<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:05:39"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584781" ref_strand="+" ref_description="SGN-U584781 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|77745507|gb|ABB02652.1| (e_value=4e-80) adenylate kinase family-like protein [Solanum tuberosum]; (*ATH) AT3G01820.1 (e_value=4e-53) | Symbol: None | adenylate kinase family protein, contains Pfam profile: PF00406 adenylate kinase | chr3:293784-295441 REVERSE | Aliases: F28J7.15, F28J7_15; (*SWP) sp|Q9ZUU1|KADC1_ARATH (e_value=3e-32) Probable adenylate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=At2g37250; ">
      <seq>catgggagtttccgcccgaacatttcttcgggctgcttcaagcaagtcggttcgggcctacggttcagctgttgcagctcactttgattacgacaatgaggaggatatggaggaaccatcaggatcagttccacgcagaggagtacagtggctgatcatgggtcatccaatgacgcagagacacgtgtacgcccaatggctgtccaaacttatggacgttccatatatttccatgggctctctcgtacctcaacaactcaaccctcactataacaagatatcaagtgttgtgaatgagggaaagcatgttccagaagaagttatttttggtttgttatcaaagaggctagaagaaggtcattgcagaggtgaaaacgggttcattttagatggaattcctcgtacaatgcttcaggctgaaatccttgacaaagttgtggacatagatttagttctgaatctcaagtgttccgtgtcaaagaatgatagaagcaatggaatttattcaactgaagatcaactccttaagagaggtaatttaatgtcttcaagggtcatggatggtggtgcctggaaagagaagcaatatgatcatgatgaacagatcaaacccttagaagaatattataggaagcagaaaaagctcctcaattatcaagtagcaggagggcctgctgaaacttggcaaggccttttggctgcattgcaacttcagcacatgatgagtgcagttggttcaacacagttgactgcaggatgctgatacgattctcctgtgttactttattctttttgcaagtatattatgtgcaggtgatatgagtgtatccatatcagttttgaccggcaatgtatagctaggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="2167" stop="172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1867" g_stop="1591" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="277" r_length="277" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1590" i_stop="1524" i_length="67">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1523" g_stop="1383" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="418" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1382" i_stop="1292" i_length="91">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1291" g_stop="1106" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="604" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="1105" i_stop="730" i_length="376">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.871" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="729" g_stop="472" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="863" r_length="259" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U584781" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>862</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1867" e_stop="1591"/>
          <exon e_start="1523" e_stop="1383"/>
          <exon e_start="1291" e_stop="1106"/>
          <exon e_start="729" e_stop="472"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCGGAGTTTCCGCCCGAACATTTCTTCGGGCTGCTTCAAGCAAGTCGGTTCGGGCCTACGGTTCAGCTGTTGCAGCTCACTTTGATTACGACAATGAGGAGGATATGGAGGAACCATCAGGATCAGTTCCACGCAGAGGAGTACAGTGGCTGATCATGGGTCATCCAATGACGCAGAGACACGTGTACGCCCAATGGCTGTCCAAACTTATGGACGTTCCATATATTTCCATGGGCTCTCTCGTACCTCAACAACTCAACCCTCACTATAACAAGGTATTTATTTATCTTTTAACAATATGACCAATATGCTTTTATTGAAATAATTTATGGTTGTATGAAGATATCAAGTGTTGTGAATGAGGGAAAGCATGTTCCAGAAGAAGTTATTTTTGGTTTGTTATCAAAGAGGCTAGAAGAAGGTCATTGCAGAGGTGAAAACGGGTTCATTTTAGATGGAATTCCTCGTACAATGCTTCAGGCTGTATGTATACCTCTCCCTCCTCACTTAAGGAAGGGCTCTTCATTTTTCTCATGAAAAATTGAGTCGGTTTTTCTGATATATCTTTATGTAGGAAATCCTTGACAAAGTTGTGGACATAGATTTAGTTCTGAATCTCAAGTGTTCCGTGTCAAAGAATGATAGAAGCAATGGAATTTATTCAACTGAAGATCAACTCCTTAAGAGAGGTAATTTAATGTCTTCAAGGGTCATGGATGGTGGTGCCTGGAAAGAGAAGCAATATGATCATGATGAACAGGTATCTGTCTGACATATTGTAAATTTTACAAGTTAACAATAACAGTAGCCAAGAAAACATTTGAGATTGCCTAGCAGTTCTGTTACTGTAAATATATGAACAAAAGATTTGTCACAAAAATTAAAAGCGTTCATGATCATCCATAGTTGGACTAATCATGCTGAAGAGTTTATATCACAATGTCAAAAGATATATCTCAAACCACTCAATTCAATATGCTTTCACATTTACTCTCTGCATGTGCTTCACAGATGATGAGCTTTATATATCTTAGTATGATTGTCACCATCTTGATGCAGAATCATTACTCATTGTTTTCTCAGTTGAACTACAAAGGCAACTAATACATGTTATTGTTCTGTATATTATTTTGAAGATCAAACCCTTAGAAGAATATTATAGGAAGCAGAAAAAGCTCCTCAATTATCAAGTAGCAGGAGGGCCTGCTGAAACTTGGCAAGGCCTTTTGGCTGCATTGCAACTTCAGCACATGATGAGTGCAGTTGGTTCAACACAGTTGACTGCAGGATGCTGATACGATTCTCCTGTGTTACTTAATTCTTTTTGCAAGTATATTATGTGCA-GTGATATGAGTGTATCAATATCAGTTTTGACCGGCAATGTATAGCTAGTT</genome_strand>
        <mrna_strand>CATGGGAGTTTCCGCCCGAACATTTCTTCGGGCTGCTTCAAGCAAGTCGGTTCGGGCCTACGGTTCAGCTGTTGCAGCTCACTTTGATTACGACAATGAGGAGGATATGGAGGAACCATCAGGATCAGTTCCACGCAGAGGAGTACAGTGGCTGATCATGGGTCATCCAATGACGCAGAGACACGTGTACGCCCAATGGCTGTCCAAACTTATGGACGTTCCATATATTTCCATGGGCTCTCTCGTACCTCAACAACTCAACCCTCACTATAACAAG...................................................................ATATCAAGTGTTGTGAATGAGGGAAAGCATGTTCCAGAAGAAGTTATTTTTGGTTTGTTATCAAAGAGGCTAGAAGAAGGTCATTGCAGAGGTGAAAACGGGTTCATTTTAGATGGAATTCCTCGTACAATGCTTCAGGCT...........................................................................................GAAATCCTTGACAAAGTTGTGGACATAGATTTAGTTCTGAATCTCAAGTGTTCCGTGTCAAAGAATGATAGAAGCAATGGAATTTATTCAACTGAAGATCAACTCCTTAAGAGAGGTAATTTAATGTCTTCAAGGGTCATGGATGGTGGTGCCTGGAAAGAGAAGCAATATGATCATGATGAACAG........................................................................................................................................................................................................................................................................................................................................................................................ATCAAACCCTTAGAAGAATATTATAGGAAGCAGAAAAAGCTCCTCAATTATCAAGTAGCAGGAGGGCCTGCTGAAACTTGGCAAGGCCTTTTGGCTGCATTGCAACTTCAGCACATGATGAGTGCAGTTGGTTCAACACAGTTGACTGCAGGATGCTGATACGATTCTCCTGTGTTACTTTATTCTTTTTGCAAGTATATTATGTGCAGGTGATATGAGTGTATCCATATCAGTTTTGACCGGCAATGTATAGCTAGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566130" ref_strand="+" ref_description="SGN-U566130 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157345289|emb|CAO14587.1| (e_value=2e-40) unnamed; (*ATH) AT1G76650.1 (e_value=2e-34)  Symbol: None | calcium-binding EF hand family protein, similar to regulator of gene silencing calmodulin-related protein GI:12963415 from (Nicotiana tabacum); contains INTERPRO:IPR002048 calcium-binding EF-hand domain | chr1:28771644-28772411 REVERS... ; (*SWP) sp|Q8RYJ8|CML19_ORYSJ (e_value=5e-36) Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19; ">
      <seq>cggccggggaccaaaacatcatatttcttcatggcggaatacaaacagcaccaacgcctatttgaccgttttgatgagaacagagacgggaaaatatctgccgaggagcttcaacagtgtgtgcatttgattggcaaagacatgtcatatgaggaagcaaaggctgctgttgagcataatgattcagacaatgatggcttgttggattttgaagattttgtgagattaattgaaggtggaagtgaagaagagaaggcgcacgagttgaaggaggcgttcaagatgtatgaaatggaagggtgtggatgcataacgcctgagagtttgaatagaatgctttctagattgggagaatcaacaacaattgatgaatgcagaggaatgatttgccgctatgatattgatggcgatggtctccttaattttcatgagtttgagatcatgatgcgttgctagtactcgtcactcaactaatacttattactatctctatctcataaagtgatcactcttcagttaagacacctagttgctactttgtctcattgttttgtttctgctttatttgattctttcagtctttaattggttgatcactcattctttctgtatattctctaaaaccaggttacatatgtttatttgtaatttctccattagtacccatattttgtgctttacatgtttgtaacactactactatgattaatgatctgtaatatatgtttcattttacctttggggtgtcctttgattcnacaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="3098" stop="4453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3402" g_stop="4153" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="763" r_length="752" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U566130" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3402" e_stop="4153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACATCATATTTCTTCATGGCGGAATACAAACAGCACCAACGCCTATTTGACCGTTTTGATGAGAACAGAGACGGGAAAATATCTGCCGAGGAGCTTCAACAGTGTGTGCATTTGATTGGCAAAGACATGTCATATGAGGAAGCAAAGGCTGCTGTTGAGCATAATGATTCAGACAATGATGGCTTGTTGGATTTTGAAGATTTTGTGAGATTAATTGAAGGTGGAAGTGAAGAAGAGAAGGCGCACGAGTTGAAGGAGGCGTTCAAGATGTATGAAATGGAAGGGTGTGGATGCATAACGCCTGAGAGTTTGAATAGAATGCTTTCTAGATTGGGAGAATCAACAACAATTGATGAATGCAGAGGAATGATTTGCCGCTATGATATTGATGGCGATGGTCTCCTTAATTTTCATGAGTTTGAGATCATGATGCGTTGCTAGTACTCGTCACTCAACTAATACTTATTACTATCTCTATCTCATAAAGTGATCACTCTTCAGTTAAGACACCTAGTTGCTACTTTGTCTCATTGTTTTGTTTCTGCTTTATTTGATTCTTTCAGTCTTTAATTGGTTGATCACTCATTCTTTCTGTATATTCTCTAAAACCAGGTTACATATGTTTATTTGTAATTTCTCCATTAGTACCCATATTTTGTGCTTTACATGTTTGTAACACTACTACTATGATTAATGATCTGTAATATATGTTTCATTTTACCTTTGGGGTGTCCTTTGATTCAACAAC</genome_strand>
        <mrna_strand>CAAAACATCATATTTCTTCATGGCGGAATACAAACAGCACCAACGCCTATTTGACCGTTTTGATGAGAACAGAGACGGGAAAATATCTGCCGAGGAGCTTCAACAGTGTGTGCATTTGATTGGCAAAGACATGTCATATGAGGAAGCAAAGGCTGCTGTTGAGCATAATGATTCAGACAATGATGGCTTGTTGGATTTTGAAGATTTTGTGAGATTAATTGAAGGTGGAAGTGAAGAAGAGAAGGCGCACGAGTTGAAGGAGGCGTTCAAGATGTATGAAATGGAAGGGTGTGGATGCATAACGCCTGAGAGTTTGAATAGAATGCTTTCTAGATTGGGAGAATCAACAACAATTGATGAATGCAGAGGAATGATTTGCCGCTATGATATTGATGGCGATGGTCTCCTTAATTTTCATGAGTTTGAGATCATGATGCGTTGCTAGTACTCGTCACTCAACTAATACTTATTACTATCTCTATCTCATAAAGTGATCACTCTTCAGTTAAGACACCTAGTTGCTACTTTGTCTCATTGTTTTGTTTCTGCTTTATTTGATTCTTTCAGTCTTTAATTGGTTGATCACTCATTCTTTCTGTATATTCTCTAAAACCAGGTTACATATGTTTATTTGTAATTTCTCCATTAGTACCCATATTTTGTGCTTTACATGTTTGTAACACTACTACTATGATTAATGATCTGTAATATATGTTTCATTTTACCTTTGGGGTGTCCTTTGATTCNACAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571684" ref_strand="+" ref_description="SGN-U571684 Tomato 200607#2 [30 ESTs aligned] (*GB) gi|147775614|emb|CAN62725.1| (e_value=2e-34) hypothetical; (*ATH) AT3G27210.1 (e_value=2e-19) | Symbol: None | expressed protein | chr3:10046423-10048580 REVERSE | Aliases: K17E12.3; (*SWP) sp|Q9LK32|Y3721_ARATH (e_value=1e-18) Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2; ">
