACATGTATGGTAATGATCATTCTTCAGTGAAACCAGAGCACTTGACAGATGATGTCTGGGAATTCTTGTTCTGTGATGGGCCTTTTCCTGAAAATTCTTCTATATCTTCTTCTCTTCTAAAGGAGATGAAGCAGGAATTTCTCTACTGGTATCCATTGGATCTCAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E558227" ref_strand="+" ref_description="SGN-E558227 	[17534]">
      <seq>aaaattcttctatatccttcttctcttctaaaggagatgaagcaggaatttctctactggtatccattcgatctcagagtttctggcaaggatcttattcagaatcatcttaccttttgcatctataaccacactgccctcttccctaagcaccactggccacgtggtttcagatgcaatgggcatataatgcttaactctgagaagatgtccaagtccact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="257" stop="1077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="557" g_stop="777" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E558227" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>221</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E558227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="557" e_stop="777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTCTTATATAT-CTTCTTCTCTTCTAAAGGAGATGAAGCAGGAATTTCTCTACTGGTATCCATTCGATCTTAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCTAAGTCCACT</genome_strand>
        <mrna_strand>AAAATTCTTCTATATCCTTCTTCTCTTCTAAAGGAGATGAAGCAGGAATTTCTCTACTGGTATCCATTCGATCTCAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCCAAGTCCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E480088" ref_strand="+" ref_description="SGN-E480088 	[cSTD-12-H23]">
      <seq>aatttctctactggtatccattggatctcagagtttctggcaaggatcttattcagaatcatcttaccttttgcatctataaccacactgccctcttccctaagcaccactggccacgtggtttcagatgcaatgggcatataatgcttaactctgagaagatgtccaagtccactgggaatttccgaacactccggcaggcaattgaagagttttcagctgatgccacacgcttttctcttgctgatgcgggtgatgggatggacgatgctaacttcgtctttgaaacagctaatgctgctatcttacgtcttacaaaagaaatggcatggatgcaggaagtccttgatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="302" stop="1253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="602" g_stop="953" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E480088" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="602" e_stop="953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCTCTACTGGTATCCATTCGATCTTAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCTAAGTCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAATTTTGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATAGCATGGATGCAGGAAGTCCTTGATGC</genome_strand>
        <mrna_strand>AATTTCTCTACTGGTATCCATTGGATCTCAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCCAAGTCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAACTTCGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATGGCATGGATGCAGGAAGTCCTTGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E315364" ref_strand="+" ref_description="SGN-E315364 	[cTOA-22-A1]">
      <seq>tgccctcttccctaagcaccactggccacgtggtttcagatgcaatgggcatataatgcttaactctgagaagatgtctaagtccactgggaatttccgaacactccggcaggcaattgaagagttttcagctgatgccacacgcttttctcttgctgatgcgggtgatgggatggacgatgctaattttgtctttgaaacagctaatgctgctatcttacgtcttacaaaagaaatagcatggatgcaggaagtccttgatgcagagacatctttaagaactgggcctccatccacatatgctgaccgcgtatttgctaatgaaataaatattgcagtaaggactacagagaagaactatagtgagtacatgttccgggatgctctgaaaactggtttttatgatcttcaggctgccagagatgagtataggctctcctgtggttcaggaggcatgaaccgggatttgctatggcgatttatggatgttcaaacacgacttattgctcctatctgtccacactatgctgagtatgcctggagaaagcttttgaagaaggatggttatggcatccaagctggctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="390" stop="1575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="690" g_stop="1275" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E315364" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="690" e_stop="1275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCTAAGTCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAATTTTGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATAGCATGGATGCAGGAAGTCCTTGATGCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCGCGTATTTGCTAATGAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTACATGTTCCGGGATGCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTCTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGCTCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGG</genome_strand>
        <mrna_strand>TGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCTAAGTCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAATTTTGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATAGCATGGATGCAGGAAGTCCTTGATGCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCGCGTATTTGCTAATGAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTACATGTTCCGGGATGCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTCTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGCTCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCCAAGCTGGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E264929" ref_strand="+" ref_description="SGN-E264929 	[cLEI-10-B5]">
      <seq>tccactgggaatttccgaacactccggcaggcaattgaagagttttcagctgatgccacacgcttttctcttgctgatgcgggtgatgggatggacgatgctaattttgtctttgaaacagctaatgctgctatcttacgtcttacaaaagaaatagcatggatgcaggaagtccttgatgcagagacatctttaagaactgggcctccatccacatatgctgaccgcgtatttgctaatgaaataaatattgcagtaaggactacagagaagaactatagtgagtacatgttccgggatgctctgaaaactggtttttatgatcttcaggctgccagagatgagtataggctctcctgtggttcaggaggcatgaaccgggatttgctatggcgatttatggatgttcaaacacgacttattgctcctatctgtccacactatgctgagtatgcctggagaaagcttttgaagaaggatggttatggcatcaaagctggctggccagaggctgatttgccagatcttagccttaagaaggccaacaaatatttgcaagacacgattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="472" stop="1640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="772" g_stop="1340" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E264929" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="772" e_stop="1340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAATTTTGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATAGCATGGATGCAGGAAGTCCTTGATGCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCGCGTATTTGCTAATGAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTACATGTTCCGGGATGCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTCTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGCTCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGT</genome_strand>
        <mrna_strand>TCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAATTTTGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATAGCATGGATGCAGGAAGTCCTTGATGCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCGCGTATTTGCTAATGAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTACATGTTCCGGGATGCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTCTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGCTCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E448419" ref_strand="+" ref_description="SGN-E448419 	[cSTS-2-N2]">
      <seq>ggcaattgaagagttttcagctgatgccacacgcttttctcttgctgatgcgggtgatgggatggacgatgctaacttcgtctttgaaacagctaatgctgctatcttacgtcttacaaaagaaatggcatggatgcaggaagtccttgatgcagagacatctttaagaactgggcctccatccacatatgctgaccacgtatttgctaatgaaataaatattgcagtaaggactacagagaagaactatagtgagtatatgttccgggatgctctgaaaactggtttttatgatcttcaggctgccagagatgagtataggctttcctgtggttcaggaggcatgaaccgggatttgctatggcgatttatggatgttcaaacacgacttattactcctatctgtccacactatgctgaatatgcctggagaaagcttttgaagaaggatggttatggcatcaaagctgggtggccagaggctgatttgccggatcttagccttaagaaggccaacaaatatttgcaagacacgattgtctcgatgaggaagctgcttcagaagcaagtttctggttcaaagaaaggaaatgccaatttgactagccaaaacaaaccttctganggcctgatatatgtggatgagcagtatagtggatggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="501" stop="1763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="801" g_stop="1463" g_length="663"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="663" r_length="663" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E448419" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="801" e_stop="1463"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAATTTTGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATAGCATGGATGCAGGAAGTCCTTGATGCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCGCGTATTTGCTAATGAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTACATGTTCCGGGATGCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTCTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGCTCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGTGGGCCTGGTATATGTGGATGAGCAGTATAGTGGATGGAA</genome_strand>
        <mrna_strand>GGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAACTTCGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATGGCATGGATGCAGGAAGTCCTTGATGCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCACGTATTTGCTAATGAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTATATGTTCCGGGATGCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTTTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTACTCCTATCTGTCCACACTATGCTGAATATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGGTGGCCAGAGGCTGATTTGCCGGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGANGGCCTGATATATGTGGATGAGCAGTATAGTGGATGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E270746" ref_strand="+" ref_description="SGN-E270746 	[cLEM-6-F4]">
      <seq>gaaaactggtttttatgatcttcatgctgccagagatgagtatgggctctccgggggttcaggaggcatgaaccgggatttgctatggcgatttatggatgttcaaacacgacttattgcgtcctatctgtccacactatgctgagtatgcctggagaaagcttttgaagaaggatggttatggcatcaaagctggctggccagaggctgatttgccagatcttacccttaagaaggccaacaaatatttgcaagacacgattgtctcgatgaggaagctgcttcaaaagcaagtttctcgttcaaagaaaggaaatgccaatttgactagccaaaacaaaccttctgtgggcctggtatatgtggatgagcagtatagtggatggaaaaaggaatgtttgggaatcctgcagaggaaattcgacacttcaactggctcctttgcacctgactaagaaatcctctccgaattgcagaatagtgagatcgggcaacaaggcaacttcaaacaaatacaaaaactgtgtatgccattcttgaggttcaagaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="777" stop="1928"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1077" g_stop="1628" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E270746" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1077" e_stop="1628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTCTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGC-TCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGTGGGCCTGGTATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAACTTCAAACAAATACAAAAGCTGTGTATGCCATTCTTGAGGTTCAAGAAAGA</genome_strand>
        <mrna_strand>GAAAACTGGTTTTTATGATCTTCATGCTGCCAGAGATGAGTATGGGCTCTCCGGGGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGCGTCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTACCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAAAAGCAAGTTTCTCGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGTGGGCCTGGTATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACTAAGAAATCCTCTCCGAATTGCAGAATAGTGAGATCGGGCAACAAGGCAACTTCAAACAAATACAAAAACTGTGTATGCCATTCTTGAGGTTCAAGAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E448528" ref_strand="+" ref_description="SGN-E448528 	[cSTS-3-O24]">
      <seq>cttttgaagaaggatggttatggcatcaaagctgggtggccagaggctgatttaccggatcttagccttaagaaggccaacaaatatttgcaagacacgattgtctcgatgaggaagctgcttcagaagcaagtttctggttcaaagaaaggaaatgccaatttgagtagccaaaacaaaccttctgtgggcctgatatatgtggatgagcagtatagtggatggaaaaaggagtgtttggggatcctgcagaggaaattcgacacttcaactggctcctttgcacctgacaaagaaatcctctccgaattgcagaagagtgagatcgggcaacaaggcaatttcaaacaaatacaaaagctttgtatgccgttcttgaggttcaagaaagacgaagtagtggctgttggggttcaagcattggacttgaagcttccttttggtgagattgaagtccttgagaagaactcggagttgatcaagagacagcttggtcttgagacattggagatcttatctatcacagatgatgctctagagagagcagggactcatgctgcagttgtgaagcagaatcctccctcaccaggaaatccaacagctatctttctctgagtaaatcatttttgccgcataagttatgtgatcagttcttgtttgagacctacatgatgtgatactctctttctagatcttttttgtccgtgcattctgcgtacattctattacttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="937" stop="2274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1237" g_stop="1974" g_length="738"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E448528" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1237" e_stop="1974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGTGGGCCTGGTATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAACTTCAAACAAATACAAAAGCTGTGTATGCCATTCTTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTTCCGTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGTCTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAGAGAGAGCAGGGCCTCATGCTGCAGTTGTGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGAGTAAATCATTTTTGCTGCATAAGTTTTGTGATGAACAAGTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTG</genome_strand>
        <mrna_strand>CTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGGTGGCCAGAGGCTGATTTACCGGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGAGTAGCCAAAACAAACCTTCTGTGGGCCTGATATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAGTGTTTGGGGATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAATTTCAAACAAATACAAAAGCTTTGTATGCCGTTCTTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTTCCTTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGTCTTGAGACATTGGAGATCTTATCTATCACAGATGATGCTCTAGAGAGAGCAGGGACTCATGCTGCAGTTGTGAAGCAGAATCCTCCCTCACCAGGAAATCCAACAGCTATCTTTCTCTGAGTAAATCATTTTTGCCGCATAAGTTATGTGAT---CAGTTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCGTACATTCTATTACTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E301451" ref_strand="+" ref_description="SGN-E301451 	[cLEX-8-A16]">
      <seq>caaagctggctggccagaggctgatttgccagatcttagccttaagaaggccaacaaatatttgcaagacacgattgtctcgatgaggaagctgcttcagaagcaagtttctggttcaaagaaaggaaatgccaatttgactagccaaaacaaaccttctgtgggcctggtatatgtggatgagcagtatagtggatggaaaaaggaatgtttgggaatcctgcagaggaaattcgacacttcaactggctcctttgcacctgacaaagaaatcctctccgaattgcagaagagtgagatcgggcaacaaggcaacttcaaacaaatacaaaagctgtgtatgccattcttgaggttcaagaaagacgaagtagtggctgttggggttcaagcattggacttgaagcttccgtttggtgagattgaagtccttgagaagaactcggagttgatcaagagacagcttggtcttgagacattggagatcttatctatgacagatgatgctctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="963" stop="2074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1263" g_stop="1774" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E301451" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1263" e_stop="1774"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGTGGGCCTGGTATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAACTTCAAACAAATACAAAAGCTGTGTATGCCATTCTTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTTCCGTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGTCTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAG</genome_strand>
        <mrna_strand>CAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGTGGGCCTGGTATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAACTTCAAACAAATACAAAAGCTGTGTATGCCATTCTTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTTCCGTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGTCTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E410021" ref_strand="+" ref_description="SGN-E410021 	[PPI-15-F18]">
      <seq>tgctcatccacatatatcagtatagtggatggaaaaaggaatgtttgggaatcctgcagaggaaattcgacacttcaactggctcctttgcacctgacaaagaaatcctctccgaattgcagaagagtgagatcgggcaacaaggcaatttcaaacaaatacaaaagctttgtatgccattcttgaggttcaagaaagacgaagtagtggctgttggggttcaagcattggacttgaagcttccttttggtgagattgaagtccttgagaagaactcggagttgatcaagagacagcttggtcttgagacattggagatcttatctatgacagatgatgctctagagagagcagggcctcatgctgcagttgtgaagcagaatcctccctcaccaggaaatccaactgctatctttctctgagtaaaccatttttgccgcataagttatgtgaacagtttcttgtttgagacctacatgatgtgacactctctttctagatcttttttgtccgtgcattctgcctacgttctattacttgctgaagatctangtccaaattagtggtttatttgcttcaatcttgatatggagcaactgcaattatatctccacattagtactcgttgagtagcaatttgacaattcgagcatctttgagtttttaccattctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="1142" stop="2394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1450" g_stop="2107" g_length="658"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="678" r_length="658" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="679" polyA_stop="690"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E410021" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E410021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1450" e_stop="2107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAACTTCAAACAAATACAAAAGCTGTGTATGCCATTCTTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTTCCGTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGTCTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAGAGAGAGCAGGGCCTCATGCTGCAGTTGTGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGAGTAAATCATTTTTGCTGCATAAGTTTTGTGATGAACAAGTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTGACATTCTAGGTCCAAATTAATGGTTTATTTGCTTCAATCTTGATATGGAGCAGCTGCAATCATATCTCCACAGTAGTACTCGTTGAGTAGGAATTTGACAATTTGAGCATCTTTGAG--TTTACCATTCTACAAG</genome_strand>
        <mrna_strand>TATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAATTTCAAACAAATACAAAAGCTTTGTATGCCATTCTTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTTCCTTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGTCTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAGAGAGAGCAGGGCCTCATGCTGCAGTTGTGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGAGTAAACCATTTTTGCCGCATAAGTTATGTGA--ACAGTTTCTTGTTTGAGACCTACATGATGTGACACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACGTTCTATTACTTGCTGAAGATCTANGTCCAAATTAGTGGTTTATTTGCTTCAATCTTGATATGGAGCAACTGCAATTATATCTCCACATTAGTACTCGTTGAGTAGCAATTTGACAATTCGAGCATCTTTGAGTTTTTACCATTCTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E281163" ref_strand="+" ref_description="SGN-E281163 	[cLER-7-B18]">
      <seq>tgaagcagaatcctccctcaccaggaaatccaactgctatctttctctgagtaaatcatttttgctgcataagttttgtgatgaacaagtcttgtttgagacctacatgatgtgatactctctttctagatcttttttgtccgtgcattctgcctacattctattacttgctgacattctaggtccaaattaatggtttatttgcttcaatcttgatatggagcagctgcaatcatatctccacagtagtactcgttgagtaggaatttgacaatttgagcatctttgagtttaccattctacaaggttttcctagttgtatcatcttttgatcatttctgcttatagcttgattgtcttttgatgctgtataagctgttcaagtatgactgttttttgttgagtaatttacgtaatttcataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="1502" stop="2524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1802" g_stop="2233" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E281163" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1802" e_stop="2233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGAGTAAATCATTTTTGCTGCATAAGTTTTGTGATGAACAAGTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTGACATTCTAGGTCCAAATTAATGGTTTATTTGCTTCAATCTTGATATGGAGCAGCTGCAATCATATCTCCACAGTAGTACTCGTTGAGTAGGAATTTGACAATTTGAGCATCTTTGAGTTTACCATTCTACAAGGTTTTCCTAGTTGTATCATCTTTTGATCATTTCTGCTTATAGCTTGATTGTCTTTTGATGCTGTATAAGCTGTTCAAGTATGACTGTTTTTTGTTGAGTAATTTACGTAATTTCATATTCTGAGGC</genome_strand>
        <mrna_strand>TGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGAGTAAATCATTTTTGCTGCATAAGTTTTGTGATGAACAAGTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTGACATTCTAGGTCCAAATTAATGGTTTATTTGCTTCAATCTTGATATGGAGCAGCTGCAATCATATCTCCACAGTAGTACTCGTTGAGTAGGAATTTGACAATTTGAGCATCTTTGAGTTTACCATTCTACAAGGTTTTCCTAGTTGTATCATCTTTTGATCATTTCTGCTTATAGCTTGATTGTCTTTTGATGCTGTATAAGCTGTTCAAGTATGACTGTTTTTTGTTGAGTAATTTACGTAATTTCATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E267402" ref_strand="-" ref_description="SGN-E267402 	[cLEI-8-M5]">
      <seq>aggaaatccaactgctatctttctctgagtaaatcatttttgctgcataagttttgtgatgaacaagtcttgtttgagacctacatgatgtgatactctctttctagatcttttttgtccgtgcattctgcctacattctattacttgctgacattctaggtccaaattaatggtttatttgcttcaatcttgatatggagcagctgcaatcatatctccacagtagtactcgttgagtaggaatttgacaatttgagcatctttgagtttaccattctacaaggttttcctagttgtatcatcttttgatcatttctgcttatagcttgattgtcttttgatgctgtataagctgttcaagtatgactgttttttgctgagtaatttacgtcatttcataaaaaaaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="1524" stop="2524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1824" g_stop="2223" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="401" polyA_stop="425"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E267402" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267402" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="1824" e_stop="2223"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAATCCAACTGCTATCTTTCTCTGAGTAAATCATTTTTGCTGCATAAGTTTTGTGATGAACAAGTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTGACATTCTAGGTCCAAATTAATGGTTTATTTGCTTCAATCTTGATATGGAGCAGCTGCAATCATATCTCCACAGTAGTACTCGTTGAGTAGGAATTTGACAATTTGAGCATCTTTGAGTTTACCATTCTACAAGGTTTTCCTAGTTGTATCATCTTTTGATCATTTCTGCTTATAGCTTGATTGTCTTTTGATGCTGTATAAGCTGTTCAAGTATGACTGTTTTTTGTTGAGTAATTTACGTAATTTCAT</genome_strand>
        <mrna_strand>AGGAAATCCAACTGCTATCTTTCTCTGAGTAAATCATTTTTGCTGCATAAGTTTTGTGATGAACAAGTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTGACATTCTAGGTCCAAATTAATGGTTTATTTGCTTCAATCTTGATATGGAGCAGCTGCAATCATATCTCCACAGTAGTACTCGTTGAGTAGGAATTTGACAATTTGAGCATCTTTGAGTTTACCATTCTACAAGGTTTTCCTAGTTGTATCATCTTTTGATCATTTCTGCTTATAGCTTGATTGTCTTTTGATGCTGTATAAGCTGTTCAAGTATGACTGTTTTTTGCTGAGTAATTTACGTCATTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E597213" ref_strand="+" ref_description="SGN-E597213 	[40712]">
      <seq>cctacatgatgtgatactctctttctagatctttttttgtccgtgcattctgcgtacattctattacttgctgaagttctaggtccaaattagtggtttatttgcttcaatcttgatacggagcaactgcaattatatctccacattagtactcgttgagtagcaatttgacaattcgaacatctttgagtttaccattctaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="1603" stop="2406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1903" g_stop="2107" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E597213" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>205</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E597213" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1903" e_stop="2107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTACATGATGTGATACTCTCTTTCTAGATCTTTT-TTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTGACATTCTAGGTCCAAATTAATGGTTTATTTGCTTCAATCTTGATATGGAGCAGCTGCAATCATATCTCCACAGTAGTACTCGTTGAGTAGGAATTTGACAATTTGAGCATCTTTGAGTTTACCATTCTACAAG</genome_strand>
        <mrna_strand>CCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTTGTCCGTGCATTCTGCGTACATTCTATTACTTGCTGAAGTTCTAGGTCCAAATTAGTGGTTTATTTGCTTCAATCTTGATACGGAGCAACTGCAATTATATCTCCACATTAGTACTCGTTGAGTAGCAATTTGACAATTCGAACATCTTTGAGTTTACCATTCTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E338242" ref_strand="+" ref_description="SGN-E338242 	[cTOE-13-M11]">
      <seq>taatattttctttcttttagaattttagtaagttcttttataacacgttatcagcacgagtctctagctaattgagagtgagttttagttttttctttaactcatgttttggttgatctcgatatgagaatcaaggtattatttgcataagatcaggtatgtattttctaaaatattttatgatttagaataaaatagtattcagtcactagcaattatcaggaaccgaagacatatactactattggttgaatatgacatgctatataaaacttattaaatggaagaaggtataaaattttaatagcatgagtttgaatgttattttgattgttttgaaagactcaaagggtgagtcgtgttgtacttcggtctattataccgttggtcaagggtaagacgattgattcaagtttcatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="17332" stop="18318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17632" g_stop="18018" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="421" r_length="386" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E338242" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17632" e_stop="18018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATAACACATTATCAACACGAGTCTCTAGCCAATTAAGATTGTGTTTTAGTTTTTTCTTTAACACATGTTTTGGTTGATCTCGTTATGAGAATCAAGGTATTATATGCATAAAATCAGGTATGTATATACTAAAATATTTTTATGATTTAGAATATTATAGTATTCAATCACTAACAATTATCAGGAACCAAAGGCATATACTACTATTGGTTGAATATGACATGCTATACAAAACTTCTTAAATGGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATATTATTTTGATTGTTTTGAAAGTCTCAAAGAATAAATCATGTTGTACTTCGGTTTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCG</genome_strand>
        <mrna_strand>TTTTATAACACGTTATCAGCACGAGTCTCTAGCTAATTGAGAGTGAGTTTTAGTTTTTTCTTTAACTCATGTTTTGGTTGATCTCGATATGAGAATCAAGGTATTATTTGCATAAGATCAGGTATGTATTTTCTAAAATA-TTTTATGATTTAGAATAAAATAGTATTCAGTCACTAGCAATTATCAGGAACCGAAGACATATACTACTATTGGTTGAATATGACATGCTATATAAAACTTATTAAATGGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATGTTATTTTGATTGTTTTGAAAGACTCAAAGGGTGAGTCGTGTTGTACTTCGGTCTATTATACCGTTGGTCAAGGGTAAGACGATTGATTCAAGTTTCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E354965" ref_strand="+" ref_description="SGN-E354965 	[cTOS-19-M24]">
      <seq>gataagacgatagattcaagttctatctcaccaaaagggtaagacatcaattagagttttgatacaccgtgattgggttcaagttccatagaattatggcgtaacacgccttacatgggtaagacattgagtttgatccaatgcataaaatgatgactaagaaaaataatatatttttgatgaaatgtctttaaattcatcatattgaatttgctccatttcttgaaaagaatatggtagcaacatgtgataactctgaaatccacctgttgacttgctccattcaatcatatgaatgtggtagcagtgaatgattagtttgaaagatgacaaataattaatgatatagaataagggagtggagggaaagaattataatagtcatcattgtggtaatgataaaaggaagaacactatgagttcttcaaatagtccttcaaaatgtgaaggcaacttttattatcaaaatggtatgaaaggttattagacttgtcaatgttgtcaaccccataatttgacaagtttataaatcctctatcatgacacaagaagataaagtgatggtacacttcatctttcaaagtgatgttgaggtgtgtcatggaaatatgatgaattttaaagccatgacaatgtgcttataatgcaaatttatgaagtacatataaataattagttcattccttgaagagaatgtgacttgtgatgagtatcgtgaatgctcgaccattctataaaagaatgggtccaaatgtgataaaatcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="17779" stop="19156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18079" g_stop="18856" g_length="778"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="767" r_length="767" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E354965" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354965" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18079" e_stop="18856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAGACGATAGATTCAAGTACTATTGCACCAAAAGGGTAAGACATCAATTAGAGTTTTGATGCACCGTGATTGGGTTCAAGTCTCATAGAATTATGGCGTAACACGCCTTATATGGGTAAGACATTGAGTTTGAGCCAATGCACCATAGTGATGATAAAATGATGACTAAGAAAAATAATATATTTTTGATGAAATGTCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTGAAAAGAATGTGGTAGAAACATGTGATAACTCTGAAATCCACCTGTTGACTTGCTCCATTCAATCATATGAATGTGGTAGCAGCGAATGATTAGTCGGAAAGATGAAAAAAAATTAATAATAT-GAATAAGAGTGTGGAGGGACAAAATTATAATAGTTATCATTGTGGTAATGATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGAGAAGACAATTTTTATTAGCAAAATGGTATGAAAGGTCATTAGACTTGTGAATGTTGTCAACCCAATAATTTGACAAGTTTATAAATCCTCTATCATGATACAAGAAGATAAAGTGATGGTACACTTGATCTTTCAAAGTGATGTTGAGGTGTGTTATAGAAATATGATGAATTTTAAAGCCATGACAATGTGCTTATAATGCAAATTTATGAAGTACATATAACTAATTAGTCCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATT</genome_strand>
        <mrna_strand>GATAAGACGATAGATTCAAGTTCTATCTCACCAAAAGGGTAAGACATCAATTAGAGTTTTGATACACCGTGATTGGGTTCAAGTTCCATAGAATTATGGCGTAACACGCCTTACATGGGTAAGACATTGAGTTTGATCCAATG---C------AT---AAAATGATGACTAAGAAAAATAATATATTTTTGATGAAATGTCTTTAAATTCATCATATTGAATTTGCTCCATTTCTTGAAAAGAATATGGTAGCAACATGTGATAACTCTGAAATCCACCTGTTGACTTGCTCCATTCAATCATATGAATGTGGTAGCAGTGAATGATTAGTTTGAAAGATGACAAATAATTAATGATATAGAATAAGGGAGTGGAGGGAAAGAATTATAATAGTCATCATTGTGGTAATGATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGTGAAGGCAACTTTTATTATCAAAATGGTATGAAAGGTTATTAGACTTGTCAATGTTGTCAACCCCATAATTTGACAAGTTTATAAATCCTCTATCATGACACAAGAAGATAAAGTGATGGTACACTTCATCTTTCAAAGTGATGTTGAGGTGTGTCATGGAAATATGATGAATTTTAAAGCCATGACAATGTGCTTATAATGCAAATTTATGAAGTACATATAAATAATTAGTTCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAAAGAATGGGTCCAAATGTGATAAAATCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E542836" ref_strand="+" ref_description="SGN-E542836 	[TUS-64-F12]">
      <seq>ttttttttttttcaaaccttctatagaggtgagttgtgacatatatccaacccataatgattttatcacatctggacccattctcttatagaatggtcgagcattcacgatactcattacaagtcacattctcttcaaagattggactaattattcatatgtactttataaatttgcattataagcacattgtcatgactttaaaattcatcatatttccatgacacacctcaacatcactttgaaagataaagtgtaccatcactttatcttcttatatcatgatagaggatttataaacttgtcaagttattgggttgacaacattcacaagtctaatgacttttcataccattttcataataaaaattgtcttcacattttgaaggactatttgaagaactcatattgttattccttttatcattaccacaatgatgactattataattctgtccttccacgcctttattcatatcattaattatttgtcatctttcagactaatcattcactgctaccacattcatatgattgaatggagcaagtcaacaggcggatttcagagttatcacatgttgctaccacattcttttcaaggaatggagcaaattcaatatgatgaattttcagacattttcatcaaaaatataatgattttcttagtcatcatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="19210" stop="17937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18911" g_stop="18237" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="676" r_length="676" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E542836" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18911" e_stop="18237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTTTTTCTCAAACCTTCCATAGAGGTGAGTTGTGGCATATATCCAACCCATAATGATTTTATCACATCTGGACCCATTCTCTTATAGAATGGTCGAGCATTCACGATACTCATCACAAGTCACATTCTCTTCAAGGAATGGACTAATTAGTTATATGTACTTCATAAATTTGCATTATAAGCACATTGTCATGGCTTTAAAATTCATCATATTTCTATAACACACCTCAACATCACTTTGAAAGATCAAGTGTACCATCACTTTATCTTCTTGTATCATGATAGAGGATTTATAAACTTGTCAAATTATTGGGTTGACAACATTCACAAGTCTAATGACCTTTCATACCATTTTGCTAATAAAAATTGTCTTCTCATTTTGAAGGACTATTTGAAGAACTCATAGTGTTCTTCCTTTTATCATTACCACAATGATAACTATTATAATTTTGTCCCTCCACACTCTTATTCATATTATTAATTTTTTTTCATCTTTCCGACTAATCATTCGCTGCTACCACATTCATATGATTGAATGGAGCAAGTCAACAGGTGGATTTCAGAGTTATCACATGTTTCTACCACATTCTTTTCAAGGAATGGAGCAAATTCAATATGATGAATTTCAAGACA-TTTCATCAAAAATATATTATTTTTCTTAGTCATCATTTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTCAAACCTTCTATAGAGGTGAGTTGTGACATATATCCAACCCATAATGATTTTATCACATCTGGACCCATTCTCTTATAGAATGGTCGAGCATTCACGATACTCATTACAAGTCACATTCTCTTCAAAGATTGGACTAATTATTCATATGTACTTTATAAATTTGCATTATAAGCACATTGTCATGACTTTAAAATTCATCATATTTCCATGACACACCTCAACATCACTTTGAAAGATAAAGTGTACCATCACTTTATCTTCTTATATCATGATAGAGGATTTATAAACTTGTCAAGTTATTGGGTTGACAACATTCACAAGTCTAATGACTTTTCATACCATTTTCATAATAAAAATTGTCTTCACATTTTGAAGGACTATTTGAAGAACTCATATTGTTATTCCTTTTATCATTACCACAATGATGACTATTATAATTCTGTCCTTCCACGCCTTTATTCATATCATTAATTATTTGTCATCTTTCAGACTAATCATTCACTGCTACCACATTCATATGATTGAATGGAGCAAGTCAACAGGCGGATTTCAGAGTTATCACATGTTGCTACCACATTCTTTTCAAGGAATGGAGCAAATTCAATATGATGAATTTTCAGACATTTTCATCAAAAATATAATGATTTTCTTAGTCATCATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E204533" ref_strand="+" ref_description="SGN-E204533 	[cLEC-24-G13]">
      <seq>gagaactagtccgagttttttttttttttttttcaaaaccttctatagaggtgagttgtgacatatatccaacccataatgattttatcacatctggacccattctcttatagaatggtcgagcattcacgatactcattacaagtcacattctcttcaaagattggactaattattcatatgtactttataaatttgcattataagcacattgtcatgactttaaaattcatcatatttccatgacacacctcaacatcactttgaaagataaagtgtaccatcactttatcttcttatatcatgatagaggatttataaacttgtcaagttattgggttgacaacattcacaagtctaatgacttttcataccattttcataataaaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="19217" stop="18241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18910" g_stop="18541" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="393" r_length="369" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E204533" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>370</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18910" e_stop="18541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTTCTCAAACCTTCCATAGAGGTGAGTTGTGGCATATATCCAACCCATAATGATTTTATCACATCTGGACCCATTCTCTTATAGAATGGTCGAGCATTCACGATACTCATCACAAGTCACATTCTCTTCAAGGAATGGACTAATTAGTTATATGTACTTCATAAATTTGCATTATAAGCACATTGTCATGGCTTTAAAATTCATCATATTTCTATAACACACCTCAACATCACTTTGAAAGATCAAGTGTACCATCACTTTATCTTCTTGTATCATGATAGAGGATTTATAAACTTGTCAAATTATTGGGTTGACAACATTCACAAGTCTAATGACCTTTCATACCATTTTGCTAATAAAAATT</genome_strand>
        <mrna_strand>TTTTTTTTTC-AAAACCTTCTATAGAGGTGAGTTGTGACATATATCCAACCCATAATGATTTTATCACATCTGGACCCATTCTCTTATAGAATGGTCGAGCATTCACGATACTCATTACAAGTCACATTCTCTTCAAAGATTGGACTAATTATTCATATGTACTTTATAAATTTGCATTATAAGCACATTGTCATGACTTTAAAATTCATCATATTTCCATGACACACCTCAACATCACTTTGAAAGATAAAGTGTACCATCACTTTATCTTCTTATATCATGATAGAGGATTTATAAACTTGTCAAGTTATTGGGTTGACAACATTCACAAGTCTAATGACTTTTCATACCATTTTCATAATAAAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E273497" ref_strand="+" ref_description="SGN-E273497 	[cLEN-3-J16]">
      <seq>ttcagacacctggattgtttcaaggattttcatataaccttcattacaatttttcattacatgcattcaagtttttcatatgttgccagatcaaaacaaacctcattgcatccaccaaaggagaaaacatctccaataatgtcaggatttttgcgataaacctttatgccccaaggcacaaaccgtatttgatatcttacggttatactatcacataataatttatttgtaccccactgacattataccttgatttatggactaccagtccaaaatgtcacttttctaagtgaaacaaaatatacttgaattgtgcattttacttggctaaccatttatctgttcacactatatgacagatttgaattcaagatcctcatcacaatttatatcattgagcgctacctcatatcaaagataccgtcgacggttatttgatatcgattccaacaagacataacttatcgagatctcttcaatttttttcattatttcaggtacctgaacctttttcaagattttatgaagtgttatgtcaatgtgctcctttatagcacttgcctcattatcatgaccatattgatcatttgctccttccttctttaaggaattttatatttggaatcaattggtctattacgctttcggcgtatcataaactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="21332" stop="20056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21032" g_stop="20356" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E273497" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.020" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21032" e_stop="20356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACACCTCGATTGTTTCAAGGATTTTCATATAACCTTTATTGTCTAGCTAGACATTACAATTATTTATTATATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCTAATAATGTCAGGATTTTTGCGATAAATCTTTATGCCCCAAGGCACAAAACATATTTGATATCTTACGGTTATACTATCGCATTATAATTTATTTGTACCCCACTGACATTATACCTTTATTTATGGACTATCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCCAACCATTTATCTGTCCACACTATATGACAGATTTGAATTCAAGATCCTCGTCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACCATCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTATTCGAGATCTCTTC-A--TATTTCATTATTTCATGTACATGAACCTTTTTCAAGAATTTATGAAGTGTTATGTCAATATGCTCATTTATAGCACTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTTAAGGAAATTTATATTTGGAATCGAATGGTCTATAACGTTTTCGGTGTGTCATAGACTCTG</genome_strand>
        <mrna_strand>TTCAGACACCTGGATTGTTTCAAGGATTTTCATATAA-C--------CT---T---CATTACAATTTTTCATTACATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAACCGTATTTGATATCTTACGGTTATACTATCACATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCTAACCATTTATCTGTTCACACTATATGACAGATTTGAATTCAAGATCCTCATCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACCGTCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTA-TCGAGATCTCTTCAATTTTTTTCATTATTTCAGGTACCTGAACCTTTTTCAAGATTTTATGAAGTGTTATGTCAATGTGCTCCTTTATAGCACTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTTAAGGAATTTTATATTTGGAATCAATTGGTCTATTACGCTTTCGGCGTATCATAAACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E273387" ref_strand="+" ref_description="SGN-E273387 	[cLEN-3-J20]">
      <seq>ttcagacacctggattgtttcaaggattttcatataaccttcattacaatttttcattacatgcattcaagtttttcatatgttgccagatcaaaacaaacctcattgcatccaccaaaggagaaaacatctccaataatgtcaggatttttgcgataaacctttatgccccaaggcacaaaccgtatttgatatcttacggttatactatcacataataatttatttgtaccccactgacattataccttgatttatggactaccagtccaaaatgtcacttttctaagtgaaacaaaatatacttgaattgtgcattttacttggctaaccatttatctgttcacactatatgacagatttgaattcaagatcctcatcacaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="21332" stop="20330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21032" g_stop="20630" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E273387" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.039" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21032" e_stop="20630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACACCTCGATTGTTTCAAGGATTTTCATATAACCTTTATTGTCTAGCTAGACATTACAATTATTTATTATATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCTAATAATGTCAGGATTTTTGCGATAAATCTTTATGCCCCAAGGCACAAAACATATTTGATATCTTACGGTTATACTATCGCATTATAATTTATTTGTACCCCACTGACATTATACCTTTATTTATGGACTATCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCCAACCATTTATCTGTCCACACTATATGACAGATTTGAATTCAAGATCCTCGTCACAATTT</genome_strand>
        <mrna_strand>TTCAGACACCTGGATTGTTTCAAGGATTTTCATATAA-C--------CT---T---CATTACAATTTTTCATTACATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCCAATAATGTCAGGATTTTTGCGATAAACCTTTATGCCCCAAGGCACAAACCGTATTTGATATCTTACGGTTATACTATCACATAATAATTTATTTGTACCCCACTGACATTATACCTTGATTTATGGACTACCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCTAACCATTTATCTGTTCACACTATATGACAGATTTGAATTCAAGATCCTCATCACAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E391540" ref_strand="+" ref_description="SGN-E391540 	[TUS-16-I1]">
      <seq>acgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtggatatatcgcattcattgagtaccccaatgattatgagatcacttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="20338" stop="21615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20638" g_stop="21315" g_length="678"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="677" r_length="677" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E391540" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20638" e_stop="21315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGATAGTCCATAAATAAAGGTATAATGTCAGTGGGGTACAAATAAATTATAATGCGATAGTATAACCGTAAGATATCAAATATGTTTTGTGCCTTGGGGCATAAAGATTTATCGCAAAAATCCTGACATTATTAGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAACTTGAATGCATATAATAAATAATTGTAATGTCTAGCTAGACAATAAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTGAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGGCCCTAATTGTCCTTGTATTTTTATGAAAAAATCTTGGTAAGGCAAAATTTTATCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTTTAACAGTGCACATACACTGAAAAGTTTTGATGCAATTTTATATGGATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGAC</genome_strand>
        <mrna_strand>ACGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGATATATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E205808" ref_strand="+" ref_description="SGN-E205808 	[cLEC-20-M21]">
      <seq>cgaggatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="20339" stop="21493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20639" g_stop="21193" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E205808" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205808" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20639" e_stop="21193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGATAGTCCATAAATAAAGGTATAATGTCAGTGGGGTACAAATAAATTATAATGCGATAGTATAACCGTAAGATATCAAATATGTTTTGTGCCTTGGGGCATAAAGATTTATCGCAAAAATCCTGACATTATTAGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAACTTGAATGCATATAATAAATAATTGTAATGTCTAGCTAGACAATAAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTGAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGGCCCTAATTGTCCTTGTATTTTTATGAAAAAATCTTGGTAAGGCAAAATTTTATCTTGACCTACAG</genome_strand>
        <mrna_strand>CGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E202657" ref_strand="+" ref_description="SGN-E202657 	[cLEC-19-H1]">
      <seq>gatcttgaattcaaatctgtcatatagtgtggacagattaatggttgaccaagtaaaatgcacaattcaagtatattttgtttcacttaaaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacgggttgcttcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgatttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="20343" stop="21396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20643" g_stop="21096" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E202657" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202657" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20643" e_stop="21096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGATAGTCCATAAATAAAGGTATAATGTCAGTGGGGTACAAATAAATTATAATGCGATAGTATAACCGTAAGATATCAAATATGTTTTGTGCCTTGGGGCATAAAGATTTATCGCAAAAATCCTGACATTATTAGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAACTTGAATGCATATAATAAATAATTGTAATGTCTAGCTAGACAATAAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTGAAGAATCCTTATATGGATTGAAAT</genome_strand>
        <mrna_strand>GATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATTAATGGTTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAAAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGGTTGCTTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGATTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E267707" ref_strand="+" ref_description="SGN-E267707 	[cLEI-12-K2]">
      <seq>ttgaccaagtaaaatgcacaattcaagtatattttgtttcacttagaaaagtgacattttggactggtagtccataaatcaaggtataatgtcagtggggtacaaataaattattatgcaataatataaccgtaagatatcaaatacggtttgtgtcttggggcataaaggtttatcgcaaaaatcctgacattattggagatgttttctcctttggtggatgcaatgaggtttgttttgatctggcaacatatgaaaagcttgaatgcatgtaatgaataattgtaatgtctagctagacaatgaaggttatatgaaaatccttgaaacaatcgaggtgtctgaagcatacaagagtttgaaagaaactttttcaataaagcttcaagaatccttatatggattgaaatagtcaaggaagaaaagggtacaaaagaatgatcctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgtcttgacctacagattgttaatttgacaaataaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatgtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="20387" stop="21569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20687" g_stop="21269" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E267707" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20687" e_stop="21269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGATAGTCCATAAATAAAGGTATAATGTCAGTGGGGTACAAATAAATTATAATGCGATAGTATAACCGTAAGATATCAAATATGTTTTGTGCCTTGGGGCATAAAGATTTATCGCAAAAATCCTGACATTATTAGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAACTTGAATGCATATAATAAATAATTGTAATGTCTAGCTAGACAATAAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTGAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGGCCCTAATTGTCCTTGTATTTTTATGAAAAAATCTTGGTAAGGCAAAATTTTATCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTTTAACAGTGCACATACACTGAAAAGTTTTGATGCAATTTTATATGGA</genome_strand>
        <mrna_strand>TTGACCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGGTAGTCCATAAATCAAGGTATAATGTCAGTGGGGTACAAATAAATTATTATGCAATAATATAACCGTAAGATATCAAATACGGTTTGTGTCTTGGGGCATAAAGGTTTATCGCAAAAATCCTGACATTATTGGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAGCTTGAATGCATGTAATGAATAATTGTAATGTCTAGCTAGACAATGAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATACAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTCAAGAATCCTTATATGGATTGAAATAGTCAAGGAAG-AAAAGGGTACAAAAGAATGATCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGTCTTGACCTACAGATTGTTAATTTGACAAATAAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E289962" ref_strand="+" ref_description="SGN-E289962 	[cLET-9-B10]">
      <seq>ttgaaagaaacttatccaataaagcttcaagaattcttatatggattgaaatagtcaaggaagaaaaatggtacaaaagaatgaccctaattgtccttgtatttttatgaaaaggtcttggtaagacaaaattttgccttgacctacagattgataatttgacaaatgaaatatttgtctaacagtgcacatacactgaaaaattttgatgcaattttatatgaataaatcgcattcattgagtaccccaatgattatgagattacttgacataaatgatgattcagtttgatctcaaaagaaggatgatgagtttcttggtgatgaaactctatcttggtgcaatcagggcactagtgcatcttactaacaatattattccagatatttgttttgcagtaaatttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="20745" stop="21753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21045" g_stop="21453" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="409" r_length="409" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E289962" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21045" e_stop="21453"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAAGAAACTTTTTCAATAAAGCTTGAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGGCCCTAATTGTCCTTGTATTTTTATGAAAAAATCTTGGTAAGGCAAAATTTTATCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTTTAACAGTGCACATACACTGAAAAGTTTTGATGCAATTTTATATGGATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAATTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGCGCAATTAGGGCACTAGTGCATCTTACTAACAATATTTGACCAGATATTTGTTTTGCAGTAAATTTACT</genome_strand>
        <mrna_strand>TTGAAAGAAACTTATCCAATAAAGCTTCAAGAATTCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGACCCTAATTGTCCTTGTATTTTTATGAAAAGGTCTTGGTAAGACAAAATTTTGCCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTCTAACAGTGCACATACACTGAAAAATTTTGATGCAATTTTATATGAATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATTACTTGACATAAATGATGATTCAGTTTGATCTCAAAAGAAGGATGATGAGTTTCTTGGTGATGAAACTCTATCTTGGTGCAATCAGGGCACTAGTGCATCTTACTAACAATATTATTCCAGATATTTGTTTTGCAGTAAATTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E313822" ref_strand="+" ref_description="SGN-E313822 	[cTOA-17-C2]">
      <seq>atgctttctaagctactgctgcccatcggcagtcatggtaaacaagttccgcaggcaaattgaggattccaaaaggatttgccagcagatattgcaagaacatattaaacccggtgtatcttgaggttcccaatggagaagtatgggaggttgaactggaacattctgaaggccacatttggctagctgaaggctggaaggatttcagcgactattactcaataagacgcgggaacttttttatgttcggatacaatgctcgttctcattttaatgtcactatatttgattttagtgcagcagaaattgaatatccaccagcagagattgagtcggatgattctatagatatatcggatgtggttgagtattcttctgaatatctgagccatgaccccttagtgaaggagagaaaaagaataagacaagaaagggaagaagagaatgatattccagttgaacgtcaaactattgtaattgatgaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="57574" stop="59423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57874" g_stop="57935" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57936" i_stop="58698" i_length="763">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58699" g_stop="59123" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="487" r_length="425" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E313822" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57874" e_stop="57935"/>
          <exon e_start="58699" e_stop="59123"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCTTTCTAAGCTACTGCTGCCCATCGGCAGTCATGGTAAACAAGTTCCGCAGGCAAATTGGTAAAGTCTCTTCCATTTCTTACACTTCTCAACCCAAATTCTGCAAGATCATTTTTAGCCCGCATGAATTATGCCGTCTCGTAAGTACTTTCTTCCCCATTTTCCTTCTTTAATTTCTCCTGGATTCCCAATTTTATCTTACTGTAAATCTACTTTCCCTCCTCGTTAATTGTGCATTTGAATCGAACGATTTGTAATCTAGTTCAATGAAAATTTCTCAATAAAATTCGCATAACACCCTTTACCTTGGTAATAAACTGACATTTTATGTCCTCCAACTTTGAATGTTCAAATACACTTAAACTTAAACTTGTATAAAGTCGAACAAGTGTTGTATAAAGTCGAACAAGTAATATAGGCTTCTTACGTGATATAATATACATAGGATGTTGTGTAGGATAGACATTGTCATGTAGGTCGAGTGTGTCTACTCGTGTACATTCAAAGTGTCCTAGGTAGGATAGACGTTGTCATGTAGATCGAGTGTGTCTGCTCGTGTACATTCAAAGTTGAATGATATAAATGTCAAATTAGGTCAAGTTGAAGGACATAGTGTATTATGCCAATAAAATTTGGATGCTCGGAAGTAAGAAATGAATCTTTGCCCTTATTCAATAGAAGAAGCTAGCTAATGAGCTAAGACCTATAGCTCATTGTCTCAATCAATGTAGGACAAGTTAACATAGGTCGAATAACAATGCTGTGAGTGAAGGTGTCTATTGCGAATTATGTGTGGAACTGAATTCATATTTTTTGAACACAGAGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATATTAAACCCGGTGTATCTTGAGGTTCCCAATGGAGAAGTATGGGAGGTTGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATTACTCAATAAGACGCGGGAACTTTTTTATGTTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGA</genome_strand>
        <mrna_strand>ATGCTTTCTAAGCTACTGCTGCCCATCGGCAGTCATGGTAAACAAGTTCCGCAGGCAAATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATATTAAACCCGGTGTATCTTGAGGTTCCCAATGGAGAAGTATGGGAGGTTGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATTACTCAATAAGACGCGGGAACTTTTTTATGTTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAGAGAAAAAGAATAAGACAAGAAAGGGAAGAAGAGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E313823" ref_strand="+" ref_description="SGN-E313823 	[cTOA-17-C6]">
      <seq>ctgcccatcggcagtcatggtaaacaagttccgcaggcaaattgaggattccaaaaggatttgccagcagatattgcaagaacatattaaacccggtgtatcttgaggttcccaatggagaagtatgggaggatgaactggaacattctgaaggccacatttggctagctgaaggctggaaggatttcagcgactatgactcaataagacgcgggaacttttttatgttccgatacaatgctcgttctcattttaatgtcactatatttgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="57592" stop="59228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57892" g_stop="57935" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57936" i_stop="58698" i_length="763">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58699" g_stop="58928" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="274" r_length="230" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E313823" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57892" e_stop="57935"/>
          <exon e_start="58699" e_stop="58928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCCATCGGCAGTCATGGTAAACAAGTTCCGCAGGCAAATTGGTAAAGTCTCTTCCATTTCTTACACTTCTCAACCCAAATTCTGCAAGATCATTTTTAGCCCGCATGAATTATGCCGTCTCGTAAGTACTTTCTTCCCCATTTTCCTTCTTTAATTTCTCCTGGATTCCCAATTTTATCTTACTGTAAATCTACTTTCCCTCCTCGTTAATTGTGCATTTGAATCGAACGATTTGTAATCTAGTTCAATGAAAATTTCTCAATAAAATTCGCATAACACCCTTTACCTTGGTAATAAACTGACATTTTATGTCCTCCAACTTTGAATGTTCAAATACACTTAAACTTAAACTTGTATAAAGTCGAACAAGTGTTGTATAAAGTCGAACAAGTAATATAGGCTTCTTACGTGATATAATATACATAGGATGTTGTGTAGGATAGACATTGTCATGTAGGTCGAGTGTGTCTACTCGTGTACATTCAAAGTGTCCTAGGTAGGATAGACGTTGTCATGTAGATCGAGTGTGTCTGCTCGTGTACATTCAAAGTTGAATGATATAAATGTCAAATTAGGTCAAGTTGAAGGACATAGTGTATTATGCCAATAAAATTTGGATGCTCGGAAGTAAGAAATGAATCTTTGCCCTTATTCAATAGAAGAAGCTAGCTAATGAGCTAAGACCTATAGCTCATTGTCTCAATCAATGTAGGACAAGTTAACATAGGTCGAATAACAATGCTGTGAGTGAAGGTGTCTATTGCGAATTATGTGTGGAACTGAATTCATATTTTTTGAACACAGAGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATATTAAACCCGGTGTATCTTGAGGTTCCCAATGGAGAAGTATGGGAGGTTGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATTACTCAATAAGACGCGGGAACTTTTTTATGTTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTT</genome_strand>
        <mrna_strand>CTGCCCATCGGCAGTCATGGTAAACAAGTTCCGCAGGCAAATTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATATTAAACCCGGTGTATCTTGAGGTTCCCAATGGAGAAGTATGGGAGGATGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATGACTCAATAAGACGCGGGAACTTTTTTATGTTCCGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E592323" ref_strand="+" ref_description="SGN-E592323 	[46054]">
      <seq>gttccgcaagcaaattggtgaagtctcttccatctctaacatttctcaacccaaattctgcaagatcatttttagcccacatgaattatgccgtctcaggattccaaaaggatttgccagcagatattgcaagaacatcttaaaccctgtgtatcttgaggttcccagtggagaagtatgggaggttgaactggaacattctgaaggccacatttggctagctgaaggctggaaggatttcagcgactattactcaataagacgcgggaacttttttatgttcggatacaatgctcattctcattttaatgtcactatatttgattttagtgcagcagaaattgaatatccaccagcagagattgagtcggatgattctatagatatttcggatgtggttgagcattcttccgaatatctgagctatgaccccgtagtgcaggagagaaaaagaataagacaagaaggggaagaagaggatgatattccagttgaacatcaaactaacgtaatcgatgaagaagagtttcaaaggaatgtagtttcactagtaataagtgaagattgcgaggagcacgaacaacaatccaacattgttaccagtaagagaaaggcagagagggatgaagggatagctgataactatcaaagagcaaaagcttttaaatctaagaatccattcattgtatcttttatgcatccatcgtatgtctcgagaccacacgctctgtacattccgttgaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="57619" stop="59843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57919" g_stop="58015" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58016" i_stop="58698" i_length="683">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.961" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58699" g_stop="59152" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="551" r_length="454" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59153" i_stop="59257" i_length="105">
            <donor d_prob="0.986" d_score="0.88"/>
            <acceptor a_prob="0.608" a_score="0.70"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59258" g_stop="59430" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="730" r_length="179" r_score="0.908"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59431" i_stop="59526" i_length="96">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59527" g_stop="59543" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="747" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E592323" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E592323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57919" e_stop="58015"/>
          <exon e_start="58699" e_stop="59152"/>
          <exon e_start="59258" e_stop="59430"/>
          <exon e_start="59527" e_stop="59543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCGCAGGCAAATTGGTAAAGTCTCTTCCATTTCTTACACTTCTCAACCCAAATTCTGCAAGATCATTTTTAGCCCGCATGAATTATGCCGTCTCGTAAGTACTTTCTTCCCCATTTTCCTTCTTTAATTTCTCCTGGATTCCCAATTTTATCTTACTGTAAATCTACTTTCCCTCCTCGTTAATTGTGCATTTGAATCGAACGATTTGTAATCTAGTTCAATGAAAATTTCTCAATAAAATTCGCATAACACCCTTTACCTTGGTAATAAACTGACATTTTATGTCCTCCAACTTTGAATGTTCAAATACACTTAAACTTAAACTTGTATAAAGTCGAACAAGTGTTGTATAAAGTCGAACAAGTAATATAGGCTTCTTACGTGATATAATATACATAGGATGTTGTGTAGGATAGACATTGTCATGTAGGTCGAGTGTGTCTACTCGTGTACATTCAAAGTGTCCTAGGTAGGATAGACGTTGTCATGTAGATCGAGTGTGTCTGCTCGTGTACATTCAAAGTTGAATGATATAAATGTCAAATTAGGTCAAGTTGAAGGACATAGTGTATTATGCCAATAAAATTTGGATGCTCGGAAGTAAGAAATGAATCTTTGCCCTTATTCAATAGAAGAAGCTAGCTAATGAGCTAAGACCTATAGCTCATTGTCTCAATCAATGTAGGACAAGTTAACATAGGTCGAATAACAATGCTGTGAGTGAAGGTGTCTATTGCGAATTATGTGTGGAACTGAATTCATATTTTTTGAACACAGAGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATATTAAACCCGGTGTATCTTGAGGTTCCCAATGGAGAAGTATGGGAGGTTGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATTACTCAATAAGACGCGGGAACTTTTTTATGTTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGAAGAGTCTCAACTGAATGTAGTTTCACTAGGTAAGAAAACTTCTTATCTGGTTTATTAGCTATGAACAGAATGAAATCAGTCGTCTTACATTATAATTTAATAGTAATACATTGTTTTTGGATATCTATTTCAAGTAATAAGTGAAGATTGTGA-G-G-A-G--CAACAATCCAACATTGTTACCAGTAAGAGAAAGGAAGAGAGGGATGAAGGGACAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAAACCACACGCTCTGGTAAGCTATGAAACTTTGTAGAATGCCTGATACCCGACCCCTTTTAATTCATATGCACATCCTTCAACTCAATTTATGATTTACCTCTTTTGGCAGTACATTCCGTTGAAATT</genome_strand>
        <mrna_strand>GTTCCGCAAGCAAATTGGTGAAGTCTCTTCCATCTCTAACATTTCTCAACCCAAATTCTGCAAGATCATTTTTAGCCCACATGAATTATGCCGTCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATCTTAAACCCTGTGTATCTTGAGGTTCCCAGTGGAGAAGTATGGGAGGTTGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATTACTCAATAAGACGCGGGAACTTTTTTATGTTCGGATACAATGCTCATTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATTTCGGATGTGGTTGAGCATTCTTCCGAATATCTGAGCTATGACCCCGTAGTGCAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGGATGATATTCCAGTTGAACATCAAACTAACGTAATCGATGAAGAAGAGTTTCAAAGGAATGTAGTTTCACTAG.........................................................................................................TAATAAGTGAAGATTGCGAGGAGCACGAACAACAATCCAACATTGTTACCAGTAAGAGAAAGGCAGAGAGGGATGAAGGGATAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAGACCACACGCTCTG................................................................................................TACATTCCGTTGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E416374" ref_strand="+" ref_description="SGN-E416374 	[STM-23-A7]">
      <seq>ttcggatacaatgctcgttctcacttttaatgtcaccatatttgattttagtgcactcagaaattgaatatccaccagcagagattgagtcggatgcttctatagactatttcggatgtggttgagcattcttctgaatatctgagctatgaccctgtagtgcaggagaagaaaaagaataagacaagaaggggaagaagaaggatgatattccagttgaacatcaaactaatgtaatcgatgaagaagagtttcaagggaatgtagtttcactagtaataagtgaagattgtgaggagcacgaacaacaatccaacattgttaccagtaagagaaaggcagagagggatgaagggatagctgataactatcaaagagcaaaagcttttaaatctaagaatccattcattgtatcttttatgcatccatcgtatgtctcgagaccacacgctctgtacattccgttgaaatttgctaggatgtatttcatggggaacagtggcaatttagtgttgcgtgttccagggaaaggatcttggcctgtcaaatgcattatgctaaggaaagatgctaaagttacttgtggttggaaggcgttcgttctggacaataagttaaaatatggtgaatgtttgtgtcctttgagtaattaatgacactaagctttccttgatagatgtcaccatatttccagggatttctgatggtacaaactgagtctatcaatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="58582" stop="60101"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58882" g_stop="59152" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59153" i_stop="59257" i_length="105">
            <donor d_prob="0.986" d_score="0.90"/>
            <acceptor a_prob="0.608" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59258" g_stop="59430" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="455" r_length="179" r_score="0.913"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59431" i_stop="59526" i_length="96">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59527" g_stop="59801" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="731" r_length="276" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E416374" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58882" e_stop="59152"/>
          <exon e_start="59258" e_stop="59430"/>
          <exon e_start="59527" e_stop="59801"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGATACAATGCTCGTTCTCA-TTTTAATGTCACTATATTTGATTTTAGTGCA-GCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGA-TATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAG-AGAAAAAGAATAAGACAAGAAGGGGAAGAAG-AGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGAAGAGTCTCAACTGAATGTAGTTTCACTAGGTAAGAAAACTTCTTATCTGGTTTATTAGCTATGAACAGAATGAAATCAGTCGTCTTACATTATAATTTAATAGTAATACATTGTTTTTGGATATCTATTTCAAGTAATAAGTGAAGATTGTGA-G-G-A-G--CAACAATCCAACATTGTTACCAGTAAGAGAAAGGAAGAGAGGGATGAAGGGACAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAAACCACACGCTCTGGTAAGCTATGAAACTTTGTAGAATGCCTGATACCCGACCCCTTTTAATTCATATGCACATCCTTCAACTCAATTTATGATTTACCTCTTTTGGCAGTACATTCCGTTGAAATTTGCTAGGATGTATTTAATGCGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGTCTGTCAAATGTGTTATGCTAAGGAAAGATGCTAAAGTTACTTGTGGTTGGAAGGCGTTCGTTCTGGACAATAAGTTAAAATATGGTG-ATGTTTGTGTCTTTGAAGTAATTAATGACACTAAGCTTTCCTTGATAGATGTCACCATATTTCCAGGAATTTCTGATGGTACAAACTGAGTCTATCAATGCTG</genome_strand>
        <mrna_strand>TTCGGATACAATGCTCGTTCTCACTTTTAATGTCACCATATTTGATTTTAGTGCACTCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGCTTCTATAGACTATTTCGGATGTGGTTGAGCATTCTTCTGAATATCTGAGCTATGACCCTGTAGTGCAGGAGAAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAAGGATGATATTCCAGTTGAACATCAAACTAATGTAATCGATGAAGAAGAGTTTCAAGGGAATGTAGTTTCACTAG.........................................................................................................TAATAAGTGAAGATTGTGAGGAGCACGAACAACAATCCAACATTGTTACCAGTAAGAGAAAGGCAGAGAGGGATGAAGGGATAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAGACCACACGCTCTG................................................................................................TACATTCCGTTGAAATTTGCTAGGATGTATTTCATGGGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGCCTGTCAAATGCATTATGCTAAGGAAAGATGCTAAAGTTACTTGTGGTTGGAAGGCGTTCGTTCTGGACAATAAGTTAAAATATGGTGAATGTTTGTGTCCTTTGAGTAATTAATGACACTAAGCTTTCCTTGATAGATGTCACCATATTTCCAGGGATTTCTGATGGTACAAACTGAGTCTATCAATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E416375" ref_strand="+" ref_description="SGN-E416375 	[STM-23-A7]">
      <seq>ttcggatacaatgctcgttctcattttaatgtcactatatttgattttagtgcatcagaaattgaatatccaccagcagagattgagtcggatgattctatagatatttcggatgtggttgagcattcttctgaatatctgagctatgaccctgtagtgcaggagagaaaaagaataagacaagaaggggaagaagaggatgatattccagttgaacatcaaactaatgtaatcgatgaagaagagtttcaagggaatgtagtttcactagtaataagtgaagattgtgaggagcacgaacaacaatccaacattgttaccagtaagagaaaggcagagagggatgaagggatagctgataactatcaaagagcaaaagcttttaaatctaagaatccattcattgtatcttttatgcatccatcgtatgtctcgagaccacacgctctgtacattccgttgaaatttgctaggatgtatttcatggggaacagtggcaatttagtgttgcgtgttccagggaaaggatcttggcctgtcaaatgcattatgctaaggaaagatgctaaagttacttgtggttggaaggcgttcgttctggacaataagttaaaatatggtgatgtttgtgtccttgaagtattaatgacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="58582" stop="60029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58882" g_stop="59152" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59153" i_stop="59257" i_length="105">
            <donor d_prob="0.986" d_score="0.90"/>
            <acceptor a_prob="0.608" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59258" g_stop="59430" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="450" r_length="179" r_score="0.913"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59431" i_stop="59526" i_length="96">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59527" g_stop="59729" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="652" r_length="202" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E416375" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58882" e_stop="59152"/>
          <exon e_start="59258" e_stop="59430"/>
          <exon e_start="59527" e_stop="59729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGAAGAGTCTCAACTGAATGTAGTTTCACTAGGTAAGAAAACTTCTTATCTGGTTTATTAGCTATGAACAGAATGAAATCAGTCGTCTTACATTATAATTTAATAGTAATACATTGTTTTTGGATATCTATTTCAAGTAATAAGTGAAGATTGTGA-G-G-A-G--CAACAATCCAACATTGTTACCAGTAAGAGAAAGGAAGAGAGGGATGAAGGGACAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAAACCACACGCTCTGGTAAGCTATGAAACTTTGTAGAATGCCTGATACCCGACCCCTTTTAATTCATATGCACATCCTTCAACTCAATTTATGATTTACCTCTTTTGGCAGTACATTCCGTTGAAATTTGCTAGGATGTATTTAATGCGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGTCTGTCAAATGTGTTATGCTAAGGAAAGATGCTAAAGTTACTTGTGGTTGGAAGGCGTTCGTTCTGGACAATAAGTTAAAATATGGTGATGTTTGTGTCTTTGAAGTAATTAATGACAC</genome_strand>
        <mrna_strand>TTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCATCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATTTCGGATGTGGTTGAGCATTCTTCTGAATATCTGAGCTATGACCCTGTAGTGCAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGGATGATATTCCAGTTGAACATCAAACTAATGTAATCGATGAAGAAGAGTTTCAAGGGAATGTAGTTTCACTAG.........................................................................................................TAATAAGTGAAGATTGTGAGGAGCACGAACAACAATCCAACATTGTTACCAGTAAGAGAAAGGCAGAGAGGGATGAAGGGATAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAGACCACACGCTCTG................................................................................................TACATTCCGTTGAAATTTGCTAGGATGTATTTCATGGGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGCCTGTCAAATGCATTATGCTAAGGAAAGATGCTAAAGTTACTTGTGGTTGGAAGGCGTTCGTTCTGGACAATAAGTTAAAATATGGTGATGTTTGTGTCCTTGAAGT-ATTAATGACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E438730" ref_strand="+" ref_description="SGN-E438730 	[cSTA-9-K10]">
      <seq>ttcggatacaatgctcgttctcattttaatgtcactatatttgattttagtgcatcagaaattgaatatccaccagcagagattgagtcggatgattctatagatatttcggatgtggttgagcattcttctgaatatctgagctatgaccctgtagtgcaggagagaaaaagaataagacaagaaggggaagaagaggatgatattccagttgaacatcaaactaatgtaatcgatgaagaagagtttcaagggaatgtagtttcactagtaataagtgaagattgtgaggagcacgaacaacaatccaacattgttaccagtaagagaaaggcagagagggatgaagggatagctgataactatcaaagagcaaaagcttttaaatctaagaatccattcattgtatcttttatgcatccatcgtatgtctcgagaccacacgctctgtacattccgttgaaatttgctaggatgtatttcatggggaacagtggcaatttagtgttgcgtgttccagggaaaggatcttggcctgtcaaatgcattatgctaaggaaagatgctaaagttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="58582" stop="59951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58882" g_stop="59152" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59153" i_stop="59257" i_length="105">
            <donor d_prob="0.986" d_score="0.90"/>
            <acceptor a_prob="0.608" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59258" g_stop="59430" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="450" r_length="179" r_score="0.913"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59431" i_stop="59526" i_length="96">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59527" g_stop="59651" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="575" r_length="125" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E438730" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E438730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58882" e_stop="59152"/>
          <exon e_start="59258" e_stop="59430"/>
          <exon e_start="59527" e_stop="59651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGAAGAGTCTCAACTGAATGTAGTTTCACTAGGTAAGAAAACTTCTTATCTGGTTTATTAGCTATGAACAGAATGAAATCAGTCGTCTTACATTATAATTTAATAGTAATACATTGTTTTTGGATATCTATTTCAAGTAATAAGTGAAGATTGTGA-G-G-A-G--CAACAATCCAACATTGTTACCAGTAAGAGAAAGGAAGAGAGGGATGAAGGGACAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAAACCACACGCTCTGGTAAGCTATGAAACTTTGTAGAATGCCTGATACCCGACCCCTTTTAATTCATATGCACATCCTTCAACTCAATTTATGATTTACCTCTTTTGGCAGTACATTCCGTTGAAATTTGCTAGGATGTATTTAATGCGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGTCTGTCAAATGTGTTATGCTAAGGAAAGATGCTAAAGTTAC</genome_strand>
        <mrna_strand>TTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCATCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATTTCGGATGTGGTTGAGCATTCTTCTGAATATCTGAGCTATGACCCTGTAGTGCAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGGATGATATTCCAGTTGAACATCAAACTAATGTAATCGATGAAGAAGAGTTTCAAGGGAATGTAGTTTCACTAG.........................................................................................................TAATAAGTGAAGATTGTGAGGAGCACGAACAACAATCCAACATTGTTACCAGTAAGAGAAAGGCAGAGAGGGATGAAGGGATAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAGACCACACGCTCTG................................................................................................TACATTCCGTTGAAATTTGCTAGGATGTATTTCATGGGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGCCTGTCAAATGCATTATGCTAAGGAAAGATGCTAAAGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E466056" ref_strand="+" ref_description="SGN-E466056 	[cPRO-23-E23]">
      <seq>attttccctctagttttaagaaaaagtctctttatcaggaatagaggaatatctacgtagtagtgaaccctgttatttcccggcggaaaagtaaattgccgccgtcgccgtcgccgtattccgtcttcaacttcgtcttcatcttctacagaacaagtcaagagaatcagaaacctcaaaaagcaaaatttcatgcaatccaatttgtacccatcaacccacacccgttgttgtttctcatggaactcagacaaaccccaaatccccacacccaaaatcctcaaacacaagctcaaaacttctattatttccccaggtgtatctacttctctgaaaacttcattaaattttggagaagaaaagtttaataagcaacaagaagaaactactctgcctttttatcttccagtctctgttcgcaaatcagatagtcattctaggtatatttgggatgggaaagacttgaagttggtatctgttgacggaaattctttttctatatccgatttcgactctaattttgaagatacagttcataagttggtcagaatttgtgtttcggcaatcagaaatttctttcttccgaggcaagttagtcgtaattaccttgaatacgtgaagtggaagtttgttcatcgtgtttccagttctgctctccaagttctggcgacccaggctatgttacgggcaattggaattgggaactcccgttcacttccattggctgctgcactaaattgggtcctgaaggatggtcttggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="61284" stop="63303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61584" g_stop="62277" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62278" i_stop="62915" i_length="638">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.805" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62916" g_stop="63003" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="763" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E466056" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>782</cumulative_length_of_scored_exons>
        <coverage percentage="1.025" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E466056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61584" e_stop="62277"/>
          <exon e_start="62916" e_stop="63003"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCCCTCTAGTTTTAAGAAAGTCTCT-TTTATCGGGAATAGAAATATCTACGTAGTAGTAGTGATTAGTGAACCCTGTTATTTCCCGGCGGAAAAGTAAATTGCCGCCGCCGCCGTTGCCGTTGCCGTTGCCGTATTCCGTCTTCAACTTTCTCTTCATCTTCCACAGAACAAGTCAAGAGAATCAGAAATCTCTAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACCCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACCTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAGACCTCATTAAATTTTGGGGAAGAAAAGTGTAACAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTTTCGGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGGAATGCTTTTTCGATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATAAGAAATTTCTTTCTTCCGAGGGAAGTTAGTCGTAATTACCTTGAATACGTGAAGTGGAAGTTTGTTCATCGTGTTTCCAGTTCTGCTCTCCAAGTTCTGGCGACCCAGGTACACTTATTTTTTTGGTGTTATACAACAAAGTTTAGATTTTGATGTTGAATTTTAATATCTCAGCTATTTAACTAGTTAATCTTTGGTATTCAATATTCATATTCTGGGTTTTGAACTTGTGAATTGTTGTATACGGTGAAAGTTCCATCTTTGTTTCAGCTACCAAACTTGTAAATTACTTGTATGCTAGGTATTAGAGTTGGCATTTTGATGTTGAATCTTCATATTCGATCTTCTAAAATTGTTGGTGAATGGTAGTAAATTAAGATTTTTATTTTGCATATTCATATCTCAACTATTGAACTTGTAAAACTTGTTAATTAATATATGGTGCACAGTTCAGATTTTAGACTTCATTGTTGAGTTTGGATTCTTCCGTCAGGGCTCATGATGTTTGTTTAGAGTCACTGGTGTAGTTAGTCATTATGATTTTTATATGGAGAATTAACCATTTTGTAGTTCACCTATGGAATTACTCATTATGATCTTTGTGAAGATATGAAGGTACCAGTAGTTTGCTTGATATTTGTGTGCCTGTACAATGTGAGTTAGCATCTAAGGTGCAGATCACTCAAATGCCTTCATTGACAATTTGGGCTTGCGTAATCGGTTGTGTTTTGTGAATGACGACACAGGCTATGTTGCGGGCAATTGGAATTGGGAACTCCCGTTCACTTCCATTGGCTGCTGCACTAAATTGGGTCCTGAAGGATGGTCTTGGAC</genome_strand>
        <mrna_strand>ATTTTCCCTCTAGTTTTAAGAAAAAGTCTCTTTATCAGGAATAGAGGAATAT-C-TA--CGTAG----TAGTGAACCCTGTTATTTCCCGGCGGAAAAGTAAATTGCCGCCGTCGCCGT---------C---GCCGTATTCCGTCTTCAACTTCGTCTTCATCTTCTACAGAACAAGTCAAGAGAATCAGAAACCTCAAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACTCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACTTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAAACTTCATTAAATTTTGGAGAAGAAAAGTTTAATAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTCTCTGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGAAATTCTTTTTCTATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATCAGAAATTTCTTTCTTCCGAGGCAAGTTAGTCGTAATTACCTTGAATACGTGAAGTGGAAGTTTGTTCATCGTGTTTCCAGTTCTGCTCTCCAAGTTCTGGCGACCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGTTACGGGCAATTGGAATTGGGAACTCCCGTTCACTTCCATTGGCTGCTGCACTAAATTGGGTCCTGAAGGATGGTCTTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E460224" ref_strand="+" ref_description="SGN-E460224 	[cPRO-30-E22]">
      <seq>atttcccggcggaaaagtaaattgccgccgtcgccgtcgccgtattccgtcttcaacttcgtcttcatcttctacagaacaagtcaagagaatcagaaacctcaaaaagcaaaatttcatgcaatccaatttgtacccatcaacccacacccgttgttgtttctcatggaactcagacaaaccccaaatccccacacccaaaatcctcaaacacaagctcaaaacttctattatttccccaggtgtatctacttctctgaaaacttcattaaattttggagaagaaaagtttaataagcaacaagaagaaactactctgcctttttatcttccagtctctgttcgcaaatcagatagtcattctaggtatatttgggatgggaaagacttgaagttggtatctgttgacggaaattctttttctatatccgatttcgactctaattttgaagatacagttcataagttggtcagaatttgtgtttcggcaatcagaaatttctttcttccgaggcaagttagtcgtaattaccttgaatacgtgaagtggaagtttgttcatcgtgtttccagttctgctctccaagttctgggcgaccaggctatgttacggggcattggaattgggaactcccgttcacttccattggctgctgcactaaatgggtcctgaaggatgggcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="61365" stop="63302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61665" g_stop="62277" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62278" i_stop="62915" i_length="638">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.805" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62916" g_stop="63002" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="687" r_length="86" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E460224" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.019" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E460224" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61665" e_stop="62277"/>
          <exon e_start="62916" e_stop="63002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCCCGGCGGAAAAGTAAATTGCCGCCGCCGCCGTTGCCGTTGCCGTTGCCGTATTCCGTCTTCAACTTTCTCTTCATCTTCCACAGAACAAGTCAAGAGAATCAGAAATCTCTAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACCCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACCTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAGACCTCATTAAATTTTGGGGAAGAAAAGTGTAACAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTTTCGGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGGAATGCTTTTTCGATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATAAGAAATTTCTTTCTTCCGAGGGAAGTTAGTCGTAATTACCTTGAATACGTGAAGTGGAAGTTTGTTCATCGTGTTTCCAGTTCTGCTCTCCAAGTTCT-GGCGACCCAGGTACACTTATTTTTTTGGTGTTATACAACAAAGTTTAGATTTTGATGTTGAATTTTAATATCTCAGCTATTTAACTAGTTAATCTTTGGTATTCAATATTCATATTCTGGGTTTTGAACTTGTGAATTGTTGTATACGGTGAAAGTTCCATCTTTGTTTCAGCTACCAAACTTGTAAATTACTTGTATGCTAGGTATTAGAGTTGGCATTTTGATGTTGAATCTTCATATTCGATCTTCTAAAATTGTTGGTGAATGGTAGTAAATTAAGATTTTTATTTTGCATATTCATATCTCAACTATTGAACTTGTAAAACTTGTTAATTAATATATGGTGCACAGTTCAGATTTTAGACTTCATTGTTGAGTTTGGATTCTTCCGTCAGGGCTCATGATGTTTGTTTAGAGTCACTGGTGTAGTTAGTCATTATGATTTTTATATGGAGAATTAACCATTTTGTAGTTCACCTATGGAATTACTCATTATGATCTTTGTGAAGATATGAAGGTACCAGTAGTTTGCTTGATATTTGTGTGCCTGTACAATGTGAGTTAGCATCTAAGGTGCAGATCACTCAAATGCCTTCATTGACAATTTGGGCTTGCGTAATCGGTTGTGTTTTGTGAATGACGACACAGGCTATGTTGCGGGCAATTGGAATTGGGAACTCCCGTTCACTTCCATTGGCTGCTGCACTAAATTGGGTCCTGAAGGATGGTCTTGGA</genome_strand>
        <mrna_strand>ATTTCCCGGCGGAAAAGTAAATT------GCCGCCG-T-C-G---CCGTCGCCGTATTCCGTCTTCAACTTCGTCTTCATCTTCTACAGAACAAGTCAAGAGAATCAGAAACCTCAAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACTCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACTTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAAACTTCATTAAATTTTGGAGAAGAAAAGTTTAATAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTCTCTGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGAAATTCTTTTTCTATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATCAGAAATTTCTTTCTTCCGAGGCAAGTTAGTCGTAATTACCTTGAATACGTGAAGTGGAAGTTTGTTCATCGTGTTTCCAGTTCTGCTCTCCAAGTTCTGGGCGA-CCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGTTACGGGGCATTGGAATTGGGAACTCCCGTTCACTTCCATTGGCTGCTGCACTAAA-TGGGTCCTGAAGGATGGGCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E460364" ref_strand="+" ref_description="SGN-E460364 	[cPRO-30-F22]">
      <seq>atttcccggcggaaaagtaaattgccgccgtcgccgtcgccgtattccgtcttcaacttcgtcttcatcttctacagaacaagtcaagagaatcagaaacctcaaaaagcaaaatttcatgcaatccaatttgtacccatcaacccacacccgttgttgtttctcatggaactcagacaaaccccaaatccccacacccaaaatcctcaaacacaagctcaaaacttctattatttccccaggtgtatctacttctctgaaaacttcattaaattttggagaagaaaagtttaataagcaacaagaagaaactactctgcctttttatcttccagtctctgttcgcaaatcagatagtcattctaggtatatttgggatgggaaagacttgaagttggtatctgttgacggaaattctttttctatatccgatttcgactctaattttgaagatacagttcataagttggtcagaatttgtgtttcggcaatcagaaaattctttcttccgaggcaagttagtcgtaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="61365" stop="62505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61665" g_stop="62205" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E460364" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.023" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E460364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61665" e_stop="62205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCCCGGCGGAAAAGTAAATTGCCGCCGCCGCCGTTGCCGTTGCCGTTGCCGTATTCCGTCTTCAACTTTCTCTTCATCTTCCACAGAACAAGTCAAGAGAATCAGAAATCTCTAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACCCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACCTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAGACCTCATTAAATTTTGGGGAAGAAAAGTGTAACAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTTTCGGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGGAATGCTTTTTCGATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATAAGAAATTTCTTTCTTCCGAGGGAAGTTAGTCGTAAT</genome_strand>
        <mrna_strand>ATTTCCCGGCGGAAAAGTAAATT------GCCGCCG-T-C-G---CCGTCGCCGTATTCCGTCTTCAACTTCGTCTTCATCTTCTACAGAACAAGTCAAGAGAATCAGAAACCTCAAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACTCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACTTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAAACTTCATTAAATTTTGGAGAAGAAAAGTTTAATAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTCTCTGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGAAATTCTTTTTCTATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATCAGAAAATTCTTTCTTCCGAGGCAAGTTAGTCGTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E436221" ref_strand="+" ref_description="SGN-E436221 	[STM-62-P3]">
      <seq>atttcccggcggaaaagtaaattgccgccgtcgccgtcgccgtattccgtcttcaacttcgtcttcatcttctacagaacaagtcaagagaatcagaaacctcaaaaagcaaaatttcatgcaatccaatttgtacccatcaacccacacccgttgttgtttctcatggaactcagacaaaccccaaatccccacacccaaaatcctcaaacacaagctcaaaacttctattatttccccaggtgtatctacttctctgaaaacttcattaaattttggagaagaaaagtttaataagcaacaagaagaaactactctgcctttttatcttccagtctctgttcgcaaatcagatagtcattctaggtatatttgggatgggaaagacttgaagttgggatctgttgacggaaattctttttctatatccgatttcgactctaattttgaagtacagttcataagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="61365" stop="62445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61665" g_stop="62145" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E436221" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.028" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E436221" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61665" e_stop="62145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCCCGGCGGAAAAGTAAATTGCCGCCGCCGCCGTTGCCGTTGCCGTTGCCGTATTCCGTCTTCAACTTTCTCTTCATCTTCCACAGAACAAGTCAAGAGAATCAGAAATCTCTAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACCCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACCTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAGACCTCATTAAATTTTGGGGAAGAAAAGTGTAACAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTTTCGGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGGAATGCTTTTTCGATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTG</genome_strand>
        <mrna_strand>ATTTCCCGGCGGAAAAGTAAATT------GCCGCCG-T-C-G---CCGTCGCCGTATTCCGTCTTCAACTTCGTCTTCATCTTCTACAGAACAAGTCAAGAGAATCAGAAACCTCAAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACTCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACTTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAAACTTCATTAAATTTTGGAGAAGAAAAGTTTAATAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTCTCTGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGGATCTGTTGACGGAAATTCTTTTTCTATATCCGATTTCGACTCTAATTTTGAAG-TACAGTTCATAAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E264461" ref_strand="+" ref_description="SGN-E264461 	[cLEG-67-H12]">
      <seq>atcttccagtttcggttcgcaaatcagatagtcattctaggtatatttgttatggcaaagacttgaagttggtatctgctgacgggaatgctttttcgatatccgatttcgactctaattttgaagatacagttcataagttggtcagaatttgtgtttcggcaataagaaatttctttcttccgagggaagttagtcgtaattaccttgaatacgtgaagtggaagtttgttcatcgtgtttccagttctgctctccaagttctggcgacccaggctatgttgcgggcaattggaattgggaactcccgttcacttccattggctgctgcactaaattgggtcctgaaggatggtcttggacggttgtgcaggtgcatctacactgctagcctagcatcttcttttgataccaatcttaagagagtaaggttctgtacatcagttctcttcagtttaagcattggagttgaattgttgactcctgtattcccacaatactttttgatgcttgcatcaattgccaacattgccaagcaaataagccttgcatgttacctagcaaccagtactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="61703" stop="63755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62003" g_stop="62277" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62278" i_stop="62915" i_length="638">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.805" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62916" g_stop="63062" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="422" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63063" i_stop="63308" i_length="246">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63309" g_stop="63455" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="569" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63456" i_stop="63715" i_length="260">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63716" g_stop="63720" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="574" r_length="5" r_score="0.400"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E264461" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264461" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62003" e_stop="62277"/>
          <exon e_start="62916" e_stop="63062"/>
          <exon e_start="63309" e_stop="63455"/>
          <exon e_start="63716" e_stop="63720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTCCAGTTTCGGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGGAATGCTTTTTCGATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATAAGAAATTTCTTTCTTCCGAGGGAAGTTAGTCGTAATTACCTTGAATACGTGAAGTGGAAGTTTGTTCATCGTGTTTCCAGTTCTGCTCTCCAAGTTCTGGCGACCCAGGTACACTTATTTTTTTGGTGTTATACAACAAAGTTTAGATTTTGATGTTGAATTTTAATATCTCAGCTATTTAACTAGTTAATCTTTGGTATTCAATATTCATATTCTGGGTTTTGAACTTGTGAATTGTTGTATACGGTGAAAGTTCCATCTTTGTTTCAGCTACCAAACTTGTAAATTACTTGTATGCTAGGTATTAGAGTTGGCATTTTGATGTTGAATCTTCATATTCGATCTTCTAAAATTGTTGGTGAATGGTAGTAAATTAAGATTTTTATTTTGCATATTCATATCTCAACTATTGAACTTGTAAAACTTGTTAATTAATATATGGTGCACAGTTCAGATTTTAGACTTCATTGTTGAGTTTGGATTCTTCCGTCAGGGCTCATGATGTTTGTTTAGAGTCACTGGTGTAGTTAGTCATTATGATTTTTATATGGAGAATTAACCATTTTGTAGTTCACCTATGGAATTACTCATTATGATCTTTGTGAAGATATGAAGGTACCAGTAGTTTGCTTGATATTTGTGTGCCTGTACAATGTGAGTTAGCATCTAAGGTGCAGATCACTCAAATGCCTTCATTGACAATTTGGGCTTGCGTAATCGGTTGTGTTTTGTGAATGACGACACAGGCTATGTTGCGGGCAATTGGAATTGGGAACTCCCGTTCACTTCCATTGGCTGCTGCACTAAATTGGGTCCTGAAGGATGGTCTTGGACGGTTGTGCAGGTGCATCTACACTGCTAGCCTAGCATCTTCTTTTGATACCAATCTTAAGGTATACCTTTCTAACATAAAACAACAGGGGATAGTTTGTGCAACTCATCTTATAAAGCTTATTTTACTGATTTTTTATGATAAAAATTCAGTTTCATCTTTTGCAAAATGATGCTTATATATCTTCTATAAGAATGTTGACTTGTATGCCAGAAAGATTGCCATTTTTAAAGCAAGATTACCTCAAGAGACTATGTAAAAGTTTCATCTGTTTGTTTCTTACTTTGTTTTATGGGGTTGGCTGCAGAGAGTAAGGTTCTGTACATCAGTTCTCTTCAGTTTAAGCATTGGAGTTGAATTGTTGACTCCTGTATTCCCACAATACTTTTTGATGCTTGCATCAATTGCCAACATTGCCAAGCAAATAAGCCTTGCATGTTACCTAGCAACCAGTGTAAGTCTCAGCTACAAAACATATGATGTTATATTTATATGCATGTGTAACACTTTTGGGATCTGATCTCAAGTTCTCCAGCTTTAGCTCTTTGTTATGATACTTGTTAGATGTGAGCTACTTATTTTGGCTGCAAATGATACTTTTTCCCTTATCTTGCCATTTAGCTGTTTACCATTGTTTTATCTCCCTTTATAGTTTCTAAGAATTCCACTGCAATTTGGCATATAAATTGATTTCTTCACAATTTTGTTATGTAGAGAGG</genome_strand>
        <mrna_strand>ATCTTCCAGTTTCGGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGTTATGGCAAAGACTTGAAGTTGGTATCTGCTGACGGGAATGCTTTTTCGATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATAAGAAATTTCTTTCTTCCGAGGGAAGTTAGTCGTAATTACCTTGAATACGTGAAGTGGAAGTTTGTTCATCGTGTTTCCAGTTCTGCTCTCCAAGTTCTGGCGACCCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTATGTTGCGGGCAATTGGAATTGGGAACTCCCGTTCACTTCCATTGGCTGCTGCACTAAATTGGGTCCTGAAGGATGGTCTTGGACGGTTGTGCAGGTGCATCTACACTGCTAGCCTAGCATCTTCTTTTGATACCAATCTTAAG......................................................................................................................................................................................................................................................AGAGTAAGGTTCTGTACATCAGTTCTCTTCAGTTTAAGCATTGGAGTTGAATTGTTGACTCCTGTATTCCCACAATACTTTTTGATGCTTGCATCAATTGCCAACATTGCCAAGCAAATAAGCCTTGCATGTTACCTAGCAACCAGT....................................................................................................................................................................................................................................................................ACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E244458" ref_strand="+" ref_description="SGN-E244458 	[cLEF-3-O8]">
      <seq>tgtgcaagtgcatctacactgctagcctagcatcttcttttgataccaatcttaagagagtcccgctctgtacatcagttctcttcagtttaagcattggagttgaattgttgactcctgtattcccacaatactttttgatgcttgcatcaattgccaacattgccaagcaaatacgccttgcgtgttacctagcaaccagtactgctgttcatagaagctttgcacttgctgataacctatgcgaggtttctgcaaaaggacagattcaaacaggctgctttgataatcttggggttacacttgctgcaaccctgaacatactgtctgctaataatccgcgattgcatgctggtctaccgtttgtgatgtaccctgtcttatctgtgcttgacctttctggtatttatcacggactaaagcatgtgcatttgcagacattaactatggataggcttaacatcattataag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="62707" stop="65479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63007" g_stop="63062" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63063" i_stop="63308" i_length="246">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63309" g_stop="63455" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="203" r_length="147" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63456" i_stop="64278" i_length="823">
            <donor d_prob="0.990" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64279" g_stop="64341" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="266" r_length="63" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64342" i_stop="64423" i_length="82">
            <donor d_prob="0.980" d_score="0.96"/>
            <acceptor a_prob="0.949" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64424" g_stop="64500" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="343" r_length="77" r_score="0.935"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64501" i_stop="64840" i_length="340">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.630" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64841" g_stop="64946" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="449" r_length="106" r_score="0.934"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64947" i_stop="65156" i_length="210">
            <donor d_prob="0.885" d_score="0.92"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65157" g_stop="65179" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="472" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E244458" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63007" e_stop="63062"/>
          <exon e_start="63309" e_stop="63455"/>
          <exon e_start="64279" e_stop="64341"/>
          <exon e_start="64424" e_stop="64500"/>
          <exon e_start="64841" e_stop="64946"/>
          <exon e_start="65157" e_stop="65179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGCAGGTGCATCTACACTGCTAGCCTAGCATCTTCTTTTGATACCAATCTTAAGGTATACCTTTCTAACATAAAACAACAGGGGATAGTTTGTGCAACTCATCTTATAAAGCTTATTTTACTGATTTTTTATGATAAAAATTCAGTTTCATCTTTTGCAAAATGATGCTTATATATCTTCTATAAGAATGTTGACTTGTATGCCAGAAAGATTGCCATTTTTAAAGCAAGATTACCTCAAGAGACTATGTAAAAGTTTCATCTGTTTGTTTCTTACTTTGTTTTATGGGGTTGGCTGCAGAGAGTAAGGTTCTGTACATCAGTTCTCTTCAGTTTAAGCATTGGAGTTGAATTGTTGACTCCTGTATTCCCACAATACTTTTTGATGCTTGCATCAATTGCCAACATTGCCAAGCAAATAAGCCTTGCATGTTACCTAGCAACCAGTGTAAGTCTCAGCTACAAAACATATGATGTTATATTTATATGCATGTGTAACACTTTTGGGATCTGATCTCAAGTTCTCCAGCTTTAGCTCTTTGTTATGATACTTGTTAGATGTGAGCTACTTATTTTGGCTGCAAATGATACTTTTTCCCTTATCTTGCCATTTAGCTGTTTACCATTGTTTTATCTCCCTTTATAGTTTCTAAGAATTCCACTGCAATTTGGCATATAAATTGATTTCTTCACAATTTTGTTATGTAGAGAGGGCTGTTAAGATCTGAAGTGCCTTTGGCAAATTCAAAATAGTAGGCTAATAAATATATGCACTTATTAGGCTTTGAATTTCTACTATGAGGTCCCAGGTTAACGATGGCATAATAAGCTGACACACTTAATTTTGTCACTTGGTTGAATTGCCTTCTGAAAGTGAAATTAGTTGAAGTTGAGTACTCTAGCCTTCTAATTGCTTCCGCTAATGACCAATTCACTTTCACATGTCCTAGAGATCTGAGAGAAACAATGTCTTCAGGGTTTAAGTGTTTTTAGCATATCTGTAACAGCTGGAAGAGAATTGATGCAATTATACCTTGAATTTTTCCTCTAACATGCAAGTCAAATATGAAATCATCAGGGAGTAACTGCATGTTTTTGTCAGTTCATTTGGAAAATGGCTATTTTCAGTAATTGTAGTTCGTTTAAATAGCCAAACCGCATGTGAAATTTTTAGCTATATGAATAAGTACAGGTGTCTTCTGGATTTATCAGTCATTGATAAATTTGAGATAGAATTTCTGTTTGAGAATTTATTGTTGACATGTTCACAGACTGCTGTTCATAGAAGCTTTGCAATTGCTGATAACCTAGGCGAGGTTTCTGCAAAAGGACAGGTTCTCTACAATATTTCATCATGTCATGCTCGATTCTAATTAGTTTCACTCTTCCAATCTGACTGTTGGTTTGTGTTTTTAGATTCAAACAGTCTGCTTTGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAGGTTTGTTTGTTTTCCAACTTGAATTTCTGAAGTATCACTGTCAGCTTTATTTATGTTTTGAAATTATATAGAGATTCTTTGCATTTGCCTCTCTGAACCTATCCATTTGGTCTATCTTTTTGTGCTTGAAGTGGAACAGTTTATATCTACACAACATGGGTCTTACTATTTCCTTTTCACACTGTAATATGAGAAGTGAAAATGTGATTTGTATCTTCCACCATTTCCTTATACAATAAGATGGAATAAGATCCTAAAAGCAAGAATTGGTTGACACATTTTTGTGCTGCTTCTGGTTATCCCTGTAATGTAGATTTCTGACTTCTGAATGATATAAAAGATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAGGTTGGCCCTCGTTCTCTGTGCTGAAAGCATTAGTGTTCAAGTTGAATTATACTTCCTTTTTTTGGCTACTAAACTTAGGTTATATTTTCTTCAAGGAGAAGAAATATGTGATATGAGTTATGACATGATCTATTTAACAGTCTTTATTGAGTGAACATTAATCATCTTTACGTGTTGATTCGGATATCACTCATTTTATATTAATTTCAGGATAGGCTTAACATCATTATAAG</genome_strand>
        <mrna_strand>TGTGCAAGTGCATCTACACTGCTAGCCTAGCATCTTCTTTTGATACCAATCTTAAG......................................................................................................................................................................................................................................................AGAGTCCCGCTCTGTACATCAGTTCTCTTCAGTTTAAGCATTGGAGTTGAATTGTTGACTCCTGTATTCCCACAATACTTTTTGATGCTTGCATCAATTGCCAACATTGCCAAGCAAATACGCCTTGCGTGTTACCTAGCAACCAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGTTCATAGAAGCTTTGCACTTGCTGATAACCTATGCGAGGTTTCTGCAAAAGGACAG..................................................................................ATTCAAACAGGCTGCTTTGATAATCTTGGGGTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCGCG....................................................................................................................................................................................................................................................................................................................................................ATTGCATGCTGGTCTACCGTTTGTGATGTACCCTGTCTTATCTGTGCTTGACCTTTCTGGTATTTATCACGGACTAAAGCATGTGCATTTGCAGACATTAACTATG..................................................................................................................................................................................................................GATAGGCTTAACATCATTATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E448502" ref_strand="-" ref_description="SGN-E448502 	[cSTS-3-K10]">
      <seq>aggttatcagcaactgcaaagcttctatgaacagcagtctgttgacatgtcaacaataaattctcaaacagaaattctatcttaaatttgttaatgttactgataaatccagaagacacctgtgcttattcatatcactaaaaatttaacatgcgatttggctatttaagcgaactacaattagtcaattactgaacatagccattttccaaataaactggcaaaaacaagcagttactccctgataatttcatatttcacttgcatgttagaggagaaactcaaggtataattgcatcaattctcttccagctgttacagatattctaaaaacgcttaaatccagaagacattgtttctctcagatctctaggacttgtgaaagtgaattggtcattagcagaagcaattagaaggctagagtactcaacttcaactaatttcacttgcagaaagcaattcaaccaagtgacaaaattaagtgtgtcagctttattatgccatagttaacctgggacctcacagtagaaattcaaagcctcaaaagtgcatatatttattagcctactattttgaatatgccaaaggcacttcagatcttaatagctctctacataacaaaattttgaagaaatcaatttatatgtcaaattgcagtggaattgttagaaaaaaaaaaaaaaaaaaaaactcgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="64616" stop="63347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64316" g_stop="63654" g_length="663"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="672" r_length="672" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="673" polyA_stop="691"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E448502" ref_strand="-">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448502" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="64316" e_stop="63654"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTATCAGCAATTGCAAAGCTTCTATGAACAGCAGTCTGTGAACATGTCAACAATAAATTCTCAAACAGAAATTCTATCTCAAATTTATCAATG--ACTGATAAATCCAGAAGACACCTGTACTTATTCATATAGCTAAAAATTTCACATGCGGTTTGGCTATTTAAACG-A--AC---TA--CAATTACTGAAAATAGCCATTTTCCAAATGAACTGACAAAAACATGCAGTTACTCCCTGATGATTTCATATTTGACTTGCATGTTAGAGGAAAAATTCAAGGTATAATTGCATCAATTCTCTTCCAGCTGTTACAGATATGCTAAAAACACTTAAACCCTGAAGACATTGTTTCTCTCAGATCTCTAGGACATGTGAAAGTGAATTGGTCATTAGCGGAAGCAATTAGAAGGCTAGAGTACTCAACTTCAACTAATTTCACTTTCAGAAGGCAATTCAACCAAGTGACAAAATTAAGTGTGTCAGC-TTATTATGCCATCGTTAACCTGGGACCTCATAGTAGAAATTCAAAGCCTAATAAGTGCATATATTTATTAGCCTACTATTTTGAATTTGCCAAAGGCACTTCAGATCTTAACAGCCCTCTCTACATAACAAAATTGTGAAGAAATCAATTTATATGCCAAATTGCAGTGGAATTCTTAGAAA</genome_strand>
        <mrna_strand>AGGTTATCAGCAACTGCAAAGCTTCTATGAACAGCAGTCTGTTGACATGTCAACAATAAATTCTCAAACAGAAATTCTATCTTAAATTTGTTAATGTTACTGATAAATCCAGAAGACACCTGTGCTTATTCATATCACTAAAAATTTAACATGCGATTTGGCTATTTAAGCGAACTACAATTAGTCAATTACTGAACATAGCCATTTTCCAAATAAACTGGCAAAAACAAGCAGTTACTCCCTGATAATTTCATATTTCACTTGCATGTTAGAGGAGAAACTCAAGGTATAATTGCATCAATTCTCTTCCAGCTGTTACAGATATTCTAAAAACGCTTAAATCCAGAAGACATTGTTTCTCTCAGATCTCTAGGACTTGTGAAAGTGAATTGGTCATTAGCAGAAGCAATTAGAAGGCTAGAGTACTCAACTTCAACTAATTTCACTTGCAGAAAGCAATTCAACCAAGTGACAAAATTAAGTGTGTCAGCTTTATTATGCCATAGTTAACCTGGGACCTCACAGTAGAAATTCAAAGCCTCAAAAGTGCATATATTTATTAGCCTACTATTTTGAATATGCCAAAGGCACTTCAGATCTTAATAG--CTCTCTACATAACAAAATTTTGAAGAAATCAATTTATATGTCAAATTGCAGTGGAATTGTTAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E422513" ref_strand="-" ref_description="SGN-E422513 	[STM-40-F17]">
      <seq>ataatttcatatttcactcgcatgttagaggagaaactcaaggtataattgcatcaattctcttccagctgttacagatattctaaaaacgcttaaatccagaagacattgtttctctcagatctctaggacttgtgaaagtgaattggtcattagcagaagcaattagaaggctagagtactcaacttcaactaatttcacttgcagaaagcaattcaaccaagtgacaaaattaagtgtgtcagctttattatgccatagttaacctgggacctcacagtagaaattcaaagcctcaaaagtgcatatatttattagcctactattttgaatatgccaaaggcacttcagatcttaatagctctctacataacaaaattttgaagaaatcaatttatatgtcaaattgcagtggaaaaaatagaaaaaaaaaaaaaaaaaaaaactcgagactagttctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="64382" stop="63364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64082" g_stop="63665" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="417" r_length="417" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="426" polyA_stop="447"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E422513" ref_strand="-">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E422513" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="64082" e_stop="63665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATTTCATATTTGACTTGCATGTTAGAGGAAAAATTCAAGGTATAATTGCATCAATTCTCTTCCAGCTGTTACAGATATGCTAAAAACACTTAAACCCTGAAGACATTGTTTCTCTCAGATCTCTAGGACATGTGAAAGTGAATTGGTCATTAGCGGAAGCAATTAGAAGGCTAGAGTACTCAACTTCAACTAATTTCACTTTCAGAAGGCAATTCAACCAAGTGACAAAATTAAGTGTGTCAGC-TTATTATGCCATCGTTAACCTGGGACCTCATAGTAGAAATTCAAAGCCTAATAAGTGCATATATTTATTAGCCTACTATTTTGAATTTGCCAAAGGCACTTCAGATCTTAACAGCCCTCTCTACATAACAAAATTGTGAAGAAATCAATTTATATGCCAAATTGCAGTGGA</genome_strand>
        <mrna_strand>ATAATTTCATATTTCACTCGCATGTTAGAGGAGAAACTCAAGGTATAATTGCATCAATTCTCTTCCAGCTGTTACAGATATTCTAAAAACGCTTAAATCCAGAAGACATTGTTTCTCTCAGATCTCTAGGACTTGTGAAAGTGAATTGGTCATTAGCAGAAGCAATTAGAAGGCTAGAGTACTCAACTTCAACTAATTTCACTTGCAGAAAGCAATTCAACCAAGTGACAAAATTAAGTGTGTCAGCTTTATTATGCCATAGTTAACCTGGGACCTCACAGTAGAAATTCAAAGCCTCAAAAGTGCATATATTTATTAGCCTACTATTTTGAATATGCCAAAGGCACTTCAGATCTTAATAG--CTCTCTACATAACAAAATTTTGAAGAAATCAATTTATATGTCAAATTGCAGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E391792" ref_strand="+" ref_description="SGN-E391792 	[TUS-24-D11]">
      <seq>tgcaattgctgataacctaggcgaggtttctgcaaaaggacagattcaaacagtctgctttgataatcttggtcttacacttgctgcaaccctgaacatactgtctgctaataatccaagattgcaggctggtctaccatttgtgatgtaccctgtcttctctgtgcttgacctttttggtatttatcaaggactaaagcatgtgcatctgcagacattaactaaggataggcttaacatcattataagcacatggattcaacaaggatttgtcccatctcctgaagaggtgagtaaacaggagggtattggcttatcttggagcagaggtaatttttaacttaaattttgccgtaacaaggccttattgcttggtttatcgctacatttttagtaaaggaacattcttaatcagctttaatcaggcagagagccatggtcaatcagaattggttgcttaaatcctagacgttgcacagcaaagctatctgtgatgacgatgcaatctttgaatagtgaagacttatatttcttgagccccagagagtttgactagtgaactgaaaaggaaccaggagtatggtgtcctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="63999" stop="65815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64299" g_stop="64341" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64342" i_stop="64423" i_length="82">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64424" g_stop="64500" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="120" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64501" i_stop="64840" i_length="340">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.630" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64841" g_stop="64946" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="226" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64947" i_stop="65156" i_length="210">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65157" g_stop="65507" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="578" r_length="352" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65508" i_stop="65610" i_length="103">
            <donor d_prob="0.099" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65611" g_stop="65624" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="592" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E391792" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64299" e_stop="64341"/>
          <exon e_start="64424" e_stop="64500"/>
          <exon e_start="64841" e_stop="64946"/>
          <exon e_start="65157" e_stop="65507"/>
          <exon e_start="65611" e_stop="65624"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATTGCTGATAACCTAGGCGAGGTTTCTGCAAAAGGACAGGTTCTCTACAATATTTCATCATGTCATGCTCGATTCTAATTAGTTTCACTCTTCCAATCTGACTGTTGGTTTGTGTTTTTAGATTCAAACAGTCTGCTTTGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAGGTTTGTTTGTTTTCCAACTTGAATTTCTGAAGTATCACTGTCAGCTTTATTTATGTTTTGAAATTATATAGAGATTCTTTGCATTTGCCTCTCTGAACCTATCCATTTGGTCTATCTTTTTGTGCTTGAAGTGGAACAGTTTATATCTACACAACATGGGTCTTACTATTTCCTTTTCACACTGTAATATGAGAAGTGAAAATGTGATTTGTATCTTCCACCATTTCCTTATACAATAAGATGGAATAAGATCCTAAAAGCAAGAATTGGTTGACACATTTTTGTGCTGCTTCTGGTTATCCCTGTAATGTAGATTTCTGACTTCTGAATGATATAAAAGATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAGGTTGGCCCTCGTTCTCTGTGCTGAAAGCATTAGTGTTCAAGTTGAATTATACTTCCTTTTTTTGGCTACTAAACTTAGGTTATATTTTCTTCAAGGAGAAGAAATATGTGATATGAGTTATGACATGATCTATTTAACAGTCTTTATTGAGTGAACATTAATCATCTTTACGTGTTGATTCGGATATCACTCATTTTATATTAATTTCAGGATAGGCTTAACATCATTATAAGCACATGGATTCAACAAGGATTTGTCCCATCTCCTGAAGAGGTGAGTAAACAGGAGGGTATTGGCTTATCTTGGAGCAGAGGTAATTTTTAACTTAAATTTTGCCGTAACAAGGCCTTATTGCTTGGTTTATCGCTACATTTTTAGTAAAGGAACATTCTTAATCAGCTTTAATCAGGCAGAGAGCCATGGTCAATCAGAATTGGTTGCTTAAATCCTAGACGTTGCACAGCAAAGCTATCTGTGATGACGATGCAATCTTTGAATAGTGAAGACTTATATTTCTTGAG-CCCAGAGAGTTTGACTAGTGAACTGAAAAGGAACCAGGAGGTATGTATAGCCAAAAAGTAAAAGAGAGTTTTAATCAGGGACAGGCAAGCTGTTACTCTTCTAAATGTATTTCTTAAGTAGTTCTCTTGTTTTGCTATTACAGTATGGTGTCCTACT</genome_strand>
        <mrna_strand>TGCAATTGCTGATAACCTAGGCGAGGTTTCTGCAAAAGGACAG..................................................................................ATTCAAACAGTCTGCTTTGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAG....................................................................................................................................................................................................................................................................................................................................................ATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAG..................................................................................................................................................................................................................GATAGGCTTAACATCATTATAAGCACATGGATTCAACAAGGATTTGTCCCATCTCCTGAAGAGGTGAGTAAACAGGAGGGTATTGGCTTATCTTGGAGCAGAGGTAATTTTTAACTTAAATTTTGCCGTAACAAGGCCTTATTGCTTGGTTTATCGCTACATTTTTAGTAAAGGAACATTCTTAATCAGCTTTAATCAGGCAGAGAGCCATGGTCAATCAGAATTGGTTGCTTAAATCCTAGACGTTGCACAGCAAAGCTATCTGTGATGACGATGCAATCTTTGAATAGTGAAGACTTATATTTCTTGAGCCCCAGAGAGTTTGACTAGTGAACTGAAAAGGAACCAGGAG.......................................................................................................TATGGTGTCCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E378679" ref_strand="+" ref_description="SGN-E378679 	[TUS-24-D11]">
      <seq>gcaattgctgataacctaggcgagctttctgcaaaaggacagattcaaacagtctgctttgataatcttggtcttacacttgctgcaaccctgaacatactgtctgctaataatccaagattgcaggctggtctaccatttgtgatgtaccctgtcttctctgtgcttgacctttttggtatttatcaaggactaaagcatgtgcatctgcagacattaactaaggataggcttaacatcattataagcacatggattcaacaaggatttgtcccatctcctgaagaggtgagtaaacaggagggtattggcttatcttggagcagaggtaatttttaacttaaattttgccgtaacaaggccttattgcttggtttatcgctacatttttagtaaaggaacattcttaatcagctttaatcaggcagagagccatggtcaatcagaattggttgcttaaatcctagacgttgcacagcaaagctatctgtgatgacgatgcaatctttgaatagtgaagacttatatttcttgagcccagagagtttgactagtgaactgaaaaggaaccaggagtatggtgtcctactttctctgcgggaaggggcagaaactacagatgtgatcaggggcatattgcatgcaagttatgtccgcaagggtatagaagcttgtggtagttctagtgcagttctcaagcaatggtttaacctggttgaagatggcaagaggttaacagaacaaaacttgagtttcttgtatgagcaaatgttgtctttagggtgggcatgtaagaatattctgttgagcacgcaggagcaagcccgctatagtttcatagctgactgagcatatatctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="64000" stop="66401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64300" g_stop="64341" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64342" i_stop="64423" i_length="82">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64424" g_stop="64500" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="119" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64501" i_stop="64840" i_length="340">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.630" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64841" g_stop="64946" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="225" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64947" i_stop="65156" i_length="210">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65157" g_stop="65507" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="576" r_length="351" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65508" i_stop="65610" i_length="103">
            <donor d_prob="0.099" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65611" g_stop="65676" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="642" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="65677" i_stop="65882" i_length="206">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="65883" g_stop="66101" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="861" r_length="219" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E378679" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E378679" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64300" e_stop="64341"/>
          <exon e_start="64424" e_stop="64500"/>
          <exon e_start="64841" e_stop="64946"/>
          <exon e_start="65157" e_stop="65507"/>
          <exon e_start="65611" e_stop="65676"/>
          <exon e_start="65883" e_stop="66101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATTGCTGATAACCTAGGCGAGGTTTCTGCAAAAGGACAGGTTCTCTACAATATTTCATCATGTCATGCTCGATTCTAATTAGTTTCACTCTTCCAATCTGACTGTTGGTTTGTGTTTTTAGATTCAAACAGTCTGCTTTGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAGGTTTGTTTGTTTTCCAACTTGAATTTCTGAAGTATCACTGTCAGCTTTATTTATGTTTTGAAATTATATAGAGATTCTTTGCATTTGCCTCTCTGAACCTATCCATTTGGTCTATCTTTTTGTGCTTGAAGTGGAACAGTTTATATCTACACAACATGGGTCTTACTATTTCCTTTTCACACTGTAATATGAGAAGTGAAAATGTGATTTGTATCTTCCACCATTTCCTTATACAATAAGATGGAATAAGATCCTAAAAGCAAGAATTGGTTGACACATTTTTGTGCTGCTTCTGGTTATCCCTGTAATGTAGATTTCTGACTTCTGAATGATATAAAAGATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAGGTTGGCCCTCGTTCTCTGTGCTGAAAGCATTAGTGTTCAAGTTGAATTATACTTCCTTTTTTTGGCTACTAAACTTAGGTTATATTTTCTTCAAGGAGAAGAAATATGTGATATGAGTTATGACATGATCTATTTAACAGTCTTTATTGAGTGAACATTAATCATCTTTACGTGTTGATTCGGATATCACTCATTTTATATTAATTTCAGGATAGGCTTAACATCATTATAAGCACATGGATTCAACAAGGATTTGTCCCATCTCCTGAAGAGGTGAGTAAACAGGAGGGTATTGGCTTATCTTGGAGCAGAGGTAATTTTTAACTTAAATTTTGCCGTAACAAGGCCTTATTGCTTGGTTTATCGCTACATTTTTAGTAAAGGAACATTCTTAATCAGCTTTAATCAGGCAGAGAGCCATGGTCAATCAGAATTGGTTGCTTAAATCCTAGACGTTGCACAGCAAAGCTATCTGTGATGACGATGCAATCTTTGAATAGTGAAGACTTATATTTCTTGAGCCCAGAGAGTTTGACTAGTGAACTGAAAAGGAACCAGGAGGTATGTATAGCCAAAAAGTAAAAGAGAGTTTTAATCAGGGACAGGCAAGCTGTTACTCTTCTAAATGTATTTCTTAAGTAGTTCTCTTGTTTTGCTATTACAGTATGGTGTCCTACTTTCTCTGCGGGAAGGGGCAGAAACTACAGATGTGATCAGGGGCATATTGCATGTAAGATGTTGTATCCATCCCTTCTCATAGTAATGGCTTTATCAAGTAGTAATTTGGAACTAATGATTTTCCTTTGCAAATGAACTAAGGGATACGGGTAAACCAATAGTTTTACTTCAAATAACTTATCTAGTAATGCTTGTTTCTTGCTGAGCTCTTTATAATGGTTAGTATTCTTTATAATAAGCTATTCTGGTGGTTGACAGGCAAGTTATGTCCGCAAGGGTATAGAAGCTTGTGGTAGTTCTAGTGCAGTTCTCAAGCAATGGTTTAACCTGGTTGAAGATGGCAAGAGGTTAACAGAACAAAACTTGAGTTTCTTGTATGAGCAAATGTTGTCTTTAGGGTGGGCATGTAAGAATATTCTGTTGAGCACGCAGGAGCAAGCCCGCTATAGTTTCATAGCTGACTGAGCATATATCTAC</genome_strand>
        <mrna_strand>GCAATTGCTGATAACCTAGGCGAGCTTTCTGCAAAAGGACAG..................................................................................ATTCAAACAGTCTGCTTTGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAG....................................................................................................................................................................................................................................................................................................................................................ATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAG..................................................................................................................................................................................................................GATAGGCTTAACATCATTATAAGCACATGGATTCAACAAGGATTTGTCCCATCTCCTGAAGAGGTGAGTAAACAGGAGGGTATTGGCTTATCTTGGAGCAGAGGTAATTTTTAACTTAAATTTTGCCGTAACAAGGCCTTATTGCTTGGTTTATCGCTACATTTTTAGTAAAGGAACATTCTTAATCAGCTTTAATCAGGCAGAGAGCCATGGTCAATCAGAATTGGTTGCTTAAATCCTAGACGTTGCACAGCAAAGCTATCTGTGATGACGATGCAATCTTTGAATAGTGAAGACTTATATTTCTTGAGCCCAGAGAGTTTGACTAGTGAACTGAAAAGGAACCAGGAG.......................................................................................................TATGGTGTCCTACTTTCTCTGCGGGAAGGGGCAGAAACTACAGATGTGATCAGGGGCATATTGCAT..............................................................................................................................................................................................................GCAAGTTATGTCCGCAAGGGTATAGAAGCTTGTGGTAGTTCTAGTGCAGTTCTCAAGCAATGGTTTAACCTGGTTGAAGATGGCAAGAGGTTAACAGAACAAAACTTGAGTTTCTTGTATGAGCAAATGTTGTCTTTAGGGTGGGCATGTAAGAATATTCTGTTGAGCACGCAGGAGCAAGCCCGCTATAGTTTCATAGCTGACTGAGCATATATCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E247653" ref_strand="+" ref_description="SGN-E247653 	[cLEF-42-C1]">
      <seq>gcaattgctgataacctatgcgaggtttctgcaaaaggacagattcaaacagtctgctgggataatcttggtcttacacttgctgcaaccctgaacatactgtctgctaataatccaagattgcaggctggtctaccatttgtgatgtaccctgtcttctctgtgcttgacctttttggtatttatcaaggactaaagcatgtgcatctgcagacattaactaaggataggcttaacatcattataagcacatggattcaacaaggatttgtcccatctcctgaagaggtgagtaaacaggagggtattggcttatcttggagcagaggtaatttttaacttaaattttgccgtaacaaggccttattgcttggtttatcgctacatttttagtaaaggaacattcttaatcagctttaatcaggcagagagccatggtcaatcagaattggttgcttaaatcctagacgttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="64000" stop="65706"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64300" g_stop="64341" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="42" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64342" i_stop="64423" i_length="82">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64424" g_stop="64500" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="119" r_length="77" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64501" i_stop="64840" i_length="340">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.630" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64841" g_stop="64946" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="225" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64947" i_stop="65156" i_length="210">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65157" g_stop="65406" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="475" r_length="250" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E247653" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64300" e_stop="64341"/>
          <exon e_start="64424" e_stop="64500"/>
          <exon e_start="64841" e_stop="64946"/>
          <exon e_start="65157" e_stop="65406"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATTGCTGATAACCTAGGCGAGGTTTCTGCAAAAGGACAGGTTCTCTACAATATTTCATCATGTCATGCTCGATTCTAATTAGTTTCACTCTTCCAATCTGACTGTTGGTTTGTGTTTTTAGATTCAAACAGTCTGCTTTGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAGGTTTGTTTGTTTTCCAACTTGAATTTCTGAAGTATCACTGTCAGCTTTATTTATGTTTTGAAATTATATAGAGATTCTTTGCATTTGCCTCTCTGAACCTATCCATTTGGTCTATCTTTTTGTGCTTGAAGTGGAACAGTTTATATCTACACAACATGGGTCTTACTATTTCCTTTTCACACTGTAATATGAGAAGTGAAAATGTGATTTGTATCTTCCACCATTTCCTTATACAATAAGATGGAATAAGATCCTAAAAGCAAGAATTGGTTGACACATTTTTGTGCTGCTTCTGGTTATCCCTGTAATGTAGATTTCTGACTTCTGAATGATATAAAAGATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAGGTTGGCCCTCGTTCTCTGTGCTGAAAGCATTAGTGTTCAAGTTGAATTATACTTCCTTTTTTTGGCTACTAAACTTAGGTTATATTTTCTTCAAGGAGAAGAAATATGTGATATGAGTTATGACATGATCTATTTAACAGTCTTTATTGAGTGAACATTAATCATCTTTACGTGTTGATTCGGATATCACTCATTTTATATTAATTTCAGGATAGGCTTAACATCATTATAAGCACATGGATTCAACAAGGATTTGTCCCATCTCCTGAAGAGGTGAGTAAACAGGAGGGTATTGGCTTATCTTGGAGCAGAGGTAATTTTTAACTTAAATTTTGCCGTAACAAGGCCTTATTGCTTGGTTTATCGCTACATTTTTAGTAAAGGAACATTCTTAATCAGCTTTAATCAGGCAGAGAGCCATGGTCAATCAGAATTGGTTGCTTAAATCCTAGACGTTGCA</genome_strand>
        <mrna_strand>GCAATTGCTGATAACCTATGCGAGGTTTCTGCAAAAGGACAG..................................................................................ATTCAAACAGTCTGCTGGGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAG....................................................................................................................................................................................................................................................................................................................................................ATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAG..................................................................................................................................................................................................................GATAGGCTTAACATCATTATAAGCACATGGATTCAACAAGGATTTGTCCCATCTCCTGAAGAGGTGAGTAAACAGGAGGGTATTGGCTTATCTTGGAGCAGAGGTAATTTTTAACTTAAATTTTGCCGTAACAAGGCCTTATTGCTTGGTTTATCGCTACATTTTTAGTAAAGGAACATTCTTAATCAGCTTTAATCAGGCAGAGAGCCATGGTCAATCAGAATTGGTTGCTTAAATCCTAGACGTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E422514" ref_strand="-" ref_description="SGN-E422514 	[STM-40-F17]">
      <seq>tcaggggcatattgcatgcaagttacgtccgcaagggtatagaaacttgtggtagttctagtgcagttctcaagcaatggttttacctggttaaagatggcaagagattaacagtacaaaacttgagtttcttgtatgagcaaatgttgtctttgggttgggcatgtaagaatattctgttgagcacgcaggagcaagcccgctatagttttataactgactaagcatatatctactttcttccggttatggttgatttgctaagaggaaagcgaataagggtcaaagaaaccaagacaaggagattttgtctttatgtccttgtatttttatgtaatcaaaactttgggcatcgaaaagagatgccttatacatctgtgagtactggctgcataaagagagcagcaagtgttgtacaaattttgagtagctttcttgtcttgtagattaaccgattggggttaaaactgttatccaacagactattgtttcctcattcatccatttaactaaaaggttttgtatcaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="65360" stop="66677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65660" g_stop="65676" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65677" i_stop="65882" i_length="206">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65883" g_stop="66392" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="521" r_length="504" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="527" polyA_stop="538"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E422514" ref_strand="-">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E422514" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65660" e_stop="65676"/>
          <exon e_start="65883" e_stop="66392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGGGGCATATTGCATGTAAGATGTTGTATCCATCCCTTCTCATAGTAATGGCTTTATCAAGTAGTAATTTGGAACTAATGATTTTCCTTTGCAAATGAACTAAGGGATACGGGTAAACCAATAGTTTTACTTCAAATAACTTATCTAGTAATGCTTGTTTCTTGCTGAGCTCTTTATAATGGTTAGTATTCTTTATAATAAGCTATTCTGGTGGTTGACAGGCAAGTTATGTCCGCAAGGGTATAGAAGCTTGTGGTAGTTCTAGTGCAGTTCTCAAGCAATGGTTTAACCTGGTTGAAGATGGCAAGAGGTTAACAGAACAAAACTTGAGTTTCTTGTATGAGCAAATGTTGTCTTTAGGGTGGGCATGTAAGAATATTCTGTTGAGCACGCAGGAGCAAGCCCGCTATAGTTTCATAGCTGACTGAGCATATATCTACTTTCTTCCAGTTATGGTTGATTCGCAAAGATGAAAGTGAATAAAGGGTCAAAGAAAACCAAGACTAGGAGATTTTGTCTTTATATCCTTGTATTTGTATATAATCAAAATTTTGGGTATCAAAAAGAGATGCCTTATACATATCCGTGAGTACTGGCTCCACAAAGAGAGCAGCAAGTGTTGTACAAATTTTGAGTAGCTTTATCTGTCTTGTAGATTAACCGATTGAGGTTAAAACTGTTATCCAACTGACTATTGTTTCCTCATTCATCCATTTTGTCCGAAAGATTTT</genome_strand>
        <mrna_strand>TCAGGGGCATATTGCAT..............................................................................................................................................................................................................GCAAGTTACGTCCGCAAGGGTATAGAAACTTGTGGTAGTTCTAGTGCAGTTCTCAAGCAATGGTTTTACCTGGTTAAAGATGGCAAGAGATTAACAGTACAAAACTTGAGTTTCTTGTATGAGCAAATGTTGTCTTTGGGTTGGGCATGTAAGAATATTCTGTTGAGCACGCAGGAGCAAGCCCGCTATAGTTTTATAACTGACTAAGCATATATCTACTTTCTTCCGGTTATGGTTGATTTGCTAAGAGGAAAGCGAAT-AAGGGTCAAAG-AAACCAAGACAAGGAGATTTTGTCTTTATGTCCTTGTATTTTTATGTAATCAAAACTTTGGGCATCGAAAAGAGATGCCTTATAC--ATCTGTGAGTACTGGCTGCATAAAGAGAGCAGCAAGTGTTGTACAAATTTTGAGTAGCTTTCT-TGTCTTGTAGATTAACCGATTGGGGTTAAAACTGTTATCCAACAGACTATTGTTTCCTCATTCATCCA-TTTAACTAAAAGGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E436222" ref_strand="-" ref_description="SGN-E436222 	[STM-62-P3]">
      <seq>aaagatggcaagagattaccagtacaaaacttgagtttcttgtatgagcaaatgttgtctttgggttgggcatgtaagaatattctgttgagcacgcaggagcaagcccgctatagttttataactgactaagcatatatctactttcttccggttatggttgatttgctaagaggaaagcgaataagggtcaaagaaaccaagacaaggagattttgtctttatgtccttgtatttttatgtaatcaaaactttgggcatcgaaaagagatgccttatacatctgtgagtactggctgcataaagagagcagcaagtgttgtacaaattttgagtagctttcttgtcttgtagattaaccgattggggttaaaactgttatccaacagactattgtttcctcattcatccattttgtctaaaaggttttgtaatcatctcatctaagagcttgataaacattttatttatgaagaatatacatgctccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="65659" stop="66738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65958" g_stop="66435" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="490" polyA_stop="499"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E436222" ref_strand="-">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E436222" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="65958" e_stop="66435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGGCAAGAGGTTAACAGAACAAAACTTGAGTTTCTTGTATGAGCAAATGTTGTCTTTAGGGTGGGCATGTAAGAATATTCTGTTGAGCACGCAGGAGCAAGCCCGCTATAGTTTCATAGCTGACTGAGCATATATCTACTTTCTTCCAGTTATGGTTGATTCGCAAAGATGAAAGTGAATAAAGGGTCAAAGAAAACCAAGACTAGGAGATTTTGTCTTTATATCCTTGTATTTGTATATAATCAAAATTTTGGGTATCAAAAAGAGATGCCTTATACATATCCGTGAGTACTGGCTCCACAAAGAGAGCAGCAAGTGTTGTACAAATTTTGAGTAGCTTTATCTGTCTTGTAGATTAACCGATTGAGGTTAAAACTGTTATCCAACTGACTATTGTTTCCTCATTCATCCATTTTGTCCGAAAGATTTTGTAATCATCTCATCTAAAAGCTTGATAAACATTTTATTTATGA</genome_strand>
        <mrna_strand>AAAGATGGCAAGAGATTACCAGTACAAAACTTGAGTTTCTTGTATGAGCAAATGTTGTCTTTGGGTTGGGCATGTAAGAATATTCTGTTGAGCACGCAGGAGCAAGCCCGCTATAGTTTTATAACTGACTAAGCATATATCTACTTTCTTCCGGTTATGGTTGATTTGCTAAGAGGAAAGCGAAT-AAGGGTCAAAG-AAACCAAGACAAGGAGATTTTGTCTTTATGTCCTTGTATTTTTATGTAATCAAAACTTTGGGCATCGAAAAGAGATGCCTTATAC--ATCTGTGAGTACTGGCTGCATAAAGAGAGCAGCAAGTGTTGTACAAATTTTGAGTAGCTTTCT-TGTCTTGTAGATTAACCGATTGGGGTTAAAACTGTTATCCAACAGACTATTGTTTCCTCATTCATCCATTTTGTCTAAAAGGTTTTGTAATCATCTCATCTAAGAGCTTGATAAACATTTTATTTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E416037" ref_strand="+" ref_description="SGN-E416037 	[STM-22-K2]">
      <seq>ttttttttagaggaatatcatgatctattagaagcaattcataantcttgtgcaaccacttaatgattcaacacttgacaatgagactgttgcagtataaacagctcagcagttcctacccacaagtatcacaataaaattgcaatataccatcaaaaagttgttacattgttttgttttgttttgtttttttggtttacccatcagtgtccaaaaccagctcgccatttaacacctctaccagcatatttcccattatagcaagcaataccacattgacatcagcccgagctaaaatcttcaaaatcatcacctatcatttggtacgtagcaagccagatgtagataggagccgtaatgcttgactggaattgttcagaacagctgatgatcttgacacctgcatcttgcgtttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="66606" stop="67599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66914" g_stop="67299" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="418" r_length="392" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E416037" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66914" e_stop="67299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAGAAGCAATTCATAA-TCTTGTGCAGCCACTTAATGATTCAACACTTGACTGAGATGAGACTGTTGCAGTGTAAACAGTTCAGCAGTTCCTACCCACAAGTAT--CAATAAAATTGCAATATACCATCAAAAAGTTGTTACA----A-TGTTTTGTTTTGTTTTTTTGGTTTACCCATCAGTGTCCAAAACCAGCTCGCCATTTAACACCTCTACCAGCATA-TTCTCATTACAGCAAGCAATACAGCATTGACATCA-CTCGGGCTAAAATCTTCAAAATCATCACCTATCATTTCGTACGTAGCAAGCCAGATGTAGATAGAAGGCGTAATGCTTGACTGGAATTGTTCAGAACAGCTGATGATCTTGACACCTGCATCTTACGTTTCTT</genome_strand>
        <mrna_strand>A-TTAGAAGCAATTCATAANTCTTGTGCAACCACTTAATGATTCAACACTTGAC--A-ATGAGACTGTTGCAGTATAAACAGCTCAGCAGTTCCTACCCACAAGTATCACAATAAAATTGCAATATACCATCAAAAAGTTGTTACATTGTTTTGTTTTGTTTTGTTTTTTTGGTTTACCCATCAGTGTCCAAAACCAGCTCGCCATTTAACACCTCTACCAGCATATTTCCCATTATAGCAAGCAATACCACATTGACATCAGCCCGAGCTAAAATCTTCAAAATCATCACCTATCATTTGGTACGTAGCAAGCCAGATGTAGATAGGAGCCGTAATGCTTGACTGGAATTGTTCAGAACAGCTGATGATCTTGACACCTGCATCTTGCGTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E463572" ref_strand="+" ref_description="SGN-E463572 	[cPRO-15-G23]">
      <seq>aaacaatgaggagattacaaaagttgaaagacaacataaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgaagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaaagttttctcgtcagactcggaggaagaacatgagaagcagcctacatctaaaaagaaaagatccaagagatctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgcaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacggctcctatctacatctggcttgctacgtaccaaatgataggtgatgattttgaggattttagctcgggctgatgtcaatgtggtattgcttgctataatgggaaatattctggtagaggtgttaaatggcgagctggttttggacactgatgggtaaaccaaaaaaacaaacaatgtaacaactttttgatggtatattgcaattttattgatacttgtgggtacgaactgctgagctgtttatactgcaacagtctcattgtcaagtgttgcatcattaagtggntgcacgagattatgaatttgctctaatgatcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69397" stop="66671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69097" g_stop="69053" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="0.911"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.91"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="222" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="300" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67366" g_stop="66924" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="736" r_length="436" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E463572" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69097" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="66924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAG-TGATGTCAATGCTGTATTGCTTGCTGTAATGAG-AATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTGTGGGTAGGAACTGCTGAACTGTTTACACTGCAACAGTCTCATCTCAGTCAAGTGTTGAATCATTAAGTGGCTGCACAAGATTATGAATT</genome_strand>
        <mrna_strand>AAACAATGAGGAGATTACAAAAGTTGAAAGACAACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAGGAAGAACATGAGAAGCAGCCTACATCTAAAAAGAAAAGATCCAAGAGATCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGCAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGGCTCCTATCTACATCTGGCTTGCTACGTACCAAATGATAGGTGATGATTTTGAGGATTTTAGCTCGGGCTGATGTCAATGTGGTATTGCTTGCTATAATGGGAAATATTCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAAC-AAAC---A-A-TGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTGTGGGTACGAACTGCTGAGCTGTTTATACTGCAACAGTCTCAT-T--GTCAAGTGTTGCATCATTAAGTGGNTGCACGAGATTATGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E558925" ref_strand="-" ref_description="SGN-E558925 	[18341]">
      <seq>tacagggaattcaaaacaatgaggagattacaaaagttgaaagacaacataaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgaagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaaagttttctcgtcagactcggaggaagaacatgagaagcagcctacatctaaaaagaaaagatccaagagatctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcgttcttgaagaaacgcaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacggctcctatctacatctggcttgctacgtaccaaatgataggtgatgattttgaagattttagctcgggctgatgtcaatgtggcttgctataatgggaaatatgctggtagaggtgttaaatggcgagctggttttggacactgatgagtaaacccaaaaaacaaaacaatgttacaactttttatggtatattgcaattttattgatatttgtgggtaggaactgctgagctttttataactgcaacaatctcattgtccaagtgttgaatcatttagtggttgcacaagattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69410" stop="66628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69110" g_stop="69053" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="235" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="313" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67366" g_stop="66928" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="742" r_length="429" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E558925" ref_strand="-">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558925" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="69110" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="66928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAG-TGATGTCAATGCTGTATTGCTTGCTGTAATGAG-AATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTGTGGGTAGGAACTGCTGAACTGTTTA-CACTGCAACAGTCTCATCTCAGTCAAGTGTTGAATCATTAAGTGGCTGCACAAGATTATG</genome_strand>
        <mrna_strand>TACAGGGAATTCAAAACAATGAGGAGATTACAAAAGTTGAAAGACAACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAGGAAGAACATGAGAAGCAGCCTACATCTAAAAAGAAAAGATCCAAGAGATCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCGTTCTTGAAGAAACGCAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGGCTCCTATCTACATCTGGCTTGCTACGTACCAAATGATAGGTGATGATTTTGAAGATTTTAGCTCGGGCTGATGTCAATG-TG----GCTTGCTATAATGGGAAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGAGTAAACCCAAAAAACAAAAC---A-A-TGTTACAACTTTTT-ATGGTATATTGCAATTTTATTGATATTTGTGGGTAGGAACTGCTGAGCTTTTTATAACTGCAACAATCTCAT-T-GTCCAAGTGTTGAATCATTTAGTGGTTGCACAAGATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E549670" ref_strand="-" ref_description="SGN-E549670 	[TUS-6-O13]">
      <seq>acaaaatgatgaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgaaaagaaagttttctcgtcagactcggaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgtaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacgccttctatctacatctggcttgctacgtacgaaatgataggtgatgattttgaagattttagcccgagtgatgtcaatgctgtattgcttgctgtaatgagaatatgctggtagaggtgttaaatggcgagctggttttggacactgatgggtaaaccaaaaaaacaaaacaaaacattgtaacaactttttgatggtatattgcaattttattgatacttgtgggtaggaactgctgaactgtttacactgcaacagtctcatctcagtcagagtgttgaatcattaagttctgcacaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="68032" stop="66645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67732" g_stop="67619" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="192" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67366" g_stop="66934" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="625" r_length="433" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E549670" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549670" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="67732" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="66934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTGTGGGTAGGAACTGCTGAACTGTTTACACTGCAACAGTCTCATCTCAGTCA-AGTGTTGAATCATTAAGTGGCTGCACAAG</genome_strand>
        <mrna_strand>ACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTGTGGGTAGGAACTGCTGAACTGTTTACACTGCAACAGTCTCATCTCAGTCAGAGTGTTGAATCATTAAGT-TCTGCACAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E549712" ref_strand="+" ref_description="SGN-E549712 	[TUS-6-O13]">
      <seq>gggcagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattagaaaagttgaaaaagaacacaaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctaaacaaaatgatgaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgaaaagaaagttttctcgtcagactcggaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgtaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacgccttctatctacatctggcttgctacgtacgaaatgataggtgatgattttgaagattttagcccgagtgatgtcaatgctgtattgcttgctgtaatgagaatatgctggtagaggtgttaaatggcgagctggttttggacactgatgggnntaaccaaaaaacaaaacaaaacattgtaacaactttttgatggtatattgcnattttattgatacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69553" stop="66713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69253" g_stop="69199" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="108" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="285" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="363" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67013" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="717" r_length="354" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E549712" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549712" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69253" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTG</genome_strand>
        <mrna_strand>GGGCAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGNNTAACCAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCNATTTTATTGATACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E278202" ref_strand="-" ref_description="SGN-E278202 	[cLER-9-L16]">
      <seq>tgggctcaaaagttacctccacgacctaaacaaaatgatcaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcatgcagctcgtgaaaagaaagttttctcgtcagactcggaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgtaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacgccttctatctacatctggcttgctacgtacgaaatgataggtgatgattttgaagattttagcccgagtgatgtcaatgctgtattgcttgctgtaatgagaatatgctggtagaggtgttaaatggcgagctggttttggacactgatgggtaaaccaaaaaaacaaaacagaacattgtaacaactttttgatggtatattgcaattttattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="68061" stop="66719"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67761" g_stop="67619" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="221" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67366" g_stop="67018" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="570" r_length="349" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E278202" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278202" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="67761" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGAT</genome_strand>
        <mrna_strand>TGGGCTCAAAAGTTACCTCCACGACCTAAACAAAATGATCAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCATGCAGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAGAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E597246" ref_strand="-" ref_description="SGN-E597246 	[40745]">
      <seq>ctgccaaagtgcgatacattgttcaagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattacaaaagttgaaagacaacataaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgaagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaaagttttctcgtcagactcggaggaagaacatgagaagcagcctacatctaaaaagaaaagatccaagagatctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcgttcttgaagaaacgcaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacggctcctatctacatctggcttgctacgtaccaaatgataggtgatgattttgaagattttagctcgggctgatgtcaatgtggcttgctataatgggaaatatgctggtagaggtgttaaatggcgagctggttttggacactgatgagtaaacccaaaaaacaaaacaatgttacaactttttatggtatattgcaattttattgaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69589" stop="66717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69289" g_stop="69199" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="144" r_length="53" r_score="0.925"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="321" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="399" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67020" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="737" r_length="338" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="738" polyA_stop="755"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E597246" ref_strand="-">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E597246" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="69289" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAG-TGATGTCAATGCTGTATTGCTTGCTGTAATGAG-AATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTG</genome_strand>
        <mrna_strand>CTGCCAAAGTGCGATACATTGTTCAAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTACAAAAGTTGAAAGACAACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAGGAAGAACATGAGAAGCAGCCTACATCTAAAAAGAAAAGATCCAAGAGATCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCGTTCTTGAAGAAACGCAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGGCTCCTATCTACATCTGGCTTGCTACGTACCAAATGATAGGTGATGATTTTGAAGATTTTAGCTCGGGCTGATGTCAATG-TG----GCTTGCTATAATGGGAAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGAGTAAACCCAAAAAACAAAAC---A-A-TGTTACAACTTTTT-ATGGTATATTGCAATTTTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E579846" ref_strand="+" ref_description="SGN-E579846 	[86979]">
      <seq>cttccgtacaggaattcaaaacaatgaggagattacaaaagttgaaagactacataaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgaagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaaagttttctcgtcagactcggaggaagaacatgagaagcagcttacatctaaaaagaaaagatccaagagatctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgcaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacggctcctatctacatctggcttgctacgtaccaaatgataggtgatgattttgaagattttagctcgggctgatgtcaatgtggtatggcttgctataatgggaacatatgctggtagaggtgtgaaatggcgagctgggtttggacactgatgggtaaaccaaaaaaacaatgtacaacttgtaacggcttattgatggtatattgcaaatttattgataaaaaactcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69416" stop="66717"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69209" g_stop="69199" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.881" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="63" r_length="52" r_score="0.887"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="240" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="318" r_length="78" r_score="0.949"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67020" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="667" r_length="349" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E579846" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E579846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69209" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAG-TGATGTCAATGCTGTATTGCTTGCTGTAATGAG-A-ATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTG</genome_strand>
        <mrna_strand>CTTCCGTACAG.............................................................................................G-AATTCAAAACAATGAGGAGATTACAAAAGTTGAAAGACTACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAGGAAGAACATGAGAAGCAGCTTACATCTAAAAAGAAAAGATCCAAGAGATCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGCAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGGCTCCTATCTACATCTGGCTTGCTACGTACCAAATGATAGGTGATGATTTTGAAGATTTTAGCTCGGGCTGATGTCAATGTGGTATGGCTTGCTATAATGGGAACATATGCTGGTAGAGGTGTGAAATGGCGAGCTGGGTTTGGACACTGATGGGTAAACCAAAAAAACAATGTACAAC-TTGTAACGGCTTATTGATGGTATATTGCAAATTTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E410102" ref_strand="+" ref_description="SGN-E410102 	[PPI-16-E15]">
      <seq>cctaaaaccctctgccacagtgcgatactttgctcaagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattacaaaagttgaaagacaacataaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgaagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaaagttttctcgtcagactcggaggaagaacatgagaagcagcctacatctaaaaagaaaagatccaagagatctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgcaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacggctcctatctacatctggcttgctacgtaccaaatgataggtgatgattttgaagattttagctcgggctgatgtcaatgtggtattgcttgctataatgggaaatatgctgggtagaggtgttaaatggcgagctgtttttggacactgatggggtaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69600" stop="66780"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69300" g_stop="69199" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="155" r_length="53" r_score="0.925"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="332" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="410" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67084" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="696" r_length="286" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E410102" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E410102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69300" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAG-TGATGTCAATGCTGTATTGCTTGCTGTAATGAG-AATATGCT-GGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGG</genome_strand>
        <mrna_strand>CCTAAAACCCTCTGCCACAGTGCGATACTTTGCTCAAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTACAAAAGTTGAAAGACAACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAGGAAGAACATGAGAAGCAGCCTACATCTAAAAAGAAAAGATCCAAGAGATCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGCAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGGCTCCTATCTACATCTGGCTTGCTACGTACCAAATGATAGGTGATGATTTTGAAGATTTTAGCTCGGGCTGATGTCAATGTGGTATTGCTTGCTATAATGGGAAATATGCTGGGTAGAGGTGTTAAATGGCGAGCTGTTTTTGGACACTGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E464358" ref_strand="+" ref_description="SGN-E464358 	[cPRO-17-D12]">
      <seq>ctaaaaccctctgccacagtgcgatactttgctcaagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattacaaaagttgaaagacaacataaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgaagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaaagttttctcgtcagactcggaggaagaacatgagaagcagcctacatctaaaaagaaaagatccaagagatctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgcaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacggctcctatctacatctggcttgctacgtaccaaatgataggtgatgattttgaagattttagctcgggctgatgtcaatgtggtattgcttgctataatgggaaatatgctggtagaggtgttaaatggcgagctgtttttggacactgatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69599" stop="66784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69299" g_stop="69199" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="154" r_length="53" r_score="0.925"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="331" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="409" r_length="78" r_score="0.962"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67084" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="694" r_length="285" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E464358" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69299" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAG-TGATGTCAATGCTGTATTGCTTGCTGTAATGAG-AATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGG</genome_strand>
        <mrna_strand>CTAAAACCCTCTGCCACAGTGCGATACTTTGCTCAAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTACAAAAGTTGAAAGACAACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAGGAAGAACATGAGAAGCAGCCTACATCTAAAAAGAAAAGATCCAAGAGATCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGCAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGGCTCCTATCTACATCTGGCTTGCTACGTACCAAATGATAGGTGATGATTTTGAAGATTTTAGCTCGGGCTGATGTCAATGTGGTATTGCTTGCTATAATGGGAAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGTTTTTGGACACTGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E231427" ref_strand="+" ref_description="SGN-E231427 	[cLED-4-E17]">
      <seq>ggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattagaaaagttgaaaaagaacacaaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctaaacaaaatgatgaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgaaaagaaagttttctcgtcagactcggaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgtaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattacgccttctatctacatctggcttgctacgtacgaaatgataggtgatgattttgaagattttagcccgagtgatgtcaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69552" stop="66854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69252" g_stop="69199" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="107" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="284" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="362" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67154" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="575" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E231427" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69252" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCT</genome_strand>
        <mrna_strand>GGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E249939" ref_strand="+" ref_description="SGN-E249939 	[cLEG-4-G5]">
      <seq>ttacttgtgctccaaaaccctagccctaaaaccctctgccaaagtgagacactttgctcgagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattagaaaagttgaaaaagaacacaaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctaaacaaaatgatgaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgaaaagaaagttttctcgtcagactcggaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgtaagatgcangtgtcaagatcattagctgttctgaacaattccagtcaagcattacgccttctatctacatctggctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69624" stop="66914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69324" g_stop="69199" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="179" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="356" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="434" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67214" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="587" r_length="153" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E249939" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69324" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTTGTGCTCCAAAACCCTAGCCCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTT</genome_strand>
        <mrna_strand>TTACTTGTGCTCCAAAACCCTAGCCCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCANGTGTCAAGATCATTAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E246795" ref_strand="+" ref_description="SGN-E246795 	[cLEF-41-C5]">
      <seq>caaaaattatttcacaagtacactatcctttacttgtgctccaaaaccctagccctaaaaccctctgccaaagtgagacactttgctcgagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattagaaaagttgaaaaagaacacaaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctaaacaaaatgatgaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgaaaagaaagttttctcgtcagactcggaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgtaagatgcaggtgtcaagatcatcagctgttctgaacaattccagtcaagcattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69653" stop="66936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69353" g_stop="69199" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="208" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="385" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="463" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67236" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="594" r_length="131" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E246795" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69353" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67236"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAATTATTTCACAAGTACACTATCCTTTACTTGTGCTCCAAAACCCTAGCCCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTAC</genome_strand>
        <mrna_strand>CAAAAATTATTTCACAAGTACACTATCCTTTACTTGTGCTCCAAAACCCTAGCCCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E416036" ref_strand="+" ref_description="SGN-E416036 	[STM-22-K2]">
      <seq>cctagccctaaaaccctctgccaaagtgcgatactttgctcaagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattgcaaaagttgaaagacaacataaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgaagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaaagttttctcgtcagactcggaggaagaacatgagaagcagcttacatctaaaaagaaaagatccaagagatctgggtctggaccagttattttgaaggatctaccacctcctncgtgcttagagagctcactggcattcttgaagaaacgcaagatgcaggtgtcaagatcatcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69606" stop="66964"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69306" g_stop="69199" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="161" r_length="53" r_score="0.906"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="338" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="416" r_length="78" r_score="0.949"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67264" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="519" r_length="103" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E416036" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E416036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69306" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAGCCCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCT</genome_strand>
        <mrna_strand>CCTAGCCCTAAAACCCTCTGCCAAAGTGCGATACTTTGCTCAAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTGCAAAAGTTGAAAGACAACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAGGAAGAACATGAGAAGCAGCTTACATCTAAAAAGAAAAGATCCAAGAGATCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTNCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGCAAGATGCAGGTGTCAAGATCATCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E337924" ref_strand="+" ref_description="SGN-E337924 	[cTOE-14-H18]">