      <seq>aaccttttaagataggaccctcccattttctccattacgaattacaataattttggtattgaaagccccacaattttcctatgatattttgctctccactctgttctgttctgctatcgggcatttcaacaatttgtcccttctttgccgaagcgtagcgctcccttttactgcattttctcctacgactttcatctaggttcttagaggcatctcggtggtacaaatcaagtgttttctgttagcaatgggttcatctgcttcagtgcataaagatccgaaatcagcaatgaagctccgttttgtctttgcatctaaatctgacaagcttgtgagtccctcacctatcaaagataaaccccttgatactgctgaaatcaaactctctcttcctcaaatcaaacctcagcgttccccggtgctcccgcttaacagttttagcgactatggtagcaaggaggaggccttttttgattcccaggcctggttggagtcagattgtgatgatgacttctttagtgtcaagggagattttacaccatcacttggaaatactccttcgtgtggaaatacacctgtgcatcgaggtttgttggtcggtaatctgctaggtaatcgagcctcttttggagaaagaacttctgcttctataccgcaatcttctccaatacacaagaggaagaatttacttgagcttttcaaagaaagctcaagaaaccggaacccgaatgagcatggtgctgaagacaacgaaaatatacaggcagctggtctacagctaccacctaaatccacatttagcacacctcatgtgccggtgtctagtggcaagagcacccctgtaggaaagtacaaaagtgaggcaaaatcgctgaggtcagtacaatgttgtcttcccaggttgagtggcagttttagggaaaagaggaagagtatgagtcctgcaaataccgtgggctaatagctagaactcggctttcataagttctctatgtatgtatatgctagtgcacaaggaattgtgcatctattgagctttgcactttgaccctcagtaacttgagggccgtgagatgaggtgtgcattggcacacacttactgtgtataaattaaacttataaagaacagctttgttaataaattaacaaggtcgtattctgttaatgtatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="19993" stop="23554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20293" g_stop="20741" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20742" i_stop="22191" i_length="1450">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22192" g_stop="22272" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="530" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22273" i_stop="22611" i_length="339">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22612" g_stop="23254" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="1173" r_length="643" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U571684" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1173</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20293" e_stop="20741"/>
          <exon e_start="22192" e_stop="22272"/>
          <exon e_start="22612" e_stop="23254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCTTTTAAGATAGGACCCACCCATTTTCTCCATTACAAATTACGATAATTTTGGTATTGAAAGCCCCACAATTTTCCTATGATATTTTGCTCTCCACTCTGTTCTGTTCTGCTATCGGGCATTTCAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATGGTACCATCTTCTTCTTTTCAATTCCTGTCCGATTATTCAGTTTGTTTTTATGTTTATTTGACGTTGATTTCACTTTATGTTCGACGCTTTTGTGTGGGGTTTCTCGTGATGAGAAAAAAAAAGAGGAGGAAAATTGATGCTTTTCATGTGAAACACTTTTTTTTCAGTTTCAAATTTTGAGTTAGTCTGATGTTGGATTACTAGTTTCTTCTATTTGCTAAGGAAATTGGTTGTTCTACAGAAATTTTATCTAATGTTTAAGAAAATTGTAGAGATGTTCTGTTTATCTGAAAGGCATGATTAACAGGTTGATGGTCTTCCAACTAATAGTTCCTTTGTTGGATAATAACTATTTGTTGAATGAACTTTAACTCCATCACTAACACAATTCCTGTTCAAAATTGTCTTCTTATGAAACTTAGAAAATTACAATTTTAATGACTTAAGTGTGTTCTTCTTATTATTTTTTTGTTTGCTGTCTATTCCTTTGTGCCATTAGGTAAGATTGACTGACGAGCTACTGTTAAAATCATGTGCAATGCCAAAATTCTCTTATTGGTGGGGTCATTTGCAGCACATGTTGTGGCACTACGACCTTTCAAAAAAAAAGAAAGAAAGAAAGAAAGAGACACCCTGTAGCTTAATGTGAATAATTCAATAGAAGAGTCATTTTCAATATTCTTTATATTCAACCCAGATGTATTTGTCAATATAAAAATGGATGTATAATATAAGTGTAATCCATGTACATTTAGTGTAAAAAGTAAACAGTGAAATACAGGCTAAAGACACCGTTTTACAGGGAAAATGGCTTCCTTGTTTCATTTCATCATCTGTGCAAGCAGCTGTAACCTTAGTTGAGATTTGCACGTTTAATTCAGCGACTTTTCTTGTTTCATAATCCTTGTCAATTGTGTTACATGTAATTTTCCTCTTGTCATGTGGTTTTGTTACAACAGTCAGGGGATCCTTCATTGACTTCTTTCAAAGCAATCCGACGAATCATCTTGTTTTCTATGATATTTATGTGGTAATAGCACTCTCTAGTCAAAATAAGTTTCTTCTGTGTATTTTATGCCATTGACAAAATGTAGTGCAGTTTTTTACTGTAAAGACTTAACTAATGCCTACTAGTTTAGTTTTCTCAGAAGTGTCTAACTAGTTCTGTTTCTTGTTTATTTTTTTATATGGGTGAATTTGTTTTGAATGTGATGTGTTGGGATTGTGGTGGAATAATGGTGAAAACGACATGCTCTATGCTTTCTTTCAGTTTCTTCTTTCGTTTCCCTTGTATCCTCAAACTGATTTCATGAAGCAGAGCCCACATTGTGAAGCTTTCAATATATTTTTAATTGAATTATGTTCATGTTATTGTGCATTTGTCATTGTTACTAGTATTCTCATGATACATTTTATCGTTTCTAATAGCCTAAGGCATTCTTTTGTTTAGGTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAGGTGAGACAGAACTTTGATACCTGATGCTCTTTCCATATTCTCCGTTCATCTTTCTTCTCATGTTATTATAGTCATAAAATTGAAAATGGCTATTATGCATTCAACTGAATCATTAGTAATGACTGCTAAGGCAATTTGAGAAGACCAGATCTAGAAAATCAGGTATTGGAAGTACCTGACCTTTTTGTTCAAGAAAAGTGCCACACCAGTGCGTAGTTTTTGCTAAAATAGGGATCTAAGTGTCAGGAACACTTTTTATTCTTGTTGTGAGTAGCCACCTTCAATTTACACTTGCAATCATTATCATTAATTCTTGTAGTCTATCTGTCTTCAATGCAGATTTTACACCATCACTTGGAAATACTCCTTCGTGTGGAAATACACCTGTGCATCGAGGTTTGTTGGTCGGTAATCTGCTAGGTAATCGAGCCTCTTTTGGAGAAAGAACTTCTGCTTCTATACCGCAATCTTCTCCAATACACAAGAGGAAGAATTTACTTGAGCTTTTCAAAGAAAGCTCAAGAAACCGGAACCCGAATGAGCATGGTGCTGAAGACAACGAAAATATACAGGCAGCTGGTCTACAGCTACCACCTAAATCCACATTTAGCACACCTCATGTGCCGGTGTCTAGTGGCAAGAGCACCCCTGTAGGAAAGTACAAAAGTGAGGCAAAATCGCTGAGGTCAGTACAATGTTGTCTTCCCAGGTTGAGTGGCAGTTTTAGGGAAAAGAGGAAGAGTATGAGTCCTGCAAATACCGTGGGCTAATAGCTAGAACTCGGCTTTCATAAGTTCTCTATGTATGTATATGCTAGTGCACAAGGAATTGTGCATCTATTGAGCTTTGCACTTTGACCCTCAGTAACTTGAGGGCCGTGAGATGAGGTGTGCATTGGCACACACTTACTGTGTATAAATTAAACTTATAAAGAACAGCTTTGTTAATAAATTAACAAGGTCGTATTCTGTTAATGTATATG</genome_strand>
        <mrna_strand>AACCTTTTAAGATAGGACCCTCCCATTTTCTCCATTACGAATTACAATAATTTTGGTATTGAAAGCCCCACAATTTTCCTATGATATTTTGCTCTCCACTCTGTTCTGTTCTGCTATCGGGCATTTCAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAG...................................................................................................................................................................................................................................................................................................................................................ATTTTACACCATCACTTGGAAATACTCCTTCGTGTGGAAATACACCTGTGCATCGAGGTTTGTTGGTCGGTAATCTGCTAGGTAATCGAGCCTCTTTTGGAGAAAGAACTTCTGCTTCTATACCGCAATCTTCTCCAATACACAAGAGGAAGAATTTACTTGAGCTTTTCAAAGAAAGCTCAAGAAACCGGAACCCGAATGAGCATGGTGCTGAAGACAACGAAAATATACAGGCAGCTGGTCTACAGCTACCACCTAAATCCACATTTAGCACACCTCATGTGCCGGTGTCTAGTGGCAAGAGCACCCCTGTAGGAAAGTACAAAAGTGAGGCAAAATCGCTGAGGTCAGTACAATGTTGTCTTCCCAGGTTGAGTGGCAGTTTTAGGGAAAAGAGGAAGAGTATGAGTCCTGCAAATACCGTGGGCTAATAGCTAGAACTCGGCTTTCATAAGTTCTCTATGTATGTATATGCTAGTGCACAAGGAATTGTGCATCTATTGAGCTTTGCACTTTGACCCTCAGTAACTTGAGGGCCGTGAGATGAGGTGTGCATTGGCACACACTTACTGTGTATAAATTAAACTTATAAAGAACAGCTTTGTTAATAAATTAACAAGGTCGTATTCTGTTAATGTATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596552" ref_strand="+" ref_description="SGN-U596552 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147775614|emb|CAN62725.1| (e_value=7e-20) hypothetical; ">
      <seq>acnattttcctatgatattttgctctcnactctgttctgttctgctatcgggcatttcaacaatttgtcccttctttgccgaagcgtagcgctcccttttactgcattttctcctacgactttcatctaggttcttagaggcatctcggtggtacaaatcaagtgttttctgttagcaatgggttcatctgcttcagtgcataaagatccgaaatcagcaatgaagctccgttttgtctttgcatctaaatctgacaagcttgtgagtccctcacctatcaaagataaaccccttgatactgctgaaatcaaactctctcttcctcaaatcaaacctcagcgttccccggtgctcccgcttaacagttttagcgactatggtagcaaggaggaggccttttttgattcccaggcctggttggagtcagattgtgatgatgacttctttagtgtcaagggaggtgagacagaactttgatacctgatgctctttccatattctccgttcatctttcttctcatgttattatagtcataaaattgaaaatggctatnatgcattcaactgaatcattagtaatgactgctaangcaatttgagaagaccagatctagaaaatcnngtattggaagtacctganctttttgttcaanaaaagtgccacaccagngcgtagtttttgctaaaatagggatctaagtgtcngnanactttttattcnngnngngagtagccancntcantttacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="20062" stop="22829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20362" g_stop="20741" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20742" i_stop="22191" i_length="1450">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22192" g_stop="22564" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="752" r_length="372" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U596552" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596552" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20362" e_stop="20741"/>
          <exon e_start="22192" e_stop="22564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATTTTCCTATGATATTTTGCTCTCCACTCTGTTCTGTTCTGCTATCGGGCATTTCAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATGGTACCATCTTCTTCTTTTCAATTCCTGTCCGATTATTCAGTTTGTTTTTATGTTTATTTGACGTTGATTTCACTTTATGTTCGACGCTTTTGTGTGGGGTTTCTCGTGATGAGAAAAAAAAAGAGGAGGAAAATTGATGCTTTTCATGTGAAACACTTTTTTTTCAGTTTCAAATTTTGAGTTAGTCTGATGTTGGATTACTAGTTTCTTCTATTTGCTAAGGAAATTGGTTGTTCTACAGAAATTTTATCTAATGTTTAAGAAAATTGTAGAGATGTTCTGTTTATCTGAAAGGCATGATTAACAGGTTGATGGTCTTCCAACTAATAGTTCCTTTGTTGGATAATAACTATTTGTTGAATGAACTTTAACTCCATCACTAACACAATTCCTGTTCAAAATTGTCTTCTTATGAAACTTAGAAAATTACAATTTTAATGACTTAAGTGTGTTCTTCTTATTATTTTTTTGTTTGCTGTCTATTCCTTTGTGCCATTAGGTAAGATTGACTGACGAGCTACTGTTAAAATCATGTGCAATGCCAAAATTCTCTTATTGGTGGGGTCATTTGCAGCACATGTTGTGGCACTACGACCTTTCAAAAAAAAAGAAAGAAAGAAAGAAAGAGACACCCTGTAGCTTAATGTGAATAATTCAATAGAAGAGTCATTTTCAATATTCTTTATATTCAACCCAGATGTATTTGTCAATATAAAAATGGATGTATAATATAAGTGTAATCCATGTACATTTAGTGTAAAAAGTAAACAGTGAAATACAGGCTAAAGACACCGTTTTACAGGGAAAATGGCTTCCTTGTTTCATTTCATCATCTGTGCAAGCAGCTGTAACCTTAGTTGAGATTTGCACGTTTAATTCAGCGACTTTTCTTGTTTCATAATCCTTGTCAATTGTGTTACATGTAATTTTCCTCTTGTCATGTGGTTTTGTTACAACAGTCAGGGGATCCTTCATTGACTTCTTTCAAAGCAATCCGACGAATCATCTTGTTTTCTATGATATTTATGTGGTAATAGCACTCTCTAGTCAAAATAAGTTTCTTCTGTGTATTTTATGCCATTGACAAAATGTAGTGCAGTTTTTTACTGTAAAGACTTAACTAATGCCTACTAGTTTAGTTTTCTCAGAAGTGTCTAACTAGTTCTGTTTCTTGTTTATTTTTTTATATGGGTGAATTTGTTTTGAATGTGATGTGTTGGGATTGTGGTGGAATAATGGTGAAAACGACATGCTCTATGCTTTCTTTCAGTTTCTTCTTTCGTTTCCCTTGTATCCTCAAACTGATTTCATGAAGCAGAGCCCACATTGTGAAGCTTTCAATATATTTTTAATTGAATTATGTTCATGTTATTGTGCATTTGTCATTGTTACTAGTATTCTCATGATACATTTTATCGTTTCTAATAGCCTAAGGCATTCTTTTGTTTAGGTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAGGTGAGACAGAACTTTGATACCTGATGCTCTTTCCATATTCTCCGTTCATCTTTCTTCTCATGTTATTATAGTCATAAAATTGAAAATGGCTATTATGCATTCAACTGAATCATTAGTAATGACTGCTAAGGCAATTTGAGAAGACCAGATCTAGAAAATCAGGTATTGGAAGTACCTGACCTTTTTGTTCAAGAAAAGTGCCACACCAGTGCGTAGTTTTTGCTAAAATAGGGATCTAAGTGTCAGGAACACTTTTTATTCTTGTTGTGAGTAGCCACCTTCAATTTACACT</genome_strand>
        <mrna_strand>ACNATTTTCCTATGATATTTTGCTCTCNACTCTGTTCTGTTCTGCTATCGGGCATTTCAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAGGTGAGACAGAACTTTGATACCTGATGCTCTTTCCATATTCTCCGTTCATCTTTCTTCTCATGTTATTATAGTCATAAAATTGAAAATGGCTATNATGCATTCAACTGAATCATTAGTAATGACTGCTAANGCAATTTGAGAAGACCAGATCTAGAAAATCNNGTATTGGAAGTACCTGANCTTTTTGTTCAANAAAAGTGCCACACCAGNGCGTAGTTTTTGCTAAAATAGGGATCTAAGTGTC-NGNANACTTTTTATTCNNGNNGNGAGTAGCCANCNTCANTTTACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596550" ref_strand="+" ref_description="SGN-U596550 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147775614|emb|CAN62725.1| (e_value=3e-27) hypothetical; (*ATH) AT3G27210.1 (e_value=1e-11) | Symbol: None | expressed protein | chr3:10046423-10048580 REVERSE | Aliases: K17E12.3; ">