      <seq>tctgccaaagtgagacactttgctcgagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattagaaaagttgaaaaagaacacaaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctaaacaaaatgatgaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgaaaagaaagttttctcgtcagactcggaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttgaaggatctaccacctcctccgtgcttagagagctcactggcattcttgaagaaacgtaagatgcaggtgtcaagatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69590" stop="66970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69290" g_stop="69199" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="145" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="322" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="400" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67270" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="497" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E337924" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69290" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCA</genome_strand>
        <mrna_strand>TCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E338468" ref_strand="+" ref_description="SGN-E338468 	[cTOE-15-F17]">
      <seq>ttgctcgagcgatatgtcgggaagaggagaagatcgtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattagaaaagttgaaaaagaacacaaggctagagttgttcgggaaaggaaggaacgtcgtatacaatgggctcataagttaactccacgacctaaacaaaatgatgaaagcattggagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgccgctcgtgaaaagaaagttttctcgtcagactctgaagaagaacatgagaagcagcctacatctaaaaacaaaagatccaagagctctgggtctggaccagttattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69571" stop="67048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69271" g_stop="69199" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="126" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="303" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.912" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67448" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="381" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67366" g_stop="67348" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="400" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E338468" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E338468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69271" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67448"/>
          <exon e_start="67366" e_stop="67348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGGGTGAGCATCGTGCTCTGTTCTTGTTTAATTAATATAATATTGATAACTCGCTTGTATTTACTCACTGTATGTTTGCCACAGGTCTGGACCAGTTATTTTG</genome_strand>
        <mrna_strand>TTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATCGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTATACAATGGGCTCATAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGGAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCCGCTCGTGAAAA.............................................................................................GAAAGTTTTCTCGTCAGACTCTGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG.................................................................................GTCTGGACCAGTTATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E236305" ref_strand="+" ref_description="SGN-E236305 	[cLED-20-F17]">
      <seq>agaagatagtgattccgatgctccggaagaactaacttccgtacagggaattcaaaacaatgaggagattagaaaagttgaaaaagaacacaaggctagagttgttcgggaaaggaaggaacgtcgtagacaatgggctcaaaagttaactccacgacctaaacaaaatgatgaaagcattgaagacacaaaagaacctgaagatgcccaagagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgaaaagaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69544" stop="67313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69244" g_stop="69199" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.881" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="99" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="276" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67525" g_stop="67520" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="282" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E236305" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>282</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69244" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
          <exon e_start="67525" e_stop="67520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAAGTAAGTTATTTGTTGCATTTCTTGGTTTATTGGTAGTTCCGGTCTTCTCATACTCTTCCCAGTTCTTGAAAAACGGTACTCAATTGTATGCAGGAAAGT</genome_strand>
        <mrna_strand>AGAAGATAGTGATTCCGATGCTCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA.............................................................................................GAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E438167" ref_strand="+" ref_description="SGN-E438167 	[cSTA-6-K20]">
      <seq>cctagccctaaaaccctctgccaaagtgcgatactttgctcaagcgatatgtcgggaagaggagaagatagtgattccgatgcgccggaagaactaacttccgtacagggaattcaaaacaatgaggagattgcaaaagttgaaagacaacataaggctagagttgttcgggaaaggaaggaacgtcgtanacaatgggctcaaaagttaactccacgacctacacaaaatgatgaaagcattgtagacacaaaagaacctgaaaatgcccaggagtcaaaggacaatagagggatgctgcctgatgagattgtaaaaattcttgcagctcgtgagaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="69606" stop="67316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69306" g_stop="69199" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.881" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69105" g_stop="69053" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="161" r_length="53" r_score="0.906"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67795" g_stop="67619" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="338" r_length="177" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E438167" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69306" e_stop="69199"/>
          <exon e_start="69105" e_stop="69053"/>
          <exon e_start="67795" e_stop="67619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAGCCCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAGGTTTGTTTAACTCTGAAATCTCTTATCAAAATTACTGTCTTTTGCGATAGCAGATGTAGTCGAAGAAGTTGAGCTAATTGGTCTTCGTTGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAGGTATGCTCTCTTCATAATTTGATTTGATTTTTGCATACAATTTTGTTTTTATTGTTTTGTTTTGAGAGAAGTAATTGGAAGTTAAAAATTCAGCTCTTTTAAGGTTTCTGTAATGTTAGTTTAGCACTATGTTATTTATTAGTCATTAATACTTGAACTTTGTTTAGTATCCTTCTTTGTAGAGGGTGCAACTGAGCTGTCGACCCTCTGACTTAAAATCTTGTATCTTTGAGAGAGATTAGTACTGCTTTTTTGCTACGAGAATGCCTTTTTTTTATAACCATGGGCCATCTTTTTGCACACCTCCGCTTATTCTAAGAATACCTGTCACCTCCCACCAGCAAGCAGCATGTACTGGATCACTTTGTCCACCAGGGCTAGGATAGATAGGAAGAATCACTAGTGTATTTTGTCTCCGCTGAGAATTGAACCTGAGGACTCATGATTCTCAACCACTTCATTGACCACTAGACCACACCCAAGGGCTTCTGGGAGTTCACTTTTTTCTGCCAATTTTGAAATTCAACATGACATTTCATTTTTTCATACCAAGGTTAATGTGTTCGTTGGATTCTGGCATAATTGCTTAATTTATCTGGTGATCAGAATTGAATTAGTTTGATTGTTAAGTAAGCTATTTACTTTATAGCTCTTAAGGTTTGAATTGTAGAAAGTTACATTTCTGTACAAAATCTTTTTTATTTTAAAGTAAAGCTCCACCGAGATTTGAACTCCTGTTCAAAAGCATCGTGACGGGAGATAAAGGAGAAAGTTAAGAGTTTTTCGTAAATTGAGAAGTAGACAAGTATTATATCACTGTGTTGTCTTAGGCTTGGTATTCAGGTACATGTGTTTTAGTCTAGAAATATATTGTCCTTACAAACTGGTTTGCGCAGTTGGTTTGGAGGATTAAGGATACATGTTAGAGCCTAATCAGTATTAGGTTCAAGGAAATATGAAAGTCCTATTTTCCATGCAGATCCTCTTTAGTTTTTCTCAGAGCCTAATCTCGATGGTAACTTTGATTTGTTCATGGTCCTTTGATCCTGTTATTTATAACATTAAAGATGATCCATTATTGAAGTCCCAAACACTAATGTAAGCTACCTGTAAACTTTTATTCATTTGGGATATTCGTGGAAAATTCGTCATGTTTGATTTGGTGGTTTTTGCGCGGGGATTATAACCTTTAATTGCAAAACATGAGCAACTTATGGTCGTTCCATTATAAGTCATGAAATGACTGCTCTGTTGTAGAGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA</genome_strand>
        <mrna_strand>CCTAGCCCTAAAACCCTCTGCCAAAGTGCGATACTTTGCTCAAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG.............................................................................................GGAATTCAAAACAATGAGGAGATTGCAAAAGTTGAAAGACAACATAAGGCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGGAAAGGAAGGAACGTCGTANACAATGGGCTCAAAAGTTAACTCCACGACCTACACAAAATGATGAAAGCATTGTAGACACAAAAGAACCTGAAAATGCCCAGGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E227622" ref_strand="+" ref_description="SGN-E227622 	[cLEL-30-H18]">
      <seq>ctagttctctcattagcacatcagagcctccggtggattcagaaattccttaacacaaagcaatggtatatctaacacagttggtataattcttctgttggtatatccaatctgggctctggttcttcgagccgtctgatgaactatagctacaacgatcatatgtgtgttttcgtccacgaattcaatgctcaatgctgcaaagcagacctctgaataaatggatttggttttgttttaaacatttctggttatgtgattatgtacttttgacatatgaagtacttatggttgatggatttgattgtaaagttttcactcattcacgcttgcaatctatgaacttggtaaggtgacgattatttataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="70927" stop="69957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70624" g_stop="70273" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="366" polyA_stop="379"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E227622" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70624" e_stop="70273"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAATTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGATTGTAAAGTTTTCACTCATTCACGCTTGCAATCTATGAACTTGGTAAG</genome_strand>
        <mrna_strand>CTAGTTCTCTCATTAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAATTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGATTGTAAAGTTTTCACTCATTCACGCTTGCAATCTATGAACTTGGTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E227262" ref_strand="+" ref_description="SGN-E227262 	[cLEL-30-H18]">
      <seq>ctagttctctcaagagcacatcagagcctccggtggattcagaaattccttaacacaaagcaatggtatatctaacacagttggtataattcttctgttggtatatccaatctgggctctggttcttcgagccgtctgatgaactatagctacaacgatcatatgtgtgttttcgtccacgaattcaatgctcaatgctgcaaagcagacctctgaataaatggatttggttttgttttaaacatttctggttatgtgattatgtacttttgacatatgaagtacttatggttgatggatttgattgtaaagttttcactcattcacgcttgcaatctatgaacttggtaaggtgacgattatatataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="70927" stop="69957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70624" g_stop="70273" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="366" polyA_stop="379"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E227262" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70624" e_stop="70273"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAATTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGATTGTAAAGTTTTCACTCATTCACGCTTGCAATCTATGAACTTGGTAAG</genome_strand>
        <mrna_strand>CTAGTTCTCTCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAATTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGATTGTAAAGTTTTCACTCATTCACGCTTGCAATCTATGAACTTGGTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E573440" ref_strand="-" ref_description="SGN-E573440 	[32751]">
      <seq>gactggacttctagtcccatatattttcttcagtttccctgcagtgttattccacctcttcagaggagaggttgggaaatggattgctttcgttgcagtagtactcaggcttttcttcccacgacattttccagactggttggaaatgcctggttcattaatcctactcctagtggttgcacccaacatctttgcccacactctcagagacagttggattggcactgcgatatgtcttttgattggctgctatctcctccaagagcacatcagagcctccggtggattcagaaattccttcacacaaagtaatggtatatctaacacagttggtatagtccttctgttggtctatccaatctgggctctgctatttcgagtcgtttgatgaactatagctgcaacaatcatatgtgtgtttcatccacgaatttcaatgttcaatgctgcaagcagacctctgaataaatggatttggttttgtttaaacatttctggttatgtgattatgttcttttgacatataaagtacttgtggttgatggatttaagttgtaaagttttcttcacacattttacgcttgcaaactatgaacttggaaaggtgacaaaaaaacaagaaaacaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="72321" stop="70008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72021" g_stop="71959" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71958" i_stop="71825" i_length="134">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.945" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71824" g_stop="71754" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="134" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71753" i_stop="70740" i_length="1014">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70739" g_stop="70278" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="599" r_length="465" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E573440" ref_strand="-">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573440" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="72021" e_stop="71959"/>
          <exon e_start="71824" e_stop="71754"/>
          <exon e_start="70739" e_stop="70278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGGACTTCTAGTCCCATATATCTTCTTCAGTTTCCCTGCAGTGTTATTCCACTTCTTCAGGTAAACTTCTCTTGTTTGCTACTATTAAGTTTTCCTTGCTTCTTGTCATCCAAGATGTTCTCTTATCACTTGTTGCTACCTGATTCAAAGAGGTTTCTTTTCTTTGTTAATCAATTGTCGTTTTTGATCACCAGAGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAGGTATGAACATTAGCTTTTAATTTATATGATGAAAATAACCTATTGGTTATCATTTTCATTTTTGTGCAATTAAGTTCTTTTGTTTGTAATCCAAGATTCTGTTACCTTTTCCGTTAACTTTTTCTTAATATTAAAAAAAAATTAAATACAACTGGGCACACTTTCCAGCAAGTAATATGCTCCCCAATTATTACCATGACATGTCATGGTTCATGGAAGAGATATCTCTAAATTTTTCAAGCTGCATAGATATTCAACTTAAAAAGTTTCTTCGAGTATACTTATTGAAACTCGGAGCTTCACATAGTGATGAAATACTGAAGATGTTGCAGCATTGCCAACTGAGAAGTGTCACTAGGATTAGCTATTGTGATTTTGCTTTCTTCGGTAGACTCTTTTATATTTATTCTGATGGTAAAACACGATTTGCGTATAGTGATAATATCTTCACTCCCTGGAGCTCTCATGATGAACTTAATGTAGTTTGCTCCAAGAAATCTATTACACCCTTAGACTTAATAATAGATGGTGGAAAGATCTATTTACACCCTTAGACTTAATCATATATGGTGGAAAGACTAGCAAGACTATGGCCCGGTGGTTGGTGGTTGGGAAGGGCAAACGTTACTCGATGGATTAGTTAATGTGTGTGCAAGCCGGCTCGTATACTGTTCTTCTAAAAAATACACACATTGACACACACATGGTTGATGCGTGTGCAAGCTGGCTCGTATACTACCTAACACCCAGCCAGAACTGATGTGGGAGAAATAACATCCTTGCACGCCACTCTGATACCATGAACTCAACCTCAAAATCTAGATTCATGACGGATGGATTGCTCAAGACTATAAAAAGAGATCAAACACCCATCCACAACCAATGTGGGAGAATCAACACTAAATCTTAATCCTAAATTTGCCTATCTACTTAAGTTACGCTACTAATGCTTGCTCTATGGTTCTTTTATATATGCTAATCCTCCTTTATAATGCTGTTGTCCATGAAATATAGACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTTTCAGAGACAGCTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAA-TTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGA-TTGTAAAG--TT-TTCACTCA-TTCACGCTTGCAATCTATGAACTTG</genome_strand>
        <mrna_strand>GACTGGACTTCTAGTCCCATATATTTTCTTCAGTTTCCCTGCAGTGTTATTCCACCTCTTCAG......................................................................................................................................AGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTCAGGCTTTTCTTCCCACGACATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTGCACCCAACATCTTTGCCCACACTCTCAGAGACAGTTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTCACACAAAGTAATGGTATATCTAACACAGTTGGTATAGTCCTTCTGTTGGTCTATCCAATCTGGGCTCTGCTATTTCGAGTCGTTTGATGAACTATAGCTGCAACAATCATATGTGTG-TTTCATCCACGAATTTCAATGTTCAATGCTGC-AAGCAGACCTCTGAATAAATGGATTTGGTTTTG-TTTAAACATTTCTGGTTATGTGATTATGTTCTTTTGACATATAAAGTACTTGTGGTTGATGGATTTAAGTTGTAAAGTTTTCTTCACACATTTTACGCTTGCAAACTATGAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E574477" ref_strand="-" ref_description="SGN-E574477 	[33950]">
      <seq>gcagtgttattccacttcttcagaggagaagttgggaaatggattgctttcgttgcagtagtactcaggcttttcttcccacgacattttccagactggttggaaatgcctggttcattaatcctactcctagtggttgcacccaacatctttgcccacactctcagagacagttggattggcactgcaatatgtcttttgattggctgctatctcctccaagagcacatcagagcctccggtggattcagaaattccttcacacaaagtaatggtatatctaacacagttggtataatccttctgttggtctatccaatctgggctctgctttttcgagtcgtttgatgaactatagctgcaacaatcatatgtgtgtttcgtccacgaatttcaatgttcaatgctgcaagcagacctctgaataaatggatttggttttgtttaaacatttctggttatgtgattatgtacttttgacatataaagtacttatggttgatggatttaagttgtaaagttttcttcacacatttcacgcttgcaaactatgaacttggaaaggtgacaattatagtattatttttatatggctaatcaaacactaccttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="72281" stop="69668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71981" g_stop="71959" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71958" i_stop="71825" i_length="134">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.945" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71824" g_stop="71754" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="94" r_length="71" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71753" i_stop="70740" i_length="1014">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70739" g_stop="70278" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="559" r_length="465" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E574477" ref_strand="-">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574477" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="71981" e_stop="71959"/>
          <exon e_start="71824" e_stop="71754"/>
          <exon e_start="70739" e_stop="70278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGTGTTATTCCACTTCTTCAGGTAAACTTCTCTTGTTTGCTACTATTAAGTTTTCCTTGCTTCTTGTCATCCAAGATGTTCTCTTATCACTTGTTGCTACCTGATTCAAAGAGGTTTCTTTTCTTTGTTAATCAATTGTCGTTTTTGATCACCAGAGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAGGTATGAACATTAGCTTTTAATTTATATGATGAAAATAACCTATTGGTTATCATTTTCATTTTTGTGCAATTAAGTTCTTTTGTTTGTAATCCAAGATTCTGTTACCTTTTCCGTTAACTTTTTCTTAATATTAAAAAAAAATTAAATACAACTGGGCACACTTTCCAGCAAGTAATATGCTCCCCAATTATTACCATGACATGTCATGGTTCATGGAAGAGATATCTCTAAATTTTTCAAGCTGCATAGATATTCAACTTAAAAAGTTTCTTCGAGTATACTTATTGAAACTCGGAGCTTCACATAGTGATGAAATACTGAAGATGTTGCAGCATTGCCAACTGAGAAGTGTCACTAGGATTAGCTATTGTGATTTTGCTTTCTTCGGTAGACTCTTTTATATTTATTCTGATGGTAAAACACGATTTGCGTATAGTGATAATATCTTCACTCCCTGGAGCTCTCATGATGAACTTAATGTAGTTTGCTCCAAGAAATCTATTACACCCTTAGACTTAATAATAGATGGTGGAAAGATCTATTTACACCCTTAGACTTAATCATATATGGTGGAAAGACTAGCAAGACTATGGCCCGGTGGTTGGTGGTTGGGAAGGGCAAACGTTACTCGATGGATTAGTTAATGTGTGTGCAAGCCGGCTCGTATACTGTTCTTCTAAAAAATACACACATTGACACACACATGGTTGATGCGTGTGCAAGCTGGCTCGTATACTACCTAACACCCAGCCAGAACTGATGTGGGAGAAATAACATCCTTGCACGCCACTCTGATACCATGAACTCAACCTCAAAATCTAGATTCATGACGGATGGATTGCTCAAGACTATAAAAAGAGATCAAACACCCATCCACAACCAATGTGGGAGAATCAACACTAAATCTTAATCCTAAATTTGCCTATCTACTTAAGTTACGCTACTAATGCTTGCTCTATGGTTCTTTTATATATGCTAATCCTCCTTTATAATGCTGTTGTCCATGAAATATAGACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTTTCAGAGACAGCTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAA-TTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGA-TTGTAAAG--TT-TTCACTCA-TTCACGCTTGCAATCTATGAACTTG</genome_strand>
        <mrna_strand>GCAGTGTTATTCCACTTCTTCAG......................................................................................................................................AGGAGAAGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTCAGGCTTTTCTTCCCACGACATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTGCACCCAACATCTTTGCCCACACTCTCAGAGACAGTTGGATTGGCACTGCAATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTCACACAAAGTAATGGTATATCTAACACAGTTGGTATAATCCTTCTGTTGGTCTATCCAATCTGGGCTCTGCTTTTTCGAGTCGTTTGATGAACTATAGCTGCAACAATCATATGTGTG-TTTCGTCCACGAATTTCAATGTTCAATGCTGC-AAGCAGACCTCTGAATAAATGGATTTGGTTTTG-TTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATAAAGTACTTATGGTTGATGGATTTAAGTTGTAAAGTTTTCTTCACACATTTCACGCTTGCAAACTATGAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E581440" ref_strand="-" ref_description="SGN-E581440 	[6668]">
      <seq>ccacctcttcagaggagaggttgggaaatggattgctttcgttgcagtagtactcaggcttttcttcccacgacattttccagactggttggaaatgcctggttcattaatcctactcctagtggttgcacccaacatctttgcccacactctcagagacagttggattggcactgcgatatgtcttttgattggctgctatctcctccaagagcacatcagagcctccggtggattcagaaattccttcacacaaagtaatggtatatctaacacagttggtatagtccttctgttggtctatccaatctgggctctgctatttcgagtcgtttgatgaactatagctgcaacaatcatatgtgtgtttcatccacgaatttcaatgttcaatgctgcaagcagacctctgaataaatggatttggttttgtttaaacatttctggttatgtgattatgttcttttgacatataaagtacttgtggttgatggatttaagttgtaaagttttcttcacacatttcacgcttgcaaactatgaacttggaaaggtgacaattatagtattatttttatatggctaatcaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="72131" stop="70008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71970" g_stop="71959" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71958" i_stop="71825" i_length="134">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.945" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71824" g_stop="71754" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="83" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71753" i_stop="70740" i_length="1014">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70739" g_stop="70278" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="548" r_length="465" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E581440" ref_strand="-">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581440" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="71970" e_stop="71959"/>
          <exon e_start="71824" e_stop="71754"/>
          <exon e_start="70739" e_stop="70278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTTCTTCAGGTAAACTTCTCTTGTTTGCTACTATTAAGTTTTCCTTGCTTCTTGTCATCCAAGATGTTCTCTTATCACTTGTTGCTACCTGATTCAAAGAGGTTTCTTTTCTTTGTTAATCAATTGTCGTTTTTGATCACCAGAGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAGGTATGAACATTAGCTTTTAATTTATATGATGAAAATAACCTATTGGTTATCATTTTCATTTTTGTGCAATTAAGTTCTTTTGTTTGTAATCCAAGATTCTGTTACCTTTTCCGTTAACTTTTTCTTAATATTAAAAAAAAATTAAATACAACTGGGCACACTTTCCAGCAAGTAATATGCTCCCCAATTATTACCATGACATGTCATGGTTCATGGAAGAGATATCTCTAAATTTTTCAAGCTGCATAGATATTCAACTTAAAAAGTTTCTTCGAGTATACTTATTGAAACTCGGAGCTTCACATAGTGATGAAATACTGAAGATGTTGCAGCATTGCCAACTGAGAAGTGTCACTAGGATTAGCTATTGTGATTTTGCTTTCTTCGGTAGACTCTTTTATATTTATTCTGATGGTAAAACACGATTTGCGTATAGTGATAATATCTTCACTCCCTGGAGCTCTCATGATGAACTTAATGTAGTTTGCTCCAAGAAATCTATTACACCCTTAGACTTAATAATAGATGGTGGAAAGATCTATTTACACCCTTAGACTTAATCATATATGGTGGAAAGACTAGCAAGACTATGGCCCGGTGGTTGGTGGTTGGGAAGGGCAAACGTTACTCGATGGATTAGTTAATGTGTGTGCAAGCCGGCTCGTATACTGTTCTTCTAAAAAATACACACATTGACACACACATGGTTGATGCGTGTGCAAGCTGGCTCGTATACTACCTAACACCCAGCCAGAACTGATGTGGGAGAAATAACATCCTTGCACGCCACTCTGATACCATGAACTCAACCTCAAAATCTAGATTCATGACGGATGGATTGCTCAAGACTATAAAAAGAGATCAAACACCCATCCACAACCAATGTGGGAGAATCAACACTAAATCTTAATCCTAAATTTGCCTATCTACTTAAGTTACGCTACTAATGCTTGCTCTATGGTTCTTTTATATATGCTAATCCTCCTTTATAATGCTGTTGTCCATGAAATATAGACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTTTCAGAGACAGCTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAA-TTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGA-TTGTAAAGTTT---TCACTCA-TTCACGCTTGCAATCTATGAACTTG</genome_strand>
        <mrna_strand>CCACCTCTTCAG......................................................................................................................................AGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTCAGGCTTTTCTTCCCACGACATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTGCACCCAACATCTTTGCCCACACTCTCAGAGACAGTTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTCACACAAAGTAATGGTATATCTAACACAGTTGGTATAGTCCTTCTGTTGGTCTATCCAATCTGGGCTCTGCTATTTCGAGTCGTTTGATGAACTATAGCTGCAACAATCATATGTGTG-TTTCATCCACGAATTTCAATGTTCAATGCTGC-AAGCAGACCTCTGAATAAATGGATTTGGTTTTG-TTTAAACATTTCTGGTTATGTGATTATGTTCTTTTGACATATAAAGTACTTGTGGTTGATGGATTTAAGTTGTAAAGTTTTCTTCACACATTTCACGCTTGCAAACTATGAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E607466" ref_strand="+" ref_description="SGN-E607466 	[23432]">
      <seq>tgctttcgttgcagtagtactcaggcttttcttcccacgacattttccagactggttggaaatgcctggttcattaatcctactcctagtggttgcacccaacatctttgcccacactctcagagacagttggattggcactgcgatatgtcttttgattggctgctatctcctccaagagcacatcagagcctccggtggattcagaaattccttcacacaaagtaatggtatatctaacacagttggtatagtccttctgttggtctatccaatctgggctctgctatttcgagtcgtttgatgaactatagctgcaacaatcatatgtgtgtttcatccacgaatttcaatgttcaatgctgcaagcagacctctgaataaatggatttggttttgtttaaacatttctggttatgtgattatgttcttttgacatataaagtacttgtggttgatggatttaagttgtaaagttttcttcacacattttacgcttgcaaactatgaacttggaaaggtgacaattatagtattatttttatatggctaatcaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="72103" stop="69675"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71803" g_stop="71754" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71753" i_stop="70740" i_length="1014">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70739" g_stop="70278" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="515" r_length="465" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E607466" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E607466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71803" e_stop="71754"/>
          <exon e_start="70739" e_stop="70278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAGGTATGAACATTAGCTTTTAATTTATATGATGAAAATAACCTATTGGTTATCATTTTCATTTTTGTGCAATTAAGTTCTTTTGTTTGTAATCCAAGATTCTGTTACCTTTTCCGTTAACTTTTTCTTAATATTAAAAAAAAATTAAATACAACTGGGCACACTTTCCAGCAAGTAATATGCTCCCCAATTATTACCATGACATGTCATGGTTCATGGAAGAGATATCTCTAAATTTTTCAAGCTGCATAGATATTCAACTTAAAAAGTTTCTTCGAGTATACTTATTGAAACTCGGAGCTTCACATAGTGATGAAATACTGAAGATGTTGCAGCATTGCCAACTGAGAAGTGTCACTAGGATTAGCTATTGTGATTTTGCTTTCTTCGGTAGACTCTTTTATATTTATTCTGATGGTAAAACACGATTTGCGTATAGTGATAATATCTTCACTCCCTGGAGCTCTCATGATGAACTTAATGTAGTTTGCTCCAAGAAATCTATTACACCCTTAGACTTAATAATAGATGGTGGAAAGATCTATTTACACCCTTAGACTTAATCATATATGGTGGAAAGACTAGCAAGACTATGGCCCGGTGGTTGGTGGTTGGGAAGGGCAAACGTTACTCGATGGATTAGTTAATGTGTGTGCAAGCCGGCTCGTATACTGTTCTTCTAAAAAATACACACATTGACACACACATGGTTGATGCGTGTGCAAGCTGGCTCGTATACTACCTAACACCCAGCCAGAACTGATGTGGGAGAAATAACATCCTTGCACGCCACTCTGATACCATGAACTCAACCTCAAAATCTAGATTCATGACGGATGGATTGCTCAAGACTATAAAAAGAGATCAAACACCCATCCACAACCAATGTGGGAGAATCAACACTAAATCTTAATCCTAAATTTGCCTATCTACTTAAGTTACGCTACTAATGCTTGCTCTATGGTTCTTTTATATATGCTAATCCTCCTTTATAATGCTGTTGTCCATGAAATATAGACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTTTCAGAGACAGCTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAA-TTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGA-TTGTAAAGTTTT---CACTCA-TTCACGCTTGCAATCTATGAACTTG</genome_strand>
        <mrna_strand>TGCTTTCGTTGCAGTAGTACTCAGGCTTTTCTTCCCACGACATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTGCACCCAACATCTTTGCCCACACTCTCAGAGACAGTTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTCACACAAAGTAATGGTATATCTAACACAGTTGGTATAGTCCTTCTGTTGGTCTATCCAATCTGGGCTCTGCTATTTCGAGTCGTTTGATGAACTATAGCTGCAACAATCATATGTGTG-TTTCATCCACGAATTTCAATGTTCAATGCTGC-AAGCAGACCTCTGAATAAATGGATTTGGTTTTG-TTTAAACATTTCTGGTTATGTGATTATGTTCTTTTGACATATAAAGTACTTGTGGTTGATGGATTTAAGTTGTAAAGTTTTCTTCACACATTTTACGCTTGCAAACTATGAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E347699" ref_strand="+" ref_description="SGN-E347699 	[cTOF-26-G9]">
      <seq>gagtgcagaatcattcggaatttgttcaataacttttcagatctagtagtagggggttgaaagaaaaatgggtaggatggattatttggctatgaagactgatgaagatactaacaaattgattaatgaagatctgaatgagctaaagttagctgctgagaagctctttgaccatgccactaaacttggcggtcttggatttggtacttctcttctcaaatggtttgcctcatttgctgccatttatttgctgatactggaccggacaaactgaaaaacaaatatgttgactggacttctagtcccatatatcttcttcagtttccctgcagtgttattccacttcttcagaggagaggttgggaaatggattgctttcgttgcagtagtacttaggcttttcttcccacgacattttccagactggttggaaatgcctggttcattaatcctactcctagtggtttcgcccaacatctttgcccacactttcagagacagctggattggcactgcgatatgtcttttgattggctgctatctcctccaagagcacatcagagccttcggtggattcagaaattccttaacacaaagcaatggtatattctacacagtttggataattcttctgttggtatatccaatctgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="76162" stop="70208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75862" g_stop="75621" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75620" i_stop="72067" i_length="3554">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.739" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72066" g_stop="71959" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="351" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71958" i_stop="71825" i_length="134">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71824" g_stop="71754" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="422" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71753" i_stop="70740" i_length="1014">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70739" g_stop="70508" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="654" r_length="232" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E347699" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75862" e_stop="75621"/>
          <exon e_start="72066" e_stop="71959"/>
          <exon e_start="71824" e_stop="71754"/>
          <exon e_start="70739" e_stop="70508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGCAGAATCATTCGGAATTTGTTCAATAACTTTTCAGATCTAGTAGTA-GGGGTTGAAAGAAAAATGGGTAGGATGGATTATTTGGCTATGAAGACTGATGAAGATACTAACAAATTGATTAATGAAGATCTGAATGAGCTAAAGTTAGCTGCTGAGAAGCTCTTTGACCATGCCACTAAACTTGGCGGTCTTGGATTTGGTACTTCTCTTCTCAAATGGTTTGCCTCATTTGCTGCCATGTAATGTCCCTTTTCCTCTTTTATTTTAAACGAATCTTATTTTACTTTCTCTCTATATCTATTACAATGTGGAAACTGAGAAAGGGACTTTTGACCTGGAATAGCTTGATATTGTCTCCTTTTGATTTTGATGTTTTCAATTTCAAAAATTGAAAAGTGATAACACCATTAAGTTTTATTTAGACACTCGAACTATTGATTTGAGCACCTGAACGTATTCCAATTAGATACTTTTGGTTCAAATTTTGGAAAAAAGTAAATATATATTATCTCCGTTAGTTAGCATTTGTTTCGATAAGCCCATAAGCCTCCAGAATTTTCTAGTTAAGGTTGATCTTCATAATTAAAGAAGATGAAAGTAATTTATGTGGTTAACTTAATTAGCTAATAGGTCTTGAGATGTGAAATGTTTCCAGGGTTAAACAAGACTTCTCTATAAAAGAAGAAATAGGAACAACAAAATATAATTACTACGAAACCAGCAAGATAGGAAAATGGCTTTTAAGCTATAAAGTTGATTTTTTGGTTCTGGTTTTCTCTGTGAACTCTTCCGCTCAATTTATGAGAGGCTTTGAAATGAGAAAGTGAGATACTAATATGAGATAACATTGCATTGTCATGTGAATGGCCTAAGGCCATCATGTGATGCCAATTTTTGGCAGTAAGACTTGGTCTTAGGCCATTCACATTAGCGATAATGTTATTATGTGGCTTCACATGTCATCTCATATTAGGATTAAACAAGATTTGCCTTGAGAGATATCTCCTTAGCTTTGAAGTCAATGATGAAGTTTTGTCTATTTTAAAAGCTAAGCCTTGTAATATGAGCTTGTAACCTAAGTGGGGGTAACAACGTGGTGGAATGTTGGGATAATCTTGATGGTTGGGCTTGTGGGCTATTCTCTGACCTGTCCTATCCAAGCACAGAGTTGGGCTACGCGGTCCAAATGAAAGTATGGGCTGTTTGGCTATTAGAGTAGGGTGAATTGAGTGAGACTGGTTTCACTGTGCAACGAATAGTCCTCGCTTTGTGCAGTGTTAAGGATAATGAGCTGGTGCTTTCTAATCTCAATTTTTTTTTTTTTTGAAAATATATCTATTTTCAAAGGATTTCTTGTTGTCAAAGGTTCACATCACGTGATGACCTTAGAAAGTTCACACGTAATGACAATGTAATCACATGACTTCACATGTTATCTCATATTAGTATTCTATTTTCTCATTTCAAAAGCCTCCTATATACTCTAGCAAAAGAGTTCACAGAGAAAAAAACAGAATGACTTCTACTACAAATTAACAAGATTGGAAAATGACTTTTAAGCTACTGAGTTGATTTCTTGGTTCTGCTTTTTCTCTGAGAACTCTTAAAGAAGAGATATACGAGGGTTTTGAAATGAGAGATTGGGATACTAATATGTTAGATAACATGTAAAGCTATGTGATTACATTGTCACTGCATGTGAATGGCCCAAGGCCATCACGTGATGCCAACCTTTGGCATCAACTAATCCTTTTAAAATAGATATATTATCAACAGTTTAATCACTTCCGACTCATGAGACTGAAGTTGAGAATTGCTCATCTAAAGTTGAAAAAGTTTATCCCAAAAGATCTGAAGTTGGGGACTGGGAAGCCTAACTTCATTACCCAAAATGTCTGAAATTAGCGATTGGATGGGATAATGCCTGCACCATAATAGTATGTTTTAATCCCTCCAGTTTCAATGTTTGGGAGTGGGATTGGCGTGGATTTAATCATCTTAGATGTCCCTTTTCAGTTTGTTAGTCAGTAGCTTGTAACATTTTGATCTGTTAGCCAACGTTGCTGTTGAACTCAGAAGTTTTCAGTGCTGAAACTTATTGGTGGGAATTTGGCTGGTGAGTTGCTTCATCAATGACAATAAATCTGATTCTAGGGACTATTGGAGGTTGGGGTTGTCCTATCCTTGAGAAATTTGACATTATCGTTGATCTTTAGTTATCCCCATGAGCAATTGAAATCGTCAGTTCACTGCTAATTACTCATCAAATATACCTAATGAATAGGGAAGAGAAATGCACTCAAATCTGCTGCTAGTTTTAAATTTCTACTCTGAGTGAAGGACAAGTGACATTAAGTCTACAGTAATGTGGTACACCAACTTATTCAGTTACCAATCACCCACAAGGCATGACTTGGTTGAAAAATGCATCATATTAGCAAAGCTCATGAAGTTGTAGCAAATTGGAAAGTAGAGGCTTTTAACCCGGAAATAGATTAGGCATATTCCACTGTTATTATCAGGATATGAAAATTGCTCCCGCAAAATTAATGTGTTGAATTTTCTTGGCTGAGACTTGAGTGTCCTGCATTGGCAAACCAACAACAATGCTAATCCACAGAGGAAGATTAAATCCTAGATAATAAGACATGTTGGAATGCCTTATTGACACATTTGCTGTGGAATGTTTATTAACAAGTAGGAGCGGAAAGAAGTTTTCACTCTGCCAAAAAAGTATGTCTATTGTTTTGCGGTTGATCATACATATGTTTAAATATTTGTACTTAACTCTGGCTGGAAGAAACTTGCTGTACAATATTAGTATCCATATTTCAACTCGATGGTCTTTTTGAACTTGTTACATCTTGAGCTGAGTTTCAGCAATGTGGAATATCGTCTTTTTCCTGATTTTTGGGGGTCATCCTGTTTAGCTGATCTAATTTGGTATTAATCTTGACGTTGTATCCATAATCGTTCAAATTCAATGTTTTGCTTAATCCTGTACCAATCTTCTTTCCTTTCAAGTTTCAACATAGTTAATACCAACTCATCACCTATAGATTTTCCTTAGAGTAAGGTTGTGAGTCTTCTTCTTTCCTCCTATTTTTGTTTCCTTTATGTTGTATCTTCCATTTAGATCCCAGAGAAGTAATCTACTTTGACTACACATGATGAAGTCCAAGAGAATCGTTATCTATTTAAATAAGATGAGACATCCCAAGCGTTGACAATATTTCTTGACAAACTTTTCATCCTAAATATAACCACTCTGCATCAGAAAATCTTATCTCCGGTCTCCTTCCAAATGCAATAGAGAAGTCTTAAGACTTTCTCTTGACCATCTTAGTAGGTGCTGGCGAACTCCAAATCTTAACTGCAAATCTTGAATTCACCTTTACGTGCATATGGAGTCATTTGTTTTTTTGAAGCAGTTTAACATGCCATAACATTGCAATATCAGTCCAGTTAATTTAAGTATGCCCAGAGGAAGACATTAGGAAATTCAGTGTAAAAAGCTAACCCACCCTCATACATGATATTGTGTAAAACCTCTAGAGAACATGACATGACGGGAATATTGTTTTAAGCTTTTAGATGAAACAATTGAATAAGTATATTCTGATGTTGTTGAGGGAGCTGGTGAAATATAACTCATCTTGGTGGAATGTGCTCAGTTGGCTGGTTGCAAGTAATTTTAAATGCTTTTAGTCAAAGAGGTTTGTTTAGAATCTAGAGTTTACACCTTTTTCCTGATGGATTTTTTGATAACGGTTCGAGCAAATATCATCTGCAGTTATTTGCTGATACTGGACCGGACAAACTGGAAAACAAATATGTTGACTGGACTTCTAGTCCCATATATCTTCTTCAGTTTCCCTGCAGTGTTATTCCACTTCTTCAGGTAAACTTCTCTTGTTTGCTACTATTAAGTTTTCCTTGCTTCTTGTCATCCAAGATGTTCTCTTATCACTTGTTGCTACCTGATTCAAAGAGGTTTCTTTTCTTTGTTAATCAATTGTCGTTTTTGATCACCAGAGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAGGTATGAACATTAGCTTTTAATTTATATGATGAAAATAACCTATTGGTTATCATTTTCATTTTTGTGCAATTAAGTTCTTTTGTTTGTAATCCAAGATTCTGTTACCTTTTCCGTTAACTTTTTCTTAATATTAAAAAAAAATTAAATACAACTGGGCACACTTTCCAGCAAGTAATATGCTCCCCAATTATTACCATGACATGTCATGGTTCATGGAAGAGATATCTCTAAATTTTTCAAGCTGCATAGATATTCAACTTAAAAAGTTTCTTCGAGTATACTTATTGAAACTCGGAGCTTCACATAGTGATGAAATACTGAAGATGTTGCAGCATTGCCAACTGAGAAGTGTCACTAGGATTAGCTATTGTGATTTTGCTTTCTTCGGTAGACTCTTTTATATTTATTCTGATGGTAAAACACGATTTGCGTATAGTGATAATATCTTCACTCCCTGGAGCTCTCATGATGAACTTAATGTAGTTTGCTCCAAGAAATCTATTACACCCTTAGACTTAATAATAGATGGTGGAAAGATCTATTTACACCCTTAGACTTAATCATATATGGTGGAAAGACTAGCAAGACTATGGCCCGGTGGTTGGTGGTTGGGAAGGGCAAACGTTACTCGATGGATTAGTTAATGTGTGTGCAAGCCGGCTCGTATACTGTTCTTCTAAAAAATACACACATTGACACACACATGGTTGATGCGTGTGCAAGCTGGCTCGTATACTACCTAACACCCAGCCAGAACTGATGTGGGAGAAATAACATCCTTGCACGCCACTCTGATACCATGAACTCAACCTCAAAATCTAGATTCATGACGGATGGATTGCTCAAGACTATAAAAAGAGATCAAACACCCATCCACAACCAATGTGGGAGAATCAACACTAAATCTTAATCCTAAATTTGCCTATCTACTTAAGTTACGCTACTAATGCTTGCTCTATGGTTCTTTTATATATGCTAATCCTCCTTTATAATGCTGTTGTCCATGAAATATAGACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTTTCAGAGACAGCTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGC</genome_strand>
        <mrna_strand>GAGTGCAGAATCATTCGGAATTTGTTCAATAACTTTTCAGATCTAGTAGTAGGGGGTTGAAAGAAAAATGGGTAGGATGGATTATTTGGCTATGAAGACTGATGAAGATACTAACAAATTGATTAATGAAGATCTGAATGAGCTAAAGTTAGCTGCTGAGAAGCTCTTTGACCATGCCACTAAACTTGGCGGTCTTGGATTTGGTACTTCTCTTCTCAAATGGTTTGCCTCATTTGCTGCCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTGCTGATACTGGACCGGACAAACTGAAAAACAAATATGTTGACTGGACTTCTAGTCCCATATATCTTCTTCAGTTTCCCTGCAGTGTTATTCCACTTCTTCAG......................................................................................................................................AGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTTTCAGAGACAGCTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTTCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATTCTACACAGTTTGGATAATTCTTCTGTTGGTATATCCAATCTGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E293212" ref_strand="+" ref_description="SGN-E293212 	[cLET-12-K14]">
      <seq>aaaaagcaaatactcgacagactgttgtagagtgcagaatcattcggaatttgttcaataacttttcagatctagtagtagggggttgaaagaaaaatgggtaggatggattatttggctatgaagactgatgaagatactaacaaattgattaatgaagatctgaatgagctaaagttagctgctgagaagctctttgaccatgccactaaacttggcggtcttggatttggtacttctcttctcaaatggattgcctcatttgctgccatttatttgctgatactggaccggacaaactggaaaacaaatatgttgactggacttctagtcccatatatcttcttcagtttccctgcagtgttattccacttcttcagaggagaggttgggaaatggattgctttcgttgcagtagtacttaagcttttcttcccacgacattttccagactggttggaaatgcctggttcattaatcctactcctagtggtttcgcccaacatctttgcccacactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="76191" stop="70371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75891" g_stop="75621" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75620" i_stop="72067" i_length="3554">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.739" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72066" g_stop="71959" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="380" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71958" i_stop="71825" i_length="134">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71824" g_stop="71754" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="451" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71753" i_stop="70740" i_length="1014">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70739" g_stop="70671" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="520" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E293212" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75891" e_stop="75621"/>
          <exon e_start="72066" e_stop="71959"/>
          <exon e_start="71824" e_stop="71754"/>
          <exon e_start="70739" e_stop="70671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGCAAATACTCGACAGACTGTTGTAGAGTGCAGAATCATTCGGAATTTGTTCAATAACTTTTCAGATCTAGTAGTA-GGGGTTGAAAGAAAAATGGGTAGGATGGATTATTTGGCTATGAAGACTGATGAAGATACTAACAAATTGATTAATGAAGATCTGAATGAGCTAAAGTTAGCTGCTGAGAAGCTCTTTGACCATGCCACTAAACTTGGCGGTCTTGGATTTGGTACTTCTCTTCTCAAATGGTTTGCCTCATTTGCTGCCATGTAATGTCCCTTTTCCTCTTTTATTTTAAACGAATCTTATTTTACTTTCTCTCTATATCTATTACAATGTGGAAACTGAGAAAGGGACTTTTGACCTGGAATAGCTTGATATTGTCTCCTTTTGATTTTGATGTTTTCAATTTCAAAAATTGAAAAGTGATAACACCATTAAGTTTTATTTAGACACTCGAACTATTGATTTGAGCACCTGAACGTATTCCAATTAGATACTTTTGGTTCAAATTTTGGAAAAAAGTAAATATATATTATCTCCGTTAGTTAGCATTTGTTTCGATAAGCCCATAAGCCTCCAGAATTTTCTAGTTAAGGTTGATCTTCATAATTAAAGAAGATGAAAGTAATTTATGTGGTTAACTTAATTAGCTAATAGGTCTTGAGATGTGAAATGTTTCCAGGGTTAAACAAGACTTCTCTATAAAAGAAGAAATAGGAACAACAAAATATAATTACTACGAAACCAGCAAGATAGGAAAATGGCTTTTAAGCTATAAAGTTGATTTTTTGGTTCTGGTTTTCTCTGTGAACTCTTCCGCTCAATTTATGAGAGGCTTTGAAATGAGAAAGTGAGATACTAATATGAGATAACATTGCATTGTCATGTGAATGGCCTAAGGCCATCATGTGATGCCAATTTTTGGCAGTAAGACTTGGTCTTAGGCCATTCACATTAGCGATAATGTTATTATGTGGCTTCACATGTCATCTCATATTAGGATTAAACAAGATTTGCCTTGAGAGATATCTCCTTAGCTTTGAAGTCAATGATGAAGTTTTGTCTATTTTAAAAGCTAAGCCTTGTAATATGAGCTTGTAACCTAAGTGGGGGTAACAACGTGGTGGAATGTTGGGATAATCTTGATGGTTGGGCTTGTGGGCTATTCTCTGACCTGTCCTATCCAAGCACAGAGTTGGGCTACGCGGTCCAAATGAAAGTATGGGCTGTTTGGCTATTAGAGTAGGGTGAATTGAGTGAGACTGGTTTCACTGTGCAACGAATAGTCCTCGCTTTGTGCAGTGTTAAGGATAATGAGCTGGTGCTTTCTAATCTCAATTTTTTTTTTTTTTGAAAATATATCTATTTTCAAAGGATTTCTTGTTGTCAAAGGTTCACATCACGTGATGACCTTAGAAAGTTCACACGTAATGACAATGTAATCACATGACTTCACATGTTATCTCATATTAGTATTCTATTTTCTCATTTCAAAAGCCTCCTATATACTCTAGCAAAAGAGTTCACAGAGAAAAAAACAGAATGACTTCTACTACAAATTAACAAGATTGGAAAATGACTTTTAAGCTACTGAGTTGATTTCTTGGTTCTGCTTTTTCTCTGAGAACTCTTAAAGAAGAGATATACGAGGGTTTTGAAATGAGAGATTGGGATACTAATATGTTAGATAACATGTAAAGCTATGTGATTACATTGTCACTGCATGTGAATGGCCCAAGGCCATCACGTGATGCCAACCTTTGGCATCAACTAATCCTTTTAAAATAGATATATTATCAACAGTTTAATCACTTCCGACTCATGAGACTGAAGTTGAGAATTGCTCATCTAAAGTTGAAAAAGTTTATCCCAAAAGATCTGAAGTTGGGGACTGGGAAGCCTAACTTCATTACCCAAAATGTCTGAAATTAGCGATTGGATGGGATAATGCCTGCACCATAATAGTATGTTTTAATCCCTCCAGTTTCAATGTTTGGGAGTGGGATTGGCGTGGATTTAATCATCTTAGATGTCCCTTTTCAGTTTGTTAGTCAGTAGCTTGTAACATTTTGATCTGTTAGCCAACGTTGCTGTTGAACTCAGAAGTTTTCAGTGCTGAAACTTATTGGTGGGAATTTGGCTGGTGAGTTGCTTCATCAATGACAATAAATCTGATTCTAGGGACTATTGGAGGTTGGGGTTGTCCTATCCTTGAGAAATTTGACATTATCGTTGATCTTTAGTTATCCCCATGAGCAATTGAAATCGTCAGTTCACTGCTAATTACTCATCAAATATACCTAATGAATAGGGAAGAGAAATGCACTCAAATCTGCTGCTAGTTTTAAATTTCTACTCTGAGTGAAGGACAAGTGACATTAAGTCTACAGTAATGTGGTACACCAACTTATTCAGTTACCAATCACCCACAAGGCATGACTTGGTTGAAAAATGCATCATATTAGCAAAGCTCATGAAGTTGTAGCAAATTGGAAAGTAGAGGCTTTTAACCCGGAAATAGATTAGGCATATTCCACTGTTATTATCAGGATATGAAAATTGCTCCCGCAAAATTAATGTGTTGAATTTTCTTGGCTGAGACTTGAGTGTCCTGCATTGGCAAACCAACAACAATGCTAATCCACAGAGGAAGATTAAATCCTAGATAATAAGACATGTTGGAATGCCTTATTGACACATTTGCTGTGGAATGTTTATTAACAAGTAGGAGCGGAAAGAAGTTTTCACTCTGCCAAAAAAGTATGTCTATTGTTTTGCGGTTGATCATACATATGTTTAAATATTTGTACTTAACTCTGGCTGGAAGAAACTTGCTGTACAATATTAGTATCCATATTTCAACTCGATGGTCTTTTTGAACTTGTTACATCTTGAGCTGAGTTTCAGCAATGTGGAATATCGTCTTTTTCCTGATTTTTGGGGGTCATCCTGTTTAGCTGATCTAATTTGGTATTAATCTTGACGTTGTATCCATAATCGTTCAAATTCAATGTTTTGCTTAATCCTGTACCAATCTTCTTTCCTTTCAAGTTTCAACATAGTTAATACCAACTCATCACCTATAGATTTTCCTTAGAGTAAGGTTGTGAGTCTTCTTCTTTCCTCCTATTTTTGTTTCCTTTATGTTGTATCTTCCATTTAGATCCCAGAGAAGTAATCTACTTTGACTACACATGATGAAGTCCAAGAGAATCGTTATCTATTTAAATAAGATGAGACATCCCAAGCGTTGACAATATTTCTTGACAAACTTTTCATCCTAAATATAACCACTCTGCATCAGAAAATCTTATCTCCGGTCTCCTTCCAAATGCAATAGAGAAGTCTTAAGACTTTCTCTTGACCATCTTAGTAGGTGCTGGCGAACTCCAAATCTTAACTGCAAATCTTGAATTCACCTTTACGTGCATATGGAGTCATTTGTTTTTTTGAAGCAGTTTAACATGCCATAACATTGCAATATCAGTCCAGTTAATTTAAGTATGCCCAGAGGAAGACATTAGGAAATTCAGTGTAAAAAGCTAACCCACCCTCATACATGATATTGTGTAAAACCTCTAGAGAACATGACATGACGGGAATATTGTTTTAAGCTTTTAGATGAAACAATTGAATAAGTATATTCTGATGTTGTTGAGGGAGCTGGTGAAATATAACTCATCTTGGTGGAATGTGCTCAGTTGGCTGGTTGCAAGTAATTTTAAATGCTTTTAGTCAAAGAGGTTTGTTTAGAATCTAGAGTTTACACCTTTTTCCTGATGGATTTTTTGATAACGGTTCGAGCAAATATCATCTGCAGTTATTTGCTGATACTGGACCGGACAAACTGGAAAACAAATATGTTGACTGGACTTCTAGTCCCATATATCTTCTTCAGTTTCCCTGCAGTGTTATTCCACTTCTTCAGGTAAACTTCTCTTGTTTGCTACTATTAAGTTTTCCTTGCTTCTTGTCATCCAAGATGTTCTCTTATCACTTGTTGCTACCTGATTCAAAGAGGTTTCTTTTCTTTGTTAATCAATTGTCGTTTTTGATCACCAGAGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAGGTATGAACATTAGCTTTTAATTTATATGATGAAAATAACCTATTGGTTATCATTTTCATTTTTGTGCAATTAAGTTCTTTTGTTTGTAATCCAAGATTCTGTTACCTTTTCCGTTAACTTTTTCTTAATATTAAAAAAAAATTAAATACAACTGGGCACACTTTCCAGCAAGTAATATGCTCCCCAATTATTACCATGACATGTCATGGTTCATGGAAGAGATATCTCTAAATTTTTCAAGCTGCATAGATATTCAACTTAAAAAGTTTCTTCGAGTATACTTATTGAAACTCGGAGCTTCACATAGTGATGAAATACTGAAGATGTTGCAGCATTGCCAACTGAGAAGTGTCACTAGGATTAGCTATTGTGATTTTGCTTTCTTCGGTAGACTCTTTTATATTTATTCTGATGGTAAAACACGATTTGCGTATAGTGATAATATCTTCACTCCCTGGAGCTCTCATGATGAACTTAATGTAGTTTGCTCCAAGAAATCTATTACACCCTTAGACTTAATAATAGATGGTGGAAAGATCTATTTACACCCTTAGACTTAATCATATATGGTGGAAAGACTAGCAAGACTATGGCCCGGTGGTTGGTGGTTGGGAAGGGCAAACGTTACTCGATGGATTAGTTAATGTGTGTGCAAGCCGGCTCGTATACTGTTCTTCTAAAAAATACACACATTGACACACACATGGTTGATGCGTGTGCAAGCTGGCTCGTATACTACCTAACACCCAGCCAGAACTGATGTGGGAGAAATAACATCCTTGCACGCCACTCTGATACCATGAACTCAACCTCAAAATCTAGATTCATGACGGATGGATTGCTCAAGACTATAAAAAGAGATCAAACACCCATCCACAACCAATGTGGGAGAATCAACACTAAATCTTAATCCTAAATTTGCCTATCTACTTAAGTTACGCTACTAATGCTTGCTCTATGGTTCTTTTATATATGCTAATCCTCCTTTATAATGCTGTTGTCCATGAAATATAGACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTT</genome_strand>
        <mrna_strand>AAAAAGCAAATACTCGACAGACTGTTGTAGAGTGCAGAATCATTCGGAATTTGTTCAATAACTTTTCAGATCTAGTAGTAGGGGGTTGAAAGAAAAATGGGTAGGATGGATTATTTGGCTATGAAGACTGATGAAGATACTAACAAATTGATTAATGAAGATCTGAATGAGCTAAAGTTAGCTGCTGAGAAGCTCTTTGACCATGCCACTAAACTTGGCGGTCTTGGATTTGGTACTTCTCTTCTCAAATGGATTGCCTCATTTGCTGCCAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTGCTGATACTGGACCGGACAAACTGGAAAACAAATATGTTGACTGGACTTCTAGTCCCATATATCTTCTTCAGTTTCCCTGCAGTGTTATTCCACTTCTTCAG......................................................................................................................................AGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAAGCTTTTCTTCCCACGACATTTTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E329245" ref_strand="+" ref_description="SGN-E329245 	[cTOD-2-O16]">
      <seq>ctatctcttatcttactcacagcaaagccaccaaaataatttgtctactctctccatagtccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaagaggtgttggcagctttgccttcaaaccaggcaaatacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="80972" stop="83112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81272" g_stop="81664" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="393" r_length="393" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82812" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="546" r_length="153" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E329245" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329245" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81272" e_stop="81664"/>
          <exon e_start="82660" e_stop="82812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCTCTTATCTTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</genome_strand>
        <mrna_strand>CTATCTCTTATCTTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAAGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E291943" ref_strand="+" ref_description="SGN-E291943 	[cLET-7-A4]">
      <seq>ttactcacagcaaagccaccaaaataatttgtctactctctccatagtccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="80984" stop="83236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81284" g_stop="81664" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82936" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="658" r_length="277" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E291943" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81284" e_stop="81664"/>
          <exon e_start="82660" e_stop="82936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGA</genome_strand>
        <mrna_strand>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E296817" ref_strand="+" ref_description="SGN-E296817 	[cLET-26-F9]">
      <seq>ttactcacagcaaagccaccaaaataatttgtctactctctccatagtccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcaggtgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcangcaggcttacttgctctttgcaaactgaaatcaaagaattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="80984" stop="81897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81284" g_stop="81597" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E296817" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>314</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81284" e_stop="81597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGC</genome_strand>
        <mrna_strand>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGGTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCANGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAAGAATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E550667" ref_strand="+" ref_description="SGN-E550667 	[TUS-11-O20]">
      <seq>caaaataatttgtctactctctccatagtccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81003" stop="83193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81303" g_stop="81664" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82893" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="596" r_length="234" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E550667" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81303" e_stop="81664"/>
          <exon e_start="82660" e_stop="82893"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAA</genome_strand>
        <mrna_strand>CAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E474952" ref_strand="+" ref_description="SGN-E474952 	[cSTB-38-D15]">
      <seq>aaaataatttgtctactctctccatagtccatacaaaccatttcttactgccactcatccattttctaacaaagcagaagcagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81004" stop="83233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81304" g_stop="81664" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="360" r_length="360" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82933" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="634" r_length="274" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E474952" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81304" e_stop="81664"/>
          <exon e_start="82660" e_stop="82933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATG</genome_strand>
        <mrna_strand>AAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCATTTTCTAACAAAGCAGAAGCAGAGAGGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E298923" ref_strand="+" ref_description="SGN-E298923 	[cLET-42-K13]">
      <seq>ttgtctactctctccatagtccatacaaactatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81012" stop="83175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81312" g_stop="81664" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82875" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="569" r_length="216" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E298923" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81312" e_stop="81664"/>
          <exon e_start="82660" e_stop="82875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAAC</genome_strand>
        <mrna_strand>TTGTCTACTCTCTCCATAGTCCATACAAACTATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E333353" ref_strand="+" ref_description="SGN-E333353 	[cTOD-20-C15]">
      <seq>catagtccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81026" stop="83327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81326" g_stop="81664" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="339" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83027" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="707" r_length="368" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E333353" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81326" e_stop="81664"/>
          <exon e_start="82660" e_stop="83027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCC</genome_strand>
        <mrna_strand>CATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E317039" ref_strand="+" ref_description="SGN-E317039 	[cTOA-27-O7]">
      <seq>catagtccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81026" stop="83260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81326" g_stop="81664" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="339" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82960" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="640" r_length="301" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E317039" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81326" e_stop="81664"/>
          <exon e_start="82660" e_stop="82960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTC</genome_strand>
        <mrna_strand>CATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E245800" ref_strand="+" ref_description="SGN-E245800 	[cLEF-48-C14]">
      <seq>ccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81032" stop="83215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81332" g_stop="81664" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82915" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="589" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E245800" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81332" e_stop="81664"/>
          <exon e_start="82660" e_stop="82915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCT</genome_strand>
        <mrna_strand>CCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E296147" ref_strand="+" ref_description="SGN-E296147 	[cLET-24-B18]">
      <seq>ccatacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagatgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcacaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81032" stop="83075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81332" g_stop="81664" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82775" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="449" r_length="116" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E296147" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296147" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81332" e_stop="81664"/>
          <exon e_start="82660" e_stop="82775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGG</genome_strand>
        <mrna_strand>CCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGATGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCACAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E332005" ref_strand="+" ref_description="SGN-E332005 	[cTOD-16-P19]">
      <seq>tacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggccactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctgggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81035" stop="83376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81335" g_stop="81664" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83076" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="749" r_length="419" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E332005" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81335" e_stop="81664"/>
          <exon e_start="82660" e_stop="83076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGG-CACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCT-GGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCA</genome_strand>
        <mrna_strand>TACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E337408" ref_strand="+" ref_description="SGN-E337408 	[cTOE-18-I22]">
      <seq>tacaaaccatttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81035" stop="83111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81335" g_stop="81664" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82811" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="482" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E337408" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81335" e_stop="81664"/>
          <exon e_start="82660" e_stop="82811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</genome_strand>
        <mrna_strand>TACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E582869" ref_strand="+" ref_description="SGN-E582869 	[8502]">
      <seq>aaccatttcttactgccactcatccattttctaacaaagcagtaaacagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaataaaattctgcctagaagcccacatcattcacagtcaaggcagagggtgtcagcaagaaacctcacgcccagacttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81039" stop="83192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81339" g_stop="81664" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82892" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="563" r_length="237" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E582869" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E582869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81339" e_stop="81664"/>
          <exon e_start="82660" e_stop="82892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAG-AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAA-GAAATTCTGCCTAG-AGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAG-AA-CTCAGCCCCAGACTTCCA</genome_strand>
        <mrna_strand>AACCATTTCTTACTGCCACTCATCCATTTTCTAACAAAGCAGTAAACAGAGAGGAACACAAGACATTTGATCAAGAAAAAA-GGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAATAAAATTCTGCCTAGAAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAAACCTCACGCCCAGACTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E342145" ref_strand="+" ref_description="SGN-E342145 	[cTOF-10-O10]">
      <seq>catttcttactgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81042" stop="83237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81342" g_stop="81664" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82937" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="601" r_length="278" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E342145" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342145" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81342" e_stop="81664"/>
          <exon e_start="82660" e_stop="82937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGAT</genome_strand>
        <mrna_strand>CATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E461437" ref_strand="+" ref_description="SGN-E461437 	[cPRO-8-O20]">
      <seq>atttcttactgccactcatccattttctaacaaagcagaaacagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaataaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgntacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaacagaaagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81043" stop="83397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81343" g_stop="81664" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83097" g_length="438"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="758" r_length="437" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E461437" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81343" e_stop="81664"/>
          <exon e_start="82660" e_stop="83097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTT</genome_strand>
        <mrna_strand>ATTTCTTACTGCCACTCATCCATTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAAGAAAAAA-GGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAATAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGNTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAA-ACAGAAAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E464096" ref_strand="+" ref_description="SGN-E464096 	[cPRO-16-P24]">
      <seq>atttcttactgccactcatccatattctaacaaagcagaaacagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccacgcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaagcagagggtgtcaacaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81043" stop="83233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81343" g_stop="81664" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82933" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="595" r_length="274" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E464096" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81343" e_stop="81664"/>
          <exon e_start="82660" e_stop="82933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATG</genome_strand>
        <mrna_strand>ATTTCTTACTGCCACTCATCCATATTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAAGAAAAAA-GGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCACGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAAGCAGAGGGTGTCAACAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E460311" ref_strand="+" ref_description="SGN-E460311 	[cPRO-30-L11]">
      <seq>atttcttactgccactcatccattttctaacaaagcagaaacagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaataaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgttttacctacactcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81043" stop="83231"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81343" g_stop="81664" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82931" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="593" r_length="272" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E460311" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E460311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81343" e_stop="81664"/>
          <exon e_start="82660" e_stop="82931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGA</genome_strand>
        <mrna_strand>ATTTCTTACTGCCACTCATCCATTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAAGAAAAAA-GGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAATAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTTACCTACACTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E327665" ref_strand="+" ref_description="SGN-E327665 	[cTOC-20-L24]">
      <seq>tgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaagatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81052" stop="83370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81352" g_stop="81664" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83070" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="724" r_length="411" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E327665" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81352" e_stop="81664"/>
          <exon e_start="82660" e_stop="83070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTT</genome_strand>
        <mrna_strand>TGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAAGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E345790" ref_strand="+" ref_description="SGN-E345790 	[cTOF-18-M10]">
      <seq>tgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagaaggtgtcagcaagaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81052" stop="83177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81352" g_stop="81664" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82877" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="531" r_length="218" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E345790" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81352" e_stop="81664"/>
          <exon e_start="82660" e_stop="82877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTC</genome_strand>
        <mrna_strand>TGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAAGGTGTCAGCAAGAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E325801" ref_strand="+" ref_description="SGN-E325801 	[cTOC-12-E20]">
      <seq>ctcgtgcgcacgaggctgccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81051" stop="83150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81352" g_stop="81664" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="329" r_length="313" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82850" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="520" r_length="191" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E325801" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325801" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81352" e_stop="81664"/>
          <exon e_start="82660" e_stop="82850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</genome_strand>
        <mrna_strand>TGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E347578" ref_strand="+" ref_description="SGN-E347578 	[cTOF-26-K2]">
      <seq>gccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattganggaccatttgaagtgtctccggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81053" stop="83265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81353" g_stop="81664" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82965" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="618" r_length="306" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E347578" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81353" e_stop="81664"/>
          <exon e_start="82660" e_stop="82965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGAT</genome_strand>
        <mrna_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGANGGACCATTTGAAGTGTCTCCGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E297758" ref_strand="+" ref_description="SGN-E297758 	[cLET-38-A12]">
      <seq>gccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81053" stop="83265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81353" g_stop="81664" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82965" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="618" r_length="306" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E297758" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297758" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81353" e_stop="81664"/>
          <exon e_start="82660" e_stop="82965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGAT</genome_strand>
        <mrna_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E277351" ref_strand="+" ref_description="SGN-E277351 	[cLER-3-K7]">
      <seq>gccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81053" stop="83152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81353" g_stop="81664" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82852" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="505" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E277351" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81353" e_stop="81664"/>
          <exon e_start="82660" e_stop="82852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCA</genome_strand>
        <mrna_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E290127" ref_strand="+" ref_description="SGN-E290127 	[cLET-5-F22]">
      <seq>gccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81053" stop="83150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81353" g_stop="81664" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82850" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="503" r_length="191" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E290127" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290127" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81353" e_stop="81664"/>
          <exon e_start="82660" e_stop="82850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</genome_strand>
        <mrna_strand>GCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E344522" ref_strand="+" ref_description="SGN-E344522 	[cTOF-14-F12]">
      <seq>ccactcatccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactggttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81054" stop="83342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81354" g_stop="81664" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83042" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="695" r_length="384" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E344522" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344522" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81354" e_stop="81664"/>
          <exon e_start="82660" e_stop="83042"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACT-GTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGT</genome_strand>
        <mrna_strand>CCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E202916" ref_strand="+" ref_description="SGN-E202916 	[cLEB-1-D12]">
      <seq>gcacgagcactttctaacaaagcagaaacagagaggaacacacgacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaatcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttatgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgcaaaccaatgtcctaccattgaaggaggtgttggcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81063" stop="83085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81356" g_stop="81664" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="309" r_length="309" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82785" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="435" r_length="126" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E202916" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81356" e_stop="81664"/>
          <exon e_start="82660" e_stop="82785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGC</genome_strand>
        <mrna_strand>GCACGAGCACTTTCTAACAAAGCAGAAACAGAGAGGAACACACGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAATCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTATGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCAAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E333896" ref_strand="+" ref_description="SGN-E333896 	[cTOD-24-I6]">
      <seq>atccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggaggccactgttaagtttgaggagaaggatggaattgattatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81060" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81360" g_stop="81664" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="657" r_length="352" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E333896" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333896" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81360" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>ATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGAGGCCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E469805" ref_strand="+" ref_description="SGN-E469805 	[cSTB-14-E24]">
      <seq>atccatattctaacaaagcagaaacagagaggaacacaagacatttgatgaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81060" stop="83270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81360" g_stop="81664" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82970" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="615" r_length="311" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E469805" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81360" e_stop="81664"/>
          <exon e_start="82660" e_stop="82970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCAC</genome_strand>
        <mrna_strand>ATCCATATTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATGAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E285166" ref_strand="+" ref_description="SGN-E285166 	[cLER-20-M6]">
      <seq>tccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81061" stop="83067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81361" g_stop="81664" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82767" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="412" r_length="108" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E285166" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81361" e_stop="81664"/>
          <exon e_start="82660" e_stop="82767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATT</genome_strand>
        <mrna_strand>TCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E292823" ref_strand="+" ref_description="SGN-E292823 	[cLET-11-O1]">
      <seq>ccactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81062" stop="81914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81362" g_stop="81614" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E292823" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>253</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81362" e_stop="81614"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATG</genome_strand>
        <mrna_strand>CCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E328918" ref_strand="+" ref_description="SGN-E328918 	[cTOC-24-L15]">
      <seq>cactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattganggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaacagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81063" stop="83370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81363" g_stop="81664" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83070" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="712" r_length="410" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E328918" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81363" e_stop="81664"/>
          <exon e_start="82660" e_stop="83070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTT</genome_strand>
        <mrna_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGANGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATC-AACAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E327072" ref_strand="+" ref_description="SGN-E327072 	[cTOC-18-B22]">
      <seq>cactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattganggaccatttgaagtgtctccggatggcactgntaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81063" stop="83327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81363" g_stop="81664" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83027" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="670" r_length="368" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E327072" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81363" e_stop="81664"/>
          <exon e_start="82660" e_stop="83027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCC</genome_strand>
        <mrna_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGANGGACCATTTGAAGTGTCTCCGGATGGCACTGNTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E347745" ref_strand="+" ref_description="SGN-E347745 	[cTOF-26-G16]">
      <seq>cactttctaacaaagcataaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgatgtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaagcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgccgaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggatgtgttggcagctttgccttcaaaccacgcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagatggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaagatggaactgattatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81063" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81363" g_stop="81664" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="653" r_length="351" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E347745" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81363" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>CACTTTCTAACAAAGCATAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGATGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAAGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCCGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGATGTGTTGGCAGCTTTGCCTTCAAACCACGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGATGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAAGATGGAACTGATTATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E347650" ref_strand="+" ref_description="SGN-E347650 	[cTOF-26-D12]">
      <seq>cactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattganggaccatttgaagtgtctncggatggcactgttaaagtttgaggagaaggatggaattgattatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81063" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81363" g_stop="81664" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="655" r_length="353" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E347650" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81363" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTT-AAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGANGGACCATTTGAAGTGTCTNCGGATGGCACTGTTAAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E346362" ref_strand="+" ref_description="SGN-E346362 	[cTOF-23-I15]">
      <seq>cactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatantatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81063" stop="83261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81363" g_stop="81664" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82961" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="605" r_length="303" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E346362" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81363" e_stop="81664"/>
          <exon e_start="82660" e_stop="82961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATA-TATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCC</genome_strand>
        <mrna_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATANTATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E283365" ref_strand="+" ref_description="SGN-E283365 	[cLER-12-O11]">
      <seq>cactttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81063" stop="83235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81363" g_stop="81664" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82935" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="578" r_length="276" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E283365" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E283365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81363" e_stop="81664"/>
          <exon e_start="82660" e_stop="82935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAG</genome_strand>
        <mrna_strand>CACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E348293" ref_strand="+" ref_description="SGN-E348293 	[cTOF-27-H5]">
      <seq>actttctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81064" stop="83385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81364" g_stop="81664" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83085" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="727" r_length="426" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E348293" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348293" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81364" e_stop="81664"/>
          <exon e_start="82660" e_stop="83085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAG</genome_strand>
        <mrna_strand>ACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E578836" ref_strand="+" ref_description="SGN-E578836 	[85958]">
      <seq>taatctaacaaagcagaagcagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagtccttgtgccatcatacagaggttcatcttccttgaacccaaagggacggggtggatctactggcttatgacaacgcctgtttgcattgcctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81068" stop="83500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81365" g_stop="81664" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83200" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="842" r_length="543" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E578836" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81365" e_stop="81664"/>
          <exon e_start="82660" e_stop="83200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTG-ACCCAAAGGGACGAGGTGGATCTACTGGC-TATGACAACG-CTG-TTGCATTGCCTGCTG</genome_strand>
        <mrna_strand>TAATCTAACAAAGCAGAAGCAGAGAGGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAG-TCCTTGTGCCATCATACAGAGGTTCAT-CTTCCTTGAACCCAAAGGGACGGGGTGGATCTACTGGCTTATGACAACGCCTGTTTGCATTGCCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E281354" ref_strand="+" ref_description="SGN-E281354 	[cLEL-1-J4]">
      <seq>gcacgagacaaagcagaaacagagaggaacacaagacatttgatcaacagggaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81069" stop="83065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81366" g_stop="81664" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82765" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="406" r_length="106" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E281354" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E281354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81366" e_stop="81664"/>
          <exon e_start="82660" e_stop="82765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTA-ACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCA</genome_strand>
        <mrna_strand>GCACGAGACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAGGGAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E285454" ref_strand="+" ref_description="SGN-E285454 	[cLES-10-O11]">
      <seq>tctaacaaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagcgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagtttcaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81068" stop="83046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81368" g_stop="81664" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82746" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="384" r_length="87" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E285454" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81368" e_stop="81664"/>
          <exon e_start="82660" e_stop="82746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACT</genome_strand>
        <mrna_strand>TCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGCGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTTCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E445106" ref_strand="+" ref_description="SGN-E445106 	[cSTA-44-N1]">
      <seq>caaagcagaaacagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81073" stop="83089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81373" g_stop="81664" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82789" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="421" r_length="130" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E445106" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E445106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81373" e_stop="81664"/>
          <exon e_start="82660" e_stop="82789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTG</genome_strand>
        <mrna_strand>CAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E347667" ref_strand="+" ref_description="SGN-E347667 	[cTOF-26-L14]">
      <seq>aaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgntaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81074" stop="83349"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81374" g_stop="81664" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83049" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="681" r_length="390" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E347667" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81374" e_stop="81664"/>
          <exon e_start="82660" e_stop="83049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTC</genome_strand>
        <mrna_strand>AAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGNTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E342732" ref_strand="+" ref_description="SGN-E342732 	[cTOF-7-I17]">
      <seq>aaagcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagaagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggactgttttaaagttgaggagaaagatggaattgattatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81074" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81374" g_stop="81664" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="644" r_length="353" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E342732" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81374" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAG-AGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGG-CACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>AAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGACTGTTTTAAAGTTGAGGAGAAAGATGGAATTGATTATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E290650" ref_strand="+" ref_description="SGN-E290650 	[cLET-10-C9]">
      <seq>ggcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcacgcaggcttacttgctctttgcaaactgaaatcaaggaattggctcacaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctaaacgtctcgggagcaaatgcggaaggagttacaaaacgcttaacctatgatgaaatccaaagcaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgctggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81077" stop="83314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81376" g_stop="81664" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83014" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="644" r_length="355" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E290650" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81376" e_stop="81664"/>
          <exon e_start="82660" e_stop="83014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTA</genome_strand>
        <mrna_strand>GGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCACGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCACAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTAAACGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTACAAAACGCTTAACCTATGATGAAATCCAAAGCAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGCTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E588991" ref_strand="+" ref_description="SGN-E588991 	[42555]">
      <seq>agcagaagcagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagcttttgccttcaaaccacgcaaaatacacttgcaagaaatttctgctagagcccacatcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81076" stop="83144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81376" g_stop="81664" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82844" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="475" r_length="187" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E588991" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E588991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81376" e_stop="81664"/>
          <exon e_start="82660" e_stop="82844"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGC-TTTGCCTTCAAACCAGGC-AAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATT</genome_strand>
        <mrna_strand>AGCAGAAGCAGAGAGGAACACAAGACATTTGATCAAGAAA-AAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTTGCCTTCAAACCACGCAAAATACACTTGCAAGAAATTTCTGCTAGAGCCCACATCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E460682" ref_strand="+" ref_description="SGN-E460682 	[cPRO-32-E3]">
      <seq>gcagaaacagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgangggccattcgaagtgtctcctgatgggactgntaagtttgaggagaaaggatgaaattgatatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81077" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81377" g_stop="81664" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="638" r_length="351" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E460682" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E460682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81377" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAG-AAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>GCAGAAACAGAGAGGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGANGGGCCATTCGAAGTGTCTCCTGATGGGACTGNTAAGTTTGAGGAGAAAGGATGAAATTGA-TATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E345432" ref_strand="+" ref_description="SGN-E345432 	[cTOF-13-J5]">
      <seq>gcagaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattganggaccatttgaagtgtctncggatggcactgttaaagttgaggagaaagatggaattgattatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81077" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81377" g_stop="81664" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="639" r_length="351" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E345432" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81377" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>GCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGANGGACCATTTGAAGTGTCTNCGGATGGCACTGTTAAAGTTGAGGAGAAAGATGGAATTGATTATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E372422" ref_strand="+" ref_description="SGN-E372422 	[TUS-32-G24]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83017" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="644" r_length="358" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E372422" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372422" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="83017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAG</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E348785" ref_strand="+" ref_description="SGN-E348785 	[cTOF-29-I12]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgnagggaccatttgaagtgtctccggatggctggnttaagtttgaggagaaagatggaattgattatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83008" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="636" r_length="350" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E348785" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="83008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTG-AGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTG</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGNAGGGACCATTTGAAGTGTCTCCGGATGGCTGGNTTAAGTTTGAGGAGAAAGATGGAATTGATTATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E289376" ref_strand="+" ref_description="SGN-E289376 	[cLET-3-C7]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagggtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83007" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="634" r_length="348" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E289376" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289376" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="83007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCT</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGGGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E285106" ref_strand="+" ref_description="SGN-E285106 	[cLER-20-E17]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcacttgtaagtttgagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83285"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82985" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="612" r_length="326" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E285106" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="82985"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGA</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTTGTAAGTTTGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E295529" ref_strand="+" ref_description="SGN-E295529 	[cLET-23-F1]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82958" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="585" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E295529" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="82958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTC</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E285066" ref_strand="+" ref_description="SGN-E285066 	[cLER-19-H8]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82935" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="562" r_length="276" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E285066" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="82935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAG</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E282454" ref_strand="+" ref_description="SGN-E282454 	[cLER-18-G17]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82847" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="474" r_length="188" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E282454" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E282454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="82847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCAC</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E292684" ref_strand="+" ref_description="SGN-E292684 	[cLET-11-K24]">
      <seq>agaaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81079" stop="83112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81379" g_stop="81664" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82812" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="439" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E292684" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>439</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81379" e_stop="81664"/>
          <exon e_start="82660" e_stop="82812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</genome_strand>
        <mrna_strand>AGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E347962" ref_strand="+" ref_description="SGN-E347962 	[cTOF-31-P7]">
      <seq>aaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgnnntaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatcctttcttgaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81081" stop="83447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81381" g_stop="81664" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83147" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="775" r_length="491" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E347962" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81381" e_stop="81664"/>
          <exon e_start="82660" e_stop="83147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTG--TTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCC</genome_strand>
        <mrna_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGNNNTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTTCTTGACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E293959" ref_strand="+" ref_description="SGN-E293959 	[cLET-13-D21]">
      <seq>aaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcacttgtaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81081" stop="83347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81381" g_stop="81664" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83047" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="673" r_length="389" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E293959" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81381" e_stop="81664"/>
          <exon e_start="82660" e_stop="83047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCT</genome_strand>
        <mrna_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTTGTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E279051" ref_strand="+" ref_description="SGN-E279051 	[cLEL-4-I17]">
      <seq>gcacgagggaacacaagacattttatcaacaaaaaaaggggtaaagggatggttgcctctctacaagcacccgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcataaatgtactgatgctgccaagattgctggttttgctcttgccacctatgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81084" stop="83239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81381" g_stop="81664" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82711" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="334" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82712" i_stop="82894" i_length="183">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82895" g_stop="82939" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="379" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E279051" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81381" e_stop="81664"/>
          <exon e_start="82660" e_stop="82711"/>
          <exon e_start="82895" e_stop="82939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTG</genome_strand>
        <mrna_strand>GCAC-GAG-GGAACACAAGACATTTTATCAACAAAAAAAGGGGTAAAGGGATGGTTGCCTCTCTACAAGCACCCGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCATAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTATGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAA.......................................................................................................................................................................................AAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E297918" ref_strand="+" ref_description="SGN-E297918 	[cLET-38-M24]">
      <seq>aaacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81081" stop="83112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81381" g_stop="81664" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82812" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="437" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E297918" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81381" e_stop="81664"/>
          <exon e_start="82660" e_stop="82812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</genome_strand>
        <mrna_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E279161" ref_strand="+" ref_description="SGN-E279161 	[cLEL-4-N23]">
      <seq>gcacgagggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81084" stop="83006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81381" g_stop="81664" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82706" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="329" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E279161" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81381" e_stop="81664"/>
          <exon e_start="82660" e_stop="82706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAAT</genome_strand>
        <mrna_strand>GCAC-GAG-GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E469006" ref_strand="+" ref_description="SGN-E469006 	[cSTB-10-I23]">
      <seq>gagagagaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaaccaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttaccttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81083" stop="83237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81382" g_stop="81664" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82937" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="562" r_length="278" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E469006" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81382" e_stop="81664"/>
          <exon e_start="82660" e_stop="82937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAA-CAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTA-CTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGAT</genome_strand>
        <mrna_strand>GAGAGAGAGGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACCAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACCTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E324836" ref_strand="+" ref_description="SGN-E324836 	[cTOC-11-C18]">
      <seq>aacagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81082" stop="83112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81382" g_stop="81664" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82812" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="436" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E324836" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81382" e_stop="81664"/>
          <exon e_start="82660" e_stop="82812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</genome_strand>
        <mrna_strand>AACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E327601" ref_strand="+" ref_description="SGN-E327601 	[cTOC-20-D11]">
      <seq>agagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactattgatgagattganggaccatttgaagtgtctccggatggcactggtaagtttgaggagaaggatggaattgattatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81083" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81383" g_stop="81664" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="633" r_length="351" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E327601" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81383" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>AGAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTATTGATGAGATTGANGGACCATTTGAAGTGTCTCCGGATGGCACTGGTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E203368" ref_strand="+" ref_description="SGN-E203368 	[cLEB-3-P21]">
      <seq>gcacgaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaagaagtggtggcaactttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcaaccccagacttccaaaaaaaccaagctcatgacacgcttaacctacacttctgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81088" stop="83235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81383" g_stop="81664" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82935" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="558" r_length="277" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E203368" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81383" e_stop="81664"/>
          <exon e_start="82660" e_stop="82935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAG</genome_strand>
        <mrna_strand>GCAC-GAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAAGAAGTGGTGGCAACTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAACCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTTCTGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E277799" ref_strand="+" ref_description="SGN-E277799 	[cLEL-5-G17]">
      <seq>gcacgagaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgnctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaagggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatgggaagtaaagggaactggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81088" stop="83046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81383" g_stop="81664" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82746" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="370" r_length="89" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E277799" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277799" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81383" e_stop="81664"/>
          <exon e_start="82660" e_stop="82746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTG-CTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAA-GGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATAT-GGAAGTAAAGGGAACTGGAACT</genome_strand>
        <mrna_strand>GCAC-GAG-AACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGNCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGGAAGTAAAGGGAACTGGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E291476" ref_strand="+" ref_description="SGN-E291476 	[cLET-2-L23]">
      <seq>cagagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaagggtcaagcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaattcaaagtaagacatatatggcagtaaagggaactggaactgctaaccaatgtcctaccattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81084" stop="83068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81384" g_stop="81664" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82768" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="390" r_length="109" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E291476" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81384" e_stop="81664"/>
          <exon e_start="82660" e_stop="82768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTG</genome_strand>
        <mrna_strand>CAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGGTCAAGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATTCAAAGTAAGACATATATGGCAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E344402" ref_strand="+" ref_description="SGN-E344402 	[cTOF-14-G13]">
      <seq>agagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgntaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81085" stop="83385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81385" g_stop="81664" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83085" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="706" r_length="426" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E344402" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81385" e_stop="81664"/>
          <exon e_start="82660" e_stop="83085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAG</genome_strand>
        <mrna_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGNTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E318185" ref_strand="+" ref_description="SGN-E318185 	[cTOA-29-B17]">
      <seq>agagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggncaactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctnggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81085" stop="83381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81385" g_stop="81664" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83081" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="705" r_length="425" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E318185" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81385" e_stop="81664"/>
          <exon e_start="82660" e_stop="83081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGG-C-ACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCT-GGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGG</genome_strand>
        <mrna_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGNCAACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTNGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E340035" ref_strand="+" ref_description="SGN-E340035 	[cTOF-3-K24]">
      <seq>agagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggactgggttaagtttgaggagaaggatggaattgattatgctgctgttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81085" stop="83315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81385" g_stop="81664" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83015" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="637" r_length="357" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E340035" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81385" e_stop="81664"/>
          <exon e_start="82660" e_stop="83015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGG-CACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTAC</genome_strand>
        <mrna_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGACTGGGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E313503" ref_strand="+" ref_description="SGN-E313503 	[cTOA-12-G19]">
      <seq>agagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcaaaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcggcgactcgggagcaaatgcggaacgagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggagctgctaaccaatgtcctaccattgaaggacgtgttggcagctatgacttcaaaccacgcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagatggtgtcaacaagaactcacccccagacttgcaaaaaaaccaagctcatgacacgcttaacctacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81085" stop="83226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81385" g_stop="81664" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82926" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="548" r_length="268" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E313503" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81385" e_stop="81664"/>
          <exon e_start="82660" e_stop="82926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTT-CCAAAAAACCAAGCTCATGACACGCTTAACCTACACT</genome_strand>
        <mrna_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAAAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGGCGACTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAACGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAGCTGCTAACCAATGTCCTACCATTGAAGGACGTGTTGGCAGCTATGACTTCAAACCACGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGATGGTGTCAACAAGAACTCACCCCCAGACTTGCAAAAAAACCAAGCTCATGACACGCTTAACCTACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E283197" ref_strand="+" ref_description="SGN-E283197 	[cLER-17-N19]">
      <seq>agagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81085" stop="83151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81385" g_stop="81664" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82851" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="472" r_length="192" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E283197" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E283197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81385" e_stop="81664"/>
          <exon e_start="82660" e_stop="82851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTC</genome_strand>
        <mrna_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E347832" ref_strand="+" ref_description="SGN-E347832 	[cTOF-26-J20]">
      <seq>agagaggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaggttcaagcaggcttatttgctctttgcaaactgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81085" stop="81884"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81385" g_stop="81584" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E347832" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>200</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81385" e_stop="81584"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAA</genome_strand>
        <mrna_strand>AGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAAC-AGGTTCAAGCAGGCTTATTTGCTCTTTGCAAACTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E277903" ref_strand="+" ref_description="SGN-E277903 	[cLEL-5-L3]">
      <seq>gcacgagcacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatattgggaagtaaagggaactggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81387" g_stop="81664" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="278" r_length="278" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82746" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="365" r_length="87" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E277903" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277903" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81387" e_stop="81664"/>
          <exon e_start="82660" e_stop="82746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACT</genome_strand>
        <mrna_strand>GCACGAGCACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATTGGGAAGTAAAGGGAACTGGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E467571" ref_strand="+" ref_description="SGN-E467571 	[cSTB-49-M6]">
      <seq>gaggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcacttgtaagtttgaggagaaggatggaattgattatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81088" stop="83310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81388" g_stop="81664" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83010" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="627" r_length="351" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E467571" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81388" e_stop="81664"/>
          <exon e_start="82660" e_stop="83010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</genome_strand>
        <mrna_strand>GAGGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTTGTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E322706" ref_strand="+" ref_description="SGN-E322706 	[cTOB-26-P11]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattganggaccatttgaagtgtctccggatggccactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81664" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83030" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="648" r_length="372" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E322706" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322706" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81664"/>
          <exon e_start="82660" e_stop="83030"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGG-CACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGG</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGANGGACCATTTGAAGTGTCTCCGGATGGCCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E317326" ref_strand="+" ref_description="SGN-E317326 	[cTOA-28-A13]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgntacagttcagcttcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81664" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83029" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="646" r_length="370" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E317326" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81664"/>
          <exon e_start="82660" e_stop="83029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTG</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGNTACAGTTCAGCTTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E320809" ref_strand="+" ref_description="SGN-E320809 	[cTOB-27-I24]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaacaagctcatgacacgcttaacctacactcttgatgagattgaaggaccattttaagtgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81664" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82958" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="575" r_length="299" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E320809" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320809" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81664"/>
          <exon e_start="82660" e_stop="82958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTC</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAAGGACCATTTTAAGTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E312065" ref_strand="+" ref_description="SGN-E312065 	[cTOA-11-O7]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81664" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82932" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="549" r_length="273" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E312065" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81664"/>
          <exon e_start="82660" e_stop="82932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGAT</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E299297" ref_strand="+" ref_description="SGN-E299297 	[cLET-43-L19]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81664" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82850" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="467" r_length="191" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E299297" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81664"/>
          <exon e_start="82660" e_stop="82850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E331225" ref_strand="+" ref_description="SGN-E331225 	[cTOD-6-C16]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81664" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82850" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="467" r_length="191" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E331225" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331225" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81664"/>
          <exon e_start="82660" e_stop="82850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E471581" ref_strand="+" ref_description="SGN-E471581 	[cSTB-24-D13]">
      <seq>aggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="83069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81664" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82769" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="385" r_length="110" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E471581" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E471581" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81664"/>
          <exon e_start="82660" e_stop="82769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGA</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E291215" ref_strand="+" ref_description="SGN-E291215 	[cLET-2-E24]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggctggtgttagaaacaacctgcagttgaggtctgctgaaagagtgagcaaagcatttggtgttgaacaaggttcatgcaggcttacttgctctttgcaagctgaaatcattgaattggctcagaaatgtactgatgctgccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="81921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81621" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E291215" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>233</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAA</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGCTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTGAAAGAGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCATGCAGGCTTACTTGCTCTTTGCAAGCTGAAATCATTGAATTGGCTCAGAAATGTACTGATGCTGCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E291497" ref_strand="+" ref_description="SGN-E291497 	[cLET-2-P12]">
      <seq>aggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaagggtcaggcaggcttacttgctctttgcaaactgaaatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81089" stop="81887"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81389" g_stop="81587" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E291497" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>199</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291497" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81389" e_stop="81587"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCA</genome_strand>
        <mrna_strand>AGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGGTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E413434" ref_strand="+" ref_description="SGN-E413434 	[STM-17-L8]">
      <seq>ggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcangaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgaggggccattcgaagtgtctcctgatggcactgtaagtttgaggagaaggatggaattgattatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81390" g_stop="81664" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83008" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="622" r_length="348" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E413434" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81390" e_stop="81664"/>
          <exon e_start="82660" e_stop="83008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTG</genome_strand>
        <mrna_strand>GGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCANGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGGCCATTCGAAGTGTCTCCTGATGGCACTG-TAAGTTTGAGGAGAAGGATGGAATTGATTATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E465179" ref_strand="+" ref_description="SGN-E465179 	[cPRO-20-G12]">
      <seq>ggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgaggggccattcgaagtgtctcctgatggcactgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81390" g_stop="81664" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82973" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="588" r_length="314" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E465179" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>589</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81390" e_stop="81664"/>
          <exon e_start="82660" e_stop="82973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGT</genome_strand>
        <mrna_strand>GGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGGCCATTCGAAGTGTCTCCTGATGGCACTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E474501" ref_strand="+" ref_description="SGN-E474501 	[cSTB-36-B6]">
      <seq>ggaacacaggacgatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81390" g_stop="81664" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82937" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="553" r_length="278" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E474501" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81390" e_stop="81664"/>
          <exon e_start="82660" e_stop="82937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACAAGAC-ATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGAT</genome_strand>
        <mrna_strand>GGAACACAGGACGATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E414797" ref_strand="+" ref_description="SGN-E414797 	[STM-20-M11]">
      <seq>ggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81390" g_stop="81664" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82855" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="470" r_length="196" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E414797" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E414797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81390" e_stop="81664"/>
          <exon e_start="82660" e_stop="82855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGG</genome_strand>
        <mrna_strand>GGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E404992" ref_strand="+" ref_description="SGN-E404992 	[PPC-16-G13]">
      <seq>ggaacacaagacatttgatcaagaaaaaaggggtaaaattacggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaagttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaagagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgnaagaagtgttggcagctttgccttcaaaccaggcaaatacactgccaataaattctgcctagaagccacatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81390" g_stop="81664" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82843" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="458" r_length="184" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E404992" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81390" e_stop="81664"/>
          <exon e_start="82660" e_stop="82843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCAT</genome_strand>
        <mrna_strand>GGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTACGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAAGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAAGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGNAAGAAGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAATAAATTCTGCCTAGAAGCCACATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E332968" ref_strand="+" ref_description="SGN-E332968 	[cTOD-19-N3]">
      <seq>ggaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81390" g_stop="81664" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82812" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="428" r_length="153" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E332968" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332968" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81390" e_stop="81664"/>
          <exon e_start="82660" e_stop="82812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</genome_strand>
        <mrna_strand>GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E472142" ref_strand="+" ref_description="SGN-E472142 	[cSTB-27-N9]">
      <seq>ggaacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81390" g_stop="81664" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82768" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="383" r_length="109" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E472142" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E472142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81390" e_stop="81664"/>
          <exon e_start="82660" e_stop="82768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTG</genome_strand>
        <mrna_strand>GGAACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E332705" ref_strand="+" ref_description="SGN-E332705 	[cTOD-18-I19]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaangatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttccctctcactatcaaacagcttgtgggcagcggcaaagcagaaagctttaatggtgagttccttgtgccatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83120" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="735" r_length="461" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E332705" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="83120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATC</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAANGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCCTCTCACTATCAAACAGCTTGTGGGCAGCGGCAAAGCAGAAAGCTTTAATGGTGAGTTCCTTGTGCCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E284495" ref_strand="+" ref_description="SGN-E284495 	[cLER-16-P4]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83006" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="621" r_length="347" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E284495" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284495" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="83006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGC</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E289066" ref_strand="+" ref_description="SGN-E289066 	[cLES-18-M17]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83258"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82958" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="573" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E289066" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTC</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E290761" ref_strand="+" ref_description="SGN-E290761 	[cLET-10-N15]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82937" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="552" r_length="278" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E290761" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGAT</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E291171" ref_strand="+" ref_description="SGN-E291171 	[cLET-8-J22]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82851" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="466" r_length="192" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E291171" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291171" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTC</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E295822" ref_strand="+" ref_description="SGN-E295822 	[cLET-25-D18]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaagtgttggcagctttgccttcaaaccaggcaaatacactgccaaaaaattctgcctagagcccacatcattcacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82850" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="465" r_length="191" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E295822" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAAGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAAAAATTCTGCCTAGAGCCCACATCATTCACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E278707" ref_strand="+" ref_description="SGN-E278707 	[cLER-2-C17]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83148"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82848" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="463" r_length="189" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E278707" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACA</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E303816" ref_strand="+" ref_description="SGN-E303816 	[cLEX-4-N7]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaagcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagttagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82768" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="383" r_length="109" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E303816" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303816" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTG</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAAGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTTAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E289425" ref_strand="+" ref_description="SGN-E289425 	[cLET-3-D17]">
      <seq>aaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaagcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaaaattgctggatttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacggttaacctatgatgaaatccaaagtcagacatatatggaagtaaagggaactggaactgctaaccaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81092" stop="83056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82756" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="371" r_length="97" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E289425" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAAT</genome_strand>
        <mrna_strand>AAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAAGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAAATTGCTGGATTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGGTTAACCTATGATGAAATCCAAAGTCAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E297169" ref_strand="+" ref_description="SGN-E297169 	[cLET-29-E16]">
      <seq>gaacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82721" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="336" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E297169" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATA</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E295820" ref_strand="+" ref_description="SGN-E295820 	[cLET-25-D14]">
      <seq>gaacacaagacatttgatcaacataaaaaggggtaaaattatggctgcctctgtgcaagcggctgctactcttatgcaaccgacaaaagttggtgttagaaacaacctgcagttgaagtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaagcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="83009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82709" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="324" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E295820" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>324</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
          <exon e_start="82660" e_stop="82709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCA</genome_strand>
        <mrna_strand>GAACACAAGACATTTGATCAACATAAAAAGGGGTAAAATTATGGCTGCCTCTGTGCAAGCGGCTGCTACTCTTATGCAACCGACAAAAGTTGGTGTTAGAAACAACCTGCAGTTGAAGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAAGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E295781" ref_strand="+" ref_description="SGN-E295781 	[cLET-25-I4]">
      <seq>gaacacacgacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggatcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccaccttgtggcctcgtcgtttctggagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81091" stop="81950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81391" g_stop="81664" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E295781" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81391" e_stop="81664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACC-TCTGCCCTCGTCGTCTCG</genome_strand>
        <mrna_strand>GAACACACGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGATCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTTGTGGCCTCGTCGTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E467630" ref_strand="+" ref_description="SGN-E467630 	[cSTB-1-I22]">
      <seq>cgaggaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagccagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81097" stop="83174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81392" g_stop="81664" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82874" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="488" r_length="215" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E467630" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81392" e_stop="81664"/>
          <exon e_start="82660" e_stop="82874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAG-CAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAA</genome_strand>
        <mrna_strand>CGAGGAAGACATTTGATCAAGA-AAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E287659" ref_strand="+" ref_description="SGN-E287659 	[cLES-9-G12]">
      <seq>aacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81092" stop="83069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81392" g_stop="81664" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82769" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="383" r_length="110" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E287659" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E287659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81392" e_stop="81664"/>
          <exon e_start="82660" e_stop="82769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGA</genome_strand>
        <mrna_strand>AACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E473183" ref_strand="+" ref_description="SGN-E473183 	[cSTB-31-M22]">
      <seq>aacacaagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81092" stop="83045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81392" g_stop="81664" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82745" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="358" r_length="86" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E473183" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E473183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81392" e_stop="81664"/>
          <exon e_start="82660" e_stop="82745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAAC</genome_strand>
        <mrna_strand>AACACAAGACATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E289086" ref_strand="+" ref_description="SGN-E289086 	[cLES-18-E20]">
      <seq>aacacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81092" stop="81904"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81392" g_stop="81604" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E289086" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>213</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81392" e_stop="81604"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAA</genome_strand>
        <mrna_strand>AACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E316340" ref_strand="+" ref_description="SGN-E316340 	[cTOA-25-O17]">
      <seq>acacaagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaaggtcatccttcctttgaccaaagggacgaggtggatctactggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81093" stop="83472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81393" g_stop="81664" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83172" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="785" r_length="513" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E316340" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81393" e_stop="81664"/>
          <exon e_start="82660" e_stop="83172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGC</genome_strand>
        <mrna_strand>ACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAAGGTCATCCTTCCTTTGACCAAAGGGACGAGGTGGATCTACTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E467401" ref_strand="+" ref_description="SGN-E467401 	[cSTB-48-N7]">
      <seq>caagacatttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81096" stop="83150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81396" g_stop="81664" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82850" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="459" r_length="191" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E467401" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81396" e_stop="81664"/>
          <exon e_start="82660" e_stop="82850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</genome_strand>
        <mrna_strand>CAAGACATTTGATCAAGAAA-AAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E313502" ref_strand="+" ref_description="SGN-E313502 	[cTOA-12-G15]">
      <seq>agacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcacgcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagatggtgtcagcaagaactcacccccagacttccaaaaaaaccaagctcatgacacgcttaacctacactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81098" stop="83227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81398" g_stop="81664" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82927" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="536" r_length="269" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E313502" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81398" e_stop="81664"/>
          <exon e_start="82660" e_stop="82927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTC</genome_strand>
        <mrna_strand>AGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCACGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGATGGTGTCAGCAAGAACTCACCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E348347" ref_strand="+" ref_description="SGN-E348347 	[cTOF-27-P10]">
      <seq>gacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagaagggtgtcagcaagaactcagccccagactttcaaaaaaccaagctcatgacacgncttacctacactcttgatgagattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81099" stop="83239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81399" g_stop="81664" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82939" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="547" r_length="281" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E348347" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81399" e_stop="81664"/>
          <exon e_start="82660" e_stop="82939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAG-AGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTG</genome_strand>
        <mrna_strand>GACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAAGGGTGTCAGCAAGAACTCAGCCCCAGACTTTCAAAAAACCAAGCTCATGACACGNCTTACCTACACTCTTGATGAGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E341760" ref_strand="+" ref_description="SGN-E341760 	[cTOF-9-I15]">
      <seq>gtgccgaattcggcacgaggagacatttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggactgnnttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81090" stop="83386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81400" g_stop="81664" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="287" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83086" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="715" r_length="428" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E341760" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81400" e_stop="81664"/>
          <exon e_start="82660" e_stop="83086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGG-CACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGC</genome_strand>
        <mrna_strand>ACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGACTGNNTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E473807" ref_strand="+" ref_description="SGN-E473807 	[cSTB-33-H22]">
      <seq>catttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaacccagcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81101" stop="83232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81401" g_stop="81664" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82932" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="536" r_length="273" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E473807" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E473807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81401" e_stop="81664"/>
          <exon e_start="82660" e_stop="82932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGAT</genome_strand>
        <mrna_strand>CATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCCAGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E346700" ref_strand="+" ref_description="SGN-E346700 	[cTOF-28-D19]">
      <seq>atttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagaagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttantgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtgggtgagttccttgtgccatcatacagaggttcatccttccttgacccaagggacgagggtggatctactggctatgacaacgctgntgcattgcctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81102" stop="83499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81402" g_stop="81664" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82935" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="540" r_length="277" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82936" i_stop="83037" i_length="102">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83038" g_stop="83199" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="703" r_length="163" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E346700" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81402" e_stop="81664"/>
          <exon e_start="82660" e_stop="82935"/>
          <exon e_start="83038" e_stop="83199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAG-AGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGT-GGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGA-GGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</genome_strand>
        <mrna_strand>ATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTANTGAG......................................................................................................CGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCC-AAGGGACGAGGGTGGATCTACTGGCTATGACAACGCTGNTGCATTGCCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E474397" ref_strand="+" ref_description="SGN-E474397 	[cSTB-36-K8]">
      <seq>atttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacccttgccaataaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81102" stop="83122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81402" g_stop="81664" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82822" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="426" r_length="164" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E474397" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81402" e_stop="81664"/>
          <exon e_start="82660" e_stop="82822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC-TGCCAAGAAAT</genome_strand>
        <mrna_strand>ATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACCCTTGCCAATAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E467055" ref_strand="+" ref_description="SGN-E467055 	[cPRO-26-N4]">
      <seq>atttgatcaagaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaagttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttcccaaacgtttaacctatgacgaaatccaaagcaagacatacatggaaataaagggaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81102" stop="83040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81402" g_stop="81664" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82740" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="343" r_length="81" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E467055" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81402" e_stop="81664"/>
          <exon e_start="82660" e_stop="82740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACT</genome_strand>
        <mrna_strand>ATTTGATCAA-GAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAAGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCCAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAATAAAGGGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E333158" ref_strand="+" ref_description="SGN-E333158 	[cTOD-19-J4]">