      <seq>caacaatttgtcccttctttgccgaagcgtagcgctcccttttactgcattttctcctacgactttcatctaggttcttagaggcatctcggtggtacaaatcaagtgttttctgttagcaatgggttcatctgcttcagtgcataaagatccgaaatcagcaatgaagctccgttttgtctttgcatctaaatctgacaagcttgtgagtccctcacctatcaaagataaaccccttgatactgctgaaatcaaactctctcttcctcaaatcaaacctcagcgttccccggtgctcccgcttaacagttttagcgactatggtagcaaggaggaggccttttttgattcccaggcctggttggagtcagattgtgatgatgacttctttagtgtcaagggagtctatctgtcttcaatgcagattttacaccatcacttggaaatactccttcgtgtggaaatacacctgtgcatcgaggtttgttggtcggtaatctgctaggtaatcgagcctcttttggagaaagaacttctgcttctataccgcaatcttctccaatacacaagaagaagaatttacttgagcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="20119" stop="23079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20419" g_stop="20741" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20742" i_stop="22191" i_length="1450">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22192" g_stop="22272" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="404" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22273" i_stop="22591" i_length="319">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22592" g_stop="22779" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="592" r_length="188" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U596550" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20419" e_stop="20741"/>
          <exon e_start="22192" e_stop="22272"/>
          <exon e_start="22592" e_stop="22779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATGGTACCATCTTCTTCTTTTCAATTCCTGTCCGATTATTCAGTTTGTTTTTATGTTTATTTGACGTTGATTTCACTTTATGTTCGACGCTTTTGTGTGGGGTTTCTCGTGATGAGAAAAAAAAAGAGGAGGAAAATTGATGCTTTTCATGTGAAACACTTTTTTTTCAGTTTCAAATTTTGAGTTAGTCTGATGTTGGATTACTAGTTTCTTCTATTTGCTAAGGAAATTGGTTGTTCTACAGAAATTTTATCTAATGTTTAAGAAAATTGTAGAGATGTTCTGTTTATCTGAAAGGCATGATTAACAGGTTGATGGTCTTCCAACTAATAGTTCCTTTGTTGGATAATAACTATTTGTTGAATGAACTTTAACTCCATCACTAACACAATTCCTGTTCAAAATTGTCTTCTTATGAAACTTAGAAAATTACAATTTTAATGACTTAAGTGTGTTCTTCTTATTATTTTTTTGTTTGCTGTCTATTCCTTTGTGCCATTAGGTAAGATTGACTGACGAGCTACTGTTAAAATCATGTGCAATGCCAAAATTCTCTTATTGGTGGGGTCATTTGCAGCACATGTTGTGGCACTACGACCTTTCAAAAAAAAAGAAAGAAAGAAAGAAAGAGACACCCTGTAGCTTAATGTGAATAATTCAATAGAAGAGTCATTTTCAATATTCTTTATATTCAACCCAGATGTATTTGTCAATATAAAAATGGATGTATAATATAAGTGTAATCCATGTACATTTAGTGTAAAAAGTAAACAGTGAAATACAGGCTAAAGACACCGTTTTACAGGGAAAATGGCTTCCTTGTTTCATTTCATCATCTGTGCAAGCAGCTGTAACCTTAGTTGAGATTTGCACGTTTAATTCAGCGACTTTTCTTGTTTCATAATCCTTGTCAATTGTGTTACATGTAATTTTCCTCTTGTCATGTGGTTTTGTTACAACAGTCAGGGGATCCTTCATTGACTTCTTTCAAAGCAATCCGACGAATCATCTTGTTTTCTATGATATTTATGTGGTAATAGCACTCTCTAGTCAAAATAAGTTTCTTCTGTGTATTTTATGCCATTGACAAAATGTAGTGCAGTTTTTTACTGTAAAGACTTAACTAATGCCTACTAGTTTAGTTTTCTCAGAAGTGTCTAACTAGTTCTGTTTCTTGTTTATTTTTTTATATGGGTGAATTTGTTTTGAATGTGATGTGTTGGGATTGTGGTGGAATAATGGTGAAAACGACATGCTCTATGCTTTCTTTCAGTTTCTTCTTTCGTTTCCCTTGTATCCTCAAACTGATTTCATGAAGCAGAGCCCACATTGTGAAGCTTTCAATATATTTTTAATTGAATTATGTTCATGTTATTGTGCATTTGTCATTGTTACTAGTATTCTCATGATACATTTTATCGTTTCTAATAGCCTAAGGCATTCTTTTGTTTAGGTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAGGTGAGACAGAACTTTGATACCTGATGCTCTTTCCATATTCTCCGTTCATCTTTCTTCTCATGTTATTATAGTCATAAAATTGAAAATGGCTATTATGCATTCAACTGAATCATTAGTAATGACTGCTAAGGCAATTTGAGAAGACCAGATCTAGAAAATCAGGTATTGGAAGTACCTGACCTTTTTGTTCAAGAAAAGTGCCACACCAGTGCGTAGTTTTTGCTAAAATAGGGATCTAAGTGTCAGGAACACTTTTTATTCTTGTTGTGAGTAGCCACCTTCAATTTACACTTGCAATCATTATCATTAATTCTTGTAGTCTATCTGTCTTCAATGCAGATTTTACACCATCACTTGGAAATACTCCTTCGTGTGGAAATACACCTGTGCATCGAGGTTTGTTGGTCGGTAATCTGCTAGGTAATCGAGCCTCTTTTGGAGAAAGAACTTCTGCTTCTATACCGCAATCTTCTCCAATACACAAGAGGAAGAATTTACTTGAGCTTT</genome_strand>
        <mrna_strand>CAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAG...............................................................................................................................................................................................................................................................................................................................TCTATCTGTCTTCAATGCAGATTTTACACCATCACTTGGAAATACTCCTTCGTGTGGAAATACACCTGTGCATCGAGGTTTGTTGGTCGGTAATCTGCTAGGTAATCGAGCCTCTTTTGGAGAAAGAACTTCTGCTTCTATACCGCAATCTTCTCCAATACACAAGAAGAAGAATTTACTTGAGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596549" ref_strand="+" ref_description="SGN-U596549 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aacaatttgtcccttctttgccgaagcgtagcgctcccttttactgcattttctcctacgactttcatctaggttcttagaggcatctcggtggtacaaatcaagtgttttctgttagcaatgggttcatctgcttcagtgcataaagatccgaaatcagcaatgaagctccgttttgtctttgcatctaaatctgacaagcttgtgagtccctcacctatcaaagataaaccccttgatactgctgaaatcaaactctctcttcctcaaatcaaacctcagcgttccccggtgctcccgcttaacagttttagcgactatggtaagattgactgacgagctactgttaaaatcatgtgcaatgccaaaattctcttattggtggggtcatttgcagcacatgttgtggcactacgacctttcaaaaaaaaagaaagaaagaaagaaagagacaccctgtagcttantgtgaataattcaatagaagagtcattttcaatattctttatattcaacccagatgtatttgtcaatataaaaatggatgtataatataagtgtaatccatgtacatttagtgtaaaaagtaaacagtgaaatacaggctaaagacaccgttttacagggaaaatggcttcctngtttcatttcatcatctgtgcaagcagctgtaaccttanttgananttgcacgtttanntcnncgacttttctngnttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="20120" stop="21939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20420" g_stop="20741" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20742" i_stop="21240" i_length="499">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21241" g_stop="21639" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="721" r_length="399" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U596549" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20420" e_stop="20741"/>
          <exon e_start="21241" e_stop="21639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATGGTACCATCTTCTTCTTTTCAATTCCTGTCCGATTATTCAGTTTGTTTTTATGTTTATTTGACGTTGATTTCACTTTATGTTCGACGCTTTTGTGTGGGGTTTCTCGTGATGAGAAAAAAAAAGAGGAGGAAAATTGATGCTTTTCATGTGAAACACTTTTTTTTCAGTTTCAAATTTTGAGTTAGTCTGATGTTGGATTACTAGTTTCTTCTATTTGCTAAGGAAATTGGTTGTTCTACAGAAATTTTATCTAATGTTTAAGAAAATTGTAGAGATGTTCTGTTTATCTGAAAGGCATGATTAACAGGTTGATGGTCTTCCAACTAATAGTTCCTTTGTTGGATAATAACTATTTGTTGAATGAACTTTAACTCCATCACTAACACAATTCCTGTTCAAAATTGTCTTCTTATGAAACTTAGAAAATTACAATTTTAATGACTTAAGTGTGTTCTTCTTATTATTTTTTTGTTTGCTGTCTATTCCTTTGTGCCATTAGGTAAGATTGACTGACGAGCTACTGTTAAAATCATGTGCAATGCCAAAATTCTCTTATTGGTGGGGTCATTTGCAGCACATGTTGTGGCACTACGACCTTTCAAAAAAAAAGAAAGAAAGAAAGAAAGAGACACCCTGTAGCTTAATGTGAATAATTCAATAGAAGAGTCATTTTCAATATTCTTTATATTCAACCCAGATGTATTTGTCAATATAAAAATGGATGTATAATATAAGTGTAATCCATGTACATTTAGTGTAAAAAGTAAACAGTGAAATACAGGCTAAAGACACCGTTTTACAGGGAAAATGGCTTCCTTGTTTCATTTCATCATCTGTGCAAGCAGCTGTAACCTTAGTTGAGATTTGCACGTTTAATTCAGCGACTTTTCTTGTTTCA</genome_strand>
        <mrna_strand>AACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGATTGACTGACGAGCTACTGTTAAAATCATGTGCAATGCCAAAATTCTCTTATTGGTGGGGTCATTTGCAGCACATGTTGTGGCACTACGACCTTTCAAAAAAAAAGAAAGAAAGAAAGAAAGAGACACCCTGTAGCTTANTGTGAATAATTCAATAGAAGAGTCATTTTCAATATTCTTTATATTCAACCCAGATGTATTTGTCAATATAAAAATGGATGTATAATATAAGTGTAATCCATGTACATTTAGTGTAAAAAGTAAACAGTGAAATACAGGCTAAAGACACCGTTTTACAGGGAAAATGGCTTCCTNGTTTCATTTCATCATCTGTGCAAGCAGCTGTAACCTTANTTGANANTTGCACGTTTANNTCNNCGACTTTTCTNGNTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573041" ref_strand="+" ref_description="SGN-U573041 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345283|emb|CAO14581.1| (e_value=3e-43) unnamed; (*ATH) AT3G27200.1 (e_value=1e-39) | Symbol: None | plastocyanin-like domain-containing protein, contains similarity to uclacyanin I GI:3399767 GB:AAC32038 from (Arabidopsis thaliana) | chr3:10044759-10045608 REVERSE | Aliases: K17E12.2; (*SWP) sp|Q41001|BCP_PEA (e_value=2e-19) Blue copper protein OS=Pisum sativum; ">
      <seq>ggggaagcattgaaggtcaggtttatcttaaaaaagaactagctagtacgtatctactaatatttgttaggcaaaattatcagtttgttaccaaaatggtgctagtacgcaaatctttgttgatatctgtcattgtgatggtaatgatccagaaaaatgcaatggccgctcaacacgttgttggtggaagccaaggatgggatgaatctgctgatttcaaatcctgggcttctggtcagacattcaaagttggtgatacactagtatttaggtacaatccaggccttcacagtgttgtagaacttgagggtgatagctcatacaagagttgtgatataagcagtacagtgaactcgatgagtgcgggtaatgatgtggttaaactaaacaagccagggactagatactttgcttgtggaacagcaggtcattgtgaccagggaatgaagcttaagattaaaactgttactggaaagtgcaccttctaatcaggaaaattcttccacccctcgctcttcttctgcagcttctcattggttttctaccccatttttcactttcattggtgcaattttgactgtacaaatggctctagtgttcctcttatagacacatttttgctttattgattcatgttttgcacttgatgaggcagagtagctggtattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="28335" stop="29828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28631" g_stop="28894" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28895" i_stop="29121" i_length="227">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29122" g_stop="29528" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="670" r_length="406" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U573041" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28631" e_stop="28894"/>
          <exon e_start="29122" e_stop="29528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTAAGCATTGAAGGTCAGGTTTATCTTAAAAAAGAACTAGCTAGTACGTATCTACTAATATTTGTTAGGCAAAATTATCAGTTTGTTACCAAAATGGTGCTAGTACGCAAATCTTTGTTGATATCTGTCATTGTGATGGTAATGATCCAGAAAAATGCAATGGCCGCTCAACACGTTGTTGGTGGAAGCCAAGGATGGGATGAATCTGCTGATTTCAAATCCTGGGCTTCTGGTCAGACATTCAAAGTTGGTGATACACTAGGTTTGTTATTTATTTATTTCTTTTCTCTCCTTCAACCAAAAATTGGTAGAATCAAAGTTGTCAAACGGTTTTTATGTCAGAGTTGGGTTGTATTTTGACCGAATCGGGTTATATCTATTCAGCCCAATCCATTTAAACATGGGCGTGTTGGTCGAGTTAGCTAAAATGGATTAATTTTGTCACATCTAGTAAAATTTCTAAGATTTCACTATCTTGTTTTTTGGCAGTATTTAGGTACAATCCAGGCCTTCACAGTGTTGTAGAACTTGAGGGTGATAGCTCATACAAGAGTTGTGATATAAGCAGTACAGTGAACTCGATGAGTGCGGGTAATGATGTGGTTAAACTAAACAAGCCAGGGACTAGATACTTTGCTTGTGGAACAGCAGGTCATTGTGACCAGGGAATGAAGCTTAAGATTAAAACTGTTACTGG-AAGTGCACCTTCTAATCAGGAAGATTCTTCCACGCCTCGCTCTTCTTCTGCAGCTTCTCATTGTTTTTCTACCGCATTTTTCACTTTCATTGTTGCAATTTTGACTGTACAAATGGCTCTAGTGTTCCTCTTATAAGACACATTTTTGCTTTATTGATTCAATGTTTTGCACTTGATGAGGCAGAGTAGCTGGTATTTA</genome_strand>