      <seq>tttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaagtggatctactggctatgacaacgctgttgcattgcctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81103" stop="83499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81403" g_stop="81664" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82711" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="314" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82712" i_stop="82893" i_length="182">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82894" g_stop="83199" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="620" r_length="306" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E333158" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81403" e_stop="81664"/>
          <exon e_start="82660" e_stop="82711"/>
          <exon e_start="82894" e_stop="83199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</genome_strand>
        <mrna_strand>TTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAA......................................................................................................................................................................................AAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAAGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E296814" ref_strand="+" ref_description="SGN-E296814 	[cLET-26-D21]">
      <seq>ttgatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81104" stop="83233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81404" g_stop="81664" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82933" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="535" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E296814" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81404" e_stop="81664"/>
          <exon e_start="82660" e_stop="82933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATG</genome_strand>
        <mrna_strand>TTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E296813" ref_strand="+" ref_description="SGN-E296813 	[cLET-26-D9]">
      <seq>ttgatcaactaaaaaaggggtgaaattatggctggctgtctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgacgactcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81104" stop="83147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81404" g_stop="81664" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82847" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="449" r_length="188" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E296813" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81404" e_stop="81664"/>
          <exon e_start="82660" e_stop="82847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCAC</genome_strand>
        <mrna_strand>TTGATCAACTAAAAAAGGGGTGAAATTATGGCTGGCTGTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGACGACTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E294432" ref_strand="+" ref_description="SGN-E294432 	[cLET-14-M8]">
      <seq>gatcaacaaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcacaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81106" stop="83151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81406" g_stop="81664" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82851" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="451" r_length="192" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E294432" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294432" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81406" e_stop="81664"/>
          <exon e_start="82660" e_stop="82851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTC</genome_strand>
        <mrna_strand>GATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCACAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E344054" ref_strand="+" ref_description="SGN-E344054 	[cTOF-12-N21]">
      <seq>caaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaaccaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagaagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81112" stop="83262"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81412" g_stop="81664" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82962" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="559" r_length="305" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E344054" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81412" e_stop="81664"/>
          <exon e_start="82660" e_stop="82962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAA-CAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAG-AGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCG</genome_strand>
        <mrna_strand>CAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACCAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E266359" ref_strand="+" ref_description="SGN-E266359 	[cLEI-3-K23]">
      <seq>aaaaatgtaacaattttcttctaaccacttttaggcaccctattatatgtctgaaggttttcctttcagagcggtgaagtcctaagctagagaagaaaggttctagtgccaggttgatacctgggactagaatacgaattctatatgtttggaagtcaatattgaaaacaataagatgattattacttcattggagcttagcggggttaagtgaacccaaggaagagcaacagcactggatacatgggaaatatagacatgaagcaggcaagcattgaattagaaaagcaacttaccgagacgacgagggcagaggtggcaagagcaaaaccagcaatcttggcagcatcagtacatttctgagccaattccttgatttcagtttgcaaagagcaagtaagcctgcctgaaccttgttcaacaccaaatgctttgctcacactttgagcagacctcaactgcaggttgtttctaacaccaacctttgtcggttgcataagagtagcagctgcttgtagagaggcagccataattttaccccttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="84449" stop="81113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84149" g_stop="83924" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83923" i_stop="81735" i_length="2189">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81734" g_stop="81413" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="548" r_length="322" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E266359" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84149" e_stop="83924"/>
          <exon e_start="81734" e_stop="81413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATGTAACAATTTTCTTCTAACCACTTTTAGGCACCCTATTATATGTCTGAAGGTTTTCCTTTCAGAGCGGTGAAGTCCTAAGCTAGAGAAGAAAGGTTCTAGTGCCAGGTTGATACCTGGGACTAGAATACGAATTCTATATGTTTGGAAGTCAATATTGAAAACAATAAGATGATTATTACTTCATTGGAGCTTAGCGGGGTTAAGTGAACCCAAGGAAGAGTAAGCATTTATATTGGCTCCTTTGTTCATTTCTCTTGATCAAGTGATTTCTCTCCATCTGTCTGTCCGTTTCTACTGTAGTTGCAAATTTCATCTGCTTTACCCTTGCATGATCTATGATGAACACTCAGTTGTTTGTTACTTAGTAGATATATACTGGTAAGGACCAGCCTTTCCGTGGTGTAAAATCTATTAATAAAAATACTTGATTGAGCTTACCTTTGCTGAACATATTCACTAATTTTGATGATTGTGGAGTCTAAGGGGTATGGATTATCATGAATTTGCTCCTTTCTATGATGACAGTACTTTTTACTTTATCCTGGGTGTATACAAGCATTAGAAGTGTTTATAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTTTTTGGAAGTCTGGGGCTGAGTTCTTGCTGACACCCTCTGCCTTGACTGTGAATGATGTGGGCTCTAGGCAGAATTTCTTGGCAGTGTATTTGCCTGGTTTGAAGGCAAAGCTGCCAACACCTCCTTCAATGGTAGGACATTGGTTAGCAGTTCCAGTTCCCTTTACTTCCATATATGTCTTACTTTGGATTTCATCATAGGTTAAACGTTTTGGAACTCCTTCCGCATTTGCTCCCTGTGTATCCAAGTGTACAAACATTAGAAATTTTTGCATGAGAAACAAGAACAACAACTACTACACCTCAGTCCAAAAGTTGGGGTCGGCTATATGAATTCTCATTGACTATGCTTCTCCATATAAGCTCAACTCATGTCATCATCATACCAAATAAAAGTATGTCTGGAAGTTAGATTTTATATATACCAGTATGTATGACAGAATCTGCAAACTAGTTCATCTTTATAGAACTATTGATGCTTGTCCTGAAATACAGATGATAGCATGAACATCCAGAAATGAGCTAGGAAATTTTGACAAAAGATTGGATAGTCTGATCTTAGTTTTGGAGGTGGCAATGGTAAAGAAGCCTTCTGAAGTATTTTTACGTACTCTCAAAGATATCAAGGCCCTCTATTCCTGATAAAGATATTTGGTAGTTTACTAGTTATGGTTACTTCAAAGAAAGTGATTGACAGTGAATATGAGGCCGACTAGCTTGAAGAACATTTTACCTGCTTTTAGAATTATCGGTATGTCATACTGGTTAGTTAGCATTCATCTCTAGTCCAGTTATAGCCTTTCTTATTATCCTAAATTTAGATGATTGGATTGACACCAAAGGAAACCATAAACTTCATACACAATAGAGGGATATGGCAGTTCATATAATGAATGGAATTCCTCTTTCATCCTATCCTATTCACAGTACTGATCCATTCATAGCTTAAAAGTGGCTTTCTTGCTTTTGTGCCTCCTCGTGATCTAAACTAGTCAGCAGATACACCCCTGCAGCGCGGGGGATCTCACGACATTTTTCATTGGTTTGTCTTGTATTTCTAATCGTTAGTTGTTTAATATCTGGCATGTTGAATTGTATACATAATATGATGGACTTGTTTAGAAAGATCCTAGTTGAATTATATGACTCTGTATTATGCAGGCAACAGCACTGGATACATGGGAAATATAGACATGAAGCAGGCAAGCATTGAATTAGAAAAGCAACTTACCGAGACGACGAGGGCAGAGGTGGCAAGAGCAAAACCAGCAATCTTGGCAGCATCAGTACATTTCTGAGCCAATTCCTTGATTTCAGTTTGCAAAGAGCAAGTAAGCCTGCCTGAACCTTGTTCAACACCAAATGCTTTGCTCACACTTTGAGCAGACCTCAACTGCAGGTTGTTTCTAACACCAACCTTTGTCGGTTGCATAAGAGTAGCAGCTGCTTGTAGAGAGGCAGCCATAATTTTACCCCTTTTTTT</genome_strand>
        <mrna_strand>AAAAATGTAACAATTTTCTTCTAACCACTTTTAGGCACCCTATTATATGTCTGAAGGTTTTCCTTTCAGAGCGGTGAAGTCCTAAGCTAGAGAAGAAAGGTTCTAGTGCCAGGTTGATACCTGGGACTAGAATACGAATTCTATATGTTTGGAAGTCAATATTGAAAACAATAAGATGATTATTACTTCATTGGAGCTTAGCGGGGTTAAGTGAACCCAAGGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCACTGGATACATGGGAAATATAGACATGAAGCAGGCAAGCATTGAATTAGAAAAGCAACTTACCGAGACGACGAGGGCAGAGGTGGCAAGAGCAAAACCAGCAATCTTGGCAGCATCAGTACATTTCTGAGCCAATTCCTTGATTTCAGTTTGCAAAGAGCAAGTAAGCCTGCCTGAACCTTGTTCAACACCAAATGCTTTGCTCACACTTTGAGCAGACCTCAACTGCAGGTTGTTTCTAACACCAACCTTTGTCGGTTGCATAAGAGTAGCAGCTGCTTGTAGAGAGGCAGCCATAATTTTACCCCTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E299323" ref_strand="+" ref_description="SGN-E299323 	[cLET-43-F24]">
      <seq>aaaaaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81113" stop="83087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81413" g_stop="81664" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82787" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="380" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E299323" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E299323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81413" e_stop="81664"/>
          <exon e_start="82660" e_stop="82787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTT</genome_strand>
        <mrna_strand>AAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E348838" ref_strand="+" ref_description="SGN-E348838 	[cTOF-29-P15]">
      <seq>aaaaaaggggtaaaattatggctgcctctctaaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctnaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagaagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggctgnnntttaagtttgaggagaaggatggaattgattatgctgctgntacagttcagcttccctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81114" stop="83385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81414" g_stop="81664" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83085" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="682" r_length="432" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E348838" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348838" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81414" e_stop="81664"/>
          <exon e_start="82660" e_stop="83085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCT-ACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAG-AGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGC--ACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTT-CCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAG</genome_strand>
        <mrna_strand>AAAAAAGGGGTAAAATTATGGCTGCCTCTCTA-AAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTNACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCTGNNNTTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGNTACAGTTCAGCTTCCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E371504" ref_strand="+" ref_description="SGN-E371504 	[TUS-29-F24]">
      <seq>aaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81116" stop="83388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81416" g_stop="81664" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83088" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="678" r_length="429" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E371504" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81416" e_stop="81664"/>
          <exon e_start="82660" e_stop="83088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCA</genome_strand>
        <mrna_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E282935" ref_strand="+" ref_description="SGN-E282935 	[cLER-17-G15]">
      <seq>aaaaggggtaaaattatggctgcctctctacgagcagctgctactcttatgcaaccgacaaaggttggtgttataaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcacgcaggcttacttgctctttgcaaactgaaatcaaggaattgtctcaaaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgacctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81116" stop="83129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81416" g_stop="81664" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82829" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="419" r_length="170" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E282935" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E282935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81416" e_stop="81664"/>
          <exon e_start="82660" e_stop="82829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCT</genome_strand>
        <mrna_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACGAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTATAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCACGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGTCTCAAAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGACCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E280596" ref_strand="+" ref_description="SGN-E280596 	[cLER-1-F21]">
      <seq>aaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81116" stop="83039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81416" g_stop="81664" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82739" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="329" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E280596" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>329</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280596" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81416" e_stop="81664"/>
          <exon e_start="82660" e_stop="82739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAAC</genome_strand>
        <mrna_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E393025" ref_strand="+" ref_description="SGN-E393025 	[TUS-37-G14]">
      <seq>aaaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccgaccaaggttggtgttagaaacaacctgcagttgaggtctgctcaatgtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81116" stop="81965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81416" g_stop="81664" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E393025" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>249</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81416" e_stop="81664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG</genome_strand>
        <mrna_strand>AAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACCAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAATGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E469747" ref_strand="+" ref_description="SGN-E469747 	[cSTB-14-E9]">
      <seq>aaaggggtaaaattatggctgcctctctacaagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81117" stop="83309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81417" g_stop="81664" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83009" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="598" r_length="350" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E469747" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81417" e_stop="81664"/>
          <exon e_start="82660" e_stop="83009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGC</genome_strand>
        <mrna_strand>AAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E279717" ref_strand="+" ref_description="SGN-E279717 	[cLER-5-P3]">
      <seq>taaaattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81124" stop="83416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81424" g_stop="81664" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82711" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="293" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82712" i_stop="82893" i_length="182">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82894" g_stop="83116" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="516" r_length="223" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E279717" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279717" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81424" e_stop="81664"/>
          <exon e_start="82660" e_stop="82711"/>
          <exon e_start="82894" e_stop="83116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGC</genome_strand>
        <mrna_strand>TAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAA......................................................................................................................................................................................AAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E313070" ref_strand="+" ref_description="SGN-E313070 	[cTOA-14-J11]">
      <seq>aattatggctgcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81127" stop="83236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81427" g_stop="81664" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82936" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="515" r_length="277" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E313070" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81427" e_stop="81664"/>
          <exon e_start="82660" e_stop="82936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGA</genome_strand>
        <mrna_strand>AATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E294899" ref_strand="+" ref_description="SGN-E294899 	[cLET-17-I21]">
      <seq>gcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81137" stop="83111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81437" g_stop="81664" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82811" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="380" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E294899" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81437" e_stop="81664"/>
          <exon e_start="82660" e_stop="82811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</genome_strand>
        <mrna_strand>GCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E294900" ref_strand="+" ref_description="SGN-E294900 	[cLET-17-I21]">
      <seq>gcctctctacaagcagctgctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81137" stop="83111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81437" g_stop="81664" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82811" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="380" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E294900" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81437" e_stop="81664"/>
          <exon e_start="82660" e_stop="82811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</genome_strand>
        <mrna_strand>GCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E466599" ref_strand="+" ref_description="SGN-E466599 	[cPRO-25-A10]">
      <seq>caagcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagaaggtgtcagcaagaactcagccccagacttccaaaaaaacaagctcatgacacgtttaacctacactcttgatgagattgangggacattcgaagtgtctcctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81146" stop="83265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81446" g_stop="81664" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82965" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="525" r_length="306" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E466599" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E466599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81446" e_stop="81664"/>
          <exon e_start="82660" e_stop="82965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGAT</genome_strand>
        <mrna_strand>CAAGCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAAGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGANGGGACATTCGAAGTGTCTCCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E467258" ref_strand="+" ref_description="SGN-E467258 	[cSTB-44-E1]">
      <seq>gaattcggcacgaggcaagcagctgttactcttatgcaaccaacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggttcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccttgtgccatcgtacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaatgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaaaccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81146" stop="83658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81447" g_stop="81664" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="234" r_length="218" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82677" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="252" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82678" i_stop="83105" i_length="428">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83106" g_stop="83358" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="505" r_length="253" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E467258" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467258" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81447" e_stop="81664"/>
          <exon e_start="82660" e_stop="82677"/>
          <exon e_start="83106" e_stop="83358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGG</genome_strand>
        <mrna_strand>AAGCAGCTGTTACTCTTATGCAACCAACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGTTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTTGTGCCATCGTACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAATGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAACCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E616323" ref_strand="+" ref_description="SGN-E616323 	[66131]">
      <seq>gcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgaggggccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcaggcttcctggtggtgagcgtgtgcccttcctctttactatccaaacaggtttgtggcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81149" stop="83378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81449" g_stop="81664" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83078" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="639" r_length="423" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E616323" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E616323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81449" e_stop="81664"/>
          <exon e_start="82660" e_stop="83078"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCC-AAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCA-GCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTAT-CAAACA-GCTTGTGGCAAG</genome_strand>
        <mrna_strand>GCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGGCCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCCAAACAGGTTTGTGGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E477473" ref_strand="+" ref_description="SGN-E477473 	[cSTB-48-E18]">
      <seq>gcagctgctactcttatgcaaccaacaaaggttggtgctagaaacaacctgcagttgaggtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81149" stop="83233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81449" g_stop="81664" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82933" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="490" r_length="274" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E477473" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81449" e_stop="81664"/>
          <exon e_start="82660" e_stop="82933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATG</genome_strand>
        <mrna_strand>GCAGCTGCTACTCTTATGCAACCAACAAAGGTTGGTGCTAGAAACAACCTGCAGTTGAGGTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E344293" ref_strand="+" ref_description="SGN-E344293 	[cTOF-16-E14]">
      <seq>ctactcttatgcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81156" stop="83618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81456" g_stop="81664" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82694" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="244" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82695" i_stop="82945" i_length="251">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82946" g_stop="83318" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="617" r_length="373" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E344293" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344293" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81456" e_stop="81664"/>
          <exon e_start="82660" e_stop="82694"/>
          <exon e_start="82946" e_stop="83318"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGG</genome_strand>
        <mrna_strand>CTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAAC...........................................................................................................................................................................................................................................................CATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E287457" ref_strand="+" ref_description="SGN-E287457 	[cLES-9-E19]">
      <seq>gcaaccgacaaaggttggtgttagaaacaacctgcagttgaggtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81166" stop="83111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81466" g_stop="81664" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82811" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="351" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E287457" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E287457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81466" e_stop="81664"/>
          <exon e_start="82660" e_stop="82811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</genome_strand>
        <mrna_strand>GCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E210860" ref_strand="+" ref_description="SGN-E210860 	[cLEC-68-P14]">
      <seq>taagctgataatactatgaataaggttcttttcatttttctccaatgaaaatagaagtctgcagatatcatccactgtgaccatgcttgcgggtgcaactaacaatttagaatttttctctggcacaagctccatgagatatactcatcacaaaggttctacgtcctatccctgtatgcaaaaatgtaacaattttcttctaaccacttttaggcaccctattatatgtctgaaggttttcctttcagagcggtgaagtcctaagctagagaagaaaggttctagtgccaggatgatacctgggactagaataccaattctatatgtttggaaggcaatattgaaaacaataagatgattattacttcattggagcttaccggggttaaatgaacccaacgaagagcaacagcactggatacatgggaaatatagacatgaagcaggcgagcattgaattacaaaagcaacttaccgagactacgagggcagaagtggcaagagcaaaaccagcaatcttggcagcatcagtacatttctgagccaattccttgatttcagtttgcaaagagcaagtaagcctgcctgaagcttgttcaacaccaaatgctttgctcacactttgagcagacctcaactgcaggctgtttctaacaccaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="84628" stop="81178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84328" g_stop="83924" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83923" i_stop="81735" i_length="2189">
            <donor d_prob="0.958" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81734" g_stop="81478" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="662" r_length="257" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E210860" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84328" e_stop="83924"/>
          <exon e_start="81734" e_stop="81478"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGCTGATAATACTATGAAGAAGGTTCTTTTCATTTTTCTCCAAGGAAAATAGAAGTCTGCAGATATCATCCACTGTGACCATGCTTGCGGGTGCAACTAACAATTTAGAATTTTTCGCTGGCACAAGCTCCATGAGATATACTCAGCACAAAGGTTCTACGTCCTATCCCTGTATGCAAAAATGTAACAATTTTCTTCTAACCACTTTTAGGCACCCTATTATATGTCTGAAGGTTTTCCTTTCAGAGCGGTGAAGTCCTAAGCTAGAGAAGAAAGGTTCTAGTGCCAGGTTGATACCTGGGACTAGAATACGAATTCTATATGTTTGGAAGTCAATATTGAAAACAATAAGATGATTATTACTTCATTGGAGCTTAGCGGGGTTAAGTGAACCCAAGGAAGAGTAAGCATTTATATTGGCTCCTTTGTTCATTTCTCTTGATCAAGTGATTTCTCTCCATCTGTCTGTCCGTTTCTACTGTAGTTGCAAATTTCATCTGCTTTACCCTTGCATGATCTATGATGAACACTCAGTTGTTTGTTACTTAGTAGATATATACTGGTAAGGACCAGCCTTTCCGTGGTGTAAAATCTATTAATAAAAATACTTGATTGAGCTTACCTTTGCTGAACATATTCACTAATTTTGATGATTGTGGAGTCTAAGGGGTATGGATTATCATGAATTTGCTCCTTTCTATGATGACAGTACTTTTTACTTTATCCTGGGTGTATACAAGCATTAGAAGTGTTTATAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTTTTTGGAAGTCTGGGGCTGAGTTCTTGCTGACACCCTCTGCCTTGACTGTGAATGATGTGGGCTCTAGGCAGAATTTCTTGGCAGTGTATTTGCCTGGTTTGAAGGCAAAGCTGCCAACACCTCCTTCAATGGTAGGACATTGGTTAGCAGTTCCAGTTCCCTTTACTTCCATATATGTCTTACTTTGGATTTCATCATAGGTTAAACGTTTTGGAACTCCTTCCGCATTTGCTCCCTGTGTATCCAAGTGTACAAACATTAGAAATTTTTGCATGAGAAACAAGAACAACAACTACTACACCTCAGTCCAAAAGTTGGGGTCGGCTATATGAATTCTCATTGACTATGCTTCTCCATATAAGCTCAACTCATGTCATCATCATACCAAATAAAAGTATGTCTGGAAGTTAGATTTTATATATACCAGTATGTATGACAGAATCTGCAAACTAGTTCATCTTTATAGAACTATTGATGCTTGTCCTGAAATACAGATGATAGCATGAACATCCAGAAATGAGCTAGGAAATTTTGACAAAAGATTGGATAGTCTGATCTTAGTTTTGGAGGTGGCAATGGTAAAGAAGCCTTCTGAAGTATTTTTACGTACTCTCAAAGATATCAAGGCCCTCTATTCCTGATAAAGATATTTGGTAGTTTACTAGTTATGGTTACTTCAAAGAAAGTGATTGACAGTGAATATGAGGCCGACTAGCTTGAAGAACATTTTACCTGCTTTTAGAATTATCGGTATGTCATACTGGTTAGTTAGCATTCATCTCTAGTCCAGTTATAGCCTTTCTTATTATCCTAAATTTAGATGATTGGATTGACACCAAAGGAAACCATAAACTTCATACACAATAGAGGGATATGGCAGTTCATATAATGAATGGAATTCCTCTTTCATCCTATCCTATTCACAGTACTGATCCATTCATAGCTTAAAAGTGGCTTTCTTGCTTTTGTGCCTCCTCGTGATCTAAACTAGTCAGCAGATACACCCCTGCAGCGCGGGGGATCTCACGACATTTTTCATTGGTTTGTCTTGTATTTCTAATCGTTAGTTGTTTAATATCTGGCATGTTGAATTGTATACATAATATGATGGACTTGTTTAGAAAGATCCTAGTTGAATTATATGACTCTGTATTATGCAGGCAACAGCACTGGATACATGGGAAATATAGACATGAAGCAGGCAAGCATTGAATTAGAAAAGCAACTTACCGAGACGACGAGGGCAGAGGTGGCAAGAGCAAAACCAGCAATCTTGGCAGCATCAGTACATTTCTGAGCCAATTCCTTGATTTCAGTTTGCAAAGAGCAAGTAAGCCTGCCTGAACCTTGTTCAACACCAAATGCTTTGCTCACACTTTGAGCAGACCTCAACTGCAGGTTGTTTCTAACACCAACC</genome_strand>
        <mrna_strand>TAAGCTGATAATACTATGAATAAGGTTCTTTTCATTTTTCTCCAATGAAAATAGAAGTCTGCAGATATCATCCACTGTGACCATGCTTGCGGGTGCAACTAACAATTTAGAATTTTTCTCTGGCACAAGCTCCATGAGATATACTCATCACAAAGGTTCTACGTCCTATCCCTGTATGCAAAAATGTAACAATTTTCTTCTAACCACTTTTAGGCACCCTATTATATGTCTGAAGGTTTTCCTTTCAGAGCGGTGAAGTCCTAAGCTAGAGAAGAAAGGTTCTAGTGCCAGGATGATACCTGGGACTAGAATACCAATTCTATATGTTTGGAAGGCAATATTGAAAACAATAAGATGATTATTACTTCATTGGAGCTTACCGGGGTTAAATGAACCCAACGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCACTGGATACATGGGAAATATAGACATGAAGCAGGCGAGCATTGAATTACAAAAGCAACTTACCGAGACTACGAGGGCAGAAGTGGCAAGAGCAAAACCAGCAATCTTGGCAGCATCAGTACATTTCTGAGCCAATTCCTTGATTTCAGTTTGCAAAGAGCAAGTAAGCCTGCCTGAAGCTTGTTCAACACCAAATGCTTTGCTCACACTTTGAGCAGACCTCAACTGCAGGCTGTTTCTAACACCAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E254749" ref_strand="+" ref_description="SGN-E254749 	[cLEG-33-E7]">
      <seq>caacctgcagttgaagtctgctcaaagtgtgagcaaagcatttggtgttgaacaaggttcaagcaggcttacttgctctttgcaaactgaaatcaaagaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaagcagaaggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgntaagtttgaggagaaagatggaattgattatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81193" stop="83308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81493" g_stop="81664" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83008" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="521" r_length="349" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E254749" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81493" e_stop="81664"/>
          <exon e_start="82660" e_stop="83008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTG</genome_strand>
        <mrna_strand>CAACCTGCAGTTGAAGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAAGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAAGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAAGCAGAAGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGNTAAGTTTGAGGAGAAAGATGGAATTGATTATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E400549" ref_strand="+" ref_description="SGN-E400549 	[PPC-1-K10]">
      <seq>gtctgttcaaagtgtgagcaaagcatttggtgttgaacaaggttcagccaggctttacttgctctttgcaacctgaaatcaaggaattggctcagaaatgtacctgatgctgccaagattgctggttttgctcttgccacctctgcccttcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggnagggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaagggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatnacacgtttaacctacactcttgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81208" stop="83235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81508" g_stop="81664" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="82935" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="439" r_length="279" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E400549" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81508" e_stop="81664"/>
          <exon e_start="82660" e_stop="82935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGC-TTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTA-CTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCC-TCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGG-A-GGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAA-GGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAG</genome_strand>
        <mrna_strand>GTCTGTTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGCCAGGCTTTACTTGCTCTTTGCAACCTGAAATCAAGGAATTGGCTCAGAAATGTACCTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGNAGGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATNACACGTTTAACCTACACTCTTGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E253616" ref_strand="+" ref_description="SGN-E253616 	[cLEG-32-M15]">
      <seq>tctgcttaaagtgtgagcaaagcttttggtgttgaacaaggttcatgcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81209" stop="83379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81509" g_stop="81664" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83079" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="576" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E253616" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81509" e_stop="81664"/>
          <exon e_start="82660" e_stop="83079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGC</genome_strand>
        <mrna_strand>TCTGCTTAAAGTGTGAGCAAAGCTTTTGGTGTTGAACAAGGTTCATGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E255968" ref_strand="+" ref_description="SGN-E255968 	[cLEG-35-E8]">
      <seq>tctgctcaaagtgtgagcaaatcatttggtgtttaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaagagaaggatggaattgattatgctgctgttacagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81209" stop="83320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81509" g_stop="81664" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83020" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="517" r_length="361" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E255968" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255968" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81509" e_stop="81664"/>
          <exon e_start="82660" e_stop="83020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTC</genome_strand>
        <mrna_strand>TCTGCTCAAAGTGTGAGCAAATCATTTGGTGTTTAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAAGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E345499" ref_strand="+" ref_description="SGN-E345499 	[cTOF-18-E23]">
      <seq>tcaaagtgtgagcaaagcatttggtgttgaacaaggttcaggcaggcttacttgctctttgcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgtttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaaggacgagggtggatctactggctatgacaacgctgttgcattgcctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81214" stop="83499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81514" g_stop="81664" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83199" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="692" r_length="541" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E345499" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81514" e_stop="81664"/>
          <exon e_start="82660" e_stop="83199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTG-TTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGA-GGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</genome_strand>
        <mrna_strand>TCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAA-GGACGAGGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E293736" ref_strand="+" ref_description="SGN-E293736 	[cLET-21-P20]">
      <seq>gcttacttgctctttgcaaactgaaatcaaggaattggctcacaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgttgcctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagctagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgtctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttcagtttgaggagaaggatggaattgattatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81259" stop="83308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81559" g_stop="81664" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83008" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="455" r_length="349" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E293736" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81559" e_stop="81664"/>
          <exon e_start="82660" e_stop="83008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTG</genome_strand>
        <mrna_strand>GCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCACAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTTGCCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGCTAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGTCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTCAGTTTGAGGAGAAGGATGGAATTGATTATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E290746" ref_strand="+" ref_description="SGN-E290746 	[cLET-10-H15]">
      <seq>gcaaactgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81274" stop="83379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81574" g_stop="81664" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83079" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="511" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E290746" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81574" e_stop="81664"/>
          <exon e_start="82660" e_stop="83079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGC</genome_strand>
        <mrna_strand>GCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E476017" ref_strand="+" ref_description="SGN-E476017 	[cSTB-43-E21]">
      <seq>ctgaaatcaaggaattggctcagaaatgtactgatgctgccaagattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacacagccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgaggggccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81279" stop="83363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81579" g_stop="81664" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83063" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="491" r_length="405" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E476017" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81579" e_stop="81664"/>
          <exon e_start="82660" e_stop="83063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAA-AAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAA</genome_strand>
        <mrna_strand>CTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACAGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGGCCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E278662" ref_strand="+" ref_description="SGN-E278662 	[cLER-10-L9]">
      <seq>gattgctggttttgctcttgccacctctgccctcgtcgtctcgggagcaaatgcggaaggagttccaaaacgtttaacctatgatgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctattcaatgtgctaccattgaaggaggtgttggcagctttgccttcaaaccagggggtacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctntagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccanagggacgaggtggatctactggctatgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="81322" stop="83479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81622" g_stop="81664" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82660" g_stop="83179" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="562" r_length="519" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E278662" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81622" e_stop="81664"/>
          <exon e_start="82660" e_stop="83179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCGGTAAGTTGCTTTTCTAATTCAATGCTTGCCTGCTTCATGTCTATATTTCCCATGTATCCAGTGCTGTTGCCTGCATAATACAGAGTCATATAATTCAACTAGGATCTTTCTAAACAAGTCCATCATATTATGTATACAATTCAACATGCCAGATATTAAACAACTAACGATTAGAAATACAAGACAAACCAATGAAAAATGTCGTGAGATCCCCCGCGCTGCAGGGGTGTATCTGCTGACTAGTTTAGATCACGAGGAGGCACAAAAGCAAGAAAGCCACTTTTAAGCTATGAATGGATCAGTACTGTGAATAGGATAGGATGAAAGAGGAATTCCATTCATTATATGAACTGCCATATCCCTCTATTGTGTATGAAGTTTATGGTTTCCTTTGGTGTCAATCCAATCATCTAAATTTAGGATAATAAGAAAGGCTATAACTGGACTAGAGATGAATGCTAACTAACCAGTATGACATACCGATAATTCTAAAAGCAGGTAAAATGTTCTTCAAGCTAGTCGGCCTCATATTCACTGTCAATCACTTTCTTTGAAGTAACCATAACTAGTAAACTACCAAATATCTTTATCAGGAATAGAGGGCCTTGATATCTTTGAGAGTACGTAAAAATACTTCAGAAGGCTTCTTTACCATTGCCACCTCCAAAACTAAGATCAGACTATCCAATCTTTTGTCAAAATTTCCTAGCTCATTTCTGGATGTTCATGCTATCATCTGTATTTCAGGACAAGCATCAATAGTTCTATAAAGATGAACTAGTTTGCAGATTCTGTCATACATACTGGTATATATAAAATCTAACTTCCAGACATACTTTTATTTGGTATGATGATGACATGAGTTGAGCTTATATGGAGAAGCATAGTCAATGAGAATTCATATAGCCGACCCCAACTTTTGGACTGAGGTGTAGTAGTTGTTGTTCTTGTTTCTCATGCAAAAATTTCTAATGTTTGTACACTTGGATACACAGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACA</genome_strand>
        <mrna_strand>GATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTATTCAATGTGCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGG-GGGTACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTNTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCANAGGGACGAGGTGGATCTACTGGCTATGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E467569" ref_strand="+" ref_description="SGN-E467569 	[cSTB-49-K18]">
      <seq>aggagttccaaaacgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaataaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagttccttgtgccatcgtacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaatgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82374" stop="83585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82674" g_stop="83285" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="612" r_length="612" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E467569" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467569" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82674" e_stop="83285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTAC</genome_strand>
        <mrna_strand>AGGAGTTCCAAAACGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAATAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCGTACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAATGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E469331" ref_strand="+" ref_description="SGN-E469331 	[cSTB-11-C10]">
      <seq>cgtttaacctatgacgaaatccaaagcaagacatacatggaagtaaagggaactggaactgctaaccagtgccctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaataaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagttccttgtgccatcgtacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaatgctgttgcattgcctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82387" stop="83499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82687" g_stop="83199" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E469331" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82687" e_stop="83199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</genome_strand>
        <mrna_strand>CGTTTAACCTATGACGAAATCCAAAGCAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAGTGCCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAATAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCGTACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAATGCTGTTGCATTGCCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E236555" ref_strand="+" ref_description="SGN-E236555 	[cLED-13-E12]">
      <seq>tgaaatccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82401" stop="83499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82701" g_stop="83199" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="499" r_length="499" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E236555" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236555" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82701" e_stop="83199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</genome_strand>
        <mrna_strand>TGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E290004" ref_strand="+" ref_description="SGN-E290004 	[cLET-5-C5]">
      <seq>ccaaagtaagacatatatggaagtaaagggaactggaactgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcaaccccaaacttccaaaaaaccaagctcatgacacgcttaacctacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82407" stop="83225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82707" g_stop="82925" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E290004" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>219</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290004" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82707" e_stop="82925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACAC</genome_strand>
        <mrna_strand>CCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAACCCCAAACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E340715" ref_strand="+" ref_description="SGN-E340715 	[cTOF-1-N12]">
      <seq>tgctaaccaatgtcctaccattgaaggaggtgttggcagctttgccttcaaaccaggcaaatacactgccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82446" stop="83783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82746" g_stop="83483" g_length="738"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="738" r_length="738" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E340715" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82746" e_stop="83483"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACAT</genome_strand>
        <mrna_strand>TGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E414798" ref_strand="+" ref_description="SGN-E414798 	[STM-20-M11]">
      <seq>caaaatcctttttttgtttcaatgcttgtcctacctccgtcacagaatgtttaaccttgtaacttacaacaaaatttagaccaagaaatgatacacacattctagaactctccatcattcaagttgggcataccagataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaatactccaatgacctcaccagtctctggtttgctctgggtaacactcaaggtgatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccaccccgtccctttgggtcaaggaaggatgaacctctgtatgatggcacaaggaactcaccactaaagctttctggtttgccgcttgccacaagctgtttgatagtaaagaggaagggcacacgctcaccaccaggaagctgaactgtaacagcagcataatcaattccatccttctcctcaaacttaacagtgccatcaggagacacttcgaatggtccctcaatctcatcaagagtgtaggttaaacgtgtcatgagcttggttttttggaagtctggggctgagttcttgctgacaccctctgccttgactgtgaatgatgtgggctctaggcagatttcttggcagtgtatttgcctggtttgaaggcaaagctgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83816" stop="82479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83516" g_stop="82779" g_length="738"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="750" r_length="737" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E414798" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E414798" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83516" e_stop="82779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTTTTTGGAAGTCTGGGGCTGAGTTCTTGCTGACACCCTCTGCCTTGACTGTGAATGATGTGGGCTCTAGGCAGAATTTCTTGGCAGTGTATTTGCCTGGTTTGAAGGCAAAGCTGCCA</genome_strand>
        <mrna_strand>TTGTTTCAATGCTTGTCCTACCTCCGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGTTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCCCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGTTTGCCGCTTGCCACAAGCTGTTTGATAGTAAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCAGGAGACACTTCGAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAACGTGTCATGAGCTTGGTTTTTTGGAAGTCTGGGGCTGAGTTCTTGCTGACACCCTCTGCCTTGACTGTGAATGATGTGGGCTCTAGGCAG-ATTTCTTGGCAGTGTATTTGCCTGGTTTGAAGGCAAAGCTGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E344877" ref_strand="+" ref_description="SGN-E344877 	[cTOF-21-H21]">
      <seq>ccaagaaattctgcctagagcccacatcattcacagtcaaggcagagggtgtcagcaagaactcagccccagacttccaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagtaccaggttaaacattctgtgacccaatttggaccagcactgaaccactatcttgctgtatattatcaagctcaagtatatttcatgctggtagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82514" stop="83865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82814" g_stop="83565" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="749" r_length="749" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E344877" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82814" e_stop="83565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGC</genome_strand>
        <mrna_strand>CCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAG-TACCAGGTTAAACATTCTGTGACCCAATTTGGACCAGCACTG-AACCACTATCTTGCTGTATATTATCAAGCTCAAGT-ATATTTCATGCTGGTAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E371503" ref_strand="+" ref_description="SGN-E371503 	[TUS-29-F24]">
      <seq>tttttttttgataatatacagcaagatagttgtttcagtgcttgtccaaattgggtcacagaatgtttaaccttgtaacttacaacaaaatttagaccaagaaatgatacacacattctagaactctccatcattcaagttgggcataccagataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaatactccaatgacctcaccagtctctggcttgctctgggtaacactcaaggtgatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccacctcgtccctttgggtcaaggaaggatgaacctctgtatgatggcacaaggaactcaccactaaagctttctggcttgccgcttgccacaagctgtttgatagtgaagaggaagggcacacgctcaccaccaggaagctgaactgtaacagcagcataatcaattccatccttctcctcaaacttaacagtgccatccggagacacttcaaatggtccctcaatctcatcaagagtgtaggttaagcgtgtcatgagcttggttttttgggaagtctggggctgagttcttgctgacaccctctgccttgactgtgaatgatgtgggctctaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83838" stop="82526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83545" g_stop="82826" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="721" r_length="721" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E371503" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83545" e_stop="82826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTTTTT-GGAAGTCTGGGGCTGAGTTCTTGCTGACACCCTCTGCCTTGACTGTGAATGATGTGGGCTCTAGGC</genome_strand>
        <mrna_strand>TTTTTTTTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTTTTTGGGAAGTCTGGGGCTGAGTTCTTGCTGACACCCTCTGCCTTGACTGTGAATGATGTGGGCTCTAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E290347" ref_strand="+" ref_description="SGN-E290347 	[cLES-20-O1]">
      <seq>aactcagccccagacttgcaaaaaaccaagctcatgacacgcttaacctacactcttgatgagattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagatcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagattgtggcaagcagcttgccataaagctttagtggtgagttccttgtgccatcatacagaggttcatacttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82573" stop="83508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82873" g_stop="83208" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E290347" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82873" e_stop="83208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGA</genome_strand>
        <mrna_strand>AACTCAGCCCCAGACTTGCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGATCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGATTGTGGCAAGCAGCTTGCCATAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATACTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E571818" ref_strand="+" ref_description="SGN-E571818 	[30874]">
      <seq>cagcaagatagttgtttcaatgcttgtccaaattgagtcacagaatgtttaaccttgtaacttacaacaaaatttagaccaagaaatgatacacacattctagaactctccatcattcaagttgggcataccagataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaatactccaatgacctcaccagtctctggtttgctctgggtaacactcaaggtgatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccaccccgtccctttgggtcaaggaaggatgaacctctgtatgatggcacaaggaactcaccactaaagctttctggtttgccgcttgccacaagctgtttgatagtaaagaggaagggcacacgctcaccaccaggaagctgaactgtaacagcagcataatcaattccatccttctcctcaaacttaacagtgccatcaggagacacttcgaatggtccctcaatctcatcaagagtgtaggttaaacgtgtcatgagcttggtttttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83827" stop="82592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83527" g_stop="82890" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E571818" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E571818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83527" e_stop="82890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTTTTTGG</genome_strand>
        <mrna_strand>CAGCAAGATAGTTGTTTCAATGCTTGTCCAAATTGAGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGTTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCCCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGTTTGCCGCTTGCCACAAGCTGTTTGATAGTAAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCAGGAGACACTTCGAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAACGTGTCATGAGCTTGGTTTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E372421" ref_strand="+" ref_description="SGN-E372421 	[TUS-32-G24]">
      <seq>ttttttttttaactggctaccagcatgaaatattacttgagcttgataatatacagcaagatagttgtttcagtgcttgtccaaattgggtcacagaatgtttaaccttgtaacttacaacaaaatttagaccaagaaatgatacacacattctagaactctccatcattcaagttgggcataccagataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaatactccaatgacctcaccagtctctggcttgctctgggtaacactcaaggtgatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccacctcgtccctttgggtcaaggaaggatgaacctctgtatgatggcacaaggaactcaccactaaagctttctggcttgccgcttgccacaagctgtttgatagtgaagaggaagggcacacgctcaccaccaggaagctgaactgtaacagcagcataatcaattccatccttctcctcaaacttaacagtgccatccggagacacttcaaatggtccctcaatctcatcaagagtgtaggttaagcgtgtcatgagcttggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83877" stop="82595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83580" g_stop="82895" g_length="686"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="686" r_length="686" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E372421" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372421" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83580" e_stop="82895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTGTTTATAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTT</genome_strand>
        <mrna_strand>TTTTTTTTTTAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E578153" ref_strand="-" ref_description="SGN-E578153 	[LE08EH04]">
      <seq>ctcatgacacgcttaacctacactcttgatgagaatgagggaccatttgaagtgtctccggatggcactgttaagtttgagnagaagaatgaaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacaaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttataaacaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82603" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82903" g_stop="83577" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="675" r_length="675" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="676" polyA_stop="699"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E578153" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578153" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82903" e_stop="83577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</genome_strand>
        <mrna_strand>CTCATGACACGCTTAACCTACACTCTTGATGAGAATGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGNAGAAGAATGAAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACAAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E403864" ref_strand="-" ref_description="SGN-E403864 	[PPC-12-A5]">
      <seq>actagttctctcttcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagttccttgtgccatcgtacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaatgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaaaccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgactcaatttggacaaagcattgaaacaactatcttgctgtatattatcaagctcgagtaatattaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82604" stop="83852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82903" g_stop="83544" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="655" r_length="643" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="664" polyA_stop="675"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E403864" ref_strand="-">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E403864" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82903" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGAC-AAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>TTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCGTACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAATGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAACCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACTCAATTTGGACAAAGCATTGAAACAACTATCTTGCTGTATATTATCAAGCTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E433645" ref_strand="-" ref_description="SGN-E433645 	[STM-58-F4]">
      <seq>actagttctctcctcatgacacgtttaacctacactcttgatgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagttccttgtgccatcgtacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaatgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaaaccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgactcaatttggacaaagcattgaaacaactatcttgctgtatattatcaagctcgagtaatatttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82603" stop="83855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82903" g_stop="83544" g_length="642"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="655" r_length="643" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="665" polyA_stop="676"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E433645" ref_strand="-">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E433645" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82903" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGAC-AAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>CTCATGACACGTTTAACCTACACTCTTGATGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCGTACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAATGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAACCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACTCAATTTGGACAAAGCATTGAAACAACTATCTTGCTGTATATTATCAAGCTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E433646" ref_strand="+" ref_description="SGN-E433646 	[STM-58-F4]">
      <seq>tgagattgagggaccattcgaagtgtctcctgatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagttccttgtgccatcgtacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaatgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaaaccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgactcaatttggacaaagcattgaaacaactatcttgctgtatattatcaagctcgagtaatatttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82632" stop="83855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82932" g_stop="83544" g_length="613"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="624" polyA_stop="635"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E433646" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E433646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82932" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGAC-AAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>TGAGATTGAGGGACCATTCGAAGTGTCTCCTGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCGTACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAATGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAACCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACTCAATTTGGACAAAGCATTGAAACAACTATCTTGCTGTATATTATCAAGCTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E371509" ref_strand="-" ref_description="SGN-E371509 	[TUS-29-J6]">
      <seq>gattgagggaccatttgaagtgtctccggatggcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagggtgtgcccttccttttcactatcaaacagcttgtggcaaacggcaagccagaaagctttagtggtgagttccttgtgccatcatacaaaggttcatccttccttgacccaaagggacgaggtggatttactggctatgacaacgctgttgcattgcctgctggagggaaaggagacgaggaggagcttcaaaaggagaacgtaaaaaacactgcatctttaacaggaaagatcaccttgagtgttacccaaagcaaaccaaagactggtgaggtcattggagtatttgaaagcatccagccatttgatactgatttgggggcaaaggttcccaaggatgtcaaaatccagggtatttggtatgcccaacttgaatgatggaaagttttaaaatgtgtgtatcattttttggtttaaattttgttgtaagttacaaggttaaacattttgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82635" stop="83855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82935" g_stop="83544" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="610" r_length="610" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="621" polyA_stop="651"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E371509" ref_strand="-">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371509" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="82935" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>GATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGGGTGTGCCCTTCCTTTTCACTATCAAACAGCTTGTGGCAAACGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAAAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATTTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAAAGGAGACGAGGAGGAGCTTCAAAAGGAGAACGTAAAAAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAAAGCAAACCAAAGACTGGTGAGGTCATTGGAGTATTTGAAAGCATCCAGCCATTTGATACTGATTTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATTTGGTATGCCCAACTTGAATGATGGAAAGTTTTAAAATGTGTGTATCATTTTTTGGTTTAAATTTTGTTGTAAGTTACAAGGTTAAACATTTTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E291357" ref_strand="+" ref_description="SGN-E291357 	[cLET-2-H13]">
      <seq>gagcactgttaagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagaccaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaagttcccaaggatgtcaaaatcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82665" stop="83687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82965" g_stop="83387" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="423" r_length="423" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E291357" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82965" e_stop="83387"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCA</genome_strand>
        <mrna_strand>GAGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACCAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAAGTTCCCAAGGATGTCAAAATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E283628" ref_strand="+" ref_description="SGN-E283628 	[cLES-1-M17]">
      <seq>ttttttctagaactctccatcattcaagttgggcataccatataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaatactccaatgacctcaccagtctctggcttgctctgggtaacactcaaggtgatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgcaacagcgttgtcatagccagtagatccacctcgtccctttgggtcaaggaaggatgaacctctgtatgatggcacaaggaactcaccactaaagctttctggcttgccgcttgccacaagctgtttgatagtgaagaggaagggcacacgctcaccaccaggaagctgaactgtaacagcagcataatcaattccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83730" stop="82691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83434" g_stop="82991" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E283628" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283628" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83434" e_stop="82991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCAT</genome_strand>
        <mrna_strand>TTTTTTCTAGAACTCTCCATCATTCAAGTTGGGCATACCATATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E293739" ref_strand="+" ref_description="SGN-E293739 	[cLET-21-A15]">
      <seq>ggaattgattatgctgctgttacagttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgcaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccaaagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatacaaggtatctggtattgcccaacttgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82693" stop="83714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82993" g_stop="83414" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="423" r_length="423" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E293739" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82993" e_stop="83414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTA-TGCCCAACTTGAATG</genome_strand>
        <mrna_strand>GGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGCAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAAAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATACAAGGTATCTGGTATTGCCCAACTTGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E616734" ref_strand="+" ref_description="SGN-E616734 	[90204]">
      <seq>cagttcagcttcctggtggtgagcgtgtgcccttcctctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagttccttgtgccatcgtacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaatgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaaaccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgactcaatttggacaagcattgaaacaactatcttgctgtatattatcaagctcgagtaatatttcatgctgatagccagttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82715" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83015" g_stop="83581" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E616734" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E616734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83015" e_stop="83581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTC</genome_strand>
        <mrna_strand>CAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCGTACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAATGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAACCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACTCAATTTGGACAAGCATTGAAACAACTATCTTGCTGTATATTATCAAGCTCGAGTAATATTTCATGCTGATAGCCAGTTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E285753" ref_strand="+" ref_description="SGN-E285753 	[cLES-5-M9]">
      <seq>ttcagcttcctggtggtgagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagaccaggaggagcttcagaaggagaacgtcaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccatagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagaggtctagaatgtgtgtatcatttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82718" stop="83747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83018" g_stop="83447" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E285753" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83018" e_stop="83447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTT</genome_strand>
        <mrna_strand>TTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACCAGGAGGAGCTTCAGAAGGAGAACGTCAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCATAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGGTCTAGAATGTGTGTATCATTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E616481" ref_strand="-" ref_description="SGN-E616481 	[66291]">
      <seq>gagcgtgtgcccttcctgctttactatcaaacagcttgtggcaagcggcaaaccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacggggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaaaccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttaacaaggttaaacattctgtgactcaatttggacaagcattgaaacaactatcttgctgtaaaaaaaaaaaaaaaaaaaaaactcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82735" stop="83838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83035" g_stop="83526" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="497" polyA_stop="519"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E616481" ref_strand="-">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E616481" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83035" e_stop="83526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCGTGTGCCCTTCCT-CTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTT-ACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT</genome_strand>
        <mrna_strand>GAGCGTGTGCCCTTCCTGCTTTACTATCAAACAGCTTGTGGCAAGCGGCAAACCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAACCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTAACAAGGTTAAACATTCTGTGACTCAATTTGGACAAGCATTGAAACAACTATCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E348690" ref_strand="+" ref_description="SGN-E348690 	[cTOF-30-B18]">
      <seq>ttcactatcaaacagcttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttataaacaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82753" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83053" g_stop="83588" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E348690" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83053" e_stop="83588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCT</genome_strand>
        <mrna_strand>TTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E203369" ref_strand="-" ref_description="SGN-E203369 	[cLEB-3-P21]">
      <seq>cttgtggcaagcggcaagccagaaagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82768" stop="83838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83068" g_stop="83526" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="459" r_length="459" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="462" polyA_stop="483"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E203369" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203369" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83068" e_stop="83526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT</genome_strand>
        <mrna_strand>CTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E413435" ref_strand="+" ref_description="SGN-E413435 	[STM-17-L8]">
      <seq>cgggcccccctcgagtttttttcactttttttttcgcatgaaatattactctagcttgataatatacagcaagatagttgtttcaatgcttgtccaaattgagtcacagaatgtttaaccttgtaacttacaacaaaatttagaccaagaaatgatacacacattctagaactctccatcattcaagttgggcataccagataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaaatactccaatgacctcaccagtctctggtttgctctgggtaacactcaaggtgatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgcaacagcattgtcatagccagtagatccaccccgtccctttgggtcaaggaaggatgaacctctgtacgatggcacaaggaactcaccactaaagctttctggtttgccgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83858" stop="82776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83557" g_stop="83076" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="519" r_length="483" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E413435" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83557" e_stop="83076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTC-AAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTT</genome_strand>
        <mrna_strand>CATGAAATATTACTCTAGCTTGATAATATACAGCAAGATAGTTGTTTCAATGCTTGTCCAAATTGAGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAAATACTCCAATGACCTCACCAGTCTCTGGTTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCATTGTCATAGCCAGTAGATCCACCCCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTACGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGTTTGCCGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E235122" ref_strand="-" ref_description="SGN-E235122 	[cLEL-6-J17]">
      <seq>aagctttagtggtgagttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctggtgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttataaacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82791" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83091" g_stop="83577" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="488" polyA_stop="504"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E235122" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235122" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83091" e_stop="83577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</genome_strand>
        <mrna_strand>AAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGGTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E219812" ref_strand="+" ref_description="SGN-E219812 	[cLEL-24-M18]">
      <seq>tttttttagaagtgtttatatttggctaccagcatgaaatattacttgagcttgataatatacagcaagatagttgtttcagtgcttgtccaaattgggtcacagaatgtttaaccttgtaacttacaacaaaatttagaccaagaaatgatacacacattctagaactctccatcattcaagttgggcataccagataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaatactccaatgacctcaccagtctctggcttgctctgggtaacactcaaggtgatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtctcctctccctccagcaggcaatgcaacatgcgttgtcatagccagtagatccacctcgtccctttgggtcaaggaaggatgaacctctgtatgatggcacaaggaactcaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83884" stop="82799"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83589" g_stop="83099" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="492" r_length="492" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E219812" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83589" e_stop="83099"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCATTAGAAGTGTTTATAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACA-GCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCAC</genome_strand>
        <mrna_strand>TTTTTTTAGAAGTGTTTATATTTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACATGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E574824" ref_strand="-" ref_description="SGN-E574824 	[34352]">
      <seq>ggtgagttccttgtgccatcatacagaggttcatccttctttgacccaaagggacggggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaaaccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctcgtgactcaatttgagacaagcattgaaacaaaaaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82801" stop="83816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83101" g_stop="83504" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="413" polyA_stop="438"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E574824" ref_strand="-">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574824" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83101" e_stop="83504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCT-GTGACCCAATTTG-GACAA</genome_strand>
        <mrna_strand>GGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCTTTGACCCAAAGGGACGGGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAACCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTCGTGACTCAATTTGAGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E290287" ref_strand="+" ref_description="SGN-E290287 	[cLET-5-H10]">
      <seq>ttccttgtgccatcatacagaggttcatccttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtnnaaaaaaaaaaaaaataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82807" stop="83838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83107" g_stop="83526" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="425" polyA_stop="443"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E290287" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83107" e_stop="83526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT</genome_strand>
        <mrna_strand>TTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E339207" ref_strand="+" ref_description="SGN-E339207 	[cTOF-4-I15]">
      <seq>ttccttgacccaaagggacgaggtggatctactggctatgacaacgctgttgcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82837" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83137" g_stop="83583" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E339207" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83137" e_stop="83583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTA</genome_strand>
        <mrna_strand>TTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E217756" ref_strand="-" ref_description="SGN-E217756 	[cLEL-23-A7]">
      <seq>atgacaacgctgttgcattgcctgctggagggaaaggagacgaggaggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttgtagaatgtgtgaatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82874" stop="83855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83174" g_stop="83544" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="381" polyA_stop="398"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E217756" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217756" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83174" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>ATGACAACGCTGTTGCATTGCCTGCTGGAGGGAAAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTGTAGAATGTGTGAATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E238827" ref_strand="-" ref_description="SGN-E238827 	[cLEL-9-B6]">
      <seq>cgctgttgcattgcctgctggagggagagaagacnaggaggagcttcagaaggagaacgtaaagaaccctgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatattataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82881" stop="83855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83181" g_stop="83544" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="373" polyA_stop="391"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E238827" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238827" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83181" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>CGCTGTTGCATTGCCTGCTGGAGGGAGAGAAGACNAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACCCTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E216275" ref_strand="-" ref_description="SGN-E216275 	[cLEL-13-L22]">
      <seq>gttgcattgcctgctggagggaaaggagacgaggaggagcttcagaaggagaacgtaaagaaccctgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagccctgaaacaactatcttgctgttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82885" stop="83838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83185" g_stop="83526" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="346" polyA_stop="365"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E216275" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E216275" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83185" e_stop="83526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT</genome_strand>
        <mrna_strand>GTTGCATTGCCTGCTGGAGGGAAAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACCCTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCCCTGAAACAACTATCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E234642" ref_strand="-" ref_description="SGN-E234642 	[cLEL-6-J17]">
      <seq>gcattgcctgctggagggagaggagacgaggaggagcttcagaaggagaacgtaaagacacttgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttataaacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82888" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83188" g_stop="83577" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="390" r_length="390" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="391" polyA_stop="407"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E234642" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>390</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E234642" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83188" e_stop="83577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</genome_strand>
        <mrna_strand>GCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGACACTTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E228886" ref_strand="-" ref_description="SGN-E228886 	[cLEL-29-K12]">
      <seq>ggagcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtataaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttataagcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82920" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83220" g_stop="83574" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="355" r_length="355" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="358" polyA_stop="375"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E228886" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228886" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83220" e_stop="83574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAA</genome_strand>
        <mrna_strand>GGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTATAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E219956" ref_strand="+" ref_description="SGN-E219956 	[cLEL-24-M18]">
      <seq>tttttttagaagtgtttataactggctaccagcatgaaatattacttgagcttgataatatacagcaagatagttgtttcagtgcttgtccaaattgggtcacagaatgtttaaccttgtaacttacaacaaaatttagaccaagaaatgatacacacattctagaactctccatcattcaagttgggcataccagataccctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggatgctctcaaatactccaatgacctcaccagtctctggcttgctctgggtaacactcaaggtgatctttcctgttaaagatgccagtgttctttacgttctccttctgaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="-" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83884" stop="82922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83589" g_stop="83222" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="369" r_length="369" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="-" ref_id="SGN-E219956" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E219956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83589" e_stop="83222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCATTAGAAGTGTTTATAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATG-CAGTGTTCTTTACGTTCTCCTTCTGAAGCT</genome_strand>
        <mrna_strand>TTTTTTTAGAAGTGTTTATAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCCAGTGTTCTTTACGTTCTCCTTCTGAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E238629" ref_strand="-" ref_description="SGN-E238629 	[cLEL-9-A9]">
      <seq>gcttcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttataaacaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82923" stop="83877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83223" g_stop="83577" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="357" polyA_stop="372"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E238629" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238629" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83223" e_stop="83577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTT-AAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</genome_strand>
        <mrna_strand>GCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E292665" ref_strand="+" ref_description="SGN-E292665 	[cLET-11-G4]">
      <seq>tcagaaggagaacgtaaagaacactgcatctttaacaggaaagatcaccttgagtgttacccagagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82926" stop="83855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83226" g_stop="83544" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="319" r_length="319" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="329" polyA_stop="340"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E292665" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>319</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83226" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>TCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E220521" ref_strand="-" ref_description="SGN-E220521 	[cLEL-12-L11]">
      <seq>ccagagcaagccagagactggtgaggtcattggagtatttaagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccagttatccccaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82986" stop="83872"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83286" g_stop="83570" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="292" polyA_stop="310"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E220521" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>285</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E220521" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83286" e_stop="83570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTT</genome_strand>
        <mrna_strand>CCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTAAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E339947" ref_strand="+" ref_description="SGN-E339947 	[cTOF-3-H24]">
      <seq>gagcaagccagagactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="82989" stop="83838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83289" g_stop="83526" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83527" i_stop="83601" i_length="75">
            <donor d_prob="0.338" d_score="1.00"/>
            <acceptor a_prob="0.707" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83602" g_stop="83614" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="251" r_length="13" r_score="0.692"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E339947" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>251</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83289" e_stop="83526"/>
          <exon e_start="83602" e_stop="83614"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCTTGTATACACCCAGGATAAAGTAAAAA</genome_strand>
        <mrna_strand>GAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT...........................................................................GTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E218256" ref_strand="-" ref_description="SGN-E218256 	[cLEL-23-A7]">
      <seq>gactggtgaggtcattggagtatttgagagcatccagccatctgatactgatctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgaatcatttcttggtctaaattttgttgtaagttacaaggtttaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83001" stop="83855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83301" g_stop="83544" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="254" polyA_stop="271"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E218256" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>244</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218256" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83301" e_stop="83544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</genome_strand>
        <mrna_strand>GACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGAATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTTAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E232189" ref_strand="-" ref_description="SGN-E232189 	[cLEL-5-M23]">
      <seq>attggagtatttgaaagcatccagccatctgatactgttctgggggcaaaggttcccaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggtcaagccctgaagcaactatcttgctgtatattatcaagctcaagtaataattcatgctggtagccagttaaacgaaaaagaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83014" stop="104133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83314" g_stop="83570" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="257" r_length="257" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83571" i_stop="83809" i_length="239">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.938" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83810" g_stop="83836" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="283" r_length="26" r_score="0.519"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E232189" ref_strand="-">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>284</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232189" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="83314" e_stop="83570"/>
          <exon e_start="83810" e_stop="83836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCTTGTATACACCCAGGATAAAGTAAAAAGTACTGTCATCATAGAAAGGAGCAAATTCATGATAATCCATACCCCTTAGACTCCACAATCATCAAAATTAGTGAATATGTTCAGCAAAGGTAAGCTCAATCAAGTATTTTTATTAATAGATTTTACACCACGGAAAGGCTGGTCCTTACCAGTATATATCTACTAAGTAACAAACAACTGAGTGTTCATCATAGATCATGCAAGGGTAAAGCAGATGAAAT</genome_strand>
        <mrna_strand>ATTGGAGTATTTGAAAGCATCCAGCCATCTGATACTGTTCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGTCAAGCCCTGAAGCAACTATCTTGCTGTATATTATCAAGCTCAAGTAATAATTCATGCTGGTAGCCAGTT...............................................................................................................................................................................................................................................A-AACGAAAAAGAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E280617" ref_strand="+" ref_description="SGN-E280617 	[cLER-1-N5]">
      <seq>tgatactgatctgggggcaaaggttctcaaggatgtcaaaatccagggtatctggtatgcccaacttgaatgatggagagttctagaatgtgtgtatcatttcttggtctaaattttgttgtaagttacaaggttaaacattctgtgacccaatttggacaagcactgaaacaactatcttgctgtatattatcaagctcaagtaatatttcatgctggtagccaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="83043" stop="83867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83343" g_stop="83567" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="226" polyA_stop="244"/>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E280617" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>225</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83343" e_stop="83567"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCA</genome_strand>
        <mrna_strand>TGATACTGATCTGGGGGCAAAGGTTCTCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E480097" ref_strand="+" ref_description="SGN-E480097 	[cSTD-12-L9]">
      <seq>tgtattattttccccaaaattccttttcgcattcctatcactcggtttcaaaaaatgcacattattgaatgtatagcagaattctaacaaacagaagaaggtaaatcgctctgtggcttgctagtgatgaaatggataaacagcccggggctatggggaccaagtgccggtttagctttgcgattaggacaggcaactttctctgtcagttcgcttcttttcatgtgtttttggtgtttctttcttcagctacagctacgctcccttctgcttcttagtgacaaccatgggtttggtaacgccatggagcttgngattggcaatgattgatacattnttagtgttggctaaacgtccatctaatcagcggagagtattgtcagctgttgttttaggagattgggtcctttcggtactgtcactggccgtgtcgtgttcacagctagtgtggctgatttcctgattgcttctggtatgtatactgcagagatatatatgcctacgatatcaactctctgctgccatggctttcttgacttggatttttgtcatcgcgtctttgctcttcaatctttggcttcttcctaaccttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="88462" stop="91973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88760" g_stop="89036" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89037" i_stop="91264" i_length="2228">
            <donor d_prob="0.978" d_score="0.94"/>
            <acceptor a_prob="0.996" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91265" g_stop="91397" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="403" r_length="133" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91398" i_stop="91479" i_length="82">
            <donor d_prob="0.979" d_score="0.92"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91480" g_stop="91673" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="595" r_length="192" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E480097" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88760" e_stop="89036"/>
          <exon e_start="91265" e_stop="91397"/>
          <exon e_start="91480" e_stop="91673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTATTATTTTCCCCAAAATTCCTTTTCGCATTCCATTCACTCCGTTTCAAAACAAAAAAAAACTGCACATTATTGATTGAGTTGCAGAATTCTGACAAACACAACAAGGTAAATCGCTCTGTGGCGTGCTACTGATGAAATGGATAAACAGCCGGGGGCTATGGGGA-CGAGTGCTGGTTTAGCTTTGCGATTAGGACAGGCTATTTTCTCTGTCAGTTCACTTCTTTTCATGTG-TTTTGGTGTTTCTTTCTTAAGCTACAGCTACGCTCCCTTCTGGTACTTGAATTTTTTTATTTTTTTTTTAATTTCATCTCTTTTCACTATTCATCTCTTTTTTTCTTCTTCCTCGAGGTAATTTATTTCTGATTGTTGCTGTTTAAATCTTTGAATTTGGTGGGCTCTTGAAATTGGCATGTAAGTGAGATGAGTGGATTGAAAAGATTGAGCAGCCGATTGTAAGGAAACTAAACTTGAATTAGGCCTTAGCATGAGTACTTTTCATTTGTCTTAGCATCGGTGGATAGAGTTATCTGATATAAATTAGTTGAGGGCTAACCCGGAGTACCGGACACCATGATCATCAAATAAAGAAAAACCAAAATCTTTCCACTTTGAACTGTTAGGCACTTTTGAAATTACCACGTGATTGTCCAGTAGAGAGCTTTCATTGACCTTTTAAAGGTGTAAATAAAAAGAACTTCACAAGAGAGTTGTGAAGTTCATTTTCAGTATGGAGTCTGGAAGAAATGGTCAAATGCACATAAAGAAGCTTATATGTTGGATATATGCTTGGGTTATTTTATTGGAGTAGTTAATTGGTTGTTGCGGATTTGGATACATAATTGAGGTTAGATATGACCATTGTCAACAGGTCCTATTGCATGCTTTCTATACTTGAGAACTTGAAACAGATATCAGATTTTCTCTGTACTGTATCCAGAGTTTTGTCGTGAAAGCTGCCATTGGGAAGTGCTTAGTTGAGATTTATGCTGCCTGGAATCATCTATGCAGTTGTCATACCAATTGGAGTATTATACTGAAACGAGTTGTTAGTGGGATATATCTCACATTTGTAGTTATGTTTTTGTATAGCCTCAATTGGAGTATTATATATAATTTGAATTTGGCCTGCATAGGGCCCATTAAAGGAGGAAATGCTCTCTACCAGCAATTTCTCCATTTTCAGAGCTTGATCATGAAACCTCTAGTTAAGGGTTGAGGGAGAATCACCTGTTCCATCACATGTCTTGATAGTAATCTGTTCCACCACATCTCTTGATAGTATCTCATATACTTAATCTGTCTAACGGGGATTCTAAATTTATGAGCTGTATTTCCCATGGTTTAATGTTTCTATTGGTCATCGATGATTGAAATCATATTCTGCTTCTAAGGTGCTATTCCTGCATTTTCATTTTCTTATTTTGTTGCCTAAATAAAGCTCTCTAGCACACTCTTGCTTGGGTAGACCCTTCGGGGTGGCCCAGTGGTTTGAGCTTCGGACTTCCATGTTAGAGGTCTCAAGTTCGAAACCCCTTGCCAGCAAAAGCAAAGGGTTATCCTTCTGGATCGAGCTCGTCGCACCAGGCTTGCCTAGTGCGGTTACTTTTCCTATGTGGTTTGCGAGCAACCAACCCCTCGATTCTCGTGTGGCGACTATGTATGCCAACTCCAACTAGGAAACCACTACCGCTTAGGCCTAAACTCCTGAACCGGCAGGAAGAAGAAGCTCACCGATACTTTTTGTAAGTCCATGGTTTTAATATGACTTCTGGCTGAAGATTATTCCAATCGAAACCGCTGGCCAATTACTCTAGATTCGTACTGCATAGGGTCCTGTAATGTAGGAAGCGCTCCCCATCAGGAGTTTCTCCACTTCCAGGCTCGAACCTGAGACATGTGGTTAAGCGTGGAGGATCCCATCCATCCCACCACACCCCTTGATGTTATCTCATATGCATAGTCTGTTTAACAGATTCTAGATTTAGAAGTTATTATCCCATGGTTTAATGTTACTATTGGTCATTGTCAAACGAATCATATTCTGCTTCTAAGGTGCTGTTCTTGCATTTTCATTTTGTTATTCTTTCCAGAATACAGGCTTCTTAGCACTGATATTATTTGTATCCATGGTTAACTGTTACTATTGATTGATGATTATTCAATCAAACAACTCTTTTGCTTATAAGATGCTGTACATTGATGTATTTTTATTTTCCATATTTTAATTCTTGCAGAAGTAGGGGGTTTTAAAATCGAGATTTACTGGTTTGCCTGGGTCATAATTCCATCAACTTAGTAGCAGATGTCACCAAGTGTATTTATCGAGTAGTCATTCCTTAGTTTCACATTCTAAACTAATTCATGACTACATGTGCATAGTTTCAAGTAAGAATAGAACACAAGTAATCAGTTGCAGGAAAATCTTATTCTCTCTCTCGCTCTCAGTTGCATAGGTGCAATCTCTCTAATAAATTACCTATTTAACCTATTGTTGTTTGTAGCTTTTTGGTGACAACCATGGGTTTGGTAACACCATGGAGTTTGGGATTGGCAATGATTGATACATTTCTAGTCTTGGCTAAACGCCCATCTAATCAGCCCAGAGTATTGACAGCTGTTGTTTTAGGAGATTGGGTAAGTGCTTTGATAAATTTTGTGACAACTCAACTGTATAATCTTGTTCTGATCAAATAGCATATCATTGGGTTCAAAACAGGTCCTTTCGGTACTGTCACTGGCTGTGTCGTGTTCCACAGCTAGTGTGGCTGATTTCCTGATTGCTTCTGGTAATGTATACTGCAGAGATAACATATGCCTACGGTATCAACTCTCTGCTGCCATGGCTTTCTTGACTTGGA-TTTTGTCATCGGCGTCTTTGCTCTTGAATCTTTGGCTTCTTCCT-ACATTATA</genome_strand>
        <mrna_strand>TGTATTATTTTCCCCAAAATTCCTTTTCGCATTCCTATCACTCGGTTTC--------AAAAAA-TGCACATTATTGAATGTATAGCAGAATTCTAACAAACAGAAGAAGGTAAATCGCTCTGTGGCTTGCTAGTGATGAAATGGATAAACAGCCCGGGGCTATGGGGACCAAGTGCCGGTTTAGCTTTGCGATTAGGACAGGCAACTTTCTCTGTCAGTTCGCTTCTTTTCATGTGTTTTTGGTGTTTCTTTCTTCAGCTACAGCTACGCTCCCTTCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTAGTGACAACCATGGGTTTGGTAACGCCATGGAGCTTGNGATTGGCAATGATTGATACATTNTTAGTGTTGGCTAAACGTCCATCTAATCAGCGGAGAGTATTGTCAGCTGTTGTTTTAGGAGATTGG..................................................................................GTCCTTTCGGTACTGTCACTGGCCGTGTCGTGTT-CACAGCTAGTGTGGCTGATTTCCTGATTGCTTCTGGT-ATGTATACTGCAGAGAT-ATATATGCCTACGATATCAACTCTCTGCTGCCATGGCTTTCTTGACTTGGATTTTTGTCATC-GCGTCTTTGCTCTTCAATCTTTGGCTTCTTCCTAACCTTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E428488" ref_strand="+" ref_description="SGN-E428488 	[STM-50-M12]">
      <seq>tattattttccccaaaattccttttcgcattcctatcactcggtttcaaaaaactgcacattattgaatgtatagcagaattctaacaaacagaagaaggtaaatcgctctgtggcttgctagtgatgaaatggataaacagccgggggctatggggacgagtgccggtttagctttgcgattaggacaggcaactttctctgtcagttcgcttcttttcatgtgttttggtgtttctttcttcagctacagctacgctcccttctgcttcttagtgacaaccatgggtttggtaacgccatggagcttgggattggcaatgattgatacatttttagtgttggctaaacgtccatctaatcagcggagagtattgtcagctgttgttttaggagattgggtcctttcggtactgtcactggccgtgtcgtgttccacagctagtgtggctgatttcctgattgcttctggtaatgtatactgcagagataatatatgcctacgatatcaactctctgctgccatggctttnctgacttggattttgtcatcggcgtctttgctcttcaatctttggcttcttcctaccntatattagttggatgtatctctggtcctggacccctcctggntgtctcttggattaacgaatagggagtaaagatgtcactaatatggtctgctaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="88462" stop="91987"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88762" g_stop="89036" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89037" i_stop="91264" i_length="2228">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91265" g_stop="91397" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="400" r_length="133" r_score="0.925"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91398" i_stop="91479" i_length="82">
            <donor d_prob="0.979" d_score="0.92"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91480" g_stop="91732" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="657" r_length="257" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E428488" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88762" e_stop="89036"/>
          <exon e_start="91265" e_stop="91397"/>
          <exon e_start="91480" e_stop="91732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTATTTTCCCCAAAATTCCTTTTCGCATTCCATTCACTCCGTTTCAAAACAAAAAAAAACTGCACATTATTGATTGAGTTGCAGAATTCTGACAAACACAACAAGGTAAATCGCTCTGTGGCGTGCTACTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCTGGTTTAGCTTTGCGATTAGGACAGGCTATTTTCTCTGTCAGTTCACTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTAAGCTACAGCTACGCTCCCTTCTGGTACTTGAATTTTTTTATTTTTTTTTTAATTTCATCTCTTTTCACTATTCATCTCTTTTTTTCTTCTTCCTCGAGGTAATTTATTTCTGATTGTTGCTGTTTAAATCTTTGAATTTGGTGGGCTCTTGAAATTGGCATGTAAGTGAGATGAGTGGATTGAAAAGATTGAGCAGCCGATTGTAAGGAAACTAAACTTGAATTAGGCCTTAGCATGAGTACTTTTCATTTGTCTTAGCATCGGTGGATAGAGTTATCTGATATAAATTAGTTGAGGGCTAACCCGGAGTACCGGACACCATGATCATCAAATAAAGAAAAACCAAAATCTTTCCACTTTGAACTGTTAGGCACTTTTGAAATTACCACGTGATTGTCCAGTAGAGAGCTTTCATTGACCTTTTAAAGGTGTAAATAAAAAGAACTTCACAAGAGAGTTGTGAAGTTCATTTTCAGTATGGAGTCTGGAAGAAATGGTCAAATGCACATAAAGAAGCTTATATGTTGGATATATGCTTGGGTTATTTTATTGGAGTAGTTAATTGGTTGTTGCGGATTTGGATACATAATTGAGGTTAGATATGACCATTGTCAACAGGTCCTATTGCATGCTTTCTATACTTGAGAACTTGAAACAGATATCAGATTTTCTCTGTACTGTATCCAGAGTTTTGTCGTGAAAGCTGCCATTGGGAAGTGCTTAGTTGAGATTTATGCTGCCTGGAATCATCTATGCAGTTGTCATACCAATTGGAGTATTATACTGAAACGAGTTGTTAGTGGGATATATCTCACATTTGTAGTTATGTTTTTGTATAGCCTCAATTGGAGTATTATATATAATTTGAATTTGGCCTGCATAGGGCCCATTAAAGGAGGAAATGCTCTCTACCAGCAATTTCTCCATTTTCAGAGCTTGATCATGAAACCTCTAGTTAAGGGTTGAGGGAGAATCACCTGTTCCATCACATGTCTTGATAGTAATCTGTTCCACCACATCTCTTGATAGTATCTCATATACTTAATCTGTCTAACGGGGATTCTAAATTTATGAGCTGTATTTCCCATGGTTTAATGTTTCTATTGGTCATCGATGATTGAAATCATATTCTGCTTCTAAGGTGCTATTCCTGCATTTTCATTTTCTTATTTTGTTGCCTAAATAAAGCTCTCTAGCACACTCTTGCTTGGGTAGACCCTTCGGGGTGGCCCAGTGGTTTGAGCTTCGGACTTCCATGTTAGAGGTCTCAAGTTCGAAACCCCTTGCCAGCAAAAGCAAAGGGTTATCCTTCTGGATCGAGCTCGTCGCACCAGGCTTGCCTAGTGCGGTTACTTTTCCTATGTGGTTTGCGAGCAACCAACCCCTCGATTCTCGTGTGGCGACTATGTATGCCAACTCCAACTAGGAAACCACTACCGCTTAGGCCTAAACTCCTGAACCGGCAGGAAGAAGAAGCTCACCGATACTTTTTGTAAGTCCATGGTTTTAATATGACTTCTGGCTGAAGATTATTCCAATCGAAACCGCTGGCCAATTACTCTAGATTCGTACTGCATAGGGTCCTGTAATGTAGGAAGCGCTCCCCATCAGGAGTTTCTCCACTTCCAGGCTCGAACCTGAGACATGTGGTTAAGCGTGGAGGATCCCATCCATCCCACCACACCCCTTGATGTTATCTCATATGCATAGTCTGTTTAACAGATTCTAGATTTAGAAGTTATTATCCCATGGTTTAATGTTACTATTGGTCATTGTCAAACGAATCATATTCTGCTTCTAAGGTGCTGTTCTTGCATTTTCATTTTGTTATTCTTTCCAGAATACAGGCTTCTTAGCACTGATATTATTTGTATCCATGGTTAACTGTTACTATTGATTGATGATTATTCAATCAAACAACTCTTTTGCTTATAAGATGCTGTACATTGATGTATTTTTATTTTCCATATTTTAATTCTTGCAGAAGTAGGGGGTTTTAAAATCGAGATTTACTGGTTTGCCTGGGTCATAATTCCATCAACTTAGTAGCAGATGTCACCAAGTGTATTTATCGAGTAGTCATTCCTTAGTTTCACATTCTAAACTAATTCATGACTACATGTGCATAGTTTCAAGTAAGAATAGAACACAAGTAATCAGTTGCAGGAAAATCTTATTCTCTCTCTCGCTCTCAGTTGCATAGGTGCAATCTCTCTAATAAATTACCTATTTAACCTATTGTTGTTTGTAGCTTTTTGGTGACAACCATGGGTTTGGTAACACCATGGAGTTTGGGATTGGCAATGATTGATACATTTCTAGTCTTGGCTAAACGCCCATCTAATCAGCCCAGAGTATTGACAGCTGTTGTTTTAGGAGATTGGGTAAGTGCTTTGATAAATTTTGTGACAACTCAACTGTATAATCTTGTTCTGATCAAATAGCATATCATTGGGTTCAAAACAGGTCCTTTCGGTACTGTCACTGGCTGTGTCGTGTTCCACAGCTAGTGTGGCTGATTTCCTGATTGCTTCTGGTAATGTATACTGCAGAGATAACATATGCCTACGGTATCAACTCTCTGCTGCCATGGCTTTCTTGACTTGGATTTTGTCATCGGCGTCTTTGCTCTTGAATCTTTGGCTTCTTCCTACATTATATTAG-T---TGCATCTCTGGTCCTTGTCCCCTCCTGGTTGTCTCTTGATTTAACGAATAGGAA</genome_strand>
        <mrna_strand>TATTATTTTCCCCAAAATTCCTTTTCGCATTCCTATCACTCGGTTT-----C---AAAAAACTGCACATTATTGAATGTATAGCAGAATTCTAACAAACAGAAGAAGGTAAATCGCTCTGTGGCTTGCTAGTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCCGGTTTAGCTTTGCGATTAGGACAGGCAACTTTCTCTGTCAGTTCGCTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTCAGCTACAGCTACGCTCCCTTCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTAGTGACAACCATGGGTTTGGTAACGCCATGGAGCTTGGGATTGGCAATGATTGATACATTTTTAGTGTTGGCTAAACGTCCATCTAATCAGCGGAGAGTATTGTCAGCTGTTGTTTTAGGAGATTGG..................................................................................GTCCTTTCGGTACTGTCACTGGCCGTGTCGTGTTCCACAGCTAGTGTGGCTGATTTCCTGATTGCTTCTGGTAATGTATACTGCAGAGATAATATATGCCTACGATATCAACTCTCTGCTGCCATGGCTTTNCTGACTTGGATTTTGTCATCGGCGTCTTTGCTCTTCAATCTTTGGCTTCTTCCTACCNTATATTAGTTGGATGTATCTCTGGTCCTGGACCCCTCCTGGNTGTCTCTTGGATTAACGAATAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E553565" ref_strand="+" ref_description="SGN-E553565 	[cTSC-1-I15]">
      <seq>tccattcactccgtttcaaacaaaaaaaaactgcacattattgattgagttgcagaattctgacaaacacaacaaggtaaatcgctctgtggcgtgctactgatgaaatggataaacagccgggggctatggggacgagtgctggtttagctttgcgattaggacaggctattttctctgtcagttcacttcttttcatgtgttttggtgtttctttcttaagctacagctacgctcccttctggtacttgaatttttttttttttttttaatttcatctcttttcactattcatctctttttttcttcttcctcgaggtaatttatttctgattgttgctgtttaaatctttgaatttggtgggctcttgaaattggcatgtaagtgagatgagtggattgaaaagattgagcagccgattgtaaggaaactaaacttgaattaggccttagcatgagtacttttcatttgtcttagcatcggtggatagagttatctgatataaattagttgagggctaacccggagtaccggacaccatgatcatcaaataaagaaaaaccaaaatctttccactttgaactgttaggcacttttgaaattaccacgtgattgtccagtagagagctttcattgaccttttaaaggtgtaaataaaaagaacttcacaagagagttgtgaagttcattttcagtatggagtctggaagaaatggtcaaatgcacataaaagaagcttatatgttggatattatgccttgggttattttattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="88492" stop="89866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88792" g_stop="89566" g_length="775"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="776" r_length="776" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E553565" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88792" e_stop="89566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTCACTCCGTTTCAAAACAAAAAAAAACTGCACATTATTGATTGAGTTGCAGAATTCTGACAAACACAACAAGGTAAATCGCTCTGTGGCGTGCTACTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCTGGTTTAGCTTTGCGATTAGGACAGGCTATTTTCTCTGTCAGTTCACTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTAAGCTACAGCTACGCTCCCTTCTGGTACTTGAATTTTTTTATTTTTTTTTTAATTTCATCTCTTTTCACTATTCATCTCTTTTTTTCTTCTTCCTCGAGGTAATTTATTTCTGATTGTTGCTGTTTAAATCTTTGAATTTGGTGGGCTCTTGAAATTGGCATGTAAGTGAGATGAGTGGATTGAAAAGATTGAGCAGCCGATTGTAAGGAAACTAAACTTGAATTAGGCCTTAGCATGAGTACTTTTCATTTGTCTTAGCATCGGTGGATAGAGTTATCTGATATAAATTAGTTGAGGGCTAACCCGGAGTACCGGACACCATGATCATCAAATAAAGAAAAACCAAAATCTTTCCACTTTGAACTGTTAGGCACTTTTGAAATTACCACGTGATTGTCCAGTAGAGAGCTTTCATTGACCTTTTAAAGGTGTAAATAAAAAGAACTTCACAAGAGAGTTGTGAAGTTCATTTTCAGTATGGAGTCTGGAAGAAATGGTCAAATGCACAT-AAAGAAGCTTATATGTTGGATA-TATG-CTTGGGTTATTTTATTGG</genome_strand>
        <mrna_strand>TCCATTCACTCCGTTTC-AAACAAAAAAAAACTGCACATTATTGATTGAGTTGCAGAATTCTGACAAACACAACAAGGTAAATCGCTCTGTGGCGTGCTACTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCTGGTTTAGCTTTGCGATTAGGACAGGCTATTTTCTCTGTCAGTTCACTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTAAGCTACAGCTACGCTCCCTTCTGGTACTTGAATTTTTTT-TTTTTTTTTTAATTTCATCTCTTTTCACTATTCATCTCTTTTTTTCTTCTTCCTCGAGGTAATTTATTTCTGATTGTTGCTGTTTAAATCTTTGAATTTGGTGGGCTCTTGAAATTGGCATGTAAGTGAGATGAGTGGATTGAAAAGATTGAGCAGCCGATTGTAAGGAAACTAAACTTGAATTAGGCCTTAGCATGAGTACTTTTCATTTGTCTTAGCATCGGTGGATAGAGTTATCTGATATAAATTAGTTGAGGGCTAACCCGGAGTACCGGACACCATGATCATCAAATAAAGAAAAACCAAAATCTTTCCACTTTGAACTGTTAGGCACTTTTGAAATTACCACGTGATTGTCCAGTAGAGAGCTTTCATTGACCTTTTAAAGGTGTAAATAAAAAGAACTTCACAAGAGAGTTGTGAAGTTCATTTTCAGTATGGAGTCTGGAAGAAATGGTCAAATGCACATAAAAGAAGCTTATATGTTGGATATTATGCCTTGGGTTATTTTATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-ScW8FO/sgn_ests_tomato_potato" ref_id="SGN-E428489" ref_strand="-" ref_description="SGN-E428489 	[STM-50-M12]">
      <seq>gttcaaaaaaactgcacattattgaatgtatagcagaattctaacaaacagaagaaggtaaatcgctctgtggcttgctagtgatgaaatggataaacagccgggggctatggggacgagtgccggtttagctttgcgattaggacaggcaactttctctgtcagttcgcttcttttcatgtgttttggtgtttctttcttcagctacagctacgctcccttctgcttcttagtgacaaccatgggtttggtaacgccatggagcttgggattggcaatgattgatacatttttagtgttggctaaacgtccatctaatcagcggagagtattgtcagctgttgttttaggagattgggtcctttcggtactgtcactggccgtgtcgtgttccacagctagtgtggctgatttcctgattgcttctggtaatgtatactgcagagataatatatgcctacgatatcaactctctgctgccatggctttcttgacttggattttgtcatcggcgtctttgctcttcaatctttggcttcttcctaccttatattagttgtatgtatatatggtcctggacccctcctggttgtctcttgatttaacgaatagggagtaaggaatgtcactaatagttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-ISFsH/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0163K16.1" temp_strand="+" temp_description="C02HBa0163K16.1  submitted_to_sgn_as:C02HBa0163K16 len=126229 date=060215">
        <position start="88516" stop="92050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88812" g_stop="89036" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89037" i_stop="91264" i_length="2228">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91265" g_stop="91397" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="358" r_length="133" r_score="0.925"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91398" i_stop="91479" i_length="82">
            <donor d_prob="0.979" d_score="0.92"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91480" g_stop="91756" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="639" r_length="281" r_score="0.895"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0163K16.1" gen_strand="+" ref_id="SGN-E428489" ref_strand="-">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0163K16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428489" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="88812" e_stop="89036"/>
          <exon e_start="91265" e_stop="91397"/>
          <exon e_start="91480" e_stop="91756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAAAAAAACTGCACATTATTGATTGAGTTGCAGAATTCTGACAAACACAACAAGGTAAATCGCTCTGTGGCGTGCTACTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCTGGTTTAGCTTTGCGATTAGGACAGGCTATTTTCTCTGTCAGTTCACTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTAAGCTACAGCTACGCTCCCTTCTGGTACTTGAATTTTTTTATTTTTTTTTTAATTTCATCTCTTTTCACTATTCATCTCTTTTTTTCTTCTTCCTCGAGGTAATTTATTTCTGATTGTTGCTGTTTAAATCTTTGAATTTGGTGGGCTCTTGAAATTGGCATGTAAGTGAGATGAGTGGATTGAAAAGATTGAGCAGCCGATTGTAAGGAAACTAAACTTGAATTAGGCCTTAGCATGAGTACTTTTCATTTGTCTTAGCATCGGTGGATAGAGTTATCTGATATAAATTAGTTGAGGGCTAACCCGGAGTACCGGACACCATGATCATCAAATAAAGAAAAACCAAAATCTTTCCACTTTGAACTGTTAGGCACTTTTGAAATTACCACGTGATTGTCCAGTAGAGAGCTTTCATTGACCTTTTAAAGGTGTAAATAAAAAGAACTTCACAAGAGAGTTGTGAAGTTCATTTTCAGTATGGAGTCTGGAAGAAATGGTCAAATGCACATAAAGAAGCTTATATGTTGGATATATGCTTGGGTTATTTTATTGGAGTAGTTAATTGGTTGTTGCGGATTTGGATACATAATTGAGGTTAGATATGACCATTGTCAACAGGTCCTATTGCATGCTTTCTATACTTGAGAACTTGAAACAGATATCAGATTTTCTCTGTACTGTATCCAGAGTTTTGTCGTGAAAGCTGCCATTGGGAAGTGCTTAGTTGAGATTTATGCTGCCTGGAATCATCTATGCAGTTGTCATACCAATTGGAGTATTATACTGAAACGAGTTGTTAGTGGGATATATCTCACATTTGTAGTTATGTTTTTGTATAGCCTCAATTGGAGTATTATATATAATTTGAATTTGGCCTGCATAGGGCCCATTAAAGGAGGAAATGCTCTCTACCAGCAATTTCTCCATTTTCAGAGCTTGATCATGAAACCTCTAGTTAAGGGTTGAGGGAGAATCACCTGTTCCATCACATGTCTTGATAGTAATCTGTTCCACCACATCTCTTGATAGTATCTCATATACTTAATCTGTCTAACGGGGATTCTAAATTTATGAGCTGTATTTCCCATGGTTTAATGTTTCTATTGGTCATCGATGATTGAAATCATATTCTGCTTCTAAGGTGCTATTCCTGCATTTTCATTTTCTTATTTTGTTGCCTAAATAAAGCTCTCTAGCACACTCTTGCTTGGGTAGACCCTTCGGGGTGGCCCAGTGGTTTGAGCTTCGGACTTCCATGTTAGAGGTCTCAAGTTCGAAACCCCTTGCCAGCAAAAGCAAAGGGTTATCCTTCTGGATCGAGCTCGTCGCACCAGGCTTGCCTAGTGCGGTTACTTTTCCTATGTGGTTTGCGAGCAACCAACCCCTCGATTCTCGTGTGGCGACTATGTATGCCAACTCCAACTAGGAAACCACTACCGCTTAGGCCTAAACTCCTGAACCGGCAGGAAGAAGAAGCTCACCGATACTTTTTGTAAGTCCATGGTTTTAATATGACTTCTGGCTGAAGATTATTCCAATCGAAACCGCTGGCCAATTACTCTAGATTCGTACTGCATAGGGTCCTGTAATGTAGGAAGCGCTCCCCATCAGGAGTTTCTCCACTTCCAGGCTCGAACCTGAGACATGTGGTTAAGCGTGGAGGATCCCATCCATCCCACCACACCCCTTGATGTTATCTCATATGCATAGTCTGTTTAACAGATTCTAGATTTAGAAGTTATTATCCCATGGTTTAATGTTACTATTGGTCATTGTCAAACGAATCATATTCTGCTTCTAAGGTGCTGTTCTTGCATTTTCATTTTGTTATTCTTTCCAGAATACAGGCTTCTTAGCACTGATATTATTTGTATCCATGGTTAACTGTTACTATTGATTGATGATTATTCAATCAAACAACTCTTTTGCTTATAAGATGCTGTACATTGATGTATTTTTATTTTCCATATTTTAATTCTTGCAGAAGTAGGGGGTTTTAAAATCGAGATTTACTGGTTTGCCTGGGTCATAATTCCATCAACTTAGTAGCAGATGTCACCAAGTGTATTTATCGAGTAGTCATTCCTTAGTTTCACATTCTAAACTAATTCATGACTACATGTGCATAGTTTCAAGTAAGAATAGAACACAAGTAATCAGTTGCAGGAAAATCTTATTCTCTCTCTCGCTCTCAGTTGCATAGGTGCAATCTCTCTAATAAATTACCTATTTAACCTATTGTTGTTTGTAGCTTTTTGGTGACAACCATGGGTTTGGTAACACCATGGAGTTTGGGATTGGCAATGATTGATACATTTCTAGTCTTGGCTAAACGCCCATCTAATCAGCCCAGAGTATTGACAGCTGTTGTTTTAGGAGATTGGGTAAGTGCTTTGATAAATTTTGTGACAACTCAACTGTATAATCTTGTTCTGATCAAATAGCATATCATTGGGTTCAAAACAGGTCCTTTCGGTACTGTCACTGGCTGTGTCGTGTTCCACAGCTAGTGTGGCTGATTTCCTGATTGCTTCTGGTAATGTATACTGCAGAGATAACATATGCCTACGGTATCAACTCTCTGCTGCCATGGCTTTCTTGACTTGGATTTTGTCATCGGCGTCTTTGCTCTTGAATCTTTGGCTTCTTCCTACATTATATTAGTTG----CATCTCTGGTCCTTGTCCCCTCCTGGTTGTCTCTTGATTTAACGAATAGGAAGTAACAATTGTGACCGATCTATTC</genome_strand>
        <mrna_strand>GTTCAAAAAAACTGCACATTATTGAATGTATAGCAGAATTCTAACAAACAGAAGAAGGTAAATCGCTCTGTGGCTTGCTAGTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCCGGTTTAGCTTTGCGATTAGGACAGGCAACTTTCTCTGTCAGTTCGCTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTCAGCTACAGCTACGCTCCCTTCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCTTAGTGACAACCATGGGTTTGGTAACGCCATGGAGCTTGGGATTGGCAATGATTGATACATTTTTAGTGTTGGCTAAACGTCCATCTAATCAGCGGAGAGTATTGTCAGCTGTTGTTTTAGGAGATTGG..................................................................................GTCCTTTCGGTACTGTCACTGGCCGTGTCGTGTTCCACAGCTAGTGTGGCTGATTTCCTGATTGCTTCTGGTAATGTATACTGCAGAGATAATATATGCCTACGATATCAACTCTCTGCTGCCATGGCTTTCTTGACTTGGATTTTGTCATCGGCGTCTTTGCTCTTCAATCTTTGGCTTCTTCCTACCTTATATTAGTTGTATGTATATATGGTCCTGGACCCCTCCTGGTTGTCTCTTGATTTAACGAATAGGGAGTAAGGAATGTCACTAATAGTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>265</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="84" PGL_stop="2233"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84" e_stop="2233"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="84" e_stop="2233" e_length="2150"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84" stop="674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="339" stop="746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="557" stop="777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="602" stop="953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="690" stop="1275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="772" stop="1340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264929" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="801" stop="1463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448419" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1077" stop="1628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1237" stop="1974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1263" stop="1774"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1450" stop="2107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1802" stop="2233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1824" stop="2223"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267402" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1903" stop="2107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597213" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTCCAAGAAGCAAAAGGTCTGATCAGGAGCAACCTTTTGGAGTCAAATCAAGCTGTAGTATATAGTGAACCTGAGAAAAAAGTCATGTCGCGATCCGGGGATGAGTGTGTTGTGGCTTTGACTGATCAATGGTATATCACTTATGGAGAATCAGAATGGAGGAAGGCTGCAGAGGAGTGTCTGGCCAATATGAATCTCTACTCTGATGAGACACGACATGGCTTTGAGCACACTCTCAGCTGGCTTAATCAGTGGGCTTGTTCTCGCAGTTTTGGGCTTGGAACTCGTATTCCTTGGGATGAGGAATTCTTAGTTGAGTCCTTGTCCGATTCCACTATTTATATGGCATATTACACAGTGGCACACTTCTTGCAGAAAGGGGACATGTATGGTAATGATCGTTCTTCAGTGAAACCAGAGCACTTGACAGATGAGGTCTGGGAATTCTTGTTCTGTGATGGGCCTTTTCCTGAAAATTCTTATATATCTTCTTCTCTTCTAAAGGAGATGAAGCAGGAATTTCTCTACTGGTATCCATTCGATCTTAGAGTTTCTGGCAAGGATCTTATTCAGAATCATCTTACCTTTTGCATCTATAACCACACTGCCCTCTTCCCTAAGCACCACTGGCCACGTGGTTTCAGATGCAATGGGCATATAATGCTTAACTCTGAGAAGATGTCTAAGTCCACTGGGAATTTCCGAACACTCCGGCAGGCAATTGAAGAGTTTTCAGCTGATGCCACACGCTTTTCTCTTGCTGATGCGGGTGATGGGATGGACGATGCTAATTTTGTCTTTGAAACAGCTAATGCTGCTATCTTACGTCTTACAAAAGAAATAGCATGGATGCAGGAAGTCCTTGATGCAGAGACATCTTTAAGAACTGGGCCTCCATCCACATATGCTGACCGCGTATTTGCTAATGAAATAAATATTGCAGTAAGGACTACAGAGAAGAACTATAGTGAGTACATGTTCCGGGATGCTCTGAAAACTGGTTTTTATGATCTTCAGGCTGCCAGAGATGAGTATAGGCTCTCCTGTGGTTCAGGAGGCATGAACCGGGATTTGCTATGGCGATTTATGGATGTTCAAACACGACTTATTGCTCCTATCTGTCCACACTATGCTGAGTATGCCTGGAGAAAGCTTTTGAAGAAGGATGGTTATGGCATCAAAGCTGGCTGGCCAGAGGCTGATTTGCCAGATCTTAGCCTTAAGAAGGCCAACAAATATTTGCAAGACACGATTGTCTCGATGAGGAAGCTGCTTCAGAAGCAAGTTTCTGGTTCAAAGAAAGGAAATGCCAATTTGACTAGCCAAAACAAACCTTCTGTGGGCCTGGTATATGTGGATGAGCAGTATAGTGGATGGAAAAAGGAATGTTTGGGAATCCTGCAGAGGAAATTCGACACTTCAACTGGCTCCTTTGCACCTGACAAAGAAATCCTCTCCGAATTGCAGAAGAGTGAGATCGGGCAACAAGGCAACTTCAAACAAATACAAAAGCTGTGTATGCCATTCTTGAGGTTCAAGAAAGACGAAGTAGTGGCTGTTGGGGTTCAAGCATTGGACTTGAAGCTTCCGTTTGGTGAGATTGAAGTCCTTGAGAAGAACTCGGAGTTGATCAAGAGACAGCTTGGTCTTGAGACATTGGAGATCTTATCTATGACAGATGATGCTCTAGAGAGAGCAGGGCCTCATGCTGCAGTTGTGAAGCAGAATCCTCCCTCACCAGGAAATCCAACTGCTATCTTTCTCTGAGTAAATCATTTTTGCTGCATAAGTTTTGTGATGAACAAGTCTTGTTTGAGACCTACATGATGTGATACTCTCTTTCTAGATCTTTTTTGTCCGTGCATTCTGCCTACATTCTATTACTTGCTGACATTCTAGGTCCAAATTAATGGTTTATTTGCTTCAATCTTGATATGGAGCAGCTGCAATCATATCTCCACAGTAGTACTCGTTGAGTAGGAATTTGACAATTTGAGCATCTTTGAGTTTACCATTCTACAAGGTTTTCCTAGTTGTATCATCTTTTGATCATTTCTGCTTATAGCTTGATTGTCTTTTGATGCTGTATAAGCTGTTCAAGTATGACTGTTTTTTGTTGAGTAATTTACGTAATTTCATATTCTGAGGC</gDNA_template>
            <first_frame> S  P  R  S  K  R  S  D  Q  E  Q  P  F  G  V  K  S  S  C  S  I  *  *  T  *  E  K  S  H  V  A  I  R  G  *  V  C  C  G  F  D  *  S  M  V  Y  H  L  W  R  I  R  M  E  E  G  C  R  G  V  S  G  Q  Y  E  S  L  L  *  *  D  T  T  W  L  *  A  H  S  Q  L  A  *  S  V  G  L  F  S  Q  F  W  A  W  N  S  Y  S  L  G  *  G  I  L  S  *  V  L  V  R  F  H  Y  L  Y  G  I  L  H  S  G  T  L  L  A  E  R  G  H  V  W  *  *  S  F  F  S  E  T  R  A  L  D  R  *  G  L  G  I  L  V  L  *  W  A  F  S  *  K  F  L  Y  I  F  F  S  S  K  G  D  E  A  G  I  S  L  L  V  S  I  R  S  *  S  F  W  Q  G  S  Y  S  E  S  S  Y  L  L  H  L  *  P  H  C  P  L  P  *  A  P  L  A  T  W  F  Q  M  Q  W  A  Y  N  A  *  L  *  E  D  V  *  V  H  W  E  F  P  N  T  P  A  G  N  *  R  V  F  S  *  C  H  T  L  F  S  C  *  C  G  *  W  D  G  R  C  *  F  C  L  *  N  S  *  C  C  Y  L  T  S  Y  K  R  N  S  M  D  A  G  S  P  *  C  R  D  I  F  K  N  W  A  S  I  H  I  C  *  P  R  I  C  *  *  N  K  Y  C  S  K  D  Y  R  E  E  L  *  *  V  H  V  P  G  C  S  E  N  W  F  L  *  S  S  G  C  Q  R  *  V  *  A  L  L  W  F  R  R  H  E  P  G  F  A  M  A  I  Y  G  C  S  N  T  T  Y  C  S  Y  L  S  T  L  C  *  V  C  L  E  K  A  F  E  E  G  W  L  W  H  Q  S  W  L  A  R  G  *  F  A  R  S  *  P  *  E  G  Q  Q  I  F  A  R  H  D  C  L  D  E  E  A  A  S  E  A  S  F  W  F  K  E  R  K  C  Q  F  D  *  P  K  Q  T  F  C  G  P  G  I  C  G  *  A  V  *  W  M  E  K  G  M  F  G  N  P  A  E  E  I  R  H  F  N  W  L  L  C  T  *  Q  R  N  P  L  R  I  A  E  E  *  D  R  A  T  R  Q  L  Q  T  N  T  K  A  V  Y  A  I  L  E  V  Q  E  R  R  S  S  G  C  W  G  S  S  I  G  L  E  A  S  V  W  *  D  *  S  P  *  E  E  L  G  V  D  Q  E  T  A  W  S  *  D  I  G  D  L  I  Y  D  R  *  C  S  R  E  S  R  A  S  C  C  S  C  E  A  E  S  S  L  T  R  K  S  N  C  Y  L  S  L  S  K  S  F  L  L  H  K  F  C  D  E  Q  V  L  F  E  T  Y  M  M  *  Y  S  L  S  R  S  F  L  S  V  H  S  A  Y  I  L  L  L  A  D  I  L  G  P  N  *  W  F  I  C  F  N  L  D  M  E  Q  L  Q  S  Y  L  H  S  S  T  R  *  V  G  I  *  Q  F  E  H  L  *  V  Y  H  S  T  R  F  S  *  L  Y  H  L  L  I  I  S  A  Y  S  L  I  V  F  *  C  C  I  S  C  S  S  M  T  V  F  C  *  V  I  Y  V  I  S  Y  S  E   </first_frame>
            <second_frame>  V  Q  E  A  K  G  L  I  R  S  N  L  L  E  S  N  Q  A  V  V  Y  S  E  P  E  K  K  V  M  S  R  S  G  D  E  C  V  V  A  L  T  D  Q  W  Y  I  T  Y  G  E  S  E  W  R  K  A  A  E  E  C  L  A  N  M  N  L  Y  S  D  E  T  R  H  G  F  E  H  T  L  S  W  L  N  Q  W  A  C  S  R  S  F  G  L  G  T  R  I  P  W  D  E  E  F  L  V  E  S  L  S  D  S  T  I  Y  M  A  Y  Y  T  V  A  H  F  L  Q  K  G  D  M  Y  G  N  D  R  S  S  V  K  P  E  H  L  T  D  E  V  W  E  F  L  F  C  D  G  P  F  P  E  N  S  Y  I  S  S  S  L  L  K  E  M  K  Q  E  F  L  Y  W  Y  P  F  D  L  R  V  S  G  K  D  L  I  Q  N  H  L  T  F  C  I  Y  N  H  T  A  L  F  P  K  H  H  W  P  R  G  F  R  C  N  G  H  I  M  L  N  S  E  K  M  S  K  S  T  G  N  F  R  T  L  R  Q  A  I  E  E  F  S  A  D  A  T  R  F  S  L  A  D  A  G  D  G  M  D  D  A  N  F  V  F  E  T  A  N  A  A  I  L  R  L  T  K  E  I  A  W  M  Q  E  V  L  D  A  E  T  S  L  R  T  G  P  P  S  T  Y  A  D  R  V  F  A  N  E  I  N  I  A  V  R  T  T  E  K  N  Y  S  E  Y  M  F  R  D  A  L  K  T  G  F  Y  D  L  Q  A  A  R  D  E  Y  R  L  S  C  G  S  G  G  M  N  R  D  L  L  W  R  F  M  D  V  Q  T  R  L  I  A  P  I  C  P  H  Y  A  E  Y  A  W  R  K  L  L  K  K  D  G  Y  G  I  K  A  G  W  P  E  A  D  L  P  D  L  S  L  K  K  A  N  K  Y  L  Q  D  T  I  V  S  M  R  K  L  L  Q  K  Q  V  S  G  S  K  K  G  N  A  N  L  T  S  Q  N  K  P  S  V  G  L  V  Y  V  D  E  Q  Y  S  G  W  K  K  E  C  L  G  I  L  Q  R  K  F  D  T  S  T  G  S  F  A  P  D  K  E  I  L  S  E  L  Q  K  S  E  I  G  Q  Q  G  N  F  K  Q  I  Q  K  L  C  M  P  F  L  R  F  K  K  D  E  V  V  A  V  G  V  Q  A  L  D  L  K  L  P  F  G  E  I  E  V  L  E  K  N  S  E  L  I  K  R  Q  L  G  L  E  T  L  E  I  L  S  M  T  D  D  A  L  E  R  A  G  P  H  A  A  V  V  K  Q  N  P  P  S  P  G  N  P  T  A  I  F  L  *  V  N  H  F  C  C  I  S  F  V  M  N  K  S  C  L  R  P  T  *  C  D  T  L  F  L  D  L  F  C  P  C  I  L  P  T  F  Y  Y  L  L  T  F  *  V  Q  I  N  G  L  F  A  S  I  L  I  W  S  S  C  N  H  I  S  T  V  V  L  V  E  *  E  F  D  N  L  S  I  F  E  F  T  I  L  Q  G  F  P  S  C  I  I  F  *  S  F  L  L  I  A  *  L  S  F  D  A  V  *  A  V  Q  V  *  L  F  F  V  E  *  F  T  *  F  H  I  L  R  </second_frame>
            <third_frame>   S  K  K  Q  K  V  *  S  G  A  T  F  W  S  Q  I  K  L  *  Y  I  V  N  L  R  K  K  S  C  R  D  P  G  M  S  V  L  W  L  *  L  I  N  G  I  S  L  M  E  N  Q  N  G  G  R  L  Q  R  S  V  W  P  I  *  I  S  T  L  M  R  H  D  M  A  L  S  T  L  S  A  G  L  I  S  G  L  V  L  A  V  L  G  L  E  L  V  F  L  G  M  R  N  S  *  L  S  P  C  P  I  P  L  F  I  W  H  I  T  Q  W  H  T  S  C  R  K  G  T  C  M  V  M  I  V  L  Q  *  N  Q  S  T  *  Q  M  R  S  G  N  S  C  S  V  M  G  L  F  L  K  I  L  I  Y  L  L  L  F  *  R  R  *  S  R  N  F  S  T  G  I  H  S  I  L  E  F  L  A  R  I  L  F  R  I  I  L  P  F  A  S  I  T  T  L  P  S  S  L  S  T  T  G  H  V  V  S  D  A  M  G  I  *  C  L  T  L  R  R  C  L  S  P  L  G  I  S  E  H  S  G  R  Q  L  K  S  F  Q  L  M  P  H  A  F  L  L  L  M  R  V  M  G  W  T  M  L  I  L  S  L  K  Q  L  M  L  L  S  Y  V  L  Q  K  K  *  H  G  C  R  K  S  L  M  Q  R  H  L  *  E  L  G  L  H  P  H  M  L  T  A  Y  L  L  M  K  *  I  L  Q  *  G  L  Q  R  R  T  I  V  S  T  C  S  G  M  L  *  K  L  V  F  M  I  F  R  L  P  E  M  S  I  G  S  P  V  V  Q  E  A  *  T  G  I  C  Y  G  D  L  W  M  F  K  H  D  L  L  L  L  S  V  H  T  M  L  S  M  P  G  E  S  F  *  R  R  M  V  M  A  S  K  L  A  G  Q  R  L  I  C  Q  I  L  A  L  R  R  P  T  N  I  C  K  T  R  L  S  R  *  G  S  C  F  R  S  K  F  L  V  Q  R  K  E  M  P  I  *  L  A  K  T  N  L  L  W  A  W  Y  M  W  M  S  S  I  V  D  G  K  R  N  V  W  E  S  C  R  G  N  S  T  L  Q  L  A  P  L  H  L  T  K  K  S  S  P  N  C  R  R  V  R  S  G  N  K  A  T  S  N  K  Y  K  S  C  V  C  H  S  *  G  S  R  K  T  K  *  W  L  L  G  F  K  H  W  T  *  S  F  R  L  V  R  L  K  S  L  R  R  T  R  S  *  S  R  D  S  L  V  L  R  H  W  R  S  Y  L  *  Q  M  M  L  *  R  E  Q  G  L  M  L  Q  L  *  S  R  I  L  P  H  Q  E  I  Q  L  L  S  F  S  E  *  I  I  F  A  A  *  V  L  *  *  T  S  L  V  *  D  L  H  D  V  I  L  S  F  *  I  F  F  V  R  A  F  C  L  H  S  I  T  C  *  H  S  R  S  K  L  M  V  Y  L  L  Q  S  *  Y  G  A  A  A  I  I  S  P  Q  *  Y  S  L  S  R  N  L  T  I  *  A  S  L  S  L  P  F  Y  K  V  F  L  V  V  S  S  F  D  H  F  C  L  *  L  D  C  L  L  M  L  Y  K  L  F  K  Y  D  C  F  L  L  S  N  L  R  N  F  I  F  *  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85" stop="1851"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1764</number_coding_nucleotides>
                  <number_encoded_amino_acids>588</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VQEAKGLIRSNLLESNQAVVYSEPEKKVMSRSGDECVVALTDQWYITYGESEWRKAAEECLANMNLYSDETRHGFEHTLSWLNQWACSRSFGLGTRIPWDEEFLVESLSDSTIYMAYYTVAHFLQKGDMYGNDRSSVKPEHLTDEVWEFLFCDGPFPENSYISSSLLKEMKQEFLYWYPFDLRVSGKDLIQNHLTFCIYNHTALFPKHHWPRGFRCNGHIMLNSEKMSKSTGNFRTLRQAIEEFSADATRFSLADAGDGMDDANFVFETANAAILRLTKEIAWMQEVLDAETSLRTGPPSTYADRVFANEINIAVRTTEKNYSEYMFRDALKTGFYDLQAARDEYRLSCGSGGMNRDLLWRFMDVQTRLIAPICPHYAEYAWRKLLKKDGYGIKAGWPEADLPDLSLKKANKYLQDTIVSMRKLLQKQVSGSKKGNANLTSQNKPSVGLVYVDEQYSGWKKECLGILQRKFDTSTGSFAPDKEILSELQKSEIGQQGNFKQIQKLCMPFLRFKKDEVVAVGVQALDLKLPFGEIEVLEKNSELIKRQLGLETLEILSMTDDALERAGPHAAVVKQNPPSPGNPTAIFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="17632" PGL_stop="18018"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17632" e_stop="18018"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="17632" e_stop="18018" e_length="387"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17632" stop="18018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338242" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTATAACACATTATCAACACGAGTCTCTAGCCAATTAAGATTGTGTTTTAGTTTTTTCTTTAACACATGTTTTGGTTGATCTCGTTATGAGAATCAAGGTATTATATGCATAAAATCAGGTATGTATATACTAAAATATTTTTATGATTTAGAATATTATAGTATTCAATCACTAACAATTATCAGGAACCAAAGGCATATACTACTATTGGTTGAATATGACATGCTATACAAAACTTCTTAAATGGAAGAAGGTATAAAATTTTAATAGCATGAGTTTGAATATTATTTTGATTGTTTTGAAAGTCTCAAAGAATAAATCATGTTGTACTTCGGTTTATTATACCGTTGGTTAAGGGTAAGACGATGGATTCAAGTTTCATCG</gDNA_template>
            <first_frame> F  Y  N  T  L  S  T  R  V  S  S  Q  L  R  L  C  F  S  F  F  F  N  T  C  F  G  *  S  R  Y  E  N  Q  G  I  I  C  I  K  S  G  M  Y  I  L  K  Y  F  Y  D  L  E  Y  Y  S  I  Q  S  L  T  I  I  R  N  Q  R  H  I  L  L  L  V  E  Y  D  M  L  Y  K  T  S  *  M  E  E  G  I  K  F  *  *  H  E  F  E  Y  Y  F  D  C  F  E  S  L  K  E  *  I  M  L  Y  F  G  L  L  Y  R  W  L  R  V  R  R  W  I  Q  V  S  S </first_frame>
            <second_frame>  F  I  T  H  Y  Q  H  E  S  L  A  N  *  D  C  V  L  V  F  S  L  T  H  V  L  V  D  L  V  M  R  I  K  V  L  Y  A  *  N  Q  V  C  I  Y  *  N  I  F  M  I  *  N  I  I  V  F  N  H  *  Q  L  S  G  T  K  G  I  Y  Y  Y  W  L  N  M  T  C  Y  T  K  L  L  K  W  K  K  V  *  N  F  N  S  M  S  L  N  I  I  L  I  V  L  K  V  S  K  N  K  S  C  C  T  S  V  Y  Y  T  V  G  *  G  *  D  D  G  F  K  F  H   </second_frame>
            <third_frame>   L  *  H  I  I  N  T  S  L  *  P  I  K  I  V  F  *  F  F  L  *  H  M  F  W  L  I  S  L  *  E  S  R  Y  Y  M  H  K  I  R  Y  V  Y  T  K  I  F  L  *  F  R  I  L  *  Y  S  I  T  N  N  Y  Q  E  P  K  A  Y  T  T  I  G  *  I  *  H  A  I  Q  N  F  L  N  G  R  R  Y  K  I  L  I  A  *  V  *  I  L  F  *  L  F  *  K  S  Q  R  I  N  H  V  V  L  R  F  I  I  P  L  V  K  G  K  T  M  D  S  S  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0163K16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="18079" PGL_stop="18856"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18079" e_stop="18856"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="18079" e_stop="18856" e_length="778"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18079" stop="18856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354965" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATAAGACGATAGATTCAAGTACTATTGCACCAAAAGGGTAAGACATCAATTAGAGTTTTGATGCACCGTGATTGGGTTCAAGTCTCATAGAATTATGGCGTAACACGCCTTATATGGGTAAGACATTGAGTTTGAGCCAATGCACCATAGTGATGATAAAATGATGACTAAGAAAAATAATATATTTTTGATGAAATGTCTTGAAATTCATCATATTGAATTTGCTCCATTCCTTGAAAAGAATGTGGTAGAAACATGTGATAACTCTGAAATCCACCTGTTGACTTGCTCCATTCAATCATATGAATGTGGTAGCAGCGAATGATTAGTCGGAAAGATGAAAAAAAATTAATAATATGAATAAGAGTGTGGAGGGACAAAATTATAATAGTTATCATTGTGGTAATGATAAAAGGAAGAACACTATGAGTTCTTCAAATAGTCCTTCAAAATGAGAAGACAATTTTTATTAGCAAAATGGTATGAAAGGTCATTAGACTTGTGAATGTTGTCAACCCAATAATTTGACAAGTTTATAAATCCTCTATCATGATACAAGAAGATAAAGTGATGGTACACTTGATCTTTCAAAGTGATGTTGAGGTGTGTTATAGAAATATGATGAATTTTAAAGCCATGACAATGTGCTTATAATGCAAATTTATGAAGTACATATAACTAATTAGTCCATTCCTTGAAGAGAATGTGACTTGTGATGAGTATCGTGAATGCTCGACCATTCTATAAGAGAATGGGTCCAGATGTGATAAAATCATT</gDNA_template>
            <first_frame> D  K  T  I  D  S  S  T  I  A  P  K  G  *  D  I  N  *  S  F  D  A  P  *  L  G  S  S  L  I  E  L  W  R  N  T  P  Y  M  G  K  T  L  S  L  S  Q  C  T  I  V  M  I  K  *  *  L  R  K  I  I  Y  F  *  *  N  V  L  K  F  I  I  L  N  L  L  H  S  L  K  R  M  W  *  K  H  V  I  T  L  K  S  T  C  *  L  A  P  F  N  H  M  N  V  V  A  A  N  D  *  S  E  R  *  K  K  I  N  N  M  N  K  S  V  E  G  Q  N  Y  N  S  Y  H  C  G  N  D  K  R  K  N  T  M  S  S  S  N  S  P  S  K  *  E  D  N  F  Y  *  Q  N  G  M  K  G  H  *  T  C  E  C  C  Q  P  N  N  L  T  S  L  *  I  L  Y  H  D  T  R  R  *  S  D  G  T  L  D  L  S  K  *  C  *  G  V  L  *  K  Y  D  E  F  *  S  H  D  N  V  L  I  M  Q  I  Y  E  V  H  I  T  N  *  S  I  P  *  R  E  C  D  L  *  *  V  S  *  M  L  D  H  S  I  R  E  W  V  Q  M  *  *  N  H  </first_frame>
            <second_frame>  I  R  R  *  I  Q  V  L  L  H  Q  K  G  K  T  S  I  R  V  L  M  H  R  D  W  V  Q  V  S  *  N  Y  G  V  T  R  L  I  W  V  R  H  *  V  *  A  N  A  P  *  *  *  *  N  D  D  *  E  K  *  Y  I  F  D  E  M  S  *  N  S  S  Y  *  I  C  S  I  P  *  K  E  C  G  R  N  M  *  *  L  *  N  P  P  V  D  L  L  H  S  I  I  *  M  W  *  Q  R  M  I  S  R  K  D  E  K  K  L  I  I  *  I  R  V  W  R  D  K  I  I  I  V  I  I  V  V  M  I  K  G  R  T  L  *  V  L  Q  I  V  L  Q  N  E  K  T  I  F  I  S  K  M  V  *  K  V  I  R  L  V  N  V  V  N  P  I  I  *  Q  V  Y  K  S  S  I  M  I  Q  E  D  K  V  M  V  H  L  I  F  Q  S  D  V  E  V  C  Y  R  N  M  M  N  F  K  A  M  T  M  C  L  *  C  K  F  M  K  Y  I  *  L  I  S  P  F  L  E  E  N  V  T  C  D  E  Y  R  E  C  S  T  I  L  *  E  N  G  S  R  C  D  K  I  I </second_frame>
            <third_frame>   *  D  D  R  F  K  Y  Y  C  T  K  R  V  R  H  Q  L  E  F  *  C  T  V  I  G  F  K  S  H  R  I  M  A  *  H  A  L  Y  G  *  D  I  E  F  E  P  M  H  H  S  D  D  K  M  M  T  K  K  N  N  I  F  L  M  K  C  L  E  I  H  H  I  E  F  A  P  F  L  E  K  N  V  V  E  T  C  D  N  S  E  I  H  L  L  T  C  S  I  Q  S  Y  E  C  G  S  S  E  *  L  V  G  K  M  K  K  N  *  *  Y  E  *  E  C  G  G  T  K  L  *  *  L  S  L  W  *  *  *  K  E  E  H  Y  E  F  F  K  *  S  F  K  M  R  R  Q  F  L  L  A  K  W  Y  E  R  S  L  D  L  *  M  L  S  T  Q  *  F  D  K  F  I  N  P  L  S  *  Y  K  K  I  K  *  W  Y  T  *  S  F  K  V  M  L  R  C  V  I  E  I  *  *  I  L  K  P  *  Q  C  A  Y  N  A  N  L  *  S  T  Y  N  *  L  V  H  S  L  K  R  M  *  L  V  M  S  I  V  N  A  R  P  F  Y  K  R  M  G  P  D  V  I  K  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18201" stop="18404"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DIEFEPMHHSDDKMMTKKNNIFLMKCLEIHHIEFAPFLEKNVVETCDNSEIHLLTCSIQSYECGSSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="18911" PGL_stop="18237"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18911" e_stop="18237"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="18911" e_stop="18237" e_length="675"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18911" stop="18237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18910" stop="18541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204533" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTTTTTTTCTCAAACCTTCCATAGAGGTGAGTTGTGGCATATATCCAACCCATAATGATTTTATCACATCTGGACCCATTCTCTTATAGAATGGTCGAGCATTCACGATACTCATCACAAGTCACATTCTCTTCAAGGAATGGACTAATTAGTTATATGTACTTCATAAATTTGCATTATAAGCACATTGTCATGGCTTTAAAATTCATCATATTTCTATAACACACCTCAACATCACTTTGAAAGATCAAGTGTACCATCACTTTATCTTCTTGTATCATGATAGAGGATTTATAAACTTGTCAAATTATTGGGTTGACAACATTCACAAGTCTAATGACCTTTCATACCATTTTGCTAATAAAAATTGTCTTCTCATTTTGAAGGACTATTTGAAGAACTCATAGTGTTCTTCCTTTTATCATTACCACAATGATAACTATTATAATTTTGTCCCTCCACACTCTTATTCATATTATTAATTTTTTTTCATCTTTCCGACTAATCATTCGCTGCTACCACATTCATATGATTGAATGGAGCAAGTCAACAGGTGGATTTCAGAGTTATCACATGTTTCTACCACATTCTTTTCAAGGAATGGAGCAAATTCAATATGATGAATTTCAAGACATTTCATCAAAAATATATTATTTTTCTTAGTCATCATTTT</gDNA_template>
            <first_frame> I  F  F  S  Q  T  F  H  R  G  E  L  W  H  I  S  N  P  *  *  F  Y  H  I  W  T  H  S  L  I  E  W  S  S  I  H  D  T  H  H  K  S  H  S  L  Q  G  M  D  *  L  V  I  C  T  S  *  I  C  I  I  S  T  L  S  W  L  *  N  S  S  Y  F  Y  N  T  P  Q  H  H  F  E  R  S  S  V  P  S  L  Y  L  L  V  S  *  *  R  I  Y  K  L  V  K  L  L  G  *  Q  H  S  Q  V  *  *  P  F  I  P  F  C  *  *  K  L  S  S  H  F  E  G  L  F  E  E  L  I  V  F  F  L  L  S  L  P  Q  *  *  L  L  *  F  C  P  S  T  L  L  F  I  L  L  I  F  F  H  L  S  D  *  S  F  A  A  T  T  F  I  *  L  N  G  A  S  Q  Q  V  D  F  R  V  I  T  C  F  Y  H  I  L  F  K  E  W  S  K  F  N  M  M  N  F  K  T  F  H  Q  K  Y  I  I  F  L  S  H  H  F </first_frame>
            <second_frame>  F  F  F  L  K  P  S  I  E  V  S  C  G  I  Y  P  T  H  N  D  F  I  T  S  G  P  I  L  L  *  N  G  R  A  F  T  I  L  I  T  S  H  I  L  F  K  E  W  T  N  *  L  Y  V  L  H  K  F  A  L  *  A  H  C  H  G  F  K  I  H  H  I  S  I  T  H  L  N  I  T  L  K  D  Q  V  Y  H  H  F  I  F  L  Y  H  D  R  G  F  I  N  L  S  N  Y  W  V  D  N  I  H  K  S  N  D  L  S  Y  H  F  A  N  K  N  C  L  L  I  L  K  D  Y  L  K  N  S  *  C  S  S  F  Y  H  Y  H  N  D  N  Y  Y  N  F  V  P  P  H  S  Y  S  Y  Y  *  F  F  F  I  F  P  T  N  H  S  L  L  P  H  S  Y  D  *  M  E  Q  V  N  R  W  I  S  E  L  S  H  V  S  T  T  F  F  S  R  N  G  A  N  S  I  *  *  I  S  R  H  F  I  K  N  I  L  F  F  L  V  I  I   </second_frame>
            <third_frame>   F  F  F  S  N  L  P  *  R  *  V  V  A  Y  I  Q  P  I  M  I  L  S  H  L  D  P  F  S  Y  R  M  V  E  H  S  R  Y  S  S  Q  V  T  F  S  S  R  N  G  L  I  S  Y  M  Y  F  I  N  L  H  Y  K  H  I  V  M  A  L  K  F  I  I  F  L  *  H  T  S  T  S  L  *  K  I  K  C  T  I  T  L  S  S  C  I  M  I  E  D  L  *  T  C  Q  I  I  G  L  T  T  F  T  S  L  M  T  F  H  T  I  L  L  I  K  I  V  F  S  F  *  R  T  I  *  R  T  H  S  V  L  P  F  I  I  T  T  M  I  T  I  I  I  L  S  L  H  T  L  I  H  I  I  N  F  F  S  S  F  R  L  I  I  R  C  Y  H  I  H  M  I  E  W  S  K  S  T  G  G  F  Q  S  Y  H  M  F  L  P  H  S  F  Q  G  M  E  Q  I  Q  Y  D  E  F  Q  D  I  S  S  K  I  Y  Y  F  S  *  S  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18513" stop="18247"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTHSVLPFIITTMITIIILSLHTLIHIINFFSSFRLIIRCYHIHMIEWSKSTGGFQSYHMFLPHSFQGMEQIQYDEFQDISSKIYYFS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18727" stop="18503"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AHCHGFKIHHISITHLNITLKDQVYHHFIFLYHDRGFINLSNYWVDNIHKSNDLSYHFANKNCLLILKDYLKNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="21032" PGL_stop="20356"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21032" e_stop="20356"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.923"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="21032" e_stop="20356" e_length="677"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21032" stop="20356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21032" stop="20630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273387" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCAGACACCTCGATTGTTTCAAGGATTTTCATATAACCTTTATTGTCTAGCTAGACATTACAATTATTTATTATATGCATTCAAGTTTTTCATATGTTGCCAGATCAAAACAAACCTCATTGCATCCACCAAAGGAGAAAACATCTCTAATAATGTCAGGATTTTTGCGATAAATCTTTATGCCCCAAGGCACAAAACATATTTGATATCTTACGGTTATACTATCGCATTATAATTTATTTGTACCCCACTGACATTATACCTTTATTTATGGACTATCAGTCCAAAATGTCACTTTTCTAAGTGAAACAAAATATACTTGAATTGTGCATTTTACTTGGCCAACCATTTATCTGTCCACACTATATGACAGATTTGAATTCAAGATCCTCGTCACAATTTATATCATTGAGCGCTACCTCATATCAAAGATACCATCGACGGTTATTTGATATCGATTCCAACAAGACATAACTTATTCGAGATCTCTTCATATTTCATTATTTCATGTACATGAACCTTTTTCAAGAATTTATGAAGTGTTATGTCAATATGCTCATTTATAGCACTTGCCTCATTATCATGACCATATTGATCATTTGCTCCTTCCTTCTTTAAGGAAATTTATATTTGGAATCGAATGGTCTATAACGTTTTCGGTGTGTCATAGACTCTG</gDNA_template>
            <first_frame> F  R  H  L  D  C  F  K  D  F  H  I  T  F  I  V  *  L  D  I  T  I  I  Y  Y  M  H  S  S  F  S  Y  V  A  R  S  K  Q  T  S  L  H  P  P  K  E  K  T  S  L  I  M  S  G  F  L  R  *  I  F  M  P  Q  G  T  K  H  I  *  Y  L  T  V  I  L  S  H  Y  N  L  F  V  P  H  *  H  Y  T  F  I  Y  G  L  S  V  Q  N  V  T  F  L  S  E  T  K  Y  T  *  I  V  H  F  T  W  P  T  I  Y  L  S  T  L  Y  D  R  F  E  F  K  I  L  V  T  I  Y  I  I  E  R  Y  L  I  S  K  I  P  S  T  V  I  *  Y  R  F  Q  Q  D  I  T  Y  S  R  S  L  H  I  S  L  F  H  V  H  E  P  F  S  R  I  Y  E  V  L  C  Q  Y  A  H  L  *  H  L  P  H  Y  H  D  H  I  D  H  L  L  L  P  S  L  R  K  F  I  F  G  I  E  W  S  I  T  F  S  V  C  H  R  L   </first_frame>
            <second_frame>  S  D  T  S  I  V  S  R  I  F  I  *  P  L  L  S  S  *  T  L  Q  L  F  I  I  C  I  Q  V  F  H  M  L  P  D  Q  N  K  P  H  C  I  H  Q  R  R  K  H  L  *  *  C  Q  D  F  C  D  K  S  L  C  P  K  A  Q  N  I  F  D  I  L  R  L  Y  Y  R  I  I  I  Y  L  Y  P  T  D  I  I  P  L  F  M  D  Y  Q  S  K  M  S  L  F  *  V  K  Q  N  I  L  E  L  C  I  L  L  G  Q  P  F  I  C  P  H  Y  M  T  D  L  N  S  R  S  S  S  Q  F  I  S  L  S  A  T  S  Y  Q  R  Y  H  R  R  L  F  D  I  D  S  N  K  T  *  L  I  R  D  L  F  I  F  H  Y  F  M  Y  M  N  L  F  Q  E  F  M  K  C  Y  V  N  M  L  I  Y  S  T  C  L  I  I  M  T  I  L  I  I  C  S  F  L  L  *  G  N  L  Y  L  E  S  N  G  L  *  R  F  R  C  V  I  D  S  </second_frame>
            <third_frame>   Q  T  P  R  L  F  Q  G  F  S  Y  N  L  Y  C  L  A  R  H  Y  N  Y  L  L  Y  A  F  K  F  F  I  C  C  Q  I  K  T  N  L  I  A  S  T  K  G  E  N  I  S  N  N  V  R  I  F  A  I  N  L  Y  A  P  R  H  K  T  Y  L  I  S  Y  G  Y  T  I  A  L  *  F  I  C  T  P  L  T  L  Y  L  Y  L  W  T  I  S  P  K  C  H  F  S  K  *  N  K  I  Y  L  N  C  A  F  Y  L  A  N  H  L  S  V  H  T  I  *  Q  I  *  I  Q  D  P  R  H  N  L  Y  H  *  A  L  P  H  I  K  D  T  I  D  G  Y  L  I  S  I  P  T  R  H  N  L  F  E  I  S  S  Y  F  I  I  S  C  T  *  T  F  F  K  N  L  *  S  V  M  S  I  C  S  F  I  A  L  A  S  L  S  *  P  Y  *  S  F  A  P  S  F  F  K  E  I  Y  I  W  N  R  M  V  Y  N  V  F  G  V  S  *  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21030" stop="20797"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTPRLFQGFSYNLYCLARHYNYLLYAFKFFICCQIKTNLIASTKGENISNNVRIFAINLYAPRHKTYLISYGYTIAL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="20638" PGL_stop="21453"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20638" e_stop="21453"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="20638" e_stop="21453" e_length="816"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20638" stop="21315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20639" stop="21193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205808" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20643" stop="21096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202657" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20687" stop="21269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21045" stop="21453"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289962" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACGAGGATCTTGAATTCAAATCTGTCATATAGTGTGGACAGATAAATGGTTGGCCAAGTAAAATGCACAATTCAAGTATATTTTGTTTCACTTAGAAAAGTGACATTTTGGACTGATAGTCCATAAATAAAGGTATAATGTCAGTGGGGTACAAATAAATTATAATGCGATAGTATAACCGTAAGATATCAAATATGTTTTGTGCCTTGGGGCATAAAGATTTATCGCAAAAATCCTGACATTATTAGAGATGTTTTCTCCTTTGGTGGATGCAATGAGGTTTGTTTTGATCTGGCAACATATGAAAAACTTGAATGCATATAATAAATAATTGTAATGTCTAGCTAGACAATAAAGGTTATATGAAAATCCTTGAAACAATCGAGGTGTCTGAAGCATATAAGAGTTTGAAAGAAACTTTTTCAATAAAGCTTGAAGAATCCTTATATGGATTGAAATAGTCAAGGAAGAAAAATGGTACAAAAGAATGGCCCTAATTGTCCTTGTATTTTTATGAAAAAATCTTGGTAAGGCAAAATTTTATCTTGACCTACAGATTGATAATTTGACAAATGAAATATTTGTTTAACAGTGCACATACACTGAAAAGTTTTGATGCAATTTTATATGGATAAATCGCATTCATTGAGTACCCCAATGATTATGAGATCACTTGACATAAATGATGATTCAATTTGATCTCAAAAGAAGGATGAAGAGTTTCTTGGTGATGAAACTCTATCTTGGCGCAATTAGGGCACTAGTGCATCTTACTAACAATATTTGACCAGATATTTGTTTTGCAGTAAATTTACT</gDNA_template>
            <first_frame> T  R  I  L  N  S  N  L  S  Y  S  V  D  R  *  M  V  G  Q  V  K  C  T  I  Q  V  Y  F  V  S  L  R  K  V  T  F  W  T  D  S  P  *  I  K  V  *  C  Q  W  G  T  N  K  L  *  C  D  S  I  T  V  R  Y  Q  I  C  F  V  P  W  G  I  K  I  Y  R  K  N  P  D  I  I  R  D  V  F  S  F  G  G  C  N  E  V  C  F  D  L  A  T  Y  E  K  L  E  C  I  *  *  I  I  V  M  S  S  *  T  I  K  V  I  *  K  S  L  K  Q  S  R  C  L  K  H  I  R  V  *  K  K  L  F  Q  *  S  L  K  N  P  Y  M  D  *  N  S  Q  G  R  K  M  V  Q  K  N  G  P  N  C  P  C  I  F  M  K  K  S  W  *  G  K  I  L  S  *  P  T  D  *  *  F  D  K  *  N  I  C  L  T  V  H  I  H  *  K  V  L  M  Q  F  Y  M  D  K  S  H  S  L  S  T  P  M  I  M  R  S  L  D  I  N  D  D  S  I  *  S  Q  K  K  D  E  E  F  L  G  D  E  T  L  S  W  R  N  *  G  T  S  A  S  Y  *  Q  Y  L  T  R  Y  L  F  C  S  K  F  T </first_frame>
            <second_frame>  R  G  S  *  I  Q  I  C  H  I  V  W  T  D  K  W  L  A  K  *  N  A  Q  F  K  Y  I  L  F  H  L  E  K  *  H  F  G  L  I  V  H  K  *  R  Y  N  V  S  G  V  Q  I  N  Y  N  A  I  V  *  P  *  D  I  K  Y  V  L  C  L  G  A  *  R  F  I  A  K  I  L  T  L  L  E  M  F  S  P  L  V  D  A  M  R  F  V  L  I  W  Q  H  M  K  N  L  N  A  Y  N  K  *  L  *  C  L  A  R  Q  *  R  L  Y  E  N  P  *  N  N  R  G  V  *  S  I  *  E  F  E  R  N  F  F  N  K  A  *  R  I  L  I  W  I  E  I  V  K  E  E  K  W  Y  K  R  M  A  L  I  V  L  V  F  L  *  K  N  L  G  K  A  K  F  Y  L  D  L  Q  I  D  N  L  T  N  E  I  F  V  *  Q  C  T  Y  T  E  K  F  *  C  N  F  I  W  I  N  R  I  H  *  V  P  Q  *  L  *  D  H  L  T  *  M  M  I  Q  F  D  L  K  R  R  M  K  S  F  L  V  M  K  L  Y  L  G  A  I  R  A  L  V  H  L  T  N  N  I  *  P  D  I  C  F  A  V  N  L   </second_frame>
            <third_frame>   E  D  L  E  F  K  S  V  I  *  C  G  Q  I  N  G  W  P  S  K  M  H  N  S  S  I  F  C  F  T  *  K  S  D  I  L  D  *  *  S  I  N  K  G  I  M  S  V  G  Y  K  *  I  I  M  R  *  Y  N  R  K  I  S  N  M  F  C  A  L  G  H  K  D  L  S  Q  K  S  *  H  Y  *  R  C  F  L  L  W  W  M  Q  *  G  L  F  *  S  G  N  I  *  K  T  *  M  H  I  I  N  N  C  N  V  *  L  D  N  K  G  Y  M  K  I  L  E  T  I  E  V  S  E  A  Y  K  S  L  K  E  T  F  S  I  K  L  E  E  S  L  Y  G  L  K  *  S  R  K  K  N  G  T  K  E  W  P  *  L  S  L  Y  F  Y  E  K  I  L  V  R  Q  N  F  I  L  T  Y  R  L  I  I  *  Q  M  K  Y  L  F  N  S  A  H  T  L  K  S  F  D  A  I  L  Y  G  *  I  A  F  I  E  Y  P  N  D  Y  E  I  T  *  H  K  *  *  F  N  L  I  S  K  E  G  *  R  V  S  W  *  *  N  S  I  L  A  Q  L  G  H  *  C  I  L  L  T  I  F  D  Q  I  F  V  L  Q  *  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0163K16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="57874" PGL_stop="59801"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57874" e_stop="57935"/>
            <exon e_start="58699" e_stop="59152"/>
            <exon e_start="59258" e_stop="59430"/>
            <exon e_start="59527" e_stop="59801"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.608" e_score="0.998"/>
          <exon-intron don_prob="0.974" acc_prob="0.929" e_score="0.913"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57874" e_stop="57935" e_length="62"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.961">
            <gDNA_intron_boundary i_start="57936" i_stop="58698" i_length="763"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="58699" e_stop="59152" e_length="454"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.608">
            <gDNA_intron_boundary i_start="59153" i_stop="59257" i_length="105"/>
          </intron>
          <exon e_serial="3" e_score="0.913">
            <gDNA_exon_boundary e_start="59258" e_stop="59430" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.974" acc_prob="0.929">
            <gDNA_intron_boundary i_start="59431" i_stop="59526" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="0.960">
            <gDNA_exon_boundary e_start="59527" e_stop="59801" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57874" stop="57935"/>