        <mrna_strand>GGGGAAGCATTGAAGGTCAGGTTTATCTTAAAAAAGAACTAGCTAGTACGTATCTACTAATATTTGTTAGGCAAAATTATCAGTTTGTTACCAAAATGGTGCTAGTACGCAAATCTTTGTTGATATCTGTCATTGTGATGGTAATGATCCAGAAAAATGCAATGGCCGCTCAACACGTTGTTGGTGGAAGCCAAGGATGGGATGAATCTGCTGATTTCAAATCCTGGGCTTCTGGTCAGACATTCAAAGTTGGTGATACACTAG...................................................................................................................................................................................................................................TATTTAGGTACAATCCAGGCCTTCACAGTGTTGTAGAACTTGAGGGTGATAGCTCATACAAGAGTTGTGATATAAGCAGTACAGTGAACTCGATGAGTGCGGGTAATGATGTGGTTAAACTAAACAAGCCAGGGACTAGATACTTTGCTTGTGGAACAGCAGGTCATTGTGACCAGGGAATGAAGCTTAAGATTAAAACTGTTACTGGAAAGTGCACCTTCTAATCAGGAAAATTCTTCCACCCCTCGCTCTTCTTCTGCAGCTTCTCATTGGTTTTCTACCCCATTTTTCACTTTCATTGGTGCAATTTTGACTGTACAAATGGCTCTAGTGTTCCTCTTAT-AGACACATTTTTGCTTTATTGATTC-ATGTTTTGCACTTGATGAGGCAGAGTAGCTGGTATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598877" ref_strand="+" ref_description="SGN-U598877 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157341091|emb|CAO48998.1| (e_value=6e-52) unnamed; (*ATH) AT5G40890.2 (e_value=8e-51)  Symbol: None | similar to chloride channel protein (CLC-c) [Arabidopsis thaliana] (TAIR:At5g49890.1); similar to chloride channel-like (CLC) protein, putative [Arabidopsis thaliana] (TAIR:At5g33280.1); similar to chloride channel protein (CLC-b) [Ar... ; (*SWP) sp|P92941|CLCA_ARATH (e_value=7e-50) Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A; ">
      <seq>cagccatctggtctctatatcccaatcatcctcatgggttcaggttatggtcgcttgcttggcattgccatgagaccttatacaaaaattgatcaggagttgtttgctgttcttggagcagcttcccttatggctggttcaatgagaatgacagttactgtttgtgtcatatttcttgagctgacaaacaatctacttcttctgccgataacaatgcttgtccttctaattgctaaaattgttgcagactgcttcaacccaagtatctatgaaatggttttggaactaaaaggtctacctttcttggaagcacatccagaggcatggatgaggaatatcatagttggtgagctttctgatgtaaagtcaccagtagttactcttgagggaattgagaaagtgagacgaatcgtagaggttctaaagtacaccactcacaatggattccctgttgtagatggtgtgatacccgagttacatggacttgtcttaagaactcaccttcttttggtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="31144" stop="30032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30846" g_stop="30332" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U598877" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30846" e_stop="30332"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCCATCTGGTCTCTATATCCCAATCATCCTCATGGGTTCAGGTTATGGTCGCTTGCTTGGCATTGCCATGAGACCTTATACAAAAATTGATCAGGAGTTGTTTGCTGTTCTTGGAGCAGCTTCCCTTATGGCTGGTTCAATGAGAATGACAGTTACTGTTTGTGTCATATTTCTTGAGCTGACAAACAATCTACTTCTTCTGCCGATAACAATGCTTGTCCTTCTAATTGCTAAAATTGTTGCAGACTGCTTCAACCCAAGTATCTATGAAATGGTTTTGGAACTAAAAGGTCTACCTTTCTTGGAAGCACATCCAGAGGCATGGATGAGGAATATCATAGTTGGTGAGCTTTCTGATGTAAAGTCACCAGTAGTTACTCTTGAGGGAATTGAGAAAGTGAGACGAATCGTAGAGGTTCTAAAGTACACCACTCACAATGGATTCCCTGTTGTAGATGGTGTGATACCCGAGTTACATGGACTTGTCTTAAGAACTCACCTTCTTTTGGTGCT</genome_strand>
        <mrna_strand>CAGCCATCTGGTCTCTATATCCCAATCATCCTCATGGGTTCAGGTTATGGTCGCTTGCTTGGCATTGCCATGAGACCTTATACAAAAATTGATCAGGAGTTGTTTGCTGTTCTTGGAGCAGCTTCCCTTATGGCTGGTTCAATGAGAATGACAGTTACTGTTTGTGTCATATTTCTTGAGCTGACAAACAATCTACTTCTTCTGCCGATAACAATGCTTGTCCTTCTAATTGCTAAAATTGTTGCAGACTGCTTCAACCCAAGTATCTATGAAATGGTTTTGGAACTAAAAGGTCTACCTTTCTTGGAAGCACATCCAGAGGCATGGATGAGGAATATCATAGTTGGTGAGCTTTCTGATGTAAAGTCACCAGTAGTTACTCTTGAGGGAATTGAGAAAGTGAGACGAATCGTAGAGGTTCTAAAGTACACCACTCACAATGGATTCCCTGTTGTAGATGGTGTGATACCCGAGTTACATGGACTTGTCTTAAGAACTCACCTTCTTTTGGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589391" ref_strand="+" ref_description="SGN-U589391 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|218694563|ref|YP_002402230.1| (e_value=1e-106) transposase,; ">
      <seq>atcctgcacagcgctaatacatcgcctcatagtttccccaatatctacccatgtgtgaatatattttgagtaagcagggttgcagccacgaatgagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaatccaactgttgagagtacgtttcaatttctgactgtgttagcctggaaatgcttgtcccagccttgtttctgaccgtgaacgcgccgccagccaacatgttagttgaagacatgcagggcgattagcaacatgatatcaaaacgctctgagctgctcgttcggctatggcgtaagcctagtccgtatgcaggacttttcaagtctcggaaggtttcttcaatctgcattcgcttccaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttaattgctagaatccatggctcctttgccaacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttacagcgagatttatacaataaaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactaaatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcctactcgactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="41527" stop="42813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41838" g_stop="42513" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="699" r_length="679" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U589391" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41838" e_stop="42513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCCCTCATAATTTCCCCAAAACGTAACCATGTGTGAATAGATTTTGAGTAAGCAGGGTTGCAGCCACGAGTGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGC-CCGCAAGCCAACATGTTAGTTGAAG-CAT-CAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTT</genome_strand>
        <mrna_strand>ATCGCCTCATAGTTTCCCCAATATCTACCCATGTGTGAATATATTTTGAGTAAGCAGGGTTGCAGCCACGAATGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAATCCAACTGTTGAGAGTACGTTTCAATTTCTGACTGTGTTAGCCTGGAAATGCTTGTCCCAGCCTTGTTTCTGACCGTGAACGCGCCGCCAGCCAACATGTTAGTTGAAGACATGCAGGGCGATTAGCAACATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAAGCCTAGTCCGTATGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCCAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAATTGCTAGAATCCATGGCTCCTTTGCCAACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTACAGCGAGATTTATACAATAAAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAAATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCCTACTCGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589393" ref_strand="+" ref_description="SGN-U589393 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|151940600|gb|EDN59046.1| (e_value=9e-71) hypothetical; ">
      <seq>ggttaccactggaagcgcttgacccaaccttgttgtatgcatcatgaacgccctcttgctcatcatgttagttgaagcatcacggcgagttaggcatcgatgatatcaaaacgctctgagctgctcgttcagttaatggcgtatgccatagtccgtaggcaggacttttgaagatctcggaaggtttcttcaatctgcattcgcctctgaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttagttgctagaacccatggctcctttgccgacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttagagcgagatttatacaatagaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactagatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcttactcgacttaaccagtaccaacccagcttctcaacgggattataccatggcactttaaagccagcatcactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="41700" stop="42877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42005" g_stop="42577" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="590" r_length="583" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U589393" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42005" e_stop="42577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGGAAGTGCTTGTCCCAACCTTGTT-TCTG-AGCATGAACGCCCGCAAGC-CAACATGTTAGTTGAAGCATCAGGGCGA-TTA-GCAGC-ATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCT-ATGGCGTAGGCC-TAGTCCGTAGGCAGGACTTTTCAAG-TCTCGGAAGGTTTCTTCAATCTGCATTCGCTTC-GAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</genome_strand>
        <mrna_strand>ACTGGAAGCGCTTGACCCAACCTTGTTGTATGCATCATGAACGCCCTCTTGCTCATCATGTTAGTTGAAGCATCACGGCGAGTTAGGCATCGATGATATCAAAACGCTCTGAGCTGCTCGTTCAGTTAATGGCGTATGCCATAGTCCGTAGGCAGGACTTTTGAAGATCTCGGAAGGTTTCTTCAATCTGCATTCGCCTCTGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGGATTATACCATGGCACTTTAAAGCCAGCATCACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604818" ref_strand="+" ref_description="SGN-U604818 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|116267070|gb|ABJ96340.1| (e_value=3e-56) transposase; ">
      <seq>ataatcagacaacacttgtgcaaaatcgatcttttaacctaatctacttttacccttctgccccgatttacacttatcaacgactcaacttcttaacgatggcttgccacgccttacttgactgaataactctcactcttaactaacttggacgtaacctgccaaccatatctatatctaaacataacatcttactaatctaccgattgttacgtaatcgtctcctccacaaagagcgactcgctgtataccgttggcatgctagctttatctgttcgggcaatacgatgcccattgtacttgttgactggtctgatatccgtgagcaaaaacggcttatggtattgcgagcttcagtcgcactacacggtcgttctgttactctttatgagaaagcgttcccgctttcagagcaatgttcaaagaaagctcatgaccaatttctagccgaccttgcgagcattctaccgagtaacaccacaccgctcattgtcagtgatgctggctttaaaagtgccatggtataaatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="43291" stop="42240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43068" g_stop="42539" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U604818" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43068" e_stop="42539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCT-CTTTACCAATTCTGCCCCGAATTACACTTA-AAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTT-AAAGTGCCATGGTATAAATCCG</genome_strand>
        <mrna_strand>ATAATCAGACAAC-ACTTGTGCAAAATCGATCTTTTAACCTAATCTACTTTTACCCTTCTGCCCCGATTTACACTTATCAACGACTCAACTTCTTAACGATGGCTTGCCACGCCTTACTTGACTGAATAACTCTCACTCTTAACTAACTTGGACGTAACCTGCCAACCATATCTATATCTAAACATAACATCTTACTAATCTACCGATTGTTACGTAATCGTCTCCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAAGTGCCATGGTATAAATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604614" ref_strand="+" ref_description="SGN-U604614 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205155|gb|ABI34274.1| (e_value=3e-45) IS10; ">
      <seq>aatcgtaagattaaggtaaatgacatacttgtcagatgatccaatggatacaccacaaatctataatcagacaacaaatatgtgcgaactcgatattttacacgactctcgttaccgattctgccccgaattacacttaagacgactcaacagcttaacgttggcttgccacgccttacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgaccgattgttaggtaatcgtcacctccacaaagagcgactcgctgtataccgttggcatgctagctttaactgttccggcacaaagacgcccactgtacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="43407" stop="42468"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43130" g_stop="42768" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U604614" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43130" e_stop="42768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTAAGTTAAGGTAGAT-ACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAA-ATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTT</genome_strand>
        <mrna_strand>AATCGTAAGATTAAGGTAAATGACATA-CTTGTCAGATGATCCAATGGATACACCACAAATCTATAATCAGACAACAAATATGTGCGAACTCGATATTTTACACGACTCTCGTTACCGATTCTGCCCCGAATTACACTTAAGACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTAACTGTTCCGGCACAAAGACGCCCACTGTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600659" ref_strand="+" ref_description="SGN-U600659 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|209947532|ref|YP_002291029.1| (e_value=1e-21) hypothetical; ">