              <exon start="58699" stop="59123"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57892" stop="57935"/>
              <exon start="58699" stop="58928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58882" stop="59152"/>
              <exon start="59258" stop="59430"/>
              <exon start="59527" stop="59801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58882" stop="59152"/>
              <exon start="59258" stop="59430"/>
              <exon start="59527" stop="59729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58882" stop="59152"/>
              <exon start="59258" stop="59430"/>
              <exon start="59527" stop="59651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438730" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGCTTTCTAAGCTACTGCTGCCCATCGGCAGTCATGGTAAACAAGTTCCGCAGGCAAATTG : AGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATATTAAACCCGGTGTATCTTGAGGTTCCCAATGGAGAAGTATGGGAGGTTGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATTACTCAATAAGACGCGGGAACTTTTTTATGTTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGAAGAGTCTCAACTGAATGTAGTTTCACTAG : TAATAAGTGAAGATTGTGAGGAGCAACAATCCAACATTGTTACCAGTAAGAGAAAGGAAGAGAGGGATGAAGGGACAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAAACCACACGCTCTG : TACATTCCGTTGAAATTTGCTAGGATGTATTTAATGCGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGTCTGTCAAATGTGTTATGCTAAGGAAAGATGCTAAAGTTACTTGTGGTTGGAAGGCGTTCGTTCTGGACAATAAGTTAAAATATGGTGATGTTTGTGTCTTTGAAGTAATTAATGACACTAAGCTTTCCTTGATAGATGTCACCATATTTCCAGGAATTTCTGATGGTACAAACTGAGTCTATCAATGCTG</gDNA_template>
            <first_frame> M  L  S  K  L  L  L  P  I  G  S  H  G  K  Q  V  P  Q  A  N  * :   G  F  Q  K  D  L  P  A  D  I  A  R  T  Y  *  T  R  C  I  L  R  F  P  M  E  K  Y  G  R  L  N  W  N  I  L  K  A  T  F  G  *  L  K  A  G  R  I  S  A  T  I  T  Q  *  D  A  G  T  F  L  C  S  D  T  M  L  V  L  I  L  M  S  L  Y  L  I  L  V  Q  Q  K  L  N  I  H  Q  Q  R  L  S  R  M  I  L  *  I  Y  R  M  W  L  S  I  L  L  N  I  *  A  M  T  P  *  *  R  R  E  K  E  *  D  K  K  G  K  K  R  M  I  F  Q  L  N  V  K  L  L  *  L  M  K  K  S  L  N  *  M  *  F  H  *  :  *  *  V  K  I  V  R  S  N  N  P  T  L  L  P  V  R  E  R  K  R  G  M  K  G  Q  L  I  T  I  K  E  Q  K  L  L  N  L  R  I  H  S  L  Y  L  L  C  I  H  R  M  S  R  N  H  T  L  C :   T  F  R  *  N  L  L  G  C  I  *  C  G  T  V  A  I  *  C  C  V  F  Q  G  K  D  L  G  L  S  N  V  L  C  *  G  K  M  L  K  L  L  V  V  G  R  R  S  F  W  T  I  S  *  N  M  V  M  F  V  S  L  K  *  L  M  T  L  S  F  P  *  *  M  S  P  Y  F  Q  E  F  L  M  V  Q  T  E  S  I  N  A  </first_frame>
            <second_frame>  C  F  L  S  Y  C  C  P  S  A  V  M  V  N  K  F  R  R  Q  I   : E  D  S  K  R  I  C  Q  Q  I  L  Q  E  H  I  K  P  G  V  S  *  G  S  Q  W  R  S  M  G  G  *  T  G  T  F  *  R  P  H  L  A  S  *  R  L  E  G  F  Q  R  L  L  L  N  K  T  R  E  L  F  Y  V  R  I  Q  C  S  F  S  F  *  C  H  Y  I  *  F  *  C  S  R  N  *  I  S  T  S  R  D  *  V  G  *  F  Y  R  Y  I  G  C  G  *  V  F  F  *  I  S  E  P  *  P  L  S  E  G  E  K  K  N  K  T  R  R  G  R  R  E  *  Y  S  S  *  T  S  N  Y  C  N  *  *  R  R  V  S  T  E  C  S  F  T  S :   N  K  *  R  L  *  G  A  T  I  Q  H  C  Y  Q  *  E  K  G  R  E  G  *  R  D  S  *  *  L  S  K  S  K  S  F  *  I  *  E  S  I  H  C  I  F  Y  A  S  I  V  C  L  E  T  T  R  S   : V  H  S  V  E  I  C  *  D  V  F  N  A  E  Q  W  Q  F  S  V  A  C  S  R  E  R  I  L  V  C  Q  M  C  Y  A  K  E  R  C  *  S  Y  L  W  L  E  G  V  R  S  G  Q  *  V  K  I  W  *  C  L  C  L  *  S  N  *  *  H  *  A  F  L  D  R  C  H  H  I  S  R  N  F  *  W  Y  K  L  S  L  S  M  L </second_frame>
            <third_frame>   A  F  *  A  T  A  A  H  R  Q  S  W  *  T  S  S  A  G  K  L  :  R  I  P  K  G  F  A  S  R  Y  C  K  N  I  L  N  P  V  Y  L  E  V  P  N  G  E  V  W  E  V  E  L  E  H  S  E  G  H  I  W  L  A  E  G  W  K  D  F  S  D  Y  Y  S  I  R  R  G  N  F  F  M  F  G  Y  N  A  R  S  H  F  N  V  T  I  F  D  F  S  A  A  E  I  E  Y  P  P  A  E  I  E  S  D  D  S  I  D  I  S  D  V  V  E  Y  S  S  E  Y  L  S  H  D  P  L  V  K  E  R  K  R  I  R  Q  E  G  E  E  E  N  D  I  P  V  E  R  Q  T  I  V  I  D  E  E  E  S  Q  L  N  V  V  S  L   : V  I  S  E  D  C  E  E  Q  Q  S  N  I  V  T  S  K  R  K  E  E  R  D  E  G  T  A  D  N  Y  Q  R  A  K  A  F  K  S  K  N  P  F  I  V  S  F  M  H  P  S  Y  V  S  K  P  H  A  L  :  Y  I  P  L  K  F  A  R  M  Y  L  M  R  N  S  G  N  L  V  L  R  V  P  G  K  G  S  W  S  V  K  C  V  M  L  R  K  D  A  K  V  T  C  G  W  K  A  F  V  L  D  N  K  L  K  Y  G  D  V  C  V  F  E  V  I  N  D  T  K  L  S  L  I  D  V  T  I  F  P  G  I  S  D  G  T  N  *  V  Y  Q  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57915" stop="57935"/>
                    <exon start="58699" stop="59152"/>
                    <exon start="59258" stop="59430"/>
                    <exon start="59527" stop="59787"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>906</number_coding_nucleotides>
                  <number_encoded_amino_acids>302</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSSAGKLRIPKGFASRYCKNILNPVYLEVPNGEVWEVELEHSEGHIWLAEGWKDFSDYYSIRRGNFFMFGYNARSHFNVTIFDFSAAEIEYPPAEIESDDSIDISDVVEYSSEYLSHDPLVKERKRIRQEGEEENDIPVERQTIVIDEEESQLNVVSLVISEDCEEQQSNIVTSKRKEERDEGTADNYQRAKAFKSKNPFIVSFMHPSYVSKPHALYIPLKFARMYLMRNSGNLVLRVPGKGSWSVKCVMLRKDAKVTCGWKAFVLDNKLKYGDVCVFEVINDTKLSLIDVTIFPGISDGTN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="57919" e_stop="58015"/>
            <exon e_start="58699" e_stop="59152"/>
            <exon e_start="59258" e_stop="59430"/>
            <exon e_start="59527" e_stop="59801"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.961" e_score="0.938"/>
          <exon-intron don_prob="0.986" acc_prob="0.608" e_score="0.960"/>
          <exon-intron don_prob="0.974" acc_prob="0.929" e_score="0.913"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="57919" e_stop="58015" e_length="97"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.961">
            <gDNA_intron_boundary i_start="58016" i_stop="58698" i_length="683"/>
          </intron>
          <exon e_serial="2" e_score="0.960">
            <gDNA_exon_boundary e_start="58699" e_stop="59152" e_length="454"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.608">
            <gDNA_intron_boundary i_start="59153" i_stop="59257" i_length="105"/>
          </intron>
          <exon e_serial="3" e_score="0.913">
            <gDNA_exon_boundary e_start="59258" e_stop="59430" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.974" acc_prob="0.929">
            <gDNA_intron_boundary i_start="59431" i_stop="59526" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="0.960">
            <gDNA_exon_boundary e_start="59527" e_stop="59801" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57919" stop="58015"/>
              <exon start="58699" stop="59152"/>
              <exon start="59258" stop="59430"/>
              <exon start="59527" stop="59543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58882" stop="59152"/>
              <exon start="59258" stop="59430"/>
              <exon start="59527" stop="59801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58882" stop="59152"/>
              <exon start="59258" stop="59430"/>
              <exon start="59527" stop="59729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58882" stop="59152"/>
              <exon start="59258" stop="59430"/>
              <exon start="59527" stop="59651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438730" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCCGCAGGCAAATTGGTAAAGTCTCTTCCATTTCTTACACTTCTCAACCCAAATTCTGCAAGATCATTTTTAGCCCGCATGAATTATGCCGTCTC : AGGATTCCAAAAGGATTTGCCAGCAGATATTGCAAGAACATATTAAACCCGGTGTATCTTGAGGTTCCCAATGGAGAAGTATGGGAGGTTGAACTGGAACATTCTGAAGGCCACATTTGGCTAGCTGAAGGCTGGAAGGATTTCAGCGACTATTACTCAATAAGACGCGGGAACTTTTTTATGTTCGGATACAATGCTCGTTCTCATTTTAATGTCACTATATTTGATTTTAGTGCAGCAGAAATTGAATATCCACCAGCAGAGATTGAGTCGGATGATTCTATAGATATATCGGATGTGGTTGAGTATTCTTCTGAATATCTGAGCCATGACCCCTTAGTGAAGGAGAGAAAAAGAATAAGACAAGAAGGGGAAGAAGAGAATGATATTCCAGTTGAACGTCAAACTATTGTAATTGATGAAGAAGAGTCTCAACTGAATGTAGTTTCACTAG : TAATAAGTGAAGATTGTGAGGAGCAACAATCCAACATTGTTACCAGTAAGAGAAAGGAAGAGAGGGATGAAGGGACAGCTGATAACTATCAAAGAGCAAAAGCTTTTAAATCTAAGAATCCATTCATTGTATCTTTTATGCATCCATCGTATGTCTCGAAACCACACGCTCTG : TACATTCCGTTGAAATTTGCTAGGATGTATTTAATGCGGAACAGTGGCAATTTAGTGTTGCGTGTTCCAGGGAAAGGATCTTGGTCTGTCAAATGTGTTATGCTAAGGAAAGATGCTAAAGTTACTTGTGGTTGGAAGGCGTTCGTTCTGGACAATAAGTTAAAATATGGTGATGTTTGTGTCTTTGAAGTAATTAATGACACTAAGCTTTCCTTGATAGATGTCACCATATTTCCAGGAATTTCTGATGGTACAAACTGAGTCTATCAATGCTG</gDNA_template>
            <first_frame> V  P  Q  A  N  W  *  S  L  F  H  F  L  H  F  S  T  Q  I  L  Q  D  H  F  *  P  A  *  I  M  P  S   : Q  D  S  K  R  I  C  Q  Q  I  L  Q  E  H  I  K  P  G  V  S  *  G  S  Q  W  R  S  M  G  G  *  T  G  T  F  *  R  P  H  L  A  S  *  R  L  E  G  F  Q  R  L  L  L  N  K  T  R  E  L  F  Y  V  R  I  Q  C  S  F  S  F  *  C  H  Y  I  *  F  *  C  S  R  N  *  I  S  T  S  R  D  *  V  G  *  F  Y  R  Y  I  G  C  G  *  V  F  F  *  I  S  E  P  *  P  L  S  E  G  E  K  K  N  K  T  R  R  G  R  R  E  *  Y  S  S  *  T  S  N  Y  C  N  *  *  R  R  V  S  T  E  C  S  F  T  S :   N  K  *  R  L  *  G  A  T  I  Q  H  C  Y  Q  *  E  K  G  R  E  G  *  R  D  S  *  *  L  S  K  S  K  S  F  *  I  *  E  S  I  H  C  I  F  Y  A  S  I  V  C  L  E  T  T  R  S   : V  H  S  V  E  I  C  *  D  V  F  N  A  E  Q  W  Q  F  S  V  A  C  S  R  E  R  I  L  V  C  Q  M  C  Y  A  K  E  R  C  *  S  Y  L  W  L  E  G  V  R  S  G  Q  *  V  K  I  W  *  C  L  C  L  *  S  N  *  *  H  *  A  F  L  D  R  C  H  H  I  S  R  N  F  *  W  Y  K  L  S  L  S  M  L </first_frame>
            <second_frame>  F  R  R  Q  I  G  K  V  S  S  I  S  Y  T  S  Q  P  K  F  C  K  I  I  F  S  P  H  E  L  C  R  L  :  R  I  P  K  G  F  A  S  R  Y  C  K  N  I  L  N  P  V  Y  L  E  V  P  N  G  E  V  W  E  V  E  L  E  H  S  E  G  H  I  W  L  A  E  G  W  K  D  F  S  D  Y  Y  S  I  R  R  G  N  F  F  M  F  G  Y  N  A  R  S  H  F  N  V  T  I  F  D  F  S  A  A  E  I  E  Y  P  P  A  E  I  E  S  D  D  S  I  D  I  S  D  V  V  E  Y  S  S  E  Y  L  S  H  D  P  L  V  K  E  R  K  R  I  R  Q  E  G  E  E  E  N  D  I  P  V  E  R  Q  T  I  V  I  D  E  E  E  S  Q  L  N  V  V  S  L   : V  I  S  E  D  C  E  E  Q  Q  S  N  I  V  T  S  K  R  K  E  E  R  D  E  G  T  A  D  N  Y  Q  R  A  K  A  F  K  S  K  N  P  F  I  V  S  F  M  H  P  S  Y  V  S  K  P  H  A  L  :  Y  I  P  L  K  F  A  R  M  Y  L  M  R  N  S  G  N  L  V  L  R  V  P  G  K  G  S  W  S  V  K  C  V  M  L  R  K  D  A  K  V  T  C  G  W  K  A  F  V  L  D  N  K  L  K  Y  G  D  V  C  V  F  E  V  I  N  D  T  K  L  S  L  I  D  V  T  I  F  P  G  I  S  D  G  T  N  *  V  Y  Q  C   </second_frame>
            <third_frame>   S  A  G  K  L  V  K  S  L  P  F  L  T  L  L  N  P  N  S  A  R  S  F  L  A  R  M  N  Y  A  V  S :   G  F  Q  K  D  L  P  A  D  I  A  R  T  Y  *  T  R  C  I  L  R  F  P  M  E  K  Y  G  R  L  N  W  N  I  L  K  A  T  F  G  *  L  K  A  G  R  I  S  A  T  I  T  Q  *  D  A  G  T  F  L  C  S  D  T  M  L  V  L  I  L  M  S  L  Y  L  I  L  V  Q  Q  K  L  N  I  H  Q  Q  R  L  S  R  M  I  L  *  I  Y  R  M  W  L  S  I  L  L  N  I  *  A  M  T  P  *  *  R  R  E  K  E  *  D  K  K  G  K  K  R  M  I  F  Q  L  N  V  K  L  L  *  L  M  K  K  S  L  N  *  M  *  F  H  *  :  *  *  V  K  I  V  R  S  N  N  P  T  L  L  P  V  R  E  R  K  R  G  M  K  G  Q  L  I  T  I  K  E  Q  K  L  L  N  L  R  I  H  S  L  Y  L  L  C  I  H  R  M  S  R  N  H  T  L  C :   T  F  R  *  N  L  L  G  C  I  *  C  G  T  V  A  I  *  C  C  V  F  Q  G  K  D  L  G  L  S  N  V  L  C  *  G  K  M  L  K  L  L  V  V  G  R  R  S  F  W  T  I  S  *  N  M  V  M  F  V  S  L  K  *  L  M  T  L  S  F  P  *  *  M  S  P  Y  F  Q  E  F  L  M  V  Q  T  E  S  I  N  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57920" stop="58015"/>
                    <exon start="58699" stop="59152"/>
                    <exon start="59258" stop="59430"/>
                    <exon start="59527" stop="59787"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>981</number_coding_nucleotides>
                  <number_encoded_amino_acids>327</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FRRQIGKVSSISYTSQPKFCKIIFSPHELCRLRIPKGFASRYCKNILNPVYLEVPNGEVWEVELEHSEGHIWLAEGWKDFSDYYSIRRGNFFMFGYNARSHFNVTIFDFSAAEIEYPPAEIESDDSIDISDVVEYSSEYLSHDPLVKERKRIRQEGEEENDIPVERQTIVIDEEESQLNVVSLVISEDCEEQQSNIVTSKRKEERDEGTADNYQRAKAFKSKNPFIVSFMHPSYVSKPHALYIPLKFARMYLMRNSGNLVLRVPGKGSWSVKCVMLRKDAKVTCGWKAFVLDNKLKYGDVCVFEVINDTKLSLIDVTIFPGISDGTN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="61584" PGL_stop="66435"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63007" e_stop="63062"/>
            <exon e_start="63309" e_stop="63455"/>
            <exon e_start="64279" e_stop="64341"/>
            <exon e_start="64424" e_stop="64500"/>
            <exon e_start="64841" e_stop="64946"/>
            <exon e_start="65157" e_stop="65507"/>
            <exon e_start="65611" e_stop="65676"/>
            <exon e_start="65883" e_stop="66435"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.931" e_score="0.982"/>
          <exon-intron don_prob="0.990" acc_prob="0.995" e_score="0.959"/>
          <exon-intron don_prob="0.980" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.630" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.099" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="63007" e_stop="63062" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.931">
            <gDNA_intron_boundary i_start="63063" i_stop="63308" i_length="246"/>
          </intron>
          <exon e_serial="2" e_score="0.959">
            <gDNA_exon_boundary e_start="63309" e_stop="63455" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.995">
            <gDNA_intron_boundary i_start="63456" i_stop="64278" i_length="823"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="64279" e_stop="64341" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.949">
            <gDNA_intron_boundary i_start="64342" i_stop="64423" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64424" e_stop="64500" e_length="77"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.630">
            <gDNA_intron_boundary i_start="64501" i_stop="64840" i_length="340"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64841" e_stop="64946" e_length="106"/>
          </exon>
          <intron i_serial="5" don_prob="0.885" acc_prob="0.966">
            <gDNA_intron_boundary i_start="64947" i_stop="65156" i_length="210"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="65157" e_stop="65507" e_length="351"/>
          </exon>
          <intron i_serial="6" don_prob="0.099" acc_prob="0.999">
            <gDNA_intron_boundary i_start="65508" i_stop="65610" i_length="103"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="65611" e_stop="65676" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.996">
            <gDNA_intron_boundary i_start="65677" i_stop="65882" i_length="206"/>
          </intron>
          <exon e_serial="8" e_score="0.922">
            <gDNA_exon_boundary e_start="65883" e_stop="66435" e_length="553"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63007" stop="63062"/>
              <exon start="63309" stop="63455"/>
              <exon start="64279" stop="64341"/>
              <exon start="64424" stop="64500"/>
              <exon start="64841" stop="64946"/>
              <exon start="65157" stop="65179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244458" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64299" stop="64341"/>
              <exon start="64424" stop="64500"/>
              <exon start="64841" stop="64946"/>
              <exon start="65157" stop="65507"/>
              <exon start="65611" stop="65624"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64300" stop="64341"/>
              <exon start="64424" stop="64500"/>
              <exon start="64841" stop="64946"/>
              <exon start="65157" stop="65507"/>
              <exon start="65611" stop="65676"/>
              <exon start="65883" stop="66101"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E378679" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64300" stop="64341"/>
              <exon start="64424" stop="64500"/>
              <exon start="64841" stop="64946"/>
              <exon start="65157" stop="65406"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65660" stop="65676"/>
              <exon start="65883" stop="66392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422514" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65958" stop="66435"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436222" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTGCAGGTGCATCTACACTGCTAGCCTAGCATCTTCTTTTGATACCAATCTTAAG : AGAGTAAGGTTCTGTACATCAGTTCTCTTCAGTTTAAGCATTGGAGTTGAATTGTTGACTCCTGTATTCCCACAATACTTTTTGATGCTTGCATCAATTGCCAACATTGCCAAGCAAATAAGCCTTGCATGTTACCTAGCAACCAGT : ACTGCTGTTCATAGAAGCTTTGCAATTGCTGATAACCTAGGCGAGGTTTCTGCAAAAGGACAG : ATTCAAACAGTCTGCTTTGATAATCTTGGTCTTACACTTGCTGCAACCCTGAACATACTGTCTGCTAATAATCCAAG : ATTGCAGGCTGGTCTACCATTTGTGATGTACCCTGTCTTCTCTGTGCTTGACCTTTTTGGTATTTATCAAGGACTAAAGCATGTGCATCTGCAGACATTAACTAAG : GATAGGCTTAACATCATTATAAGCACATGGATTCAACAAGGATTTGTCCCATCTCCTGAAGAGGTGAGTAAACAGGAGGGTATTGGCTTATCTTGGAGCAGAGGTAATTTTTAACTTAAATTTTGCCGTAACAAGGCCTTATTGCTTGGTTTATCGCTACATTTTTAGTAAAGGAACATTCTTAATCAGCTTTAATCAGGCAGAGAGCCATGGTCAATCAGAATTGGTTGCTTAAATCCTAGACGTTGCACAGCAAAGCTATCTGTGATGACGATGCAATCTTTGAATAGTGAAGACTTATATTTCTTGAGCCCAGAGAGTTTGACTAGTGAACTGAAAAGGAACCAGGAG : TATGGTGTCCTACTTTCTCTGCGGGAAGGGGCAGAAACTACAGATGTGATCAGGGGCATATTGCAT : GCAAGTTATGTCCGCAAGGGTATAGAAGCTTGTGGTAGTTCTAGTGCAGTTCTCAAGCAATGGTTTAACCTGGTTGAAGATGGCAAGAGGTTAACAGAACAAAACTTGAGTTTCTTGTATGAGCAAATGTTGTCTTTAGGGTGGGCATGTAAGAATATTCTGTTGAGCACGCAGGAGCAAGCCCGCTATAGTTTCATAGCTGACTGAGCATATATCTACTTTCTTCCAGTTATGGTTGATTCGCAAAGATGAAAGTGAATAAAGGGTCAAAGAAAACCAAGACTAGGAGATTTTGTCTTTATATCCTTGTATTTGTATATAATCAAAATTTTGGGTATCAAAAAGAGATGCCTTATACATATCCGTGAGTACTGGCTCCACAAAGAGAGCAGCAAGTGTTGTACAAATTTTGAGTAGCTTTATCTGTCTTGTAGATTAACCGATTGAGGTTAAAACTGTTATCCAACTGACTATTGTTTCCTCATTCATCCATTTTGTCCGAAAGATTTTGTAATCATCTCATCTAAAAGCTTGATAAACATTTTATTTATGA</gDNA_template>
            <first_frame> C  A  G  A  S  T  L  L  A  *  H  L  L  L  I  P  I  L  R :   E  *  G  S  V  H  Q  F  S  S  V  *  A  L  E  L  N  C  *  L  L  Y  S  H  N  T  F  *  C  L  H  Q  L  P  T  L  P  S  K  *  A  L  H  V  T  *  Q  P  V :   L  L  F  I  E  A  L  Q  L  L  I  T  *  A  R  F  L  Q  K  D  R :   F  K  Q  S  A  L  I  I  L  V  L  H  L  L  Q  P  *  T  Y  C  L  L  I  I  Q   : D  C  R  L  V  Y  H  L  *  C  T  L  S  S  L  C  L  T  F  L  V  F  I  K  D  *  S  M  C  I  C  R  H  *  L  R :   I  G  L  T  S  L  *  A  H  G  F  N  K  D  L  S  H  L  L  K  R  *  V  N  R  R  V  L  A  Y  L  G  A  E  V  I  F  N  L  N  F  A  V  T  R  P  Y  C  L  V  Y  R  Y  I  F  S  K  G  T  F  L  I  S  F  N  Q  A  E  S  H  G  Q  S  E  L  V  A  *  I  L  D  V  A  Q  Q  S  Y  L  *  *  R  C  N  L  *  I  V  K  T  Y  I  S  *  A  Q  R  V  *  L  V  N  *  K  G  T  R  S :   M  V  S  Y  F  L  C  G  K  G  Q  K  L  Q  M  *  S  G  A  Y  C  M :   Q  V  M  S  A  R  V  *  K  L  V  V  V  L  V  Q  F  S  S  N  G  L  T  W  L  K  M  A  R  G  *  Q  N  K  T  *  V  S  C  M  S  K  C  C  L  *  G  G  H  V  R  I  F  C  *  A  R  R  S  K  P  A  I  V  S  *  L  T  E  H  I  S  T  F  F  Q  L  W  L  I  R  K  D  E  S  E  *  R  V  K  E  N  Q  D  *  E  I  L  S  L  Y  P  C  I  C  I  *  S  K  F  W  V  S  K  R  D  A  L  Y  I  S  V  S  T  G  S  T  K  R  A  A  S  V  V  Q  I  L  S  S  F  I  C  L  V  D  *  P  I  E  V  K  T  V  I  Q  L  T  I  V  S  S  F  I  H  F  V  R  K  I  L  *  S  S  H  L  K  A  *  *  T  F  Y  L  * </first_frame>
            <second_frame>  V  Q  V  H  L  H  C  *  P  S  I  F  F  *  Y  Q  S  *   : E  S  K  V  L  Y  I  S  S  L  Q  F  K  H  W  S  *  I  V  D  S  C  I  P  T  I  L  F  D  A  C  I  N  C  Q  H  C  Q  A  N  K  P  C  M  L  P  S  N  Q   : Y  C  C  S  *  K  L  C  N  C  *  *  P  R  R  G  F  C  K  R  T   : D  S  N  S  L  L  *  *  S  W  S  Y  T  C  C  N  P  E  H  T  V  C  *  *  S  K  :  I  A  G  W  S  T  I  C  D  V  P  C  L  L  C  A  *  P  F  W  Y  L  S  R  T  K  A  C  A  S  A  D  I  N  *   : G  *  A  *  H  H  Y  K  H  M  D  S  T  R  I  C  P  I  S  *  R  G  E  *  T  G  G  Y  W  L  I  L  E  Q  R  *  F  L  T  *  I  L  P  *  Q  G  L  I  A  W  F  I  A  T  F  L  V  K  E  H  S  *  S  A  L  I  R  Q  R  A  M  V  N  Q  N  W  L  L  K  S  *  T  L  H  S  K  A  I  C  D  D  D  A  I  F  E  *  *  R  L  I  F  L  E  P  R  E  F  D  *  *  T  E  K  E  P  G   : V  W  C  P  T  F  S  A  G  R  G  R  N  Y  R  C  D  Q  G  H  I  A   : C  K  L  C  P  Q  G  Y  R  S  L  W  *  F  *  C  S  S  Q  A  M  V  *  P  G  *  R  W  Q  E  V  N  R  T  K  L  E  F  L  V  *  A  N  V  V  F  R  V  G  M  *  E  Y  S  V  E  H  A  G  A  S  P  L  *  F  H  S  *  L  S  I  Y  L  L  S  S  S  Y  G  *  F  A  K  M  K  V  N  K  G  S  K  K  T  K  T  R  R  F  C  L  Y  I  L  V  F  V  Y  N  Q  N  F  G  Y  Q  K  E  M  P  Y  T  Y  P  *  V  L  A  P  Q  R  E  Q  Q  V  L  Y  K  F  *  V  A  L  S  V  L  *  I  N  R  L  R  L  K  L  L  S  N  *  L  L  F  P  H  S  S  I  L  S  E  R  F  C  N  H  L  I  *  K  L  D  K  H  F  I  Y   </second_frame>
            <third_frame>   C  R  C  I  Y  T  A  S  L  A  S  S  F  D  T  N  L  K  :  R  V  R  F  C  T  S  V  L  F  S  L  S  I  G  V  E  L  L  T  P  V  F  P  Q  Y  F  L  M  L  A  S  I  A  N  I  A  K  Q  I  S  L  A  C  Y  L  A  T  S  :  T  A  V  H  R  S  F  A  I  A  D  N  L  G  E  V  S  A  K  G  Q  :  I  Q  T  V  C  F  D  N  L  G  L  T  L  A  A  T  L  N  I  L  S  A  N  N  P  R :   L  Q  A  G  L  P  F  V  M  Y  P  V  F  S  V  L  D  L  F  G  I  Y  Q  G  L  K  H  V  H  L  Q  T  L  T  K  :  D  R  L  N  I  I  I  S  T  W  I  Q  Q  G  F  V  P  S  P  E  E  V  S  K  Q  E  G  I  G  L  S  W  S  R  G  N  F  *  L  K  F  C  R  N  K  A  L  L  L  G  L  S  L  H  F  *  *  R  N  I  L  N  Q  L  *  S  G  R  E  P  W  S  I  R  I  G  C  L  N  P  R  R  C  T  A  K  L  S  V  M  T  M  Q  S  L  N  S  E  D  L  Y  F  L  S  P  E  S  L  T  S  E  L  K  R  N  Q  E  :  Y  G  V  L  L  S  L  R  E  G  A  E  T  T  D  V  I  R  G  I  L  H  :  A  S  Y  V  R  K  G  I  E  A  C  G  S  S  S  A  V  L  K  Q  W  F  N  L  V  E  D  G  K  R  L  T  E  Q  N  L  S  F  L  Y  E  Q  M  L  S  L  G  W  A  C  K  N  I  L  L  S  T  Q  E  Q  A  R  Y  S  F  I  A  D  *  A  Y  I  Y  F  L  P  V  M  V  D  S  Q  R  *  K  *  I  K  G  Q  R  K  P  R  L  G  D  F  V  F  I  S  L  Y  L  Y  I  I  K  I  L  G  I  K  K  R  C  L  I  H  I  R  E  Y  W  L  H  K  E  S  S  K  C  C  T  N  F  E  *  L  Y  L  S  C  R  L  T  D  *  G  *  N  C  Y  P  T  D  Y  C  F  L  I  H  P  F  C  P  K  D  F  V  I  I  S  S  K  S  L  I  N  I  L  F  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63009" stop="63062"/>
                    <exon start="63309" stop="63455"/>
                    <exon start="64279" stop="64341"/>
                    <exon start="64424" stop="64500"/>
                    <exon start="64841" stop="64946"/>
                    <exon start="65157" stop="65270"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CRCIYTASLASSFDTNLKRVRFCTSVLFSLSIGVELLTPVFPQYFLMLASIANIAKQISLACYLATSTAVHRSFAIADNLGEVSAKGQIQTVCFDNLGLTLAATLNILSANNPRLQAGLPFVMYPVFSVLDLFGIYQGLKHVHLQTLTKDRLNIIISTWIQQGFVPSPEEVSKQEGIGLSWSRGNF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65352" stop="65507"/>
                    <exon start="65611" stop="65676"/>
                    <exon start="65883" stop="66089"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGREPWSIRIGCLNPRRCTAKLSVMTMQSLNSEDLYFLSPESLTSELKRNQEYGVLLSLREGAETTDVIRGILHASYVRKGIEACGSSSAVLKQWFNLVEDGKRLTEQNLSFLYEQMLSLGWACKNILLSTQEQARYSFIAD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="61584" e_stop="62277"/>
            <exon e_start="62916" e_stop="63062"/>
            <exon e_start="63309" e_stop="63455"/>
            <exon e_start="63716" e_stop="63720"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.805" e_score="0.927"/>
          <exon-intron don_prob="0.975" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.400"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="61584" e_stop="62277" e_length="694"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.805">
            <gDNA_intron_boundary i_start="62278" i_stop="62915" i_length="638"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62916" e_stop="63062" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.931">
            <gDNA_intron_boundary i_start="63063" i_stop="63308" i_length="246"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="63309" e_stop="63455" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.986">
            <gDNA_intron_boundary i_start="63456" i_stop="63715" i_length="260"/>
          </intron>
          <exon e_serial="4" e_score="0.400">
            <gDNA_exon_boundary e_start="63716" e_stop="63720" e_length="5"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61584" stop="62277"/>
              <exon start="62916" stop="63003"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61665" stop="62277"/>
              <exon start="62916" stop="63002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460224" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61665" stop="62205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61665" stop="62145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62003" stop="62277"/>
              <exon start="62916" stop="63062"/>
              <exon start="63309" stop="63455"/>
              <exon start="63716" stop="63720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264461" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTCCCTCTAGTTTTAAGAAAGTCTCTTTTATCGGGAATAGAAATATCTACGTAGTAGTAGTGATTAGTGAACCCTGTTATTTCCCGGCGGAAAAGTAAATTGCCGCCGCCGCCGTTGCCGTTGCCGTTGCCGTATTCCGTCTTCAACTTTCTCTTCATCTTCCACAGAACAAGTCAAGAGAATCAGAAATCTCTAAAAGCAAAATTTCATGCAATCCAATTTGTACCCATCAACCCACACCCGTTGTTGTTTCTCATGGAACCCAGACAAACCCCAAATCCCCACACCCAAAATCCTCAAACACAAGCTCAAAACCTCTATTATTTCCCCAGGTGTATCTACTTCTCTGAAGACCTCATTAAATTTTGGGGAAGAAAAGTGTAACAAGCAACAAGAAGAAACTACTCTGCCTTTTTATCTTCCAGTTTCGGTTCGCAAATCAGATAGTCATTCTAGGTATATTTGGGATGGGAAAGACTTGAAGTTGGTATCTGTTGACGGGAATGCTTTTTCGATATCCGATTTCGACTCTAATTTTGAAGATACAGTTCATAAGTTGGTCAGAATTTGTGTTTCGGCAATAAGAAATTTCTTTCTTCCGAGGGAAGTTAGTCGTAATTACCTTGAATACGTGAAGTGGAAGTTTGTTCATCGTGTTTCCAGTTCTGCTCTCCAAGTTCTGGCGACCCAG : GCTATGTTGCGGGCAATTGGAATTGGGAACTCCCGTTCACTTCCATTGGCTGCTGCACTAAATTGGGTCCTGAAGGATGGTCTTGGACGGTTGTGCAGGTGCATCTACACTGCTAGCCTAGCATCTTCTTTTGATACCAATCTTAAG : AGAGTAAGGTTCTGTACATCAGTTCTCTTCAGTTTAAGCATTGGAGTTGAATTGTTGACTCCTGTATTCCCACAATACTTTTTGATGCTTGCATCAATTGCCAACATTGCCAAGCAAATAAGCCTTGCATGTTACCTAGCAACCAGT : AGAGG</gDNA_template>
            <first_frame> I  F  P  L  V  L  R  K  S  L  L  S  G  I  E  I  S  T  *  *  *  *  L  V  N  P  V  I  S  R  R  K  S  K  L  P  P  P  P  L  P  L  P  L  P  Y  S  V  F  N  F  L  F  I  F  H  R  T  S  Q  E  N  Q  K  S  L  K  A  K  F  H  A  I  Q  F  V  P  I  N  P  H  P  L  L  F  L  M  E  P  R  Q  T  P  N  P  H  T  Q  N  P  Q  T  Q  A  Q  N  L  Y  Y  F  P  R  C  I  Y  F  S  E  D  L  I  K  F  W  G  R  K  V  *  Q  A  T  R  R  N  Y  S  A  F  L  S  S  S  F  G  S  Q  I  R  *  S  F  *  V  Y  L  G  W  E  R  L  E  V  G  I  C  *  R  E  C  F  F  D  I  R  F  R  L  *  F  *  R  Y  S  S  *  V  G  Q  N  L  C  F  G  N  K  K  F  L  S  S  E  G  S  *  S  *  L  P  *  I  R  E  V  E  V  C  S  S  C  F  Q  F  C  S  P  S  S  G  D  P   : G  Y  V  A  G  N  W  N  W  E  L  P  F  T  S  I  G  C  C  T  K  L  G  P  E  G  W  S  W  T  V  V  Q  V  H  L  H  C  *  P  S  I  F  F  *  Y  Q  S  *   : E  S  K  V  L  Y  I  S  S  L  Q  F  K  H  W  S  *  I  V  D  S  C  I  P  T  I  L  F  D  A  C  I  N  C  Q  H  C  Q  A  N  K  P  C  M  L  P  S  N  Q   : *  R </first_frame>
            <second_frame>  F  S  L  *  F  *  E  S  L  F  Y  R  E  *  K  Y  L  R  S  S  S  D  *  *  T  L  L  F  P  G  G  K  V  N  C  R  R  R  R  C  R  C  R  C  R  I  P  S  S  T  F  S  S  S  S  T  E  Q  V  K  R  I  R  N  L  *  K  Q  N  F  M  Q  S  N  L  Y  P  S  T  H  T  R  C  C  F  S  W  N  P  D  K  P  Q  I  P  T  P  K  I  L  K  H  K  L  K  T  S  I  I  S  P  G  V  S  T  S  L  K  T  S  L  N  F  G  E  E  K  C  N  K  Q  Q  E  E  T  T  L  P  F  Y  L  P  V  S  V  R  K  S  D  S  H  S  R  Y  I  W  D  G  K  D  L  K  L  V  S  V  D  G  N  A  F  S  I  S  D  F  D  S  N  F  E  D  T  V  H  K  L  V  R  I  C  V  S  A  I  R  N  F  F  L  P  R  E  V  S  R  N  Y  L  E  Y  V  K  W  K  F  V  H  R  V  S  S  S  A  L  Q  V  L  A  T  Q  :  A  M  L  R  A  I  G  I  G  N  S  R  S  L  P  L  A  A  A  L  N  W  V  L  K  D  G  L  G  R  L  C  R  C  I  Y  T  A  S  L  A  S  S  F  D  T  N  L  K  :  R  V  R  F  C  T  S  V  L  F  S  L  S  I  G  V  E  L  L  T  P  V  F  P  Q  Y  F  L  M  L  A  S  I  A  N  I  A  K  Q  I  S  L  A  C  Y  L  A  T  S  :  R   </second_frame>
            <third_frame>   F  P  S  S  F  K  K  V  S  F  I  G  N  R  N  I  Y  V  V  V  V  I  S  E  P  C  Y  F  P  A  E  K  *  I  A  A  A  A  V  A  V  A  V  A  V  F  R  L  Q  L  S  L  H  L  P  Q  N  K  S  R  E  S  E  I  S  K  S  K  I  S  C  N  P  I  C  T  H  Q  P  T  P  V  V  V  S  H  G  T  Q  T  N  P  K  S  P  H  P  K  S  S  N  T  S  S  K  P  L  L  F  P  Q  V  Y  L  L  L  *  R  P  H  *  I  L  G  K  K  S  V  T  S  N  K  K  K  L  L  C  L  F  I  F  Q  F  R  F  A  N  Q  I  V  I  L  G  I  F  G  M  G  K  T  *  S  W  Y  L  L  T  G  M  L  F  R  Y  P  I  S  T  L  I  L  K  I  Q  F  I  S  W  S  E  F  V  F  R  Q  *  E  I  S  F  F  R  G  K  L  V  V  I  T  L  N  T  *  S  G  S  L  F  I  V  F  P  V  L  L  S  K  F  W  R  P  R :   L  C  C  G  Q  L  E  L  G  T  P  V  H  F  H  W  L  L  H  *  I  G  S  *  R  M  V  L  D  G  C  A  G  A  S  T  L  L  A  *  H  L  L  L  I  P  I  L  R :   E  *  G  S  V  H  Q  F  S  S  V  *  A  L  E  L  N  C  *  L  L  Y  S  H  N  T  F  *  C  L  H  Q  L  P  T  L  P  S  K  *  A  L  H  V  T  *  Q  P  V :   E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61783" stop="62277"/>
                    <exon start="62916" stop="63062"/>
                    <exon start="63309" stop="63455"/>
                    <exon start="63716" stop="63718"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KQNFMQSNLYPSTHTRCCFSWNPDKPQIPTPKILKHKLKTSIISPGVSTSLKTSLNFGEEKCNKQQEETTLPFYLPVSVRKSDSHSRYIWDGKDLKLVSVDGNAFSISDFDSNFEDTVHKLVRICVSAIRNFFLPREVSRNYLEYVKWKFVHRVSSSALQVLATQAMLRAIGIGNSRSLPLAAALNWVLKDGLGRLCRCIYTASLASSFDTNLKRVRFCTSVLFSLSIGVELLTPVFPQYFLMLASIANIAKQISLACYLATSR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="64316" PGL_stop="63654"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64316" e_stop="63654"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.908"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="64316" e_stop="63654" e_length="663"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64316" stop="63654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448502" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64082" stop="63665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422513" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGTTATCAGCAATTGCAAAGCTTCTATGAACAGCAGTCTGTGAACATGTCAACAATAAATTCTCAAACAGAAATTCTATCTCAAATTTATCAATGACTGATAAATCCAGAAGACACCTGTACTTATTCATATAGCTAAAAATTTCACATGCGGTTTGGCTATTTAAACGAACTACAATTACTGAAAATAGCCATTTTCCAAATGAACTGACAAAAACATGCAGTTACTCCCTGATGATTTCATATTTGACTTGCATGTTAGAGGAAAAATTCAAGGTATAATTGCATCAATTCTCTTCCAGCTGTTACAGATATGCTAAAAACACTTAAACCCTGAAGACATTGTTTCTCTCAGATCTCTAGGACATGTGAAAGTGAATTGGTCATTAGCGGAAGCAATTAGAAGGCTAGAGTACTCAACTTCAACTAATTTCACTTTCAGAAGGCAATTCAACCAAGTGACAAAATTAAGTGTGTCAGCTTATTATGCCATCGTTAACCTGGGACCTCATAGTAGAAATTCAAAGCCTAATAAGTGCATATATTTATTAGCCTACTATTTTGAATTTGCCAAAGGCACTTCAGATCTTAACAGCCCTCTCTACATAACAAAATTGTGAAGAAATCAATTTATATGCCAAATTGCAGTGGAATTCTTAGAAA</gDNA_template>
            <first_frame> R  L  S  A  I  A  K  L  L  *  T  A  V  C  E  H  V  N  N  K  F  S  N  R  N  S  I  S  N  L  S  M  T  D  K  S  R  R  H  L  Y  L  F  I  *  L  K  I  S  H  A  V  W  L  F  K  R  T  T  I  T  E  N  S  H  F  P  N  E  L  T  K  T  C  S  Y  S  L  M  I  S  Y  L  T  C  M  L  E  E  K  F  K  V  *  L  H  Q  F  S  S  S  C  Y  R  Y  A  K  N  T  *  T  L  K  T  L  F  L  S  D  L  *  D  M  *  K  *  I  G  H  *  R  K  Q  L  E  G  *  S  T  Q  L  Q  L  I  S  L  S  E  G  N  S  T  K  *  Q  N  *  V  C  Q  L  I  M  P  S  L  T  W  D  L  I  V  E  I  Q  S  L  I  S  A  Y  I  Y  *  P  T  I  L  N  L  P  K  A  L  Q  I  L  T  A  L  S  T  *  Q  N  C  E  E  I  N  L  Y  A  K  L  Q  W  N  S  *  K </first_frame>
            <second_frame>  G  Y  Q  Q  L  Q  S  F  Y  E  Q  Q  S  V  N  M  S  T  I  N  S  Q  T  E  I  L  S  Q  I  Y  Q  *  L  I  N  P  E  D  T  C  T  Y  S  Y  S  *  K  F  H  M  R  F  G  Y  L  N  E  L  Q  L  L  K  I  A  I  F  Q  M  N  *  Q  K  H  A  V  T  P  *  *  F  H  I  *  L  A  C  *  R  K  N  S  R  Y  N  C  I  N  S  L  P  A  V  T  D  M  L  K  T  L  K  P  *  R  H  C  F  S  Q  I  S  R  T  C  E  S  E  L  V  I  S  G  S  N  *  K  A  R  V  L  N  F  N  *  F  H  F  Q  K  A  I  Q  P  S  D  K  I  K  C  V  S  L  L  C  H  R  *  P  G  T  S  *  *  K  F  K  A  *  *  V  H  I  F  I  S  L  L  F  *  I  C  Q  R  H  F  R  S  *  Q  P  S  L  H  N  K  I  V  K  K  S  I  Y  M  P  N  C  S  G  I  L  R   </second_frame>
            <third_frame>   V  I  S  N  C  K  A  S  M  N  S  S  L  *  T  C  Q  Q  *  I  L  K  Q  K  F  Y  L  K  F  I  N  D  *  *  I  Q  K  T  P  V  L  I  H  I  A  K  N  F  T  C  G  L  A  I  *  T  N  Y  N  Y  *  K  *  P  F  S  K  *  T  D  K  N  M  Q  L  L  P  D  D  F  I  F  D  L  H  V  R  G  K  I  Q  G  I  I  A  S  I  L  F  Q  L  L  Q  I  C  *  K  H  L  N  P  E  D  I  V  S  L  R  S  L  G  H  V  K  V  N  W  S  L  A  E  A  I  R  R  L  E  Y  S  T  S  T  N  F  T  F  R  R  Q  F  N  Q  V  T  K  L  S  V  S  A  Y  Y  A  I  V  N  L  G  P  H  S  R  N  S  K  P  N  K  C  I  Y  L  L  A  Y  Y  F  E  F  A  K  G  T  S  D  L  N  S  P  L  Y  I  T  K  L  *  R  N  Q  F  I  C  Q  I  A  V  E  F  L  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63996" stop="63697"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHLNPEDIVSLRSLGHVKVNWSLAEAIRRLEYSTSTNFTFRRQFNQVTKLSVSAYYAIVNLGPHSRNSKPNKCIYLLAYYFEFAKGTSDLNSPLYITKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="66914" PGL_stop="67299"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66914" e_stop="67299"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="66914" e_stop="67299" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66914" stop="67299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416037" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTAGAAGCAATTCATAATCTTGTGCAGCCACTTAATGATTCAACACTTGACTGAGATGAGACTGTTGCAGTGTAAACAGTTCAGCAGTTCCTACCCACAAGTATCAATAAAATTGCAATATACCATCAAAAAGTTGTTACAATGTTTTGTTTTGTTTTTTTGGTTTACCCATCAGTGTCCAAAACCAGCTCGCCATTTAACACCTCTACCAGCATATTCTCATTACAGCAAGCAATACAGCATTGACATCACTCGGGCTAAAATCTTCAAAATCATCACCTATCATTTCGTACGTAGCAAGCCAGATGTAGATAGAAGGCGTAATGCTTGACTGGAATTGTTCAGAACAGCTGATGATCTTGACACCTGCATCTTACGTTTCTT</gDNA_template>
            <first_frame> I  *  K  Q  F  I  I  L  C  S  H  L  M  I  Q  H  L  T  E  M  R  L  L  Q  C  K  Q  F  S  S  S  Y  P  Q  V  S  I  K  L  Q  Y  T  I  K  K  L  L  Q  C  F  V  L  F  F  W  F  T  H  Q  C  P  K  P  A  R  H  L  T  P  L  P  A  Y  S  H  Y  S  K  Q  Y  S  I  D  I  T  R  A  K  I  F  K  I  I  T  Y  H  F  V  R  S  K  P  D  V  D  R  R  R  N  A  *  L  E  L  F  R  T  A  D  D  L  D  T  C  I  L  R  F   </first_frame>
            <second_frame>  F  R  S  N  S  *  S  C  A  A  T  *  *  F  N  T  *  L  R  *  D  C  C  S  V  N  S  S  A  V  P  T  H  K  Y  Q  *  N  C  N  I  P  S  K  S  C  Y  N  V  L  F  C  F  F  G  L  P  I  S  V  Q  N  Q  L  A  I  *  H  L  Y  Q  H  I  L  I  T  A  S  N  T  A  L  T  S  L  G  L  K  S  S  K  S  S  P  I  I  S  Y  V  A  S  Q  M  *  I  E  G  V  M  L  D  W  N  C  S  E  Q  L  M  I  L  T  P  A  S  Y  V  S  </second_frame>
            <third_frame>   L  E  A  I  H  N  L  V  Q  P  L  N  D  S  T  L  D  *  D  E  T  V  A  V  *  T  V  Q  Q  F  L  P  T  S  I  N  K  I  A  I  Y  H  Q  K  V  V  T  M  F  C  F  V  F  L  V  Y  P  S  V  S  K  T  S  S  P  F  N  T  S  T  S  I  F  S  L  Q  Q  A  I  Q  H  *  H  H  S  G  *  N  L  Q  N  H  H  L  S  F  R  T  *  Q  A  R  C  R  *  K  A  *  C  L  T  G  I  V  Q  N  S  *  *  S  *  H  L  H  L  T  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66920" stop="67246"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KQFIILCSHLMIQHLTEMRLLQCKQFSSSYPQVSIKLQYTIKKLLQCFVLFFWFTHQCPKPARHLTPLPAYSHYSKQYSIDITRAKIFKIITYHFVRSKPDVDRRRNA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="69353" PGL_stop="66924"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69353" e_stop="69199"/>
            <exon e_start="69105" e_stop="69053"/>
            <exon e_start="67795" e_stop="67619"/>
            <exon e_start="67525" e_stop="67448"/>
            <exon e_start="67366" e_stop="66924"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.881" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="69353" e_stop="69199" e_length="155"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.881">
            <gDNA_intron_boundary i_start="69198" i_stop="69106" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="69105" e_stop="69053" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.979">
            <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67795" e_stop="67619" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.912">
            <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67525" e_stop="67448" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="67366" e_stop="66924" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69353" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69324" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69306" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69306" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69300" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410102" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69299" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69290" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69289" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E597246" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69271" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338468" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69253" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549712" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69252" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231427" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69244" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69209" stop="69199"/>
              <exon start="69105" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E579846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69097" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="66924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67761" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278202" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67732" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="66934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549670" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAAAATTATTTCACAAGTACACTATCCTTTACTTGTGCTCCAAAACCCTAGCCCTAAAACCCTCTGCCAAAGTGAGACACTTTGCTCGAGCGATATGTCGGGAAGAGGAGAAGATAGTGATTCCGATGCGCCGGAAGAACTAACTTCCGTACAG : GGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG : AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA : GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG : GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTGTGGGTAGGAACTGCTGAACTGTTTACACTGCAACAGTCTCATCTCAGTCAAGTGTTGAATCATTAAGTGGCTGCACAAGATTATGAATT</gDNA_template>
            <first_frame> Q  K  L  F  H  K  Y  T  I  L  Y  L  C  S  K  T  L  A  L  K  P  S  A  K  V  R  H  F  A  R  A  I  C  R  E  E  E  K  I  V  I  P  M  R  R  K  N  *  L  P  Y  R :   E  F  K  T  M  R  R  L  E  K  L  K  K  N  T  R  L   : E  L  F  G  K  G  R  N  V  V  D  N  G  L  K  S  *  L  H  D  L  N  K  M  M  K  A  L  K  T  Q  K  N  L  K  M  P  K  S  Q  R  T  I  E  G  C  C  L  M  R  L  *  K  F  L  Q  L  V  K   : R  K  F  S  R  Q  T  R  K  K  N  M  R  S  S  L  H  L  K  T  K  D  P  R  A  L   : G  L  D  Q  L  F  *  R  I  Y  H  L  L  R  A  *  R  A  H  W  H  S  *  R  N  V  R  C  R  C  Q  D  H  Q  L  F  *  T  I  P  V  K  H  Y  A  F  Y  L  H  L  A  C  Y  V  R  N  D  R  *  *  F  *  R  F  *  P  E  *  C  Q  C  C  I  A  C  C  N  E  N  M  L  V  E  V  L  N  G  E  L  V  L  D  T  D  G  *  T  K  K  T  K  Q  N  I  V  T  T  F  *  W  Y  I  A  I  L  L  I  L  V  G  R  N  C  *  T  V  Y  T  A  T  V  S  S  Q  S  S  V  E  S  L  S  G  C  T  R  L  *  I </first_frame>
            <second_frame>  K  N  Y  F  T  S  T  L  S  F  T  C  A  P  K  P  *  P  *  N  P  L  P  K  *  D  T  L  L  E  R  Y  V  G  K  R  R  R  *  *  F  R  C  A  G  R  T  N  F  R  T   : G  N  S  K  Q  *  G  D  *  K  S  *  K  R  T  Q  G  *  :  S  C  S  G  K  E  G  T  S  *  T  M  G  S  K  V  N  S  T  T  *  T  K  *  *  K  H  *  R  H  K  R  T  *  R  C  P  R  V  K  G  Q  *  R  D  A  A  *  *  D  C  K  N  S  C  S  S  *  K  :  E  S  F  L  V  R  L  G  R  R  T  *  E  A  A  Y  I  *  K  Q  K  I  Q  E  L  W  :  V  W  T  S  Y  F  E  G  S  T  T  S  S  V  L  R  E  L  T  G  I  L  E  E  T  *  D  A  G  V  K  I  I  S  C  S  E  Q  F  Q  S  S  I  T  P  S  I  Y  I  W  L  A  T  Y  E  M  I  G  D  D  F  E  D  F  S  P  S  D  V  N  A  V  L  L  A  V  M  R  I  C  W  *  R  C  *  M  A  S  W  F  W  T  L  M  G  K  P  K  K  Q  N  K  T  L  *  Q  L  F  D  G  I  L  Q  F  Y  *  Y  L  W  V  G  T  A  E  L  F  T  L  Q  Q  S  H  L  S  Q  V  L  N  H  *  V  A  A  Q  D  Y  E   </second_frame>
            <third_frame>   K  I  I  S  Q  V  H  Y  P  L  L  V  L  Q  N  P  S  P  K  T  L  C  Q  S  E  T  L  C  S  S  D  M  S  G  R  G  E  D  S  D  S  D  A  P  E  E  L  T  S  V  Q  :  G  I  Q  N  N  E  E  I  R  K  V  E  K  E  H  K  A  R :   V  V  R  E  R  K  E  R  R  R  Q  W  A  Q  K  L  T  P  R  P  K  Q  N  D  E  S  I  E  D  T  K  E  P  E  D  A  Q  E  S  K  D  N  R  G  M  L  P  D  E  I  V  K  I  L  A  A  R  E  K :   K  V  F  S  S  D  S  E  E  E  H  E  K  Q  P  T  S  K  N  K  R  S  K  S  S  G :   S  G  P  V  I  L  K  D  L  P  P  P  P  C  L  E  S  S  L  A  F  L  K  K  R  K  M  Q  V  S  R  S  S  A  V  L  N  N  S  S  Q  A  L  R  L  L  S  T  S  G  L  L  R  T  K  *  *  V  M  I  L  K  I  L  A  R  V  M  S  M  L  Y  C  L  L  *  *  E  Y  A  G  R  G  V  K  W  R  A  G  F  G  H  *  W  V  N  Q  K  N  K  T  K  H  C  N  N  F  L  M  V  Y  C  N  F  I  D  T  C  G  *  E  L  L  N  C  L  H  C  N  S  L  I  S  V  K  C  *  I  I  K  W  L  H  K  I  M  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69351" stop="69199"/>
                    <exon start="69105" stop="69053"/>
                    <exon start="67795" stop="67619"/>
                    <exon start="67525" stop="67448"/>
                    <exon start="67366" stop="67198"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>627</number_coding_nucleotides>
                  <number_encoded_amino_acids>209</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIISQVHYPLLVLQNPSPKTLCQSETLCSSDMSGRGEDSDSDAPEELTSVQGIQNNEEIRKVEKEHKARVVRERKERRRQWAQKLTPRPKQNDESIEDTKEPEDAQESKDNRGMLPDEIVKILAAREKKVFSSDSEEEHEKQPTSKNKRSKSSGSGPVILKDLPPPPCLESSLAFLKKRKMQVSRSSAVLNNSSQALRLLSTSGLLRTK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="69110" e_stop="69053"/>
            <exon e_start="67795" e_stop="67619"/>
            <exon e_start="67525" e_stop="67448"/>
            <exon e_start="67366" e_stop="66924"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.979" e_score="0.914"/>
          <exon-intron don_prob="1.000" acc_prob="0.912" e_score="0.977"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="69110" e_stop="69053" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.979">
            <gDNA_intron_boundary i_start="69052" i_stop="67796" i_length="1257"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="67795" e_stop="67619" e_length="177"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.912">
            <gDNA_intron_boundary i_start="67618" i_stop="67526" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67525" e_stop="67448" e_length="78"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="67447" i_stop="67367" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="67366" e_stop="66924" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69110" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="66928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558925" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69097" stop="69053"/>
              <exon start="67795" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="66924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463572" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67761" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="67018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278202" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67732" stop="67619"/>
              <exon start="67525" stop="67448"/>
              <exon start="67366" stop="66934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549670" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCAGGGAATTCAAAACAATGAGGAGATTAGAAAAGTTGAAAAAGAACACAAGGCTAG : AGTTGTTCGGGAAAGGAAGGAACGTCGTAGACAATGGGCTCAAAAGTTAACTCCACGACCTAAACAAAATGATGAAAGCATTGAAGACACAAAAGAACCTGAAGATGCCCAAGAGTCAAAGGACAATAGAGGGATGCTGCCTGATGAGATTGTAAAAATTCTTGCAGCTCGTGAAAA : GAAAGTTTTCTCGTCAGACTCGGAAGAAGAACATGAGAAGCAGCCTACATCTAAAAACAAAAGATCCAAGAGCTCTGG : GTCTGGACCAGTTATTTTGAAGGATCTACCACCTCCTCCGTGCTTAGAGAGCTCACTGGCATTCTTGAAGAAACGTAAGATGCAGGTGTCAAGATCATCAGCTGTTCTGAACAATTCCAGTCAAGCATTACGCCTTCTATCTACATCTGGCTTGCTACGTACGAAATGATAGGTGATGATTTTGAAGATTTTAGCCCGAGTGATGTCAATGCTGTATTGCTTGCTGTAATGAGAATATGCTGGTAGAGGTGTTAAATGGCGAGCTGGTTTTGGACACTGATGGGTAAACCAAAAAAACAAAACAAAACATTGTAACAACTTTTTGATGGTATATTGCAATTTTATTGATACTTGTGGGTAGGAACTGCTGAACTGTTTACACTGCAACAGTCTCATCTCAGTCAAGTGTTGAATCATTAAGTGGCTGCACAAGATTATGAATT</gDNA_template>
            <first_frame> C  R  E  F  K  T  M  R  R  L  E  K  L  K  K  N  T  R  L   : E  L  F  G  K  G  R  N  V  V  D  N  G  L  K  S  *  L  H  D  L  N  K  M  M  K  A  L  K  T  Q  K  N  L  K  M  P  K  S  Q  R  T  I  E  G  C  C  L  M  R  L  *  K  F  L  Q  L  V  K   : R  K  F  S  R  Q  T  R  K  K  N  M  R  S  S  L  H  L  K  T  K  D  P  R  A  L   : G  L  D  Q  L  F  *  R  I  Y  H  L  L  R  A  *  R  A  H  W  H  S  *  R  N  V  R  C  R  C  Q  D  H  Q  L  F  *  T  I  P  V  K  H  Y  A  F  Y  L  H  L  A  C  Y  V  R  N  D  R  *  *  F  *  R  F  *  P  E  *  C  Q  C  C  I  A  C  C  N  E  N  M  L  V  E  V  L  N  G  E  L  V  L  D  T  D  G  *  T  K  K  T  K  Q  N  I  V  T  T  F  *  W  Y  I  A  I  L  L  I  L  V  G  R  N  C  *  T  V  Y  T  A  T  V  S  S  Q  S  S  V  E  S  L  S  G  C  T  R  L  *  I </first_frame>
            <second_frame>  A  G  N  S  K  Q  *  G  D  *  K  S  *  K  R  T  Q  G  *  :  S  C  S  G  K  E  G  T  S  *  T  M  G  S  K  V  N  S  T  T  *  T  K  *  *  K  H  *  R  H  K  R  T  *  R  C  P  R  V  K  G  Q  *  R  D  A  A  *  *  D  C  K  N  S  C  S  S  *  K  :  E  S  F  L  V  R  L  G  R  R  T  *  E  A  A  Y  I  *  K  Q  K  I  Q  E  L  W  :  V  W  T  S  Y  F  E  G  S  T  T  S  S  V  L  R  E  L  T  G  I  L  E  E  T  *  D  A  G  V  K  I  I  S  C  S  E  Q  F  Q  S  S  I  T  P  S  I  Y  I  W  L  A  T  Y  E  M  I  G  D  D  F  E  D  F  S  P  S  D  V  N  A  V  L  L  A  V  M  R  I  C  W  *  R  C  *  M  A  S  W  F  W  T  L  M  G  K  P  K  K  Q  N  K  T  L  *  Q  L  F  D  G  I  L  Q  F  Y  *  Y  L  W  V  G  T  A  E  L  F  T  L  Q  Q  S  H  L  S  Q  V  L  N  H  *  V  A  A  Q  D  Y  E   </second_frame>
            <third_frame>   Q  G  I  Q  N  N  E  E  I  R  K  V  E  K  E  H  K  A  R :   V  V  R  E  R  K  E  R  R  R  Q  W  A  Q  K  L  T  P  R  P  K  Q  N  D  E  S  I  E  D  T  K  E  P  E  D  A  Q  E  S  K  D  N  R  G  M  L  P  D  E  I  V  K  I  L  A  A  R  E  K :   K  V  F  S  S  D  S  E  E  E  H  E  K  Q  P  T  S  K  N  K  R  S  K  S  S  G :   S  G  P  V  I  L  K  D  L  P  P  P  P  C  L  E  S  S  L  A  F  L  K  K  R  K  M  Q  V  S  R  S  S  A  V  L  N  N  S  S  Q  A  L  R  L  L  S  T  S  G  L  L  R  T  K  *  *  V  M  I  L  K  I  L  A  R  V  M  S  M  L  Y  C  L  L  *  *  E  Y  A  G  R  G  V  K  W  R  A  G  F  G  H  *  W  V  N  Q  K  N  K  T  K  H  C  N  N  F  L  M  V  Y  C  N  F  I  D  T  C  G  *  E  L  L  N  C  L  H  C  N  S  L  I  S  V  K  C  *  I  I  K  W  L  H  K  I  M  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69108" stop="69053"/>
                    <exon start="67795" stop="67619"/>
                    <exon start="67525" stop="67448"/>
                    <exon start="67366" stop="67198"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGIQNNEEIRKVEKEHKARVVRERKERRRQWAQKLTPRPKQNDESIEDTKEPEDAQESKDNRGMLPDEIVKILAAREKKVFSSDSEEEHEKQPTSKNKRSKSSGSGPVILKDLPPPPCLESSLAFLKKRKMQVSRSSAVLNNSSQALRLLSTSGLLRTK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="75891" PGL_stop="70273"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75891" e_stop="75621"/>
            <exon e_start="72066" e_stop="71959"/>
            <exon e_start="71824" e_stop="71754"/>
            <exon e_start="70739" e_stop="70273"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.739" e_score="0.992"/>
          <exon-intron don_prob="0.998" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.853" e_score="1.000"/>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="75891" e_stop="75621" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.739">
            <gDNA_intron_boundary i_start="75620" i_stop="72067" i_length="3554"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72066" e_stop="71959" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.945">
            <gDNA_intron_boundary i_start="71958" i_stop="71825" i_length="134"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71824" e_stop="71754" e_length="71"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.853">
            <gDNA_intron_boundary i_start="71753" i_stop="70740" i_length="1014"/>
          </intron>
          <exon e_serial="4" e_score="0.924">
            <gDNA_exon_boundary e_start="70739" e_stop="70273" e_length="467"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75891" stop="75621"/>
              <exon start="72066" stop="71959"/>
              <exon start="71824" stop="71754"/>
              <exon start="70739" stop="70671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75862" stop="75621"/>
              <exon start="72066" stop="71959"/>
              <exon start="71824" stop="71754"/>
              <exon start="70739" stop="70508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72021" stop="71959"/>
              <exon start="71824" stop="71754"/>
              <exon start="70739" stop="70278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573440" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71981" stop="71959"/>
              <exon start="71824" stop="71754"/>
              <exon start="70739" stop="70278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574477" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71970" stop="71959"/>
              <exon start="71824" stop="71754"/>
              <exon start="70739" stop="70278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581440" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71803" stop="71754"/>
              <exon start="70739" stop="70278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70624" stop="70273"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70624" stop="70273"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227262" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAAGCAAATACTCGACAGACTGTTGTAGAGTGCAGAATCATTCGGAATTTGTTCAATAACTTTTCAGATCTAGTAGTAGGGGTTGAAAGAAAAATGGGTAGGATGGATTATTTGGCTATGAAGACTGATGAAGATACTAACAAATTGATTAATGAAGATCTGAATGAGCTAAAGTTAGCTGCTGAGAAGCTCTTTGACCATGCCACTAAACTTGGCGGTCTTGGATTTGGTACTTCTCTTCTCAAATGGTTTGCCTCATTTGCTGCCAT : TTATTTGCTGATACTGGACCGGACAAACTGGAAAACAAATATGTTGACTGGACTTCTAGTCCCATATATCTTCTTCAGTTTCCCTGCAGTGTTATTCCACTTCTTCAG : AGGAGAGGTTGGGAAATGGATTGCTTTCGTTGCAGTAGTACTTAGGCTTTTCTTCCCACGACATTTTCCAG : ACTGGTTGGAAATGCCTGGTTCATTAATCCTACTCCTAGTGGTTTCGCCCAACATCTTTGCCCACACTTTCAGAGACAGCTGGATTGGCACTGCGATATGTCTTTTGATTGGCTGCTATCTCCTCCAAGAGCACATCAGAGCCTCCGGTGGATTCAGAAATTCCTTAACACAAAGCAATGGTATATCTAACACAGTTGGTATAATTCTTCTGTTGGTATATCCAATCTGGGCTCTGGTTCTTCGAGCCGTCTGATGAACTATAGCTACAACGATCATATGTGTGTTTTCGTCCACGAATTCAATGCTCAATGCTGCAAAGCAGACCTCTGAATAAATGGATTTGGTTTTGTTTTAAACATTTCTGGTTATGTGATTATGTACTTTTGACATATGAAGTACTTATGGTTGATGGATTTGATTGTAAAGTTTTCACTCATTCACGCTTGCAATCTATGAACTTGGTAAG</gDNA_template>
            <first_frame> K  K  Q  I  L  D  R  L  L  *  S  A  E  S  F  G  I  C  S  I  T  F  Q  I  *  *  *  G  L  K  E  K  W  V  G  W  I  I  W  L  *  R  L  M  K  I  L  T  N  *  L  M  K  I  *  M  S  *  S  *  L  L  R  S  S  L  T  M  P  L  N  L  A  V  L  D  L  V  L  L  F  S  N  G  L  P  H  L  L  P   : F  I  C  *  Y  W  T  G  Q  T  G  K  Q  I  C  *  L  D  F  *  S  H  I  S  S  S  V  S  L  Q  C  Y  S  T  S  S   : E  E  R  L  G  N  G  L  L  S  L  Q  *  Y  L  G  F  S  S  H  D  I  F  Q  :  T  G  W  K  C  L  V  H  *  S  Y  S  *  W  F  R  P  T  S  L  P  T  L  S  E  T  A  G  L  A  L  R  Y  V  F  *  L  A  A  I  S  S  K  S  T  S  E  P  P  V  D  S  E  I  P  *  H  K  A  M  V  Y  L  T  Q  L  V  *  F  F  C  W  Y  I  Q  S  G  L  W  F  F  E  P  S  D  E  L  *  L  Q  R  S  Y  V  C  F  R  P  R  I  Q  C  S  M  L  Q  S  R  P  L  N  K  W  I  W  F  C  F  K  H  F  W  L  C  D  Y  V  L  L  T  Y  E  V  L  M  V  D  G  F  D  C  K  V  F  T  H  S  R  L  Q  S  M  N  L  V   </first_frame>
            <second_frame>  K  S  K  Y  S  T  D  C  C  R  V  Q  N  H  S  E  F  V  Q  *  L  F  R  S  S  S  R  G  *  K  K  N  G  *  D  G  L  F  G  Y  E  D  *  *  R  Y  *  Q  I  D  *  *  R  S  E  *  A  K  V  S  C  *  E  A  L  *  P  C  H  *  T  W  R  S  W  I  W  Y  F  S  S  Q  M  V  C  L  I  C  C  H  :  L  F  A  D  T  G  P  D  K  L  E  N  K  Y  V  D  W  T  S  S  P  I  Y  L  L  Q  F  P  C  S  V  I  P  L  L  Q  :  R  R  G  W  E  M  D  C  F  R  C  S  S  T  *  A  F  L  P  T  T  F  S  R :   L  V  G  N  A  W  F  I  N  P  T  P  S  G  F  A  Q  H  L  C  P  H  F  Q  R  Q  L  D  W  H  C  D  M  S  F  D  W  L  L  S  P  P  R  A  H  Q  S  L  R  W  I  Q  K  F  L  N  T  K  Q  W  Y  I  *  H  S  W  Y  N  S  S  V  G  I  S  N  L  G  S  G  S  S  S  R  L  M  N  Y  S  Y  N  D  H  M  C  V  F  V  H  E  F  N  A  Q  C  C  K  A  D  L  *  I  N  G  F  G  F  V  L  N  I  S  G  Y  V  I  M  Y  F  *  H  M  K  Y  L  W  L  M  D  L  I  V  K  F  S  L  I  H  A  C  N  L  *  T  W  *  </second_frame>
            <third_frame>   K  A  N  T  R  Q  T  V  V  E  C  R  I  I  R  N  L  F  N  N  F  S  D  L  V  V  G  V  E  R  K  M  G  R  M  D  Y  L  A  M  K  T  D  E  D  T  N  K  L  I  N  E  D  L  N  E  L  K  L  A  A  E  K  L  F  D  H  A  T  K  L  G  G  L  G  F  G  T  S  L  L  K  W  F  A  S  F  A  A  I :   Y  L  L  I  L  D  R  T  N  W  K  T  N  M  L  T  G  L  L  V  P  Y  I  F  F  S  F  P  A  V  L  F  H  F  F  R :   G  E  V  G  K  W  I  A  F  V  A  V  V  L  R  L  F  F  P  R  H  F  P   : D  W  L  E  M  P  G  S  L  I  L  L  L  V  V  S  P  N  I  F  A  H  T  F  R  D  S  W  I  G  T  A  I  C  L  L  I  G  C  Y  L  L  Q  E  H  I  R  A  S  G  G  F  R  N  S  L  T  Q  S  N  G  I  S  N  T  V  G  I  I  L  L  L  V  Y  P  I  W  A  L  V  L  R  A  V  *  *  T  I  A  T  T  I  I  C  V  F  S  S  T  N  S  M  L  N  A  A  K  Q  T  S  E  *  M  D  L  V  L  F  *  T  F  L  V  M  *  L  C  T  F  D  I  *  S  T  Y  G  *  W  I  *  L  *  S  F  H  S  F  T  L  A  I  Y  E  L  G  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75889" stop="75621"/>
                    <exon start="72066" stop="71959"/>
                    <exon start="71824" stop="71754"/>
                    <exon start="70739" stop="70486"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KANTRQTVVECRIIRNLFNNFSDLVVGVERKMGRMDYLAMKTDEDTNKLINEDLNELKLAAEKLFDHATKLGGLGFGTSLLKWFASFAAIYLLILDRTNWKTNMLTGLLVPYIFFSFPAVLFHFFRGEVGKWIAFVAVVLRLFFPRHFPDWLEMPGSLILLLVVSPNIFAHTFRDSWIGTAICLLIGCYLLQEHIRASGGFRNSLTQSNGISNTVGIILLLVYPIWALVLRAV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70475" stop="70275"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQRSYVCFRPRIQCSMLQSRPLNKWIWFCFKHFWLCDYVLLTYEVLMVDGFDCKVFTHSRLQSMNLV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="81272" PGL_stop="83836"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81272" e_stop="81664"/>
            <exon e_start="82660" e_stop="83588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81272" e_stop="81664" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="83588" e_length="929"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81272" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329245" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81664"/>
              <exon start="82660" stop="82936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81303" stop="81664"/>
              <exon start="82660" stop="82893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81304" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81312" stop="81664"/>
              <exon start="82660" stop="82875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81326" stop="81664"/>
              <exon start="82660" stop="83027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81326" stop="81664"/>
              <exon start="82660" stop="82960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81332" stop="81664"/>
              <exon start="82660" stop="82915"/>
            </gDNA_exon_coordinates>
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              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303816" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81393" stop="81664"/>
              <exon start="82660" stop="83172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81396" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81398" stop="81664"/>
              <exon start="82660" stop="82927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81399" stop="81664"/>
              <exon start="82660" stop="82939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81400" stop="81664"/>
              <exon start="82660" stop="83086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81401" stop="81664"/>
              <exon start="82660" stop="82932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81402" stop="81664"/>
              <exon start="82660" stop="82822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81402" stop="81664"/>
              <exon start="82660" stop="82740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467055" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81404" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81404" stop="81664"/>
              <exon start="82660" stop="82847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81406" stop="81664"/>
              <exon start="82660" stop="82851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81412" stop="81664"/>
              <exon start="82660" stop="82962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81413" stop="81664"/>
              <exon start="82660" stop="82787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81414" stop="81664"/>
              <exon start="82660" stop="83085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348838" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="83088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="82829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="82739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280596" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81417" stop="81664"/>
              <exon start="82660" stop="83009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81427" stop="81664"/>
              <exon start="82660" stop="82936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81446" stop="81664"/>
              <exon start="82660" stop="82965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81449" stop="81664"/>
              <exon start="82660" stop="83078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81449" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81466" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81493" stop="81664"/>
              <exon start="82660" stop="83008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81508" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81509" stop="81664"/>
              <exon start="82660" stop="83079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81509" stop="81664"/>
              <exon start="82660" stop="83020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81514" stop="81664"/>
              <exon start="82660" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81559" stop="81664"/>
              <exon start="82660" stop="83008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81574" stop="81664"/>
              <exon start="82660" stop="83079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81579" stop="81664"/>
              <exon start="82660" stop="83063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81622" stop="81664"/>
              <exon start="82660" stop="83179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82674" stop="83285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82687" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82701" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82707" stop="82925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82746" stop="83483"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82814" stop="83565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82873" stop="83208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578153" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403864" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433645" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82932" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82935" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371509" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82965" stop="83387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82993" stop="83414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83015" stop="83581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83018" stop="83447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83035" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616481" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83053" stop="83588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83068" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203369" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83091" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83101" stop="83504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83137" stop="83583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83174" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83181" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83188" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234642" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83220" stop="83574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228886" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83223" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238629" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83226" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83286" stop="83570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220521" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83301" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83343" stop="83567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATCTCTTATCTTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCT</gDNA_template>
            <first_frame> L  S  L  I  L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T  Y  D  E  I  Q  S  K  T  Y  M  E  V  K  G  T  G  T  A  N  Q  C  P  T  I  E  G  G  V  G  S  F  A  F  K  P  G  K  Y  T  A  K  K  F  C  L  E  P  T  S  F  T  V  K  A  E  G  V  S  K  N  S  A  P  D  F  Q  K  T  K  L  M  T  R  L  T  Y  T  L  D  E  I  E  G  P  F  E  V  S  P  D  G  T  V  K  F  E  E  K  D  G  I  D  Y  A  A  V  T  V  Q  L  P  G  G  E  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  E  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  V  Y  Y  Q  A  Q  V  I  F  H  A  G  S  Q  L  *  T  L  L  M   </first_frame>
            <second_frame>  Y  L  L  S  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E  F  Q  N  V  *  P  M  M  K  S  K  V  R  H  I  W  K  *  R  E  L  E  L  L  T  N  V  L  P  L  K  E  V  L  A  A  L  P  S  N  Q  A  N  T  L  P  R  N  S  A  *  S  P  H  H  S  Q  S  R  Q  R  V  S  A  R  T  Q  P  Q  T  S  K  K  P  S  S  *  H  A  *  P  T  L  L  M  R  L  R  D  H  L  K  C  L  R  M  A  L  L  S  L  R  R  R  M  E  L  I  M  L  L  L  Q  F  S  F  L  V  V  S  V  C  P  S  S  S  L  S  N  S  L  W  Q  A  A  S  Q  K  A  L  V  V  S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L  Y  I  I  K  L  K  *  Y  F  M  L  V  A  S  Y  K  H  F  *  C  </second_frame>
            <third_frame>   I  S  Y  L  T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R  S  S  K  T  F  N  L  *  *  N  P  K  *  D  I  Y  G  S  K  G  N  W  N  C  *  P  M  S  Y  H  *  R  R  C  W  Q  L  C  L  Q  T  R  Q  I  H  C  Q  E  I  L  P  R  A  H  I  I  H  S  Q  G  R  G  C  Q  Q  E  L  S  P  R  L  P  K  N  Q  A  H  D  T  L  N  L  H  S  *  *  D  *  G  T  I  *  S  V  S  G  W  H  C  *  V  *  G  E  G  W  N  *  L  C  C  C  Y  S  S  A  S  W  W  *  A  C  A  L  P  L  H  Y  Q  T  A  C  G  K  R  Q  A  R  K  L  *  W  *  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C  C  I  L  S  S  S  S  N  I  S  C  W  *  P  V  I  N  T  S  N  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81311" stop="81664"/>
                    <exon start="82660" stop="83415"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVYSLHSPYKPFLTATHPLSNKAETERNTRHLINKKRGKIMAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="81272" e_stop="81664"/>
            <exon e_start="82660" e_stop="83570"/>
            <exon e_start="83810" e_stop="83836"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.938" e_score="1.000"/>
          <exon-only e_score="0.519"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81272" e_stop="81664" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="83570" e_length="911"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.938">
            <gDNA_intron_boundary i_start="83571" i_stop="83809" i_length="239"/>
          </intron>
          <exon e_serial="3" e_score="0.519">
            <gDNA_exon_boundary e_start="83810" e_stop="83836" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81272" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329245" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81664"/>
              <exon start="82660" stop="82936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81303" stop="81664"/>
              <exon start="82660" stop="82893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81304" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81312" stop="81664"/>
              <exon start="82660" stop="82875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81326" stop="81664"/>
              <exon start="82660" stop="83027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81326" stop="81664"/>
              <exon start="82660" stop="82960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317039" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81332" stop="81664"/>
              <exon start="82660" stop="82915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81332" stop="81664"/>
              <exon start="82660" stop="82775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296147" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81335" stop="81664"/>
              <exon start="82660" stop="83076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332005" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81335" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81339" stop="81664"/>
              <exon start="82660" stop="82892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81342" stop="81664"/>
              <exon start="82660" stop="82937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342145" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81343" stop="81664"/>
              <exon start="82660" stop="83097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81343" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81343" stop="81664"/>
              <exon start="82660" stop="82931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81352" stop="81664"/>
              <exon start="82660" stop="83070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81352" stop="81664"/>