      <seq>ctgatgaatcccctaatgatttttatcaaaatcattaaattaaggtatatacacatcttgtcatatgatcacatggtttcgccaaaaatcaataatcatacaaccaaatgtgctaactccatattttacacgactctctttaccaattctgccccctattacacttaaatcgactcaacagcttatcgttggcttgccacgccttacttgactgtaaaactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="43459" stop="42637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43159" g_stop="42937" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U600659" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43159" e_stop="42937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</genome_strand>
        <mrna_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAATTAAGGTATATACACATCTTGTCATATGATCACATGGTTTCGCCAAAAATCAATAATCATACAACCAAATGTGCTAACTCCATATTTTACACGACTCTCTTTACCAATTCTGCCCCCTATTACACTTAAATCGACTCAACAGCTTATCGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569294" ref_strand="+" ref_description="SGN-U569294 Tomato 200607#2 [31 ESTs aligned] (*GB) gi|157338621|emb|CAO41972.1| (e_value=0) unnamed; (*ATH) AT1G71270.1 (e_value=0) | Symbol: None | Vps52/Sac2 family protein, similar to SP:P39904 SAC2 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04129: Vps52 / Sac2 family | chr1:26867257-26873677 FORWARD | Aliases: F3I17.8, F3I17_8; (*SWP) sp|Q8C754|VPS52_MOUSE (e_value=2e-117) Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus GN=Vps52; ">
      <seq>acttttttcctattcagagaattaaatcccaatctcgaaatttcagatctcttcttggctcttcacggctatcaggtaactttgtatattactacaacagtacatttacaataagatcattttactctgaagacctccaagatcatttccagaacatcatcacaaagcggtttttttttttttcagagaatcaaatcccaatctcgaaatttcagatctcttcttggctcttcacggctatcagatagctgtacggtgtagatcagtagaaagttgttggtttgctctagttgctatggtggatgtggctggcaacacgtcgaaaacctccttggatttgggatccttcgttggcgatttgaatgttgatgatgaaactgccagtgatgatatatcccttgagggactcgaggaagagttacaggaatgtcaagctgatgatgttgtcgcaaacatactttctaaaggtacaacgttgcgggaatacactaaaggcgttgaaaataatttacgtcaagtcgaattggattctatccaggattacataaaggaaagtgataatctcgtctcacttcatgatcaaattcgtgattgcgacatgattctatcacagatggaaactcttctcagtggatttcaggcagagataggttctataagttcagatatcaaaattctccaagagaagtctatggatatgggagtgaggctgaagaatcgcaaggtagcagagtcaaagttggcaaagtttgttgaagatattattgttcctccaaggatgattgacataattgttgatgaagaggttaatgaggaatacatgaggacccttgaaattttgagtaaaaaactgaagtgtgcagatgcagatcccacagttaaaacatcaaaagccctgaaagatgtgcagcctgagctagaaaaacttcggcagaaagctgtctccaaggtgtttgatttcatggttcagaagctatacgctttaaggaagcccaaaactaatatccagatccttcagcagagtgtcctcctaaaatataagtatatcctttcctttctcaaggagcatgggaaggaagtgtatcttgaggttcgagctgcatatattgacacaatgaacaaggttctgagtgcacagttccgcgcttatattcaagctttagaaaagcttcagttggatatagcaacatctaatgatctgataggtgttgagaccagaagcacaggtcttttttcgagaggaagagaaccattgaagaacaggtctgcagtttttgctcttggagaaaggataaacattctcaaggagattgaggaacctccattaattccacatattgctgaagccagctcaaaaaaatatccgtatgaggtccttttcaggagtttgcacaagctgctcatggatactgcttcttctgagtaccttttctgtgatgatttctttggagaacagaccatgtttcatgatatttttgctggcccgttttcagtaattgatgagcatttcagcacaattcttcctaatagttttgatgcaattggcttaatgctcatgattcgcatcatacaccagcaccagcttgtaatgtccaggcgccgaattccatgcctggattcatacttagacaaggtcaatattgctttatggccacgtttcaagatggtctttgacttgcacctccacagcctgcgaaatgccaatatcaggactctctgggaagatgatgttcacccacattatgtcataaggcgctatgctgagttttctgcgtcccttattcaccttaatgtagaatacaaagatggccagcttgaactgaatctggagagactcagaatggctgttgatgacttgcttgtcaagctatcacaaatgtttgctaaacaaaagttgcaaacagtattccttataaacaactatgacatgataatatcggttctgaaggaagctggtccagatggcgggaaaatccagcagcactttgaggagcttctaaagaataacacagccatattcgtggaagaattgctgttggagcattttaacgatctcatcaaatttgtaaagacgagagggtctgaggatccaagtactggcactgaaagacctataactattgctgaagttgagccgattgtaaaggactttgcaagcagatggaaagctgccattgagcttatgcacaatgatgtgattacttctttcagcaatttcctgtgtggtatggacattctaagagctgcattaactcaacttcttctctattatacaaggctttcagattgtataaagaggataaatggtggttctaccttgaacaaggatcttgtttcagtttcatcgataatgtatgagatcagaaaatactcgaggactttctaggacatttttctcttttcaagtccgtattacagtctcttgaatttgtatttacctataaaagaatttcaattgaccatcacattttgtaagattgtattgttattcacattttgtaagattgtattgacattttctgcaacttattaatgtgtgtaataatctttatgatactatttataattcgggctttcactttcagcccgatggtgatcacttttacgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="71701" stop="54052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71401" g_stop="71327" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71326" i_stop="68446" i_length="2881">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68445" g_stop="68213" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="322" r_length="247" r_score="0.820"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68212" i_stop="68099" i_length="114">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68098" g_stop="68037" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="384" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68036" i_stop="67927" i_length="110">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67926" g_stop="67869" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="442" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67868" i_stop="67703" i_length="166">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.561" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67702" g_stop="67607" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="538" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="67606" i_stop="66334" i_length="1273">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66333" g_stop="66232" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="640" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="66231" i_stop="65914" i_length="318">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="65913" g_stop="65830" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="724" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="65829" i_stop="64689" i_length="1141">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="64688" g_stop="64608" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="805" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="64607" i_stop="63861" i_length="747">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="63860" g_stop="63717" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="806" r_stop="949" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="63716" i_stop="62419" i_length="1298">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="62418" g_stop="62327" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="950" r_stop="1041" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="62326" i_stop="61042" i_length="1285">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="61041" g_stop="60960" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1042" r_stop="1123" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="60959" i_stop="60216" i_length="744">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.828" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="60215" g_stop="60033" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1124" r_stop="1306" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="60032" i_stop="58904" i_length="1129">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="58903" g_stop="58788" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1307" r_stop="1422" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="58787" i_stop="58648" i_length="140">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="58647" g_stop="58589" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1423" r_stop="1481" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="58588" i_stop="58177" i_length="412">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.865" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="58176" g_stop="58076" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1482" r_stop="1582" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="58075" i_stop="57045" i_length="1031">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="57044" g_stop="56994" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1583" r_stop="1633" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="56993" i_stop="56302" i_length="692">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="56301" g_stop="56122" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1634" r_stop="1813" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="56121" i_stop="56039" i_length="83">
            <donor d_prob="0.395" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="56038" g_stop="55904" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1814" r_stop="1948" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="55903" i_stop="55470" i_length="434">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="55469" g_stop="55395" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1949" r_stop="2023" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="19">
          <gDNA_intron_boundary i_start="55394" i_stop="54994" i_length="401">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="20">
          <gDNA_exon_boundary g_start="54993" g_stop="54936" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="2024" r_stop="2081" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="20">
          <gDNA_intron_boundary i_start="54935" i_stop="54864" i_length="72">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="21">
          <gDNA_exon_boundary g_start="54863" g_stop="54352" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="2082" r_stop="2608" r_length="527" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U569294" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>2579</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569294" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71401" e_stop="71327"/>
          <exon e_start="68445" e_stop="68213"/>
          <exon e_start="68098" e_stop="68037"/>
          <exon e_start="67926" e_stop="67869"/>
          <exon e_start="67702" e_stop="67607"/>
          <exon e_start="66333" e_stop="66232"/>
          <exon e_start="65913" e_stop="65830"/>
          <exon e_start="64688" e_stop="64608"/>
          <exon e_start="63860" e_stop="63717"/>
          <exon e_start="62418" e_stop="62327"/>
          <exon e_start="61041" e_stop="60960"/>
          <exon e_start="60215" e_stop="60033"/>
          <exon e_start="58903" e_stop="58788"/>
          <exon e_start="58647" e_stop="58589"/>
          <exon e_start="58176" e_stop="58076"/>
          <exon e_start="57044" e_stop="56994"/>