              <exon start="82660" stop="82877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81352" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325801" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81353" stop="81664"/>
              <exon start="82660" stop="82965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347578" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81353" stop="81664"/>
              <exon start="82660" stop="82965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297758" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81353" stop="81664"/>
              <exon start="82660" stop="82852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81353" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81354" stop="81664"/>
              <exon start="82660" stop="83042"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344522" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81356" stop="81664"/>
              <exon start="82660" stop="82785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202916" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81360" stop="81664"/>
              <exon start="82660" stop="83010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333896" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81360" stop="81664"/>
              <exon start="82660" stop="82970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81361" stop="81664"/>
              <exon start="82660" stop="82767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81362" stop="81614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81363" stop="81664"/>
              <exon start="82660" stop="83070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81363" stop="81664"/>
              <exon start="82660" stop="83027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327072" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81363" stop="81664"/>
              <exon start="82660" stop="83010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81363" stop="81664"/>
              <exon start="82660" stop="83010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81363" stop="81664"/>
              <exon start="82660" stop="82961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81363" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283365" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81364" stop="81664"/>
              <exon start="82660" stop="83085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348293" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81365" stop="81664"/>
              <exon start="82660" stop="83200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81366" stop="81664"/>
              <exon start="82660" stop="82765"/>
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              <exon start="82660" stop="83009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81427" stop="81664"/>
              <exon start="82660" stop="82936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81446" stop="81664"/>
              <exon start="82660" stop="82965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81449" stop="81664"/>
              <exon start="82660" stop="83078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81449" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81466" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81493" stop="81664"/>
              <exon start="82660" stop="83008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81508" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81509" stop="81664"/>
              <exon start="82660" stop="83079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81509" stop="81664"/>
              <exon start="82660" stop="83020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81514" stop="81664"/>
              <exon start="82660" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81559" stop="81664"/>
              <exon start="82660" stop="83008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81574" stop="81664"/>
              <exon start="82660" stop="83079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81579" stop="81664"/>
              <exon start="82660" stop="83063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81622" stop="81664"/>
              <exon start="82660" stop="83179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82674" stop="83285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82687" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82701" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82707" stop="82925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82746" stop="83483"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82814" stop="83565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82873" stop="83208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403864" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433645" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82932" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82935" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371509" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82965" stop="83387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82993" stop="83414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83018" stop="83447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83035" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616481" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83068" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203369" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83101" stop="83504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83174" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83181" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83226" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83286" stop="83570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220521" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83301" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83314" stop="83570"/>
              <exon start="83810" stop="83836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232189" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83343" stop="83567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATCTCTTATCTTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTT : ATCATGCAAGGGTAAAGCAGATGAAAT</gDNA_template>
            <first_frame> L  S  L  I  L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T  Y  D  E  I  Q  S  K  T  Y  M  E  V  K  G  T  G  T  A  N  Q  C  P  T  I  E  G  G  V  G  S  F  A  F  K  P  G  K  Y  T  A  K  K  F  C  L  E  P  T  S  F  T  V  K  A  E  G  V  S  K  N  S  A  P  D  F  Q  K  T  K  L  M  T  R  L  T  Y  T  L  D  E  I  E  G  P  F  E  V  S  P  D  G  T  V  K  F  E  E  K  D  G  I  D  Y  A  A  V  T  V  Q  L  P  G  G  E  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  E  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  V  Y  Y  Q  A  Q  V  I  F  H  A  G  S  Q  L :   S  C  K  G  K  A  D  E   </first_frame>
            <second_frame>  Y  L  L  S  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E  F  Q  N  V  *  P  M  M  K  S  K  V  R  H  I  W  K  *  R  E  L  E  L  L  T  N  V  L  P  L  K  E  V  L  A  A  L  P  S  N  Q  A  N  T  L  P  R  N  S  A  *  S  P  H  H  S  Q  S  R  Q  R  V  S  A  R  T  Q  P  Q  T  S  K  K  P  S  S  *  H  A  *  P  T  L  L  M  R  L  R  D  H  L  K  C  L  R  M  A  L  L  S  L  R  R  R  M  E  L  I  M  L  L  L  Q  F  S  F  L  V  V  S  V  C  P  S  S  S  L  S  N  S  L  W  Q  A  A  S  Q  K  A  L  V  V  S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L  Y  I  I  K  L  K  *  Y  F  M  L  V  A  S   : Y  H  A  R  V  K  Q  M  K  </second_frame>
            <third_frame>   I  S  Y  L  T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R  S  S  K  T  F  N  L  *  *  N  P  K  *  D  I  Y  G  S  K  G  N  W  N  C  *  P  M  S  Y  H  *  R  R  C  W  Q  L  C  L  Q  T  R  Q  I  H  C  Q  E  I  L  P  R  A  H  I  I  H  S  Q  G  R  G  C  Q  Q  E  L  S  P  R  L  P  K  N  Q  A  H  D  T  L  N  L  H  S  *  *  D  *  G  T  I  *  S  V  S  G  W  H  C  *  V  *  G  E  G  W  N  *  L  C  C  C  Y  S  S  A  S  W  W  *  A  C  A  L  P  L  H  Y  Q  T  A  C  G  K  R  Q  A  R  K  L  *  W  *  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C  C  I  L  S  S  S  S  N  I  S  C  W  *  P  V  :  I  M  Q  G  *  S  R  *  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81311" stop="81664"/>
                    <exon start="82660" stop="83415"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVYSLHSPYKPFLTATHPLSNKAETERNTRHLINKKRGKIMAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="81272" e_stop="81664"/>
            <exon e_start="82660" e_stop="83526"/>
            <exon e_start="83602" e_stop="83614"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.338" acc_prob="0.707" e_score="1.000"/>
          <exon-only e_score="0.692"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81272" e_stop="81664" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="83526" e_length="867"/>
          </exon>
          <intron i_serial="2" don_prob="0.338" acc_prob="0.707">
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            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="83120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332705" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="83006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284495" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303816" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81393" stop="81664"/>
              <exon start="82660" stop="83172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81396" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81398" stop="81664"/>
              <exon start="82660" stop="82927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81399" stop="81664"/>
              <exon start="82660" stop="82939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81400" stop="81664"/>
              <exon start="82660" stop="83086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81401" stop="81664"/>
              <exon start="82660" stop="82932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81402" stop="81664"/>
              <exon start="82660" stop="82822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81402" stop="81664"/>
              <exon start="82660" stop="82740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467055" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81404" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81404" stop="81664"/>
              <exon start="82660" stop="82847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81406" stop="81664"/>
              <exon start="82660" stop="82851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81412" stop="81664"/>
              <exon start="82660" stop="82962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81413" stop="81664"/>
              <exon start="82660" stop="82787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81414" stop="81664"/>
              <exon start="82660" stop="83085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348838" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="83088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="82829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="82739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280596" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81417" stop="81664"/>
              <exon start="82660" stop="83009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81427" stop="81664"/>
              <exon start="82660" stop="82936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313070" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81446" stop="81664"/>
              <exon start="82660" stop="82965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E466599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81449" stop="81664"/>
              <exon start="82660" stop="83078"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81449" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81466" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81493" stop="81664"/>
              <exon start="82660" stop="83008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81508" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81509" stop="81664"/>
              <exon start="82660" stop="83079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81509" stop="81664"/>
              <exon start="82660" stop="83020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81514" stop="81664"/>
              <exon start="82660" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345499" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81559" stop="81664"/>
              <exon start="82660" stop="83008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293736" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81574" stop="81664"/>
              <exon start="82660" stop="83079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81579" stop="81664"/>
              <exon start="82660" stop="83063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476017" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81622" stop="81664"/>
              <exon start="82660" stop="83179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82674" stop="83285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82687" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82701" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82707" stop="82925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82746" stop="83483"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82873" stop="83208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82965" stop="83387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82993" stop="83414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83018" stop="83447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83035" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616481" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83068" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203369" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83101" stop="83504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83289" stop="83526"/>
              <exon start="83602" stop="83614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339947" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATCTCTTATCTTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCT : GATAAAGTAAAAA</gDNA_template>
            <first_frame> L  S  L  I  L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T  Y  D  E  I  Q  S  K  T  Y  M  E  V  K  G  T  G  T  A  N  Q  C  P  T  I  E  G  G  V  G  S  F  A  F  K  P  G  K  Y  T  A  K  K  F  C  L  E  P  T  S  F  T  V  K  A  E  G  V  S  K  N  S  A  P  D  F  Q  K  T  K  L  M  T  R  L  T  Y  T  L  D  E  I  E  G  P  F  E  V  S  P  D  G  T  V  K  F  E  E  K  D  G  I  D  Y  A  A  V  T  V  Q  L  P  G  G  E  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  E  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  :  D  K  V  K  </first_frame>
            <second_frame>  Y  L  L  S  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E  F  Q  N  V  *  P  M  M  K  S  K  V  R  H  I  W  K  *  R  E  L  E  L  L  T  N  V  L  P  L  K  E  V  L  A  A  L  P  S  N  Q  A  N  T  L  P  R  N  S  A  *  S  P  H  H  S  Q  S  R  Q  R  V  S  A  R  T  Q  P  Q  T  S  K  K  P  S  S  *  H  A  *  P  T  L  L  M  R  L  R  D  H  L  K  C  L  R  M  A  L  L  S  L  R  R  R  M  E  L  I  M  L  L  L  Q  F  S  F  L  V  V  S  V  C  P  S  S  S  L  S  N  S  L  W  Q  A  A  S  Q  K  A  L  V  V  S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L :   I  K  *  K </second_frame>
            <third_frame>   I  S  Y  L  T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R  S  S  K  T  F  N  L  *  *  N  P  K  *  D  I  Y  G  S  K  G  N  W  N  C  *  P  M  S  Y  H  *  R  R  C  W  Q  L  C  L  Q  T  R  Q  I  H  C  Q  E  I  L  P  R  A  H  I  I  H  S  Q  G  R  G  C  Q  Q  E  L  S  P  R  L  P  K  N  Q  A  H  D  T  L  N  L  H  S  *  *  D  *  G  T  I  *  S  V  S  G  W  H  C  *  V  *  G  E  G  W  N  *  L  C  C  C  Y  S  S  A  S  W  W  *  A  C  A  L  P  L  H  Y  Q  T  A  C  G  K  R  Q  A  R  K  L  *  W  *  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C   : *  *  S  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81311" stop="81664"/>
                    <exon start="82660" stop="83415"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVYSLHSPYKPFLTATHPLSNKAETERNTRHLINKKRGKIMAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="81272" e_stop="81664"/>
            <exon e_start="82660" e_stop="82935"/>
            <exon e_start="83038" e_stop="83588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81272" e_stop="81664" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="82935" e_length="276"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82936" i_stop="83037" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="83038" e_stop="83588" e_length="551"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81272" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329245" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81303" stop="81664"/>
              <exon start="82660" stop="82893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81304" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81312" stop="81664"/>
              <exon start="82660" stop="82875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298923" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81332" stop="81664"/>
              <exon start="82660" stop="82915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81332" stop="81664"/>
              <exon start="82660" stop="82775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296147" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81335" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81339" stop="81664"/>
              <exon start="82660" stop="82892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81343" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81343" stop="81664"/>
              <exon start="82660" stop="82931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460311" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81352" stop="81664"/>
              <exon start="82660" stop="82877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81352" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325801" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81353" stop="81664"/>
              <exon start="82660" stop="82852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277351" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81353" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81356" stop="81664"/>
              <exon start="82660" stop="82785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202916" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81361" stop="81664"/>
              <exon start="82660" stop="82767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81362" stop="81614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81363" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283365" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81366" stop="81664"/>
              <exon start="82660" stop="82765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81368" stop="81664"/>
              <exon start="82660" stop="82746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81373" stop="81664"/>
              <exon start="82660" stop="82789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81376" stop="81664"/>
              <exon start="82660" stop="82844"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81379" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81379" stop="81664"/>
              <exon start="82660" stop="82847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81379" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81381" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81381" stop="81664"/>
              <exon start="82660" stop="82706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81382" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81383" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203368" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81383" stop="81664"/>
              <exon start="82660" stop="82746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81384" stop="81664"/>
              <exon start="82660" stop="82768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81385" stop="81664"/>
              <exon start="82660" stop="82926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313503" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81385" stop="81664"/>
              <exon start="82660" stop="82851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283197" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81385" stop="81584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81387" stop="81664"/>
              <exon start="82660" stop="82746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277903" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81664"/>
              <exon start="82660" stop="82932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331225" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81664"/>
              <exon start="82660" stop="82769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471581" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81390" stop="81664"/>
              <exon start="82660" stop="82768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303816" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289425" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81664"/>
              <exon start="82660" stop="82745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473183" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81396" stop="81664"/>
              <exon start="82660" stop="82850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81398" stop="81664"/>
              <exon start="82660" stop="82927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81401" stop="81664"/>
              <exon start="82660" stop="82932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81402" stop="81664"/>
              <exon start="82660" stop="82935"/>
              <exon start="83038" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81402" stop="81664"/>
              <exon start="82660" stop="82822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81402" stop="81664"/>
              <exon start="82660" stop="82740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467055" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81404" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81404" stop="81664"/>
              <exon start="82660" stop="82847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81406" stop="81664"/>
              <exon start="82660" stop="82851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294432" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81413" stop="81664"/>
              <exon start="82660" stop="82787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="82829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
              <exon start="82660" stop="82739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280596" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81437" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81449" stop="81664"/>
              <exon start="82660" stop="82933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81466" stop="81664"/>
              <exon start="82660" stop="82811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81508" stop="81664"/>
              <exon start="82660" stop="82935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82707" stop="82925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83053" stop="83588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83068" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203369" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83091" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83101" stop="83504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83137" stop="83583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83174" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83181" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83188" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234642" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83220" stop="83574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228886" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83223" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238629" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83226" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83286" stop="83570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220521" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83301" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83343" stop="83567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATCTCTTATCTTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCACAGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAG : CGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCT</gDNA_template>
            <first_frame> L  S  L  I  L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T  Y  D  E  I  Q  S  K  T  Y  M  E  V  K  G  T  G  T  A  N  Q  C  P  T  I  E  G  G  V  G  S  F  A  F  K  P  G  K  Y  T  A  K  K  F  C  L  E  P  T  S  F  T  V  K  A  E  G  V  S  K  N  S  A  P  D  F  Q  K  T  K  L  M  T  R  L  T  Y  T  L  D  E  :  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  E  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  V  Y  Y  Q  A  Q  V  I  F  H  A  G  S  Q  L  *  T  L  L  M   </first_frame>
            <second_frame>  Y  L  L  S  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E  F  Q  N  V  *  P  M  M  K  S  K  V  R  H  I  W  K  *  R  E  L  E  L  L  T  N  V  L  P  L  K  E  V  L  A  A  L  P  S  N  Q  A  N  T  L  P  R  N  S  A  *  S  P  H  H  S  Q  S  R  Q  R  V  S  A  R  T  Q  P  Q  T  S  K  K  P  S  S  *  H  A  *  P  T  L  L  M  S :   V  C  P  S  S  S  L  S  N  S  L  W  Q  A  A  S  Q  K  A  L  V  V  S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L  Y  I  I  K  L  K  *  Y  F  M  L  V  A  S  Y  K  H  F  *  C  </second_frame>
            <third_frame>   I  S  Y  L  T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R  S  S  K  T  F  N  L  *  *  N  P  K  *  D  I  Y  G  S  K  G  N  W  N  C  *  P  M  S  Y  H  *  R  R  C  W  Q  L  C  L  Q  T  R  Q  I  H  C  Q  E  I  L  P  R  A  H  I  I  H  S  Q  G  R  G  C  Q  Q  E  L  S  P  R  L  P  K  N  Q  A  H  D  T  L  N  L  H  S  *  *   : A  C  A  L  P  L  H  Y  Q  T  A  C  G  K  R  Q  A  R  K  L  *  W  *  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C  C  I  L  S  S  S  S  N  I  S  C  W  *  P  V  I  N  T  S  N  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81311" stop="81664"/>
                    <exon start="82660" stop="82935"/>
                    <exon start="83038" stop="83415"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1005</number_coding_nucleotides>
                  <number_encoded_amino_acids>335</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVYSLHSPYKPFLTATHPLSNKAETERNTRHLINKKRGKIMAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGSFAFKPGKYTAKKFCLEPTSFTVKAEGVSKNSAPDFQKTKLMTRLTYTLDERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="81284" e_stop="81664"/>
            <exon e_start="82660" e_stop="82711"/>
            <exon e_start="82894" e_stop="83588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.990"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="81284" e_stop="81664" e_length="381"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="82711" e_length="52"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82712" i_stop="82893" i_length="182"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="82894" e_stop="83588" e_length="695"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81362" stop="81614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81381" stop="81664"/>
              <exon start="82660" stop="82706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81385" stop="81584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81403" stop="81664"/>
              <exon start="82660" stop="82711"/>
              <exon start="82894" stop="83199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81424" stop="81664"/>
              <exon start="82660" stop="82711"/>
              <exon start="82894" stop="83116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279717" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578153" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403864" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433645" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82932" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82935" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371509" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82965" stop="83387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82993" stop="83414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83015" stop="83581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83018" stop="83447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83035" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616481" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83053" stop="83588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83068" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203369" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83091" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83101" stop="83504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83137" stop="83583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83174" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83181" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83188" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234642" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83220" stop="83574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228886" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83223" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238629" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83226" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83286" stop="83570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220521" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83301" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83343" stop="83567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAA : AAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCT</gDNA_template>
            <first_frame> L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T  Y  D  E  I  Q   : K  N  Q  A  H  D  T  L  N  L  H  S  *  *  D  *  G  T  I  *  S  V  S  G  W  H  C  *  V  *  G  E  G  W  N  *  L  C  C  C  Y  S  S  A  S  W  W  *  A  C  A  L  P  L  H  Y  Q  T  A  C  G  K  R  Q  A  R  K  L  *  W  *  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C  C  I  L  S  S  S  S  N  I  S  C  W  *  P  V  I  N  T  S  N  A </first_frame>
            <second_frame>  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E  F  Q  N  V  *  P  M  M  K  S  K  :  K  T  K  L  M  T  R  L  T  Y  T  L  D  E  I  E  G  P  F  E  V  S  P  D  G  T  V  K  F  E  E  K  D  G  I  D  Y  A  A  V  T  V  Q  L  P  G  G  E  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  E  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  V  Y  Y  Q  A  Q  V  I  F  H  A  G  S  Q  L  *  T  L  L  M   </second_frame>
            <third_frame>   T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R  S  S  K  T  F  N  L  *  *  N  P  K :   K  P  S  S  *  H  A  *  P  T  L  L  M  R  L  R  D  H  L  K  C  L  R  M  A  L  L  S  L  R  R  R  M  E  L  I  M  L  L  L  Q  F  S  F  L  V  V  S  V  C  P  S  S  S  L  S  N  S  L  W  Q  A  A  S  Q  K  A  L  V  V  S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L  Y  I  I  K  L  K  *  Y  F  M  L  V  A  S  Y  K  H  F  *  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82694" stop="82711"/>
                    <exon start="82894" stop="83415"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PMMKSKKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="81284" e_stop="81664"/>
            <exon e_start="82660" e_stop="82711"/>
            <exon e_start="82895" e_stop="83588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.990"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="81284" e_stop="81664" e_length="381"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="82711" e_length="52"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82712" i_stop="82894" i_length="183"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="82895" e_stop="83588" e_length="694"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81362" stop="81614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81381" stop="81664"/>
              <exon start="82660" stop="82711"/>
              <exon start="82895" stop="82939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81381" stop="81664"/>
              <exon start="82660" stop="82706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81385" stop="81584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
              <exon start="82660" stop="82709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578153" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E403864" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82903" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433645" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82932" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82935" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371509" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82965" stop="83387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82993" stop="83414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83015" stop="83581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83018" stop="83447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83035" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616481" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83053" stop="83588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83068" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203369" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83091" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83101" stop="83504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83137" stop="83583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83174" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83181" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83188" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234642" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83220" stop="83574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228886" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83223" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238629" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83226" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83286" stop="83570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220521" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83301" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83343" stop="83567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAA : AAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGGGACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCT</gDNA_template>
            <first_frame> L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T  Y  D  E  I  Q   : K  T  K  L  M  T  R  L  T  Y  T  L  D  E  I  E  G  P  F  E  V  S  P  D  G  T  V  K  F  E  E  K  D  G  I  D  Y  A  A  V  T  V  Q  L  P  G  G  E  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  E  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  V  Y  Y  Q  A  Q  V  I  F  H  A  G  S  Q  L  *  T  L  L  M   </first_frame>
            <second_frame>  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E  F  Q  N  V  *  P  M  M  K  S  K  :  K  P  S  S  *  H  A  *  P  T  L  L  M  R  L  R  D  H  L  K  C  L  R  M  A  L  L  S  L  R  R  R  M  E  L  I  M  L  L  L  Q  F  S  F  L  V  V  S  V  C  P  S  S  S  L  S  N  S  L  W  Q  A  A  S  Q  K  A  L  V  V  S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L  Y  I  I  K  L  K  *  Y  F  M  L  V  A  S  Y  K  H  F  *  C  </second_frame>
            <third_frame>   T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R  S  S  K  T  F  N  L  *  *  N  P  K :   N  Q  A  H  D  T  L  N  L  H  S  *  *  D  *  G  T  I  *  S  V  S  G  W  H  C  *  V  *  G  E  G  W  N  *  L  C  C  C  Y  S  S  A  S  W  W  *  A  C  A  L  P  L  H  Y  Q  T  A  C  G  K  R  Q  A  R  K  L  *  W  *  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C  C  I  L  S  S  S  S  N  I  S  C  W  *  P  V  I  N  T  S  N  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81311" stop="81664"/>
                    <exon start="82660" stop="82711"/>
                    <exon start="82895" stop="83415"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>924</number_coding_nucleotides>
                  <number_encoded_amino_acids>308</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVYSLHSPYKPFLTATHPLSNKAETERNTRHLINKKRGKIMAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="81284" e_stop="81664"/>
            <exon e_start="82660" e_stop="82694"/>
            <exon e_start="82946" e_stop="83588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.990"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="81284" e_stop="81664" e_length="381"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="82694" e_length="35"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82695" i_stop="82945" i_length="251"/>
          </intron>
          <exon e_serial="3" e_score="0.972">
            <gDNA_exon_boundary e_start="82946" e_stop="83588" e_length="643"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81362" stop="81614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81385" stop="81584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81456" stop="81664"/>
              <exon start="82660" stop="82694"/>
              <exon start="82946" stop="83318"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344293" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82965" stop="83387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82993" stop="83414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83015" stop="83581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83018" stop="83447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83035" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616481" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83053" stop="83588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83068" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203369" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83091" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235122" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83101" stop="83504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574824" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83137" stop="83583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83174" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83181" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83188" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234642" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83220" stop="83574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228886" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83223" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238629" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83226" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83286" stop="83570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220521" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83301" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83343" stop="83567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAAC : CATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTCCTGGTGGTGAGCGTGTGCCCTTCCTCTTCACTATCAAACAGCTTGTGGCAAGCGGCAAGCCAGAAAGCTTTAGTGGTGAGTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTAATGCT</gDNA_template>
            <first_frame> L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  V  P  K  R  L  T :   I  *  S  V  S  G  W  H  C  *  V  *  G  E  G  W  N  *  L  C  C  C  Y  S  S  A  S  W  W  *  A  C  A  L  P  L  H  Y  Q  T  A  C  G  K  R  Q  A  R  K  L  *  W  *  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C  C  I  L  S  S  S  S  N  I  S  C  W  *  P  V  I  N  T  S  N  A </first_frame>
            <second_frame>  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E  F  Q  N  V  *   : P  F  E  V  S  P  D  G  T  V  K  F  E  E  K  D  G  I  D  Y  A  A  V  T  V  Q  L  P  G  G  E  R  V  P  F  L  F  T  I  K  Q  L  V  A  S  G  K  P  E  S  F  S  G  E  F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  V  Y  Y  Q  A  Q  V  I  F  H  A  G  S  Q  L  *  T  L  L  M   </second_frame>
            <third_frame>   T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R  S  S  K  T  F  N  :  H  L  K  C  L  R  M  A  L  L  S  L  R  R  R  M  E  L  I  M  L  L  L  Q  F  S  F  L  V  V  S  V  C  P  S  S  S  L  S  N  S  L  W  Q  A  A  S  Q  K  A  L  V  V  S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L  Y  I  I  K  L  K  *  Y  F  M  L  V  A  S  Y  K  H  F  *  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82694" stop="83415"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFEVSPDGTVKFEEKDGIDYAAVTVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="7" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81311" stop="81664"/>
                    <exon start="82660" stop="82694"/>
                    <exon start="82946" stop="82952"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVYSLHSPYKPFLTATHPLSNKAETERNTRHLINKKRGKIMAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPKRLTI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="7" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81613" stop="81664"/>
                    <exon start="82660" stop="82694"/>
                    <exon start="82946" stop="83242"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCQDCWFCSCHLCPRRLGSKCGRSSKTFNHLKCLRMALLSLRRRMELIMLLLQFSFLVVSVCPSSSLSNSLWQAASQKALVVSSLCHHTEVHPSLTQRDEVDLLAMTTLLHCLLEGEETRRSFRRRT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="81284" e_stop="81664"/>
            <exon e_start="82660" e_stop="82677"/>
            <exon e_start="83106" e_stop="83583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.990"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="81284" e_stop="81664" e_length="381"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="81665" i_stop="82659" i_length="995"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82660" e_stop="82677" e_length="18"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82678" i_stop="83105" i_length="428"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83106" e_stop="83583" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81284" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81362" stop="81614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81385" stop="81584"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291215" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81389" stop="81587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291497" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81391" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81392" stop="81604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81416" stop="81664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81447" stop="81664"/>
              <exon start="82660" stop="82677"/>
              <exon start="83106" stop="83358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467258" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83107" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83137" stop="83583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83174" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217756" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83181" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238827" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83185" stop="83526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E216275" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83188" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234642" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83220" stop="83574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228886" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83223" stop="83577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238629" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83226" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83286" stop="83570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220521" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83301" stop="83544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218256" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83343" stop="83567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280617" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACTCACAGCAAAGCCACCAAAATAATTTGTCTACTCTCTCCATAGTCCATACAAACCATTTCTTACTGCCACTCATCCACTTTCTAACAAAGCAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCGACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTGCTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCTCG : GGAGCAAATGCGGAAGGA : GTTCCTTGTGCCATCATACAGAGGTTCATCCTTCCTTGACCCAAAGGGACGAGGTGGATCTACTGGCTATGACAACGCTGTTGCATTGCCTGCTGGAGGGAGAGGAGACGAGGAGGAGCTTCAGAAGGAGAACGTAAAGAACACTGCATCTTTAACAGGAAAGATCACCTTGAGTGTTACCCAGAGCAAGCCAGAGACTGGTGAGGTCATTGGAGTATTTGAGAGCATCCAGCCATCTGATACTGATCTGGGGGCAAAGGTTCCCAAGGATGTCAAAATCCAGGGTATCTGGTATGCCCAACTTGAATGATGGAGAGTTCTAGAATGTGTGTATCATTTCTTGGTCTAAATTTTGTTGTAAGTTACAAGGTTAAACATTCTGTGACCCAATTTGGACAAGCACTGAAACAACTATCTTGCTGTATATTATCAAGCTCAAGTAATATTTCATGCTGGTAGCCAGTTATAAACACTTCTA</gDNA_template>
            <first_frame> L  L  T  A  K  P  P  K  *  F  V  Y  S  L  H  S  P  Y  K  P  F  L  T  A  T  H  P  L  S  N  K  A  E  T  E  R  N  T  R  H  L  I  N  K  K  R  G  K  I  M  A  A  S  L  Q  A  A  A  T  L  M  Q  P  T  K  V  G  V  R  N  N  L  Q  L  R  S  A  Q  S  V  S  K  A  F  G  V  E  Q  G  S  G  R  L  T  C  S  L  Q  T  E  I  K  E  L  A  Q  K  C  T  D  A  A  K  I  A  G  F  A  L  A  T  S  A  L  V  V  S  :  G  A  N  A  E  G  :  V  P  C  A  I  I  Q  R  F  I  L  P  *  P  K  G  T  R  W  I  Y  W  L  *  Q  R  C  C  I  A  C  W  R  E  R  R  R  G  G  A  S  E  G  E  R  K  E  H  C  I  F  N  R  K  D  H  L  E  C  Y  P  E  Q  A  R  D  W  *  G  H  W  S  I  *  E  H  P  A  I  *  Y  *  S  G  G  K  G  S  Q  G  C  Q  N  P  G  Y  L  V  C  P  T  *  M  M  E  S  S  R  M  C  V  S  F  L  G  L  N  F  V  V  S  Y  K  V  K  H  S  V  T  Q  F  G  Q  A  L  K  Q  L  S  C  C  I  L  S  S  S  S  N  I  S  C  W  *  P  V  I  N  T  S  </first_frame>
            <second_frame>  Y  S  Q  Q  S  H  Q  N  N  L  S  T  L  S  I  V  H  T  N  H  F  L  L  P  L  I  H  F  L  T  K  Q  K  Q  R  G  T  Q  D  I  *  S  T  K  K  G  V  K  L  W  L  P  L  Y  K  Q  L  L  L  L  C  N  R  Q  R  L  V  L  E  T  T  C  S  *  G  L  L  K  V  *  A  K  H  L  V  L  N  K  V  Q  A  G  L  L  A  L  C  K  L  K  S  R  N  W  L  R  N  V  L  M  L  P  R  L  L  V  L  L  L  P  P  L  P  S  S  S  R :   E  Q  M  R  K  E :   F  L  V  P  S  Y  R  G  S  S  F  L  D  P  K  G  R  G  G  S  T  G  Y  D  N  A  V  A  L  P  A  G  G  R  G  D  E  E  E  L  Q  K  E  N  V  K  N  T  A  S  L  T  G  K  I  T  L  S  V  T  Q  S  K  P  E  T  G  E  V  I  G  V  F  E  S  I  Q  P  S  D  T  D  L  G  A  K  V  P  K  D  V  K  I  Q  G  I  W  Y  A  Q  L  E  *  W  R  V  L  E  C  V  Y  H  F  L  V  *  I  L  L  *  V  T  R  L  N  I  L  *  P  N  L  D  K  H  *  N  N  Y  L  A  V  Y  Y  Q  A  Q  V  I  F  H  A  G  S  Q  L  *  T  L  L </second_frame>
            <third_frame>   T  H  S  K  A  T  K  I  I  C  L  L  S  P  *  S  I  Q  T  I  S  Y  C  H  S  S  T  F  *  Q  S  R  N  R  E  E  H  K  T  F  D  Q  Q  K  K  G  *  N  Y  G  C  L  S  T  S  S  C  Y  S  Y  A  T  D  K  G  W  C  *  K  Q  P  A  V  E  V  C  S  K  C  E  Q  S  I  W  C  *  T  R  F  R  Q  A  Y  L  L  F  A  N  *  N  Q  G  I  G  S  E  M  Y  *  C  C  Q  D  C  W  F  C  S  C  H  L  C  P  R  R  L   : G  S  K  C  G  R   : S  S  L  C  H  H  T  E  V  H  P  S  L  T  Q  R  D  E  V  D  L  L  A  M  T  T  L  L  H  C  L  L  E  G  E  E  T  R  R  S  F  R  R  R  T  *  R  T  L  H  L  *  Q  E  R  S  P  *  V  L  P  R  A  S  Q  R  L  V  R  S  L  E  Y  L  R  A  S  S  H  L  I  L  I  W  G  Q  R  F  P  R  M  S  K  S  R  V  S  G  M  P  N  L  N  D  G  E  F  *  N  V  C  I  I  S  W  S  K  F  C  C  K  L  Q  G  *  T  F  C  D  P  I  W  T  S  T  E  T  T  I  L  L  Y  I  I  K  L  K  *  Y  F  M  L  V  A  S  Y  K  H  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81525" stop="81664"/>
                    <exon start="82660" stop="82677"/>
                    <exon start="83106" stop="83415"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKHLVLNKVQAGLLALCKLKSRNWLRNVLMLPRLLVLLLPPLPSSSREQMRKEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="8" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81311" stop="81664"/>
                    <exon start="82660" stop="82677"/>
                    <exon start="83106" stop="83144"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVYSLHSPYKPFLTATHPLSNKAETERNTRHLINKKRGKIMAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAEGVPCAIIQRFILP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="84328" PGL_stop="81413"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83589" e_stop="82779"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="83589" e_stop="82779" e_length="811"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83589" stop="83099"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219812" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83589" stop="83222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83580" stop="82895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372421" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83557" stop="83076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83545" stop="82826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371503" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83527" stop="82890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E571818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83516" stop="82779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414798" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83434" stop="82991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283628" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCATTAGAAGTGTTTATAACTGGCTACCAGCATGAAATATTACTTGAGCTTGATAATATACAGCAAGATAGTTGTTTCAGTGCTTGTCCAAATTGGGTCACAGAATGTTTAACCTTGTAACTTACAACAAAATTTAGACCAAGAAATGATACACACATTCTAGAACTCTCCATCATTCAAGTTGGGCATACCAGATACCCTGGATTTTGACATCCTTGGGAACCTTTGCCCCCAGATCAGTATCAGATGGCTGGATGCTCTCAAATACTCCAATGACCTCACCAGTCTCTGGCTTGCTCTGGGTAACACTCAAGGTGATCTTTCCTGTTAAAGATGCAGTGTTCTTTACGTTCTCCTTCTGAAGCTCCTCCTCGTCTCCTCTCCCTCCAGCAGGCAATGCAACAGCGTTGTCATAGCCAGTAGATCCACCTCGTCCCTTTGGGTCAAGGAAGGATGAACCTCTGTATGATGGCACAAGGAACTCACCACTAAAGCTTTCTGGCTTGCCGCTTGCCACAAGCTGTTTGATAGTGAAGAGGAAGGGCACACGCTCACCACCAGGAAGCTGAACTGTAACAGCAGCATAATCAATTCCATCCTTCTCCTCAAACTTAACAGTGCCATCCGGAGACACTTCAAATGGTCCCTCAATCTCATCAAGAGTGTAGGTTAAGCGTGTCATGAGCTTGGTTTTTTGGAAGTCTGGGGCTGAGTTCTTGCTGACACCCTCTGCCTTGACTGTGAATGATGTGGGCTCTAGGCAGAATTTCTTGGCAGTGTATTTGCCTGGTTTGAAGGCAAAGCTGCCA</gDNA_template>
            <first_frame> K  H  *  K  C  L  *  L  A  T  S  M  K  Y  Y  L  S  L  I  I  Y  S  K  I  V  V  S  V  L  V  Q  I  G  S  Q  N  V  *  P  C  N  L  Q  Q  N  L  D  Q  E  M  I  H  T  F  *  N  S  P  S  F  K  L  G  I  P  D  T  L  D  F  D  I  L  G  N  L  C  P  Q  I  S  I  R  W  L  D  A  L  K  Y  S  N  D  L  T  S  L  W  L  A  L  G  N  T  Q  G  D  L  S  C  *  R  C  S  V  L  Y  V  L  L  L  K  L  L  L  V  S  S  P  S  S  R  Q  C  N  S  V  V  I  A  S  R  S  T  S  S  L  W  V  K  E  G  *  T  S  V  *  W  H  K  E  L  T  T  K  A  F  W  L  A  A  C  H  K  L  F  D  S  E  E  E  G  H  T  L  T  T  R  K  L  N  C  N  S  S  I  I  N  S  I  L  L  L  K  L  N  S  A  I  R  R  H  F  K  W  S  L  N  L  I  K  S  V  G  *  A  C  H  E  L  G  F  L  E  V  W  G  *  V  L  A  D  T  L  C  L  D  C  E  *  C  G  L  *  A  E  F  L  G  S  V  F  A  W  F  E  G  K  A  A  </first_frame>
            <second_frame>  S  I  R  S  V  Y  N  W  L  P  A  *  N  I  T  *  A  *  *  Y  T  A  R  *  L  F  Q  C  L  S  K  L  G  H  R  M  F  N  L  V  T  Y  N  K  I  *  T  K  K  *  Y  T  H  S  R  T  L  H  H  S  S  W  A  Y  Q  I  P  W  I  L  T  S  L  G  T  F  A  P  R  S  V  S  D  G  W  M  L  S  N  T  P  M  T  S  P  V  S  G  L  L  W  V  T  L  K  V  I  F  P  V  K  D  A  V  F  F  T  F  S  F  *  S  S  S  S  S  P  L  P  P  A  G  N  A  T  A  L  S  *  P  V  D  P  P  R  P  F  G  S  R  K  D  E  P  L  Y  D  G  T  R  N  S  P  L  K  L  S  G  L  P  L  A  T  S  C  L  I  V  K  R  K  G  T  R  S  P  P  G  S  *  T  V  T  A  A  *  S  I  P  S  F  S  S  N  L  T  V  P  S  G  D  T  S  N  G  P  S  I  S  S  R  V  *  V  K  R  V  M  S  L  V  F  W  K  S  G  A  E  F  L  L  T  P  S  A  L  T  V  N  D  V  G  S  R  Q  N  F  L  A  V  Y  L  P  G  L  K  A  K  L  P </second_frame>
            <third_frame>   A  L  E  V  F  I  T  G  Y  Q  H  E  I  L  L  E  L  D  N  I  Q  Q  D  S  C  F  S  A  C  P  N  W  V  T  E  C  L  T  L  *  L  T  T  K  F  R  P  R  N  D  T  H  I  L  E  L  S  I  I  Q  V  G  H  T  R  Y  P  G  F  *  H  P  W  E  P  L  P  P  D  Q  Y  Q  M  A  G  C  S  Q  I  L  Q  *  P  H  Q  S  L  A  C  S  G  *  H  S  R  *  S  F  L  L  K  M  Q  C  S  L  R  S  P  S  E  A  P  P  R  L  L  S  L  Q  Q  A  M  Q  Q  R  C  H  S  Q  *  I  H  L  V  P  L  G  Q  G  R  M  N  L  C  M  M  A  Q  G  T  H  H  *  S  F  L  A  C  R  L  P  Q  A  V  *  *  *  R  G  R  A  H  A  H  H  Q  E  A  E  L  *  Q  Q  H  N  Q  F  H  P  S  P  Q  T  *  Q  C  H  P  E  T  L  Q  M  V  P  Q  S  H  Q  E  C  R  L  S  V  S  *  A  W  F  F  G  S  L  G  L  S  S  C  *  H  P  L  P  *  L  *  M  M  W  A  L  G  R  I  S  W  Q  C  I  C  L  V  *  R  Q  S  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83438" stop="83226"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YTHSRTLHHSSWAYQIPWILTSLGTFAPRSVSDGWMLSNTPMTSPVSGLLWVTLKVIFPVKDAVFFTFSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83118" stop="82915"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WHKELTTKAFWLAACHKLFDSEEEGHTLTTRKLNCNSSIINSILLLKLNSAIRRHFKWSLNLIKSVG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="84328" e_stop="83924"/>
            <exon e_start="81734" e_stop="81413"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.958" acc_prob="0.999" e_score="0.975"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="84328" e_stop="83924" e_length="405"/>
          </exon>
          <intron i_serial="1" don_prob="0.958" acc_prob="0.999">
            <gDNA_intron_boundary i_start="83923" i_stop="81735" i_length="2189"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81734" e_stop="81413" e_length="322"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84328" stop="83924"/>
              <exon start="81734" stop="81478"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84149" stop="83924"/>
              <exon start="81734" stop="81413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAGCTGATAATACTATGAAGAAGGTTCTTTTCATTTTTCTCCAAGGAAAATAGAAGTCTGCAGATATCATCCACTGTGACCATGCTTGCGGGTGCAACTAACAATTTAGAATTTTTCGCTGGCACAAGCTCCATGAGATATACTCAGCACAAAGGTTCTACGTCCTATCCCTGTATGCAAAAATGTAACAATTTTCTTCTAACCACTTTTAGGCACCCTATTATATGTCTGAAGGTTTTCCTTTCAGAGCGGTGAAGTCCTAAGCTAGAGAAGAAAGGTTCTAGTGCCAGGTTGATACCTGGGACTAGAATACGAATTCTATATGTTTGGAAGTCAATATTGAAAACAATAAGATGATTATTACTTCATTGGAGCTTAGCGGGGTTAAGTGAACCCAAGGAAGA : GCAACAGCACTGGATACATGGGAAATATAGACATGAAGCAGGCAAGCATTGAATTAGAAAAGCAACTTACCGAGACGACGAGGGCAGAGGTGGCAAGAGCAAAACCAGCAATCTTGGCAGCATCAGTACATTTCTGAGCCAATTCCTTGATTTCAGTTTGCAAAGAGCAAGTAAGCCTGCCTGAACCTTGTTCAACACCAAATGCTTTGCTCACACTTTGAGCAGACCTCAACTGCAGGTTGTTTCTAACACCAACCTTTGTCGGTTGCATAAGAGTAGCAGCTGCTTGTAGAGAGGCAGCCATAATTTTACCCCTTTTTTT</gDNA_template>
            <first_frame> *  A  D  N  T  M  K  K  V  L  F  I  F  L  Q  G  K  *  K  S  A  D  I  I  H  C  D  H  A  C  G  C  N  *  Q  F  R  I  F  R  W  H  K  L  H  E  I  Y  S  A  Q  R  F  Y  V  L  S  L  Y  A  K  M  *  Q  F  S  S  N  H  F  *  A  P  Y  Y  M  S  E  G  F  P  F  R  A  V  K  S  *  A  R  E  E  R  F  *  C  Q  V  D  T  W  D  *  N  T  N  S  I  C  L  E  V  N  I  E  N  N  K  M  I  I  T  S  L  E  L  S  G  V  K  *  T  Q  G  R  :  A  T  A  L  D  T  W  E  I  *  T  *  S  R  Q  A  L  N  *  K  S  N  L  P  R  R  R  G  Q  R  W  Q  E  Q  N  Q  Q  S  W  Q  H  Q  Y  I  S  E  P  I  P  *  F  Q  F  A  K  S  K  *  A  C  L  N  L  V  Q  H  Q  M  L  C  S  H  F  E  Q  T  S  T  A  G  C  F  *  H  Q  P  L  S  V  A  *  E  *  Q  L  L  V  E  R  Q  P  *  F  Y  P  F  F  </first_frame>
            <second_frame>  K  L  I  I  L  *  R  R  F  F  S  F  F  S  K  E  N  R  S  L  Q  I  S  S  T  V  T  M  L  A  G  A  T  N  N  L  E  F  F  A  G  T  S  S  M  R  Y  T  Q  H  K  G  S  T  S  Y  P  C  M  Q  K  C  N  N  F  L  L  T  T  F  R  H  P  I  I  C  L  K  V  F  L  S  E  R  *  S  P  K  L  E  K  K  G  S  S  A  R  L  I  P  G  T  R  I  R  I  L  Y  V  W  K  S  I  L  K  T  I  R  *  L  L  L  H  W  S  L  A  G  L  S  E  P  K  E  E :   Q  Q  H  W  I  H  G  K  Y  R  H  E  A  G  K  H  *  I  R  K  A  T  Y  R  D  D  E  G  R  G  G  K  S  K  T  S  N  L  G  S  I  S  T  F  L  S  Q  F  L  D  F  S  L  Q  R  A  S  K  P  A  *  T  L  F  N  T  K  C  F  A  H  T  L  S  R  P  Q  L  Q  V  V  S  N  T  N  L  C  R  L  H  K  S  S  S  C  L  *  R  G  S  H  N  F  T  P  F  F </second_frame>
            <third_frame>   S  *  *  Y  Y  E  E  G  S  F  H  F  S  P  R  K  I  E  V  C  R  Y  H  P  L  *  P  C  L  R  V  Q  L  T  I  *  N  F  S  L  A  Q  A  P  *  D  I  L  S  T  K  V  L  R  P  I  P  V  C  K  N  V  T  I  F  F  *  P  L  L  G  T  L  L  Y  V  *  R  F  S  F  Q  S  G  E  V  L  S  *  R  R  K  V  L  V  P  G  *  Y  L  G  L  E  Y  E  F  Y  M  F  G  S  Q  Y  *  K  Q  *  D  D  Y  Y  F  I  G  A  *  R  G  *  V  N  P  R  K   : S  N  S  T  G  Y  M  G  N  I  D  M  K  Q  A  S  I  E  L  E  K  Q  L  T  E  T  T  R  A  E  V  A  R  A  K  P  A  I  L  A  A  S  V  H  F  *  A  N  S  L  I  S  V  C  K  E  Q  V  S  L  P  E  P  C  S  T  P  N  A  L  L  T  L  *  A  D  L  N  C  R  L  F  L  T  P  T  F  V  G  C  I  R  V  A  A  A  C  R  E  A  A  I  I  L  P  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84309" stop="84073"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRFFSFFSKENRSLQISSTVTMLAGATNNLEFFAGTSSMRYTQHKGSTSYPCMQKCNNFLLTTFRHPIICLKVFLSER*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="88760" PGL_stop="91756"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88760" e_stop="89036"/>
            <exon e_start="91265" e_stop="91397"/>
            <exon e_start="91480" e_stop="91756"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.996" e_score="0.909"/>
          <exon-intron don_prob="0.979" acc_prob="0.980" e_score="0.925"/>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="88760" e_stop="89036" e_length="277"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.996">
            <gDNA_intron_boundary i_start="89037" i_stop="91264" i_length="2228"/>
          </intron>
          <exon e_serial="2" e_score="0.925">
            <gDNA_exon_boundary e_start="91265" e_stop="91397" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.980">
            <gDNA_intron_boundary i_start="91398" i_stop="91479" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="0.909">
            <gDNA_exon_boundary e_start="91480" e_stop="91756" e_length="277"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88760" stop="89036"/>
              <exon start="91265" stop="91397"/>
              <exon start="91480" stop="91673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88762" stop="89036"/>
              <exon start="91265" stop="91397"/>
              <exon start="91480" stop="91732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88812" stop="89036"/>
              <exon start="91265" stop="91397"/>
              <exon start="91480" stop="91756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428489" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTATTATTTTCCCCAAAATTCCTTTTCGCATTCCATTCACTCCGTTTCAAAACAAAAAAAAACTGCACATTATTGATTGAGTTGCAGAATTCTGACAAACACAACAAGGTAAATCGCTCTGTGGCGTGCTACTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCTGGTTTAGCTTTGCGATTAGGACAGGCTATTTTCTCTGTCAGTTCACTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTAAGCTACAGCTACGCTCCCTTCTG : CTTTTTGGTGACAACCATGGGTTTGGTAACACCATGGAGTTTGGGATTGGCAATGATTGATACATTTCTAGTCTTGGCTAAACGCCCATCTAATCAGCCCAGAGTATTGACAGCTGTTGTTTTAGGAGATTGG : GTCCTTTCGGTACTGTCACTGGCTGTGTCGTGTTCCACAGCTAGTGTGGCTGATTTCCTGATTGCTTCTGGTAATGTATACTGCAGAGATAACATATGCCTACGGTATCAACTCTCTGCTGCCATGGCTTTCTTGACTTGGATTTTGTCATCGGCGTCTTTGCTCTTGAATCTTTGGCTTCTTCCTACATTATATTAGTTGCATCTCTGGTCCTTGTCCCCTCCTGGTTGTCTCTTGATTTAACGAATAGGAAGTAACAATTGTGACCGATCTATTC</gDNA_template>
            <first_frame> T  I  I  F  P  K  I  P  F  R  I  P  F  T  P  F  Q  N  K  K  K  L  H  I  I  D  *  V  A  E  F  *  Q  T  Q  Q  G  K  S  L  C  G  V  L  L  M  K  W  I  N  S  R  G  L  W  G  R  V  L  V  *  L  C  D  *  D  R  L  F  S  L  S  V  H  F  F  S  C  V  L  V  F  L  S  *  A  T  A  T  L  P  S   : A  F  W  *  Q  P  W  V  W  *  H  H  G  V  W  D  W  Q  *  L  I  H  F  *  S  W  L  N  A  H  L  I  S  P  E  Y  *  Q  L  L  F  *  E  I  G :   S  F  R  Y  C  H  W  L  C  R  V  P  Q  L  V  W  L  I  S  *  L  L  L  V  M  Y  T  A  E  I  T  Y  A  Y  G  I  N  S  L  L  P  W  L  S  *  L  G  F  C  H  R  R  L  C  S  *  I  F  G  F  F  L  H  Y  I  S  C  I  S  G  P  C  P  L  L  V  V  S  *  F  N  E  *  E  V  T  I  V  T  D  L  F </first_frame>
            <second_frame>  L  L  F  S  P  K  F  L  F  A  F  H  S  L  R  F  K  T  K  K  N  C  T  L  L  I  E  L  Q  N  S  D  K  H  N  K  V  N  R  S  V  A  C  Y  *  *  N  G  *  T  A  G  G  Y  G  D  E  C  W  F  S  F  A  I  R  T  G  Y  F  L  C  Q  F  T  S  F  H  V  F  W  C  F  F  L  K  L  Q  L  R  S  L  L  :  L  F  G  D  N  H  G  F  G  N  T  M  E  F  G  I  G  N  D  *  Y  I  S  S  L  G  *  T  P  I  *  S  A  Q  S  I  D  S  C  C  F  R  R  L   : G  P  F  G  T  V  T  G  C  V  V  F  H  S  *  C  G  *  F  P  D  C  F  W  *  C  I  L  Q  R  *  H  M  P  T  V  S  T  L  C  C  H  G  F  L  D  L  D  F  V  I  G  V  F  A  L  E  S  L  A  S  S  Y  I  I  L  V  A  S  L  V  L  V  P  S  W  L  S  L  D  L  T  N  R  K  *  Q  L  *  P  I  Y   </second_frame>
            <third_frame>   Y  Y  F  P  Q  N  S  F  S  H  S  I  H  S  V  S  K  Q  K  K  T  A  H  Y  *  L  S  C  R  I  L  T  N  T  T  R  *  I  A  L  W  R  A  T  D  E  M  D  K  Q  P  G  A  M  G  T  S  A  G  L  A  L  R  L  G  Q  A  I  F  S  V  S  S  L  L  F  M  C  F  G  V  S  F  L  S  Y  S  Y  A  P  F  C :   F  L  V  T  T  M  G  L  V  T  P  W  S  L  G  L  A  M  I  D  T  F  L  V  L  A  K  R  P  S  N  Q  P  R  V  L  T  A  V  V  L  G  D  W  :  V  L  S  V  L  S  L  A  V  S  C  S  T  A  S  V  A  D  F  L  I  A  S  G  N  V  Y  C  R  D  N  I  C  L  R  Y  Q  L  S  A  A  M  A  F  L  T  W  I  L  S  S  A  S  L  L  L  N  L  W  L  L  P  T  L  Y  *  L  H  L  W  S  L  S  P  P  G  C  L  L  I  *  R  I  G  S  N  N  C  D  R  S  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88873" stop="89036"/>
                    <exon start="91265" stop="91397"/>
                    <exon start="91480" stop="91677"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IALWRATDEMDKQPGAMGTSAGLALRLGQAIFSVSSLLFMCFGVSFLSYSYAPFCFLVTTMGLVTPWSLGLAMIDTFLVLAKRPSNQPRVLTAVVLGDWVLSVLSLAVSCSTASVADFLIASGNVYCRDNICLRYQLSAAMAFLTWILSSASLLLNLWLLPTLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88792" e_stop="89566"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="88792" e_stop="89566" e_length="775"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88792" stop="89566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553565" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCATTCACTCCGTTTCAAAACAAAAAAAAACTGCACATTATTGATTGAGTTGCAGAATTCTGACAAACACAACAAGGTAAATCGCTCTGTGGCGTGCTACTGATGAAATGGATAAACAGCCGGGGGCTATGGGGACGAGTGCTGGTTTAGCTTTGCGATTAGGACAGGCTATTTTCTCTGTCAGTTCACTTCTTTTCATGTGTTTTGGTGTTTCTTTCTTAAGCTACAGCTACGCTCCCTTCTGGTACTTGAATTTTTTTATTTTTTTTTTAATTTCATCTCTTTTCACTATTCATCTCTTTTTTTCTTCTTCCTCGAGGTAATTTATTTCTGATTGTTGCTGTTTAAATCTTTGAATTTGGTGGGCTCTTGAAATTGGCATGTAAGTGAGATGAGTGGATTGAAAAGATTGAGCAGCCGATTGTAAGGAAACTAAACTTGAATTAGGCCTTAGCATGAGTACTTTTCATTTGTCTTAGCATCGGTGGATAGAGTTATCTGATATAAATTAGTTGAGGGCTAACCCGGAGTACCGGACACCATGATCATCAAATAAAGAAAAACCAAAATCTTTCCACTTTGAACTGTTAGGCACTTTTGAAATTACCACGTGATTGTCCAGTAGAGAGCTTTCATTGACCTTTTAAAGGTGTAAATAAAAAGAACTTCACAAGAGAGTTGTGAAGTTCATTTTCAGTATGGAGTCTGGAAGAAATGGTCAAATGCACATAAAGAAGCTTATATGTTGGATATATGCTTGGGTTATTTTATTGG</gDNA_template>
            <first_frame> S  I  H  S  V  S  K  Q  K  K  T  A  H  Y  *  L  S  C  R  I  L  T  N  T  T  R  *  I  A  L  W  R  A  T  D  E  M  D  K  Q  P  G  A  M  G  T  S  A  G  L  A  L  R  L  G  Q  A  I  F  S  V  S  S  L  L  F  M  C  F  G  V  S  F  L  S  Y  S  Y  A  P  F  W  Y  L  N  F  F  I  F  F  L  I  S  S  L  F  T  I  H  L  F  F  S  S  S  S  R  *  F  I  S  D  C  C  C  L  N  L  *  I  W  W  A  L  E  I  G  M  *  V  R  *  V  D  *  K  D  *  A  A  D  C  K  E  T  K  L  E  L  G  L  S  M  S  T  F  H  L  S  *  H  R  W  I  E  L  S  D  I  N  *  L  R  A  N  P  E  Y  R  T  P  *  S  S  N  K  E  K  P  K  S  F  H  F  E  L  L  G  T  F  E  I  T  T  *  L  S  S  R  E  L  S  L  T  F  *  R  C  K  *  K  E  L  H  K  R  V  V  K  F  I  F  S  M  E  S  G  R  N  G  Q  M  H  I  K  K  L  I  C  W  I  Y  A  W  V  I  L  L  </first_frame>
            <second_frame>  P  F  T  P  F  Q  N  K  K  K  L  H  I  I  D  *  V  A  E  F  *  Q  T  Q  Q  G  K  S  L  C  G  V  L  L  M  K  W  I  N  S  R  G  L  W  G  R  V  L  V  *  L  C  D  *  D  R  L  F  S  L  S  V  H  F  F  S  C  V  L  V  F  L  S  *  A  T  A  T  L  P  S  G  T  *  I  F  L  F  F  F  *  F  H  L  F  S  L  F  I  S  F  F  L  L  P  R  G  N  L  F  L  I  V  A  V  *  I  F  E  F  G  G  L  L  K  L  A  C  K  *  D  E  W  I  E  K  I  E  Q  P  I  V  R  K  L  N  L  N  *  A  L  A  *  V  L  F  I  C  L  S  I  G  G  *  S  Y  L  I  *  I  S  *  G  L  T  R  S  T  G  H  H  D  H  Q  I  K  K  N  Q  N  L  S  T  L  N  C  *  A  L  L  K  L  P  R  D  C  P  V  E  S  F  H  *  P  F  K  G  V  N  K  K  N  F  T  R  E  L  *  S  S  F  S  V  W  S  L  E  E  M  V  K  C  T  *  R  S  L  Y  V  G  Y  M  L  G  L  F  Y  W </second_frame>
            <third_frame>   H  S  L  R  F  K  T  K  K  N  C  T  L  L  I  E  L  Q  N  S  D  K  H  N  K  V  N  R  S  V  A  C  Y  *  *  N  G  *  T  A  G  G  Y  G  D  E  C  W  F  S  F  A  I  R  T  G  Y  F  L  C  Q  F  T  S  F  H  V  F  W  C  F  F  L  K  L  Q  L  R  S  L  L  V  L  E  F  F  Y  F  F  F  N  F  I  S  F  H  Y  S  S  L  F  F  F  F  L  E  V  I  Y  F  *  L  L  L  F  K  S  L  N  L  V  G  S  *  N  W  H  V  S  E  M  S  G  L  K  R  L  S  S  R  L  *  G  N  *  T  *  I  R  P  *  H  E  Y  F  S  F  V  L  A  S  V  D  R  V  I  *  Y  K  L  V  E  G  *  P  G  V  P  D  T  M  I  I  K  *  R  K  T  K  I  F  P  L  *  T  V  R  H  F  *  N  Y  H  V  I  V  Q  *  R  A  F  I  D  L  L  K  V  *  I  K  R  T  S  Q  E  S  C  E  V  H  F  Q  Y  G  V  W  K  K  W  S  N  A  H  K  E  A  Y  M  L  D  I  C  L  G  Y  F  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88873" stop="89115"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IALWRATDEMDKQPGAMGTSAGLALRLGQAIFSVSSLLFMCFGVSFLSYSYAPFWYLNFFIFFLISSLFTIHLFFSSSSR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0163K16.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88908" stop="89126"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAGGYGDECWFSFAIRTGYFLCQFTSFHVFWCFFLKLQLRSLLVLEFFYFFFNFISFHYSSLFFFFLEVIYF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 517 chains have been computed
$ 
$ memory statistics:
$ 607576 bytes spliced alignments in total
$ 265 spliced alignments have been stored
$ 2292 bytes was the average size of a spliced alignment
$ 31240 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 2082 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 587 backtrace matrices have been allocated
$ 
$ date finished: 2006-11-03 16:18:34
-->