          <exon e_start="56301" e_stop="56122"/>
          <exon e_start="56038" e_stop="55904"/>
          <exon e_start="55469" e_stop="55395"/>
          <exon e_start="54993" e_stop="54936"/>
          <exon e_start="54863" e_stop="54352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTTTTCCTATTCAGAGAATTAAATCCCAATCTCGAAATTTCAGATCTCTTCTTGGCTCTTCACGGCTATCAGGTAGCTTCCTTCTACTACTTTTTCCCTTTGGATGATTTACTTGTATCTTTCTACAATAGCGTCTTCTGGTTTTGTTGTTGTTGTATGCTGTTGATCGATTATGATCTGTTTGCTTTTAAATGCATCTGTTTGACATTATTACTACCGAAACTTCTGTTTCTCTTCGACATATTTTTTCTTATGTTAAACGGGTTATTCTTGTTTGGATTAAAGACAGTGCTTTGAAATGTCACAATTTTCAAAATAGGTATTATAGGGAGAAGTCCTCACCATAAGTAAAGTAATTGAAGTGACAAACAACAAAGACAAGTAATTCATATGGTTTTATCACTCCTATCCACGACCATACAAGGCTTTATTTGAATATCTTAGGATCAAACTAATTCCAGAAAGCTCAAGTATGAAGACAATGACAGTTAATACAGAAGTACAATGGTGAAGTTTGATTTTCATGTGAGAGTGGGTAGTTCTTAAATTAATATCCCCTGTTCTGTTCGTTTCGGAGCGTTTTTATTTATAGGGCCGAGGTCTCTTGGAGTCCAAGACCTATTGGAATCTCCGTTGAGAAGAAGTCGGTTGCTAATTGACAAGTGCTGTGCAGATATGCATCCCAACTAATGCGGGGTGGTTGAGGAGTCAGCGAGACTCTCAATTCTGTCCCCATGACTTAATCTGTGGATTAAATGAGCATTACCATGGGATGGATGGTTGGAAGTCTACATCATGAAAGGTCATTCACGCCCACACTCAGATTATAGGAGGTCTGAGAATGGTTGTGTGATCATCAACAACAACAACAACAGATTTAGTGAGATACTGAGATCCCACAAATGGGGTTTGGGGAGGGTGGGTCTACGCAGACTGAGATCCCACAAATGGGGTTTGGGGAGGGTGGGTCTACGCAGACCTTAACCCCTACCTTTGTGGGATAGAGAGACTATTTCAGAAAAATCTTCGGCTCAAAAAAGTGATTTTCGAAGTAGGTTTGAGAAATATAAGAGTGAAGAAGATGTGATGAAAATAAGTAATTGAAGAAAAGTAATGACAACAAATGAAAGATAGCCAATGTAAAAGAAAAACAATAGTAGTAAAAATTGGAGGATGAGATAACAGAAGAGTAGTAATGATAATACGATAAGGAGAAGAGGAATCAAATAAGGTGTTCTAAACTAGATTCATGCTCTCTCCCAGAAGAGAGGGAATCCTCTCTACTTCTTACTAACCTTCCGCCTTAATCCTTGACTTCCATGCTCTCCTATTTAGGGCCATGTCCTCGGTGAGCTAAAGATGTATCATCCCTGTTTAATCACCCCTCCTCAGTTCAATCATTCATGCACTCATATTAGGTCACTCTTACTAGGAGTTGGTTGTTTGAAGACGATATGTATAAGGAGTCAGAGACATGTTCAACCTCTGATGGAAAGGTTTCATCCTGGGCAGTGGGTGGTGCACATGCTATTTTTGCCCACTACTGGTACTTTCTTAATGCACTGTATAATTCCTCCATGATCTACCATTCCTAATGAAACTGCGGGAGAGAGTCTCAAGGTTATTGGCCTCAGTCAGTTACTAACCGCGAGCTTTAGTGTTTTCTAGAATGTTATATCTTGAGGAGTTGGCTAAGATACTGGTGCATTTACTTAGAATAGTCTTTTTTTTTCTTTTAATGTAGCTTCACTTTTTTCTCCTGGAGAAACTGTAACTACCCCTCTGACCCCTTTGGTTCTGCACTTCTGTTTATATACAAGTTGTTACCTATTAAAAAAAAAGTAAAATTATTTCTTTTAGCAGAAAAACTGCTTCTCTTGTTCTCACAAACGTTTTCCTTTATGGCCGAACACTTCAGTTTTCCAAAAGAAAGTGTGTTTGACATCCCAAACGCTTGGCCAAAAAAATGAATATTTATAGATCTTAGTGCTGTAAATTTATTCAATAAAATTATTTAGATATGAGATCTTGAATTTGTTAGACTTTTTAGTTGGTTTGGATATGCTTCTCTAATGAATTTTCAATGATTTTGGTGACTTTGTAAAACATTACTTATTTATTTGTTGGATCACCGAATTAGCAACTCCTCGACATCTCCCTCTCCATGACTTATTCAACTTTAATCATAAAATCTGTACTAGTTTTTTACTTAAATAAGTAGTATTAACCCCATAAGATTAATAAAAAGTATAACACCTTAAGATATTTTTGTCACATATTAGCAAATAACCCAATAATCTCTCGCTGCGAAGTTCCATATTCAAATTGCTATACATTTTTAATTTAAAGTATAACCATTCATTATGAACTCGCATAGTTATTTTGGATAAGTTGAATGTAACTTTTCCAGTACTTGTTGGATTGCTGAATTAGCACCTCCTCCACATCTCCCTCTCCACAATATGTGTACTAGTTTTCTACTTAAATCAGTAATATTTAACCCCATCAGATTAATAAAAAGTATTTTACACCTAAGATATTTTTGTTACATAGCAGCAAATAATCAAATAATCTCTCTGCTAAGTTTCATATTCAAATAGCTATACGTTTTCAATTGAAAATATATTAACTACTCATTTTGAACTCGTCTAGTTATTATGGATAAGTTGAATGTACATATATTATACAGACCCATTTTAGTACAAGCCCGTGTTTACATATAACAATAATAATAACAACAGAAAGTACCCTGATTGGTAAACTGTATTCCAGGGCATTTTTGACAAAATCACCTTTTGTTCCTTATAAAAAAATGGTCTTGTTGACAAAATCACCTGTGTACCATTCAATGTATTTGTGCTGTATGTAGTAAAGCTTGTGCACTTTCCTGGTAATAAAGAAGTCGGAATGCAGTGACTAAACTCTGAAAACCTTTTTTTTTTCCTTGAAGCAGGTAACTTTGTATATTACTACAACAGTACATTTACAATAAGATCATTTTACTCTGAAGACCTCCAAGATCATTTCCAGAACATCATCACAAAGCGGTTTTTTTTTTTTT--GTGGTTCTATTCTGAATATAGAAA--T--G-TTTGATC-TGG--CTT----GCTCTTAGATAGCTGTACGGTGTAGATCAGTAGAAAGTTGTTGGTTTGCTCTAGTTGCTATGGTGGATGTGGCTGGCAACACGTCGGTAAACAGTTGTTTCTCTCGTTTTCCTGAAGTTTCATGCTTTAGTTTGTGCACATTTTCATATCCTTGTGTTGCCTTACATCTGTGAACTTCGGCAAATGCTAATAATGGGCAGAAAACCTCCTTGGATTTGGGATCCTTCGTTGGCGATTTGAATGTTGATGATGAAACTGCCAGGTTTAATTTCGTGGACTAGTTTTGCTAATTTTGCTTTAATGCTTGTAATTTTTCATTCTCGATCCTCTATATATGATGAAATTTAGGACATTCATCTTCTTTCTTTCCAGTGATGATATATCCCTTGAGGGACTCGAGGAAGAGTTACAGGAATGTCAAGCTGATGATGTAAGAAGATTATACATTTATGTCTCTCTCTTCGTAGTGACAGCTGAATCTATTTCCGATTAAAGCTTGCTATTTGTTACAGTTTTGTCCAATTTTTATCCCCTTTGAGAGGATAGGTTTGGGGACACTGATATTGGGTCTGTATTTGCCTTATTTGTATGCAAAGGTTGTCGCAAACATACTTTCTAAAGGTACAACGTTGCGGGAATACACTAAAGGCGTTGAAAATAATTTACGTCAAGTCGAATTGGATTCTATCCAGGTTTGTTGTAATAATACATTAAACACTGTTTTGTCTGTATTTTTTTTGTTTGAAATTGGTATTTGTTTGTGTGTATTCATAACTTGGGAATTTGAGTTGTTCGGTTGTTCCAGTTTGGACGTTTAGGTTTATTATGTATTTTGCTTTCCGGTTCTTTATTTTTTTTGAAAGAAATGTAAGATATTTTCATTTAACTTATTACCCAGTTATTGCTAATAACAAAAGTCTTTACAAGTACAATGGCTTCCTTGTTTAACTATGTAATGGGGTTCCTTGTTTAACTGTGTGATGGATCAATAAATCTGCATCTTCTTGCATAACCCCTTTCACCATTGTTTATTAGCAGTATTTACCTTTTCCTTTTGCCTTGATAATTTTCTAAAAGAATCTCACTCTTGTCTGCATAAGCATTTGGACCTTAGTCTCCAAGTAATCTCTTTAGCTTGCTAGCCTTTTCCCCGAGCAATGTCTTCTCCATTGTTTTCTTCTTTGACATACTTCCGTTCTCGGTCCTTTTTTATTAGATAAATGATTTTATTAGTAACAGAAAAATATCCTGTATACAAGCAAGCAGTACACCAAATTGTAGCGAATTTACAACCTAATGTGATTCTCCATGAAAGACATCCTGTCTTCTATATAAATTGGAACTTCACGGCTTGCATAAAAGAAACTAGAAAAGAGAGTCTATTCTTCAAATGTACGCGGTCATTCTCCATCCTCTCGAATGCTCTCTTATTTCACTCCATGCTCAGTTTTTCTTTCAACGCATCTAGGTTCGAGCACCATATTGTCTTATTTCTTCTTTAGTCTCCTGTGGTTGTTTTCTCCACTTAGTGTCTTCATTTTCCTTGCTAGAATAAGGTCAAGTTTTTCTCGACCTGCACTAACAATACTCAAGTTGTATGTATAATTCAACTTGTGACACATAAAGGACACTTGTCTTCACACATTTTTGATGTGCCAGAAATTTACATTTTGGTATGTGATCAGCATTGAACCATTGCCGATTTCATCGAGCTACTAAATATCCTTGCACTGTATGTAGTTTACAATTTTCTCTTTATCCTTAGTCAATCATCATATTTCTTTTCAGAAATAGATTTAATAAATCTAGTCGTCACAACACAAATTCATGTGAAGCCTAATGAACTTGGGTATAATGACAATACAATACAATTAAATCATACTGTGCTAATTTCTTGGGGCAGTGCCTTGTAAATTTGGTTATAGTGACATTATACTGATATATGATCTTTTATCAAATCAATAGGATTACATAAAGGAAAGTGATAATCTCGTCTCACTTCATGATCAAATTCGTGATTGCGACATGATTCTATCACAGATGGAAACTCTTCTCAGTGGATTTCAGGTACTTTCCATCATTATCATGTTAAACTGGATGTCAATTTTTTTCCTGCTTAAGAAAATCAGCTATGATTGAGGCTTCTAACTTTGTTCCGGAGATGATATGATTGATAAGTGGTAAAAGTAGGTCGACTTGTTACCATTATTAATATTGTGGTTTTATTTTGGGGTAAAATCACTGTCAGGATTTCTGTCTCTGCCTTCCGTCACCAAACAAAGAAGAAAATGGAATAAATTAAAGAAATACTACATAACATCTTAAAAGTGAACTTGCCTGTATGTTTTGTCATTAAGACTTGATATTCACTGTTTTATCTTCCAGGCAGAGATAGGTTCTATAAGTTCAGATATCAAAATTCTCCAAGAGAAGTCTATGGATATGGGAGTGAGGCTGAAGAATCGCAAGGTATTATTGTTAATGGATGGACCTTCCTTGACTGTTTATAGTTTAATCTTGGGCTTCCTTTATTTGGTTTCATGTAAGTTACATCTGTAGATTATTAGCTAGCTTCTTATTCTGAAGCAATGTCGATACTGACGGCTATTGTTGGAATGTAATTTAATGTTCATATGTGAAATTATCAGTCTCAATGAATAAAGTATACTGACTATATAAGTATATTTCATACGTGAATGTTATTATTTGGTCCGAATGTGTGTTATTGACCATTTTCTTTATCTTATACATTTCTAGATATCTTACTTTTTACATTACTTTCTGTAGAAGACCTTATGAGTAAATCAGTCGTGGATGGTGGGCTCTTTCGCTAAAAGTCTGTCTAAATCTCATCCCCCCCTCACACACACAAGTTCTGTCTATTATATTTTCTCAAAAGGCTTCAACACCTCCAAAGAAACAGGAAAATTTCTTGGTAGATTACCCTTATCCAATGAACAGAATTCTCATCTCTTATTACTTATAGTACACTTTGGTAATGATCATTGCCACCTTCATAGTTTAAGACAATGAATAGAAGAAAACATATATTCTTTTTGCTGTTGCTGTTGTCATCTTTGTTGTGTCCTTTCAAATTTTCTGAATACCATTTCCTATTTTTATCTGATATCAATTTGATTTCATGAACTTATGAAAGACTCACCAAATTAGCTGTTCACAGTCATGCATTAATTTACTGGGAATTTCAATTTAATTACAGTCTTAAGAATAGAACCATCCTGTTATTAGCTTTTTGGTGCAGACTTTCTTTTGTACATGATATGGATGATATCACTGGTCTGATCGGTTCCTTGCATTTTTTTGTAAAGCTTCTTCAGCACAACCGTAGTGCTGTAGGCAACTCCAATAAAAGGTTTTAACACTTATCAATAAAATATTCCATTTTAATCTCGTCGACACTTCACTTCTTCTTTATGTTTTTCATGATGTACGTCTTCTTAGACTTATTAGATGTATGTTAGTGCAAATTGGTTATGCTGTGGGTCCACTATACTTTATATGACAACCATATTGAGTGTTGGTGTTTGAGCTAGGAATATACTTTCCGATGTCTGTAGTGTACTTGCTAAATGGTTATATTATTTTGCAGGTAGCAGAGTCAAAGTTGGCAAAGTTTGTTGAAGATATTATTGTTCCTCCAAGGATGATTGACATAATTGTTGATGAAGAGGTGCTTTTGGCTCCTTGGTTTGTTTGTTCCTCATATTTATTCTTACATTGTAGCCTACAGCTATTCCAAGAAGAATAACAATGAGGGAAAATGGCAAATTTGAAGTTCAAGTAGAGAAATAAAGTGGTGAATGGGTTCTCCATAGTCTTTCATATGATTTTGAGGACAATATGTGACATGTTGGGGTGATTGACTGTAGTATGTTGGTTTATTCATTTCTTTCAAGTGATTGTTGATTTAACTTTCAAGGCTTACATTGCACTGCTAAATAATTTATCAAATTACAATAGAAAACTCATCTTCTTGGTTGTAGTCTTTGTAGACTGTTAACACTGGACTTTCTCGCTTCTTTCTTTTTTCCATCATTTCTCCCTCCTGGCATACGAGTCTACAATAAAACACTGTTCTTTCTGGTAGTTAACTGTTAACGCTAGCCAAACTTTCTCACTTCTTCTTTTGTTTTTCCCTCCTTTTTTGGTCTTTGCTTTGCTGGTATTACGTTACTACATTTGATAATGGGGCTTTGTTTGGAATGTTTCTTCCAGTTGATAATCAGCTCTTCTCAAAAAATAAAAACAATAATCATCAGCTCTTCCGAACCATTGAAAATATAATACATTAGATCTTTTTCGTTGTCTGTATTACATCATTCTTTGAGATGTTTAATCTTCAGAAATTGCATATTTGAAAGCATTGTTCACTAATGATTTCTAACCTTCCATGCAACATTAAATCAAATGTTTATAGGTTAATGAGGAATACATGAGGACCCTTGAAATTTTGAGTAAAAAACTGAAGTGTGCAGATGCAGATCCCACAGTTAAAACATCAAAAGCCCTGAAAGATGTGCAGCCTGAGCTAGAAAAACTTCGGCAGAAAGCTGTCTCCAAGGTATGTATATGCCGAGTAGTCTAGTGTATGCTGAGTTTCCAAGGTATATAATGCGGAGTGCAAGGCTAGTCTCTTTGGGGATATCGAATAAAAATTGTACAGTACGAGAACTGAGAAGATTAGCATGTCCTATGCGCAAGGATGTCAGTCAAATCGAGATATGTCCGACTTTTTTTTCAATGAAAAAAAAAGGCGTGCAAGGTTACAATGACAACCAATTCAACCAATAAGCCTAGAAAACAAGCTGTACAAAAGTGAAAACTATATCATCACTCATGAAAAATAGGTTATTATCTCAGTACCCAAAAGATTGTACTAAAGGAGAAAAATGGTACCCTTTTTACCCCATAGAGATATTGAATAGAAAGGGGTTCTGTGTTTCCTCCATAATTTTGAAAATGAACATTTAAATGCCCTTCAAAAGTAAGTAAATAGATCCGAAACATAAAATTAAAAAAACATCCAGGTAAGCAACGAAGCCAATGTCAGACAGCAATAACATCCTTAGTTCTCATCTGTTTGCTTCACTTCCTGCTCTTGCTTAACCACTGTGTCGCTGCTGGACCTCACCCTATAAACATTTTTACCCGTTAAAATTTCTCTGTGTTTCCTGGATTTATTCCAGTCTGCATCTTATCTCTCATTCAATCTGCTCCGTTCCGTAACACTTATTCTTATCTGAAGATCGCTCTCGAGTCTCTGAGTAATATCTGTGCTTTCATTTTTCCTGTTGTCTTCTTTCTGAGGATCCTTCTTTTACTGTTCAATGAGTATTCTCCCAGTTTAACGACAAACTTCTTATATATATAAAAATTTGAAACATTTCACCATTATTTTCTGAGTATCCTTCTTTCTCTGTTCAATGGATCACCCTCCAATTTAATTCTACAGGTTATTATTATTATCAAAATTTGAAACATTTTTGCATCGTATTCTGAATTTGCATCAAGCAAAGTTGCGTGTTGCTACCTTCGGTCTATGTGAACCTCCTTGTCTTCCTCGGTCTGTCAAACACTTTTCTCTACATTCTTAACTGAAAAACAGAAATAAACTTGTACCTTCTAGGATTTTGATGCCTCAAATTCACACTGTTCTTTTTAATGCACTCGCCACTCCAAAACGAAGTTGTGCCCTCATAAGGTGATAAATGATGTCTAATTATTGTTTTTACTTAATGCATGTGCTTGTTCTTAGTGGGTTTGAGTCGTAATTGGTTTACCAATAAGAAGAGTCTTAGATAAGCAAGAATAGTTTTTGTCAGTTGTGACATCTAATCCACTTTCTTGTTCCTCTTTTAGGTGTTTGATTTCATGGTTCAGAAGCTATACGCTTTAAGGAAGCCCAAAACTAATATCCAGATCCTTCAGCAGAGTGTCCTCCTAAAATATAAGTGAGTTGCATCTTCTTTTGGTTTCTATCACACTCCCTCTGTTTAAATTTGTTTGTGTGGTTTTGACTTGGTGCTAAGTTAGAGATAGTAAAGAGAACTTTTGAATCTTGTGTCTTAAATTAAAAATATGTGGAGTACACCAAAATGCCCTTGAATCTTGTAGTCTTAAATATGCAATGTGGAAAACTGGAATTGAAGAGTTACTGAAAAAGGAAAGGGGCCTTGTTTTTGAAATGGACTAAAAATGAAAGTAAGACAAATAATTTGAAACAGAGAGAGTTTATTTGTATTTCTCATTCCTTTCTTCCGGACTACTGATGATTAGCTAGTTTGTTTGTTCACAACGAATTTCCTTCTCTACCATTTACCTGAATGAAAACATCCAAGAAGATCCGTTTATATAAATTATCCCGCTAAACATACTGTGGATAGCAACAATATTTGTTTGGTTCTTAGCTGTGGCACACACCAGAGTTTTCGTGAGTGGTATCAACGTTTGAAGAAGTGAAAAAATCAATAAATTACTATGGTAACAAGCGGTGTCATTTTTCATATTTATACCCAATATTTTAGTTTGCTGATATGTATCTAGTAAATTTTTTTGACCAAGCGATTGTCTAGTGACACTGGCTGGGCAAGGTACATGTGCACTGTTTTTTAGTGCTCCTAACTGCAGTACTGTTTTGTTTAGCTACTATATCCTTGTCAGCTGTTGGGACGTTGGAGAATCTCTAAACAGAGTTACCTTTTAAACAACAATACGGATGAAATTTTGGCACTTCGAGAAGCTTCTTTCGTTCCTTTTCCTTACCTGCCCGTTAAAAGGAGGTATCTTCAAAAAACAGACATGGTTGAAGAGTTGCATTTTTTGAGTACTGAAAATTAAGGAGTGTTTTGTTTGTGGAAGAAGATAAAGGTGCTTCATTGTTACTCTCCACAGATTCTTTTGAAGAACTTGGAAAAGCTGTTTGGAAAAAAACTTATACAAACAGTTTTTCCTTTTTAAAACAAACAAGTTCTTAAAAAACTTCGAAAAAATAAACAAAATGTGTAGAAACAAAGCCAAATTTATGTGCTATCCTGGTGTTTTGGGGGGCACTACCTTTTATTGCTATTGTGGTCCACTTATATGATATCATGCAGGACGAGTTTTTCTTAAGAGGTCCATAGCTTAAAATTATGATGATCATCAGCTTCTGTGCTTCCTTCTAGTTTCTTTTCACCTTTCAATTTCCTGGATTAATCCAAACATGCAATTGAAGGTATTTTTGCAATTATTTTGCAGGTATATCCTTTCCTTTCTCAAGGAGCATGGGAAGGAAGTGTATCTTGAGGTTCGAGCTGCATATATTGACACAATGAACAAGGTTAAGTTTCACTTTATTTTTTTCATTTTGAATAATTTTGCTAGCTTAGATGTTTGATGGATCGATTAGTAAAGATTTTGAGTTCTTAGATATGTAACTCATTCAGATCAATGTGGTAACTCTTGACATGCAAGTTTGAAAGAGGATTTTATATTCTTAAGGTCCACGAGTGCTTAACTTGACTGTTCCTTTGGTGCCCATCCTTCAAGATTTAAATCTTTTGTGTATGAGTTCTAAATGTTTTTCCGTGTCGTATGGAAGACGTTAAAACACCTTGTATCTCTCGAGAAAAAACATGACTACATGACTTAATTTGGTGTTCTGCCTAATGTTTGATATGCCTTAGTCTAATCAGTCTTAAGCTATCATCATAGATCTGGGTTGCCCCAACTTATTGTTATATCAAGTATTGTAGCTTCTCTTTCATCTTGTAAGCTCTAGAGACTGTTACCAATCACAGTGATCACATGTACAGGTGATAACAGCCTTAATATGCTTTGGCTAACAAGAGATTGTGCTCTTTCGTTTCATTTTTTGTGTAAAGAAAGTCATGTAGAGGACACAGAATTTTGGTTGACATGTTATTCTTTTGACATTATAATGTAGATCAATTGATCTGTCCTACCCTTTACATATGACATTCATTGCTTTGGTGCTTTTATCAATATATATACTGTTAGTAATCTTAAAAGAAAAAGAGATTGTGCTCTTTCATGAATACTAAAGCAAACATTTGTGTCCCAGGTTCTGAGTGCACAGTTCCGCGCTTATATTCAAGCTTTAGAAAAGCTTCAGTTGGATATAGCAACATCTAATGATCTGATAGGTGTTGAGACCAGAAGCACAGGTCTTTTTTCGAGAGGAAGAGAACCATTGAAGAACAGGTCTGCAGTTTTTGCTCTTGGAGAAAGGATAAACATTCTCAAGGTTTTCATCTTCTTTCTTTGAGCCTTTATCTTATGACCAAAAAGATTGTCTCTGTATAAATCTGCAGAGTCCAGAGATTACGACTTCTGTGCATCATTGAATGTTAGTGCTTGTTTGAGTATAAAGGTATCTGTAAGTTTCACTCTGGTAGAATTACTTTTTAGTTTGAAGATAACTTTGATTTAGTGCTTTTGGAGGATGCATTGCTTGATGAGTGGAATGCATAACTAGGACTACTGACTAATTCATCAGAATTAGCTTCAGATGTGTATGGTCTTAGCACTTTTAATAGCAGATACTTAATGGAGATACTTATTCAAGGATGATGTGCAAGTGAAGGAACCTATCTAATGCTAAAAATTATATATTCTGTGATGCTTTGGTTCTTGCGTTTTTTAGTTATTCTGTAGACTGTCATTGTTTTTTCTTCAAAAATTGCTTATAAAAAAGTCATATTTTCAAGTATTACTTTTTATTGTCAAGGAGAAAGTTCTTTTTAAAATGTTCTATGAAGACTTAGGCAAATGTTTCTCCAAGAACCATATGAGTTGCATCTGGGTTCTTTTTCTTAATTTTTTTAATCTGGTTCATTCCATGTCTCATTTCTATGCAAACTTTAGCCTGGGTTGAACCTGTATGGGTAGATCATCTAATACCTGTTTCACTGACCTATTTTCAATCTATTGGTCCAAGTATAAAGACAATTGAATGTATGCAACATATTATGTAAGAACTTGCTATACAATTTCATAAAGACCCGGAGCTACCAGATTTCAATATATTAGCCATGGGAATCATTCTAAAAAAAGAGAGATCAGCATTACTTGGTGAAATAACGCTCTTCTAGAATCAATTTGAAGCCATCTGCTAGAGGTTGTGACAATCCAAATGATCCCATTATATCAAGGCCTTTTCTTTTGTTGCGCAAAGACCACTACTTATGCTCAGCTAGCGCTAGAAATGCTACAAGTAAAAGTGATTGAATCAACTATATACTTATTTGATTTTCTATCAACTCTTGATCTGGTCTGATCTCCACACCATTCATAGGAGATACGCGAAATATTGTAGCAATGTTCATGATGATTAGATGTAAGTATTTATGGCATATGCTTTCCACTGTGTTCAGGAGATTGAGGAACCTCCATTAATTCCACATATTGCTGAAGCCAGCTCAAAAAAATATCCGTATGAGGTCCTTTTCAGGAGTTTGCACAAGCTGCTCATGGATACTGCTTCTTCTGAGTAACCTACAATATTCTCTATTTTTGAATTCGATGCTTGATTTGGAATTCACTTTGAAACAGTACAGCTTTCCTACTGACAGAGTAGTGGCTTTCCTTGTTAAATATGTATTAATATGCTTTTTCCTTCTATTTGATTAGGTACCTTTTCTGTGATGATTTCTTTGGAGAACAGACCATGTTTCATGATATTTTTGCTGGTATGGGAAGTAGTGAGTTTGAGTAGACATTTCCTTATGTACCTTGCTGCAGATAAAAATCACGATTGTGCTTAAAGTATTTATTGGTAAATAAAAAATCAGATTTCAAAAGTATCTTGACAACCCAAATCAACCTGCTTAACAGAAGTTGTATATGCAGTTCCTAGGACTATCAACCTAATCTCATGTTGCTTTTAATTCATTAAATTAAGTAGAGATCTCCTTCTCCGGTTCTCCCAATCTGTATTCTGACAATTCTCAAACACCTTCAGTACATGCTGAAATATAAAAAGGGCTGCCCACTGTACTAAAGCTCCTTCACACATGCTGAAGTATGCAAATGTTAATTTTGATAGGAATAATGCAAATTCTTGGATTTTCAATGAGATTAATGATTAACATTTGATATCAGGCCCGTTTTCAGTAATTGATGAGCATTTCAGCACAATTCTTCCTAATAGTTTTGATGCAATTGGCTTAATGCTCATGATTCGCATCATACACCAGCACCAGGTATATCCCTACACTTCTGTTCTCGTATTAAATTTCAAAGCAAACACAGCTAGTATTAGAATCCTATAAGAGGAAATTTGTGTATGGGTGAAGTTCCAAGGTTCACTTGACCACGGTTATCCAACAACAACATCAAAAAACTGGAGAAAAAGGGGTGTACGGGAGAAGAACAGAAGAAATCTGATTAGGTTTTACAGCATTGTTGATTCAAATCTGTCTTAAACCCAGCAGACACATGCCATTGTTTTGCGAAAAATTCCCAGAAAATATAGTAGGGAAACTAGATCTTTCTCATGACTCCAGTAAATGTTTGGCAGCAACTTCGAAAAGCAAGGATTGCTGGTCGATTTTATTAGTTGATTGACAGCTTTTAGTAAGTCAAGCTTGCTCTAGTTTTTCATTGTTTTGGCGTCTAAAGTATTGCATGCTGCAAAATTTGGGAGACACTAGAAGACTCTAAACTAAAGACAAAAAGATATCTGAAATACCCTTACGAATTGCTAAATTGACAACTAGTGCATTAATTTTTTCAAACTTATTCAAGTTAAACAATGTTATCCACTTGAGCTTTAAGTTCAGATCACTGTTGCACATATCATCTTCTTTATGCTAGTTATATTCATACATACTGCTAAAGAAAATTGTTTATTGGAATTGGAAGTATTTCAATGAAGTTAGTCTTTAGCTCAAAAGAAAACATAATAATAATTGAAGCGTATTGAGGTAAAAATGATTCACAACTGGGGAAATCTCAAAGATAAAAAGCAAATGAAATATGTCATTTCCTTCTAATCTTCTAAAGCGTATAGAAGTATAGCAAATGAAATATGTCATTTCCTTCTAATCTTCTAAAGCGTATAGAAGTATTTGATTATTAGAGAATTCATTGAGGAATCATGTGTTAAATGAATATGTGTAATGGTCCAATAGCATGCCAAATTTTGTTTATGAACTTGATATGAAATGTATTGTTATGGCCCTTAATTATTGCTGGAACCTTTTCTTATCGATGGACTGCTTTTATTTCCCAGCTTGTAATGTCCAGGCGCCGAATTCCATGCCTGGATTCATACTTAGACAAGGTACGTATCATTTAATTCACTTTACCACCAAGTCACCAGCATCAATGACAAATATCCATGTTCCTGCCTTCTGCACATGCATGTGAGCTATTTGTGTACAAGTGAACTTAAAGAACTTGCTGTAAATTTCACCAGATACTTATTCACCTGTTGCCTTGTAATGTATGTTCTTGTGTATTTTCCCATTTGTTGCTACTGTGTTGTGGAAAAAGGACAATTGCACAAGCATATCTAGGACTGCAGGGTTTCCTGTTCCGAAAGTATGTAATTTATCAATTTGGGATAAAATTAATAATATTACTATGTTGTGGAAAAAGGACAATTGCACAAGCATATCTAGGACATGCAGGGTTTCCTGTTCCGAAAGTATGTATAGTATAAATTTGGGATAAAAATTTTCATCTTTTGATTCATGATGTTTGGCTAGATACATAACTTCAGCAAAAAGAGAATTAAAACAGTTTGCTAATTGAATATGTTCAGGTGACCATTTCAAAATGAGAAATAAGGAATTAAGATTCATAATTATAGAAAGTTCAACAAAGGTGAATATAAATGTAAAACAACTCCTTAAGGTCTTTAGAAAGTTCAACATGATGATGACATTGGAACCAAAATAAAATGTTTTCTTGTAGTTTTCTTTCTTTTATGATGGACTGCTTTTCCACTTTTTGCTTAATGAATCTTGGCAGGTCAATATTGCTTTATGGCCACGTTTCAAGATGGTCTTTGACTTGCACCTCCACAGCCTGCGAAATGCCAATATCAGGACTCTCTGGGAAGATGATGTTCACCCACATTATGTCATAAGGCGCTATGCTGAGTTTTCTGCGTCCCTTATTCACCTTAATGTAGAATACAAAGATGGCCAGGTTGGAGAATGTGAAGGTCCACTCTTTACTTTGTGGTTTACTTGCACTAGACTGGCTTTCATACTTGTTGCTAATTTTTGTAGCTTGAACTGAATCTGGAGAGACTCAGAATGGCTGTTGATGACTTGCTTGTCAAGCTATCACAAATGTTTGCTAAACAAAAGTTGCAAACAGTATTCCTTATAAACAACTATGACATGATAATATCGGTTCTGAAGGTAAGAAATTACTATAGTTTTTTATTCTCTGATAAACAATAAATTAATCATGAAAAGTGCAAGTCATTGTTGTGGATTTATATGGGTAATGCTCATATGCTAGTTGGATAAATGTCCAACGAAAGAAAGATGAATTATAAAGGAAAATGGGGGTCTATCTGACAATTTCCCTGGTCACCTTGTCTGTCAAATGAAAAGAGATAAGGAAGTCATCATTCCTGTTCTTATTACAGTGCAAATCTGGATAGTGCCGCTGATTACTTTACTCCAAAATTTAGCAAACCATTAACTGTAAGGGTAACAATATTGACTGTTTCCTATCTCAACATTTGACGCCATTGTTAGCAGATTTTATACAAGTTAGAAGTCTAAATTATATTAACATTTAATACTAGAAAATATAGAACACGAAATAATCTTTCATTTGCTTCTAGGAAGCTGGTCCAGATGGCGGGAAAATCCAGCAGCACTTTGAGGAGCTTCTAAAGAATAACACAGCCATATTCGTGGTGAGCACACTATTCAAGTCTTGCATTCCAAGAATGTTGAATTGATTATAGTTATGTTTCTCCGACAAACACCAAGCCCACTTTTTCTATTATTGCTTGACTGTGAGTTTCAGTTAGAACGAACCAATAACACAAAGTTCATCTATATTTTTGTGAGTGCTTGATTTCAAGAGGAATATTTGGTGTTGATTGCAACCCTAAATAGTGGATGCATTTTCCTAGATGAGTATTCTCATTGCGGATGTAATAAGTGTGGATTTATAATCAACGTTAAATTAACATCCGTAGGAGAGCTCTTGAATGATTTTCAACTCTCTTCTTGATTGTACAAATATACCAGCCTTTTTAACAACTATAAACTTCAGTTGAACGGTTTGTTCTTATATTTAATTTTATTGCAGGAAGAATTGCTGTTGGAGCATTTTAACGATCTCATCAAATTTGTAAAGACGAGAGGGTGTAAGTGTTAATGCTATGCATGTCTGTTTATCTCAAGCCTTCTGAAATGCCCTGATTATTATCTTATTGCAGCTGAGGATCCAAGTACTGGCACTGAAAGACCTATAACTATTGCTGAAGTTGAGCCGATTGTAAAGGACTTTGCAAGCAGATGGAAAGCTGCCATTGAGCTTATGCACAATGATGTGATTACTTCTTTCAGCAATTTCCTGTGTGGTATGGACATTCTAAGAGCTGCATTAACTCAACTTCTTCTCTATTATACAAGGCTTTCAGATTGTATAAAGAGGATAAATGGTGGTTCTACCTTGAACAAGGATCTTGTTTCAGTTTCATCGATAATGTATGAGATCAGAAAATACTCGAGGACTTTCTAGGACATTTTTCTCTTTTCAAGTCCGTATTACAGTCTCTTGAATTTGTATTTACCTATAAAAGAATTTCAGTTGACCATCAC---------------ATTGTTATTCACATTTTGTAAGATTGTATTGACATTTTCTGCAACTTATTAATGTGTGTAATAATCTTTATGATACTATTTATAATTCGGGCTTTCACTTTCAGCCCGATGGTGATCACTTTTACGC</genome_strand>
        <mrna_strand>ACTTTTTTCCTATTCAGAGAATTAAATCCCAATCTCGAAATTTCAGATCTCTTCTTGGCTCTTCACGGCTATCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTTTGTATATTACTACAACAGTACATTTACAATAAGATCATTTTACTCTGAAGACCTCCAAGATCATTTCCAGAACATCATCACAAAGCGGTTTTTTTTTTTTTCAGAGAATCAAATCCCAATCTCGAAATTTCAGATCTCTTCTTGGCTCTTCACGGCTATCAGATAGCTGTACGGTGTAGATCAGTAGAAAGTTGTTGGTTTGCTCTAGTTGCTATGGTGGATGTGGCTGGCAACACGTCG..................................................................................................................AAAACCTCCTTGGATTTGGGATCCTTCGTTGGCGATTTGAATGTTGATGATGAAACTGCCAG..............................................................................................................TGATGATATATCCCTTGAGGGACTCGAGGAAGAGTTACAGGAATGTCAAGCTGATGAT......................................................................................................................................................................GTTGTCGCAAACATACTTTCTAAAGGTACAACGTTGCGGGAATACACTAAAGGCGTTGAAAATAATTTACGTCAAGTCGAATTGGATTCTATCCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACATAAAGGAAAGTGATAATCTCGTCTCACTTCATGATCAAATTCGTGATTGCGACATGATTCTATCACAGATGGAAACTCTTCTCAGTGGATTTCAG..............................................................................................................................................................................................................................................................................................................................GCAGAGATAGGTTCTATAAGTTCAGATATCAAAATTCTCCAAGAGAAGTCTATGGATATGGGAGTGAGGCTGAAGAATCGCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCAGAGTCAAAGTTGGCAAAGTTTGTTGAAGATATTATTGTTCCTCCAAGGATGATTGACATAATTGTTGATGAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAATGAGGAATACATGAGGACCCTTGAAATTTTGAGTAAAAAACTGAAGTGTGCAGATGCAGATCCCACAGTTAAAACATCAAAAGCCCTGAAAGATGTGCAGCCTGAGCTAGAAAAACTTCGGCAGAAAGCTGTCTCCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTGATTTCATGGTTCAGAAGCTATACGCTTTAAGGAAGCCCAAAACTAATATCCAGATCCTTCAGCAGAGTGTCCTCCTAAAATATAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATCCTTTCCTTTCTCAAGGAGCATGGGAAGGAAGTGTATCTTGAGGTTCGAGCTGCATATATTGACACAATGAACAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGAGTGCACAGTTCCGCGCTTATATTCAAGCTTTAGAAAAGCTTCAGTTGGATATAGCAACATCTAATGATCTGATAGGTGTTGAGACCAGAAGCACAGGTCTTTTTTCGAGAGGAAGAGAACCATTGAAGAACAGGTCTGCAGTTTTTGCTCTTGGAGAAAGGATAAACATTCTCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTGAGGAACCTCCATTAATTCCACATATTGCTGAAGCCAGCTCAAAAAAATATCCGTATGAGGTCCTTTTCAGGAGTTTGCACAAGCTGCTCATGGATACTGCTTCTTCTGA............................................................................................................................................GTACCTTTTCTGTGATGATTTCTTTGGAGAACAGACCATGTTTCATGATATTTTTGCTG............................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGTTTTCAGTAATTGATGAGCATTTCAGCACAATTCTTCCTAATAGTTTTGATGCAATTGGCTTAATGCTCATGATTCGCATCATACACCAGCACCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTAATGTCCAGGCGCCGAATTCCATGCCTGGATTCATACTTAGACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATATTGCTTTATGGCCACGTTTCAAGATGGTCTTTGACTTGCACCTCCACAGCCTGCGAAATGCCAATATCAGGACTCTCTGGGAAGATGATGTTCACCCACATTATGTCATAAGGCGCTATGCTGAGTTTTCTGCGTCCCTTATTCACCTTAATGTAGAATACAAAGATGGCCAG...................................................................................CTTGAACTGAATCTGGAGAGACTCAGAATGGCTGTTGATGACTTGCTTGTCAAGCTATCACAAATGTTTGCTAAACAAAAGTTGCAAACAGTATTCCTTATAAACAACTATGACATGATAATATCGGTTCTGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTGGTCCAGATGGCGGGAAAATCCAGCAGCACTTTGAGGAGCTTCTAAAGAATAACACAGCCATATTCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAATTGCTGTTGGAGCATTTTAACGATCTCATCAAATTTGTAAAGACGAGAGGGT........................................................................CTGAGGATCCAAGTACTGGCACTGAAAGACCTATAACTATTGCTGAAGTTGAGCCGATTGTAAAGGACTTTGCAAGCAGATGGAAAGCTGCCATTGAGCTTATGCACAATGATGTGATTACTTCTTTCAGCAATTTCCTGTGTGGTATGGACATTCTAAGAGCTGCATTAACTCAACTTCTTCTCTATTATACAAGGCTTTCAGATTGTATAAAGAGGATAAATGGTGGTTCTACCTTGAACAAGGATCTTGTTTCAGTTTCATCGATAATGTATGAGATCAGAAAATACTCGAGGACTTTCTAGGACATTTTTCTCTTTTCAAGTCCGTATTACAGTCTCTTGAATTTGTATTTACCTATAAAAGAATTTCAATTGACCATCACATTTTGTAAGATTGTATTGTTATTCACATTTTGTAAGATTGTATTGACATTTTCTGCAACTTATTAATGTGTGTAATAATCTTTATGATACTATTTATAATTCGGGCTTTCACTTTCAGCCCGATGGTGATCACTTTTACGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588169" ref_strand="+" ref_description="SGN-U588169 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|218193052|gb|EEC75479.1| (e_value=4e-44) hypothetical; (*ATH) AT1G71270.1 (e_value=2e-43) | Symbol: None | Vps52/Sac2 family protein, similar to SP:P39904 SAC2 protein {Saccharomyces cerevisiae}; contains Pfam profile PF04129: Vps52 / Sac2 family | chr1:26867257-26873677 FORWARD | Aliases: F3I17.8, F3I17_8; (*SWP) sp|Q8N1B4|VPS52_HUMAN (e_value=5e-12) Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens GN=VPS52; ">
      <seq>gcttaatgctcatgattcgcatcatacaccagcaccagctgagaatgttcaggcgccgaattccatcaatggattcatacttagacaaggtcaatattgctttatggccacgtttcaagatggtctttgacttgcacctccacagcctgcgaaatgccaatatcaggactctctgggaagatgatgttcacccacattatgtcataaggcgctatgctgagttttctgcgtcccttattcaccttaatgtagaatacaaagatggccagcttgaactgaatctggagaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="58413" stop="55718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58113" g_stop="58076" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58075" i_stop="57045" i_length="1031">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.972" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57044" g_stop="56994" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="89" r_length="51" r_score="0.863"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56993" i_stop="56302" i_length="692">
            <donor d_prob="0.996" d_score="0.86"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56301" g_stop="56122" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="269" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56121" i_stop="56039" i_length="83">
            <donor d_prob="0.395" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56038" g_stop="56018" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="290" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U588169" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58113" e_stop="58076"/>
          <exon e_start="57044" e_stop="56994"/>
          <exon e_start="56301" e_stop="56122"/>
          <exon e_start="56038" e_stop="56018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTAATGCTCATGATTCGCATCATACACCAGCACCAGGTATATCCCTACACTTCTGTTCTCGTATTAAATTTCAAAGCAAACACAGCTAGTATTAGAATCCTATAAGAGGAAATTTGTGTATGGGTGAAGTTCCAAGGTTCACTTGACCACGGTTATCCAACAACAACATCAAAAAACTGGAGAAAAAGGGGTGTACGGGAGAAGAACAGAAGAAATCTGATTAGGTTTTACAGCATTGTTGATTCAAATCTGTCTTAAACCCAGCAGACACATGCCATTGTTTTGCGAAAAATTCCCAGAAAATATAGTAGGGAAACTAGATCTTTCTCATGACTCCAGTAAATGTTTGGCAGCAACTTCGAAAAGCAAGGATTGCTGGTCGATTTTATTAGTTGATTGACAGCTTTTAGTAAGTCAAGCTTGCTCTAGTTTTTCATTGTTTTGGCGTCTAAAGTATTGCATGCTGCAAAATTTGGGAGACACTAGAAGACTCTAAACTAAAGACAAAAAGATATCTGAAATACCCTTACGAATTGCTAAATTGACAACTAGTGCATTAATTTTTTCAAACTTATTCAAGTTAAACAATGTTATCCACTTGAGCTTTAAGTTCAGATCACTGTTGCACATATCATCTTCTTTATGCTAGTTATATTCATACATACTGCTAAAGAAAATTGTTTATTGGAATTGGAAGTATTTCAATGAAGTTAGTCTTTAGCTCAAAAGAAAACATAATAATAATTGAAGCGTATTGAGGTAAAAATGATTCACAACTGGGGAAATCTCAAAGATAAAAAGCAAATGAAATATGTCATTTCCTTCTAATCTTCTAAAGCGTATAGAAGTATAGCAAATGAAATATGTCATTTCCTTCTAATCTTCTAAAGCGTATAGAAGTATTTGATTATTAGAGAATTCATTGAGGAATCATGTGTTAAATGAATATGTGTAATGGTCCAATAGCATGCCAAATTTTGTTTATGAACTTGATATGAAATGTATTGTTATGGCCCTTAATTATTGCTGGAACCTTTTCTTATCGATGGACTGCTTTTATTTCCCAGCTTGTAATGTCCAGGCGCCGAATTCCATGCCTGGATTCATACTTAGACAAGGTACGTATCATTTAATTCACTTTACCACCAAGTCACCAGCATCAATGACAAATATCCATGTTCCTGCCTTCTGCACATGCATGTGAGCTATTTGTGTACAAGTGAACTTAAAGAACTTGCTGTAAATTTCACCAGATACTTATTCACCTGTTGCCTTGTAATGTATGTTCTTGTGTATTTTCCCATTTGTTGCTACTGTGTTGTGGAAAAAGGACAATTGCACAAGCATATCTAGGACTGCAGGGTTTCCTGTTCCGAAAGTATGTAATTTATCAATTTGGGATAAAATTAATAATATTACTATGTTGTGGAAAAAGGACAATTGCACAAGCATATCTAGGACATGCAGGGTTTCCTGTTCCGAAAGTATGTATAGTATAAATTTGGGATAAAAATTTTCATCTTTTGATTCATGATGTTTGGCTAGATACATAACTTCAGCAAAAAGAGAATTAAAACAGTTTGCTAATTGAATATGTTCAGGTGACCATTTCAAAATGAGAAATAAGGAATTAAGATTCATAATTATAGAAAGTTCAACAAAGGTGAATATAAATGTAAAACAACTCCTTAAGGTCTTTAGAAAGTTCAACATGATGATGACATTGGAACCAAAATAAAATGTTTTCTTGTAGTTTTCTTTCTTTTATGATGGACTGCTTTTCCACTTTTTGCTTAATGAATCTTGGCAGGTCAATATTGCTTTATGGCCACGTTTCAAGATGGTCTTTGACTTGCACCTCCACAGCCTGCGAAATGCCAATATCAGGACTCTCTGGGAAGATGATGTTCACCCACATTATGTCATAAGGCGCTATGCTGAGTTTTCTGCGTCCCTTATTCACCTTAATGTAGAATACAAAGATGGCCAGGTTGGAGAATGTGAAGGTCCACTCTTTACTTTGTGGTTTACTTGCACTAGACTGGCTTTCATACTTGTTGCTAATTTTTGTAGCTTGAACTGAATCTGGAGAGA</genome_strand>
        <mrna_strand>GCTTAATGCTCATGATTCGCATCATACACCAGCACCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGAATGTTCAGGCGCCGAATTCCATCAATGGATTCATACTTAGACAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAATATTGCTTTATGGCCACGTTTCAAGATGGTCTTTGACTTGCACCTCCACAGCCTGCGAAATGCCAATATCAGGACTCTCTGGGAAGATGATGTTCACCCACATTATGTCATAAGGCGCTATGCTGAGTTTTCTGCGTCCCTTATTCACCTTAATGTAGAATACAAAGATGGCCAG...................................................................................CTTGAACTGAATCTGGAGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601800" ref_strand="+" ref_description="SGN-U601800 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15232101|ref|NP_189349.1| (e_value=8e-28) hypothetical protein [Arabidopsis thaliana]; (*ATH) AT3G27130.1 (e_value=7e-30) |; ">
      <seq>gggaaaggaggacagcaacaaaaatacggcaccgaattcgaaatcggagaaaatggaggacgaaaaatcggaggcatcatggaggaaagaagttgacaccaatgtcaagaggcttcattccatgctatttggagcagaagtagctctcaaaagtaaggatttcagttctgcaacggtacttggactaggacttatcggattcctcgattcccattctcattcagacgccgacgaggctttcattcgtcctattcgttgtgaagctatgtcaaattttgattctgctcgaagctccctcataactgaatccgatcgccacgcttttgaacaagcagggagagatccaggctgcatatttgcccaaggaaaaaatattgacattgagaagattaagcagtctaaatactttctttctctttgtcagcaacatgaagacacagttaaaggtgaacagggaaatcaattaaacagacatgccaatgtgggtagccaaaccttgaaaacacctgtacatactagtccaagagatttctccttgataaaaaatagaagctttgcaaatgatagtagcccagaggttcttcctgttgataggtttcacccaaagcatagctacccaaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="74407" stop="76970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74707" g_stop="75021" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75022" i_stop="76151" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76152" g_stop="76290" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="454" r_length="139" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76291" i_stop="76500" i_length="210">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76501" g_stop="76670" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="624" r_length="170" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U601800" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74707" e_stop="75021"/>
          <exon e_start="76152" e_stop="76290"/>
          <exon e_start="76501" e_stop="76670"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAAGGAGGACAGCAACAAAAATACGGCACCGAATTCGAAATCGGAGAAAATGGAGGACGAAAAATCGGAGGCATCATGGAGGAAAGAAGTTGACACCAATGTCAAGAGGCTTCATTCCATGCTATTTGGAGCAGAAGTAGCTCTCAAAAGTAAGGATTTCAGTTCTGCAACGGTACTTGGACTAGGACTTATCGGATTCCTCGATTCCCATTCTCATTCAGACGCCGACGAGGCTTTCATTCGTCCTATTCGTTGTGAAGCTATGTCAAATTTTGATTCTGCTCGAAGCTCCCTCATAACTGAATCCGATCGGTACACTTCTTTTCTAATTTATGGTTTATATTTTTGTAATTACTTTAAATGCTAGTAAGTAGATGTTCAGTAATTGATGTCTGAATTTCAACCATAAACTAGATGCTGTGAATTTGGTCTCCGTCAGTCGTTTGGACGGACTGTAGTATTTGCATGTTATACAGTATATTTTTTCCTTCACTGTAAGCTACTTTGAGAATATAGACTAAAATGAACGCGTGAATTTGGAGGTTAGTTTCCGACTTTAAATATTATATTGCTCTATTTTGATTTCTCAAAAGGCATTTTGATGCAATTTAGTTCTCATCTCATGATTGTGTGTCATTTCAGAGATTTCAGGAAAGATGCTTCAGTTTCTTTTGAGCTAACTTTAATTAAATTTTCTGTTAGCAATGTTAAAAGTTTTAAAATATTGGCGCGGTTAAGTAAAATTGAGGAGAAAACATGAAGAATGATGTGATCTATTTTACCTGTTAATCTATGTCTGTTAGCCTAGCAAAAAACTTTTGAAATATTAACATGGTTTAGTAAAATGAGGCAAAACATGAAGAATGATGTGATTCTATTTTTCTTTTTAATCGAATTTTCTGCTAGCCTTGGAAAAACTTTTGAAATATCAGCATGGTTTAGTAAAATTGATGGGAAAACATGAAGAATGATGTGATTCGATTTTTCCTTTTAATAATATTTTTTTGTTAAGACTTGCAAAACTTTTAAAAAATATCAGCAGGGTTTAGCAAAATTGAGGAGAAAACATGAAGAATGACGTGATCCTTTTTTTTCTTTATTCTCTTTCATTTTAAAAAGCTTTCATTGGTCAAACAAACCAACAGTAAATTGGTTAATTCTAAATAAAGAGTCAATTGAGGTATATTGTTATTTTTCTTCCATGAAGTATTATTCATCTGAGAAATATGCATTACTTCAATTGCATCATTCATTCTTTTCTCATAGCTCGAAGACAAACTGAACAGTACAAGTATTTCCTTTTTTCTTGTTTACAATTTTGAACCTGTAAGAATCATTTTGTTCATCATTTCGCGATTCACTCATATTAGCAATACAAATAATTCGATGAACCAATCTGTTCTTACATGTTGAAGTTGCTGATCTTTGCTATATATCTTCAGCCACGCTTTTGAACAAGCAGGGAGAGATCCAGGCTGCATATTTGCCCAAGGAAAAAATATTGACATTGAGAAGATTAAGCAGTCTAAATACTTTCTTTCTCTTTGTCAGCAACATGAAGACACAGCTAAAGGTGAACAGGTGTGTGGACTAATAATTTGATTATTTCCTTTTTTCTTTTCTATCACCAGCACTGAGAATCTTATTTACATGCTTGTTTTTTCTTTGGTTTTCCCTTTTTTTTGAATTCGCTATATCTATAAAAACTAAATTCAAGTTACTTCATTGTTTGTGAATAAAGAGTGATCGTTTTGAGGATACGTGAAGTCATTTGAAGTGTATATCTTGCAGGGAAATCAATTAAACAGACATGCCAATGTGGGTAGCCAAACCTTGAAAACACCTGTACATACTAGTCCAAGAGATTTCTCCTTGATAAAAAATAGAAGCTTTGCAAATGATAGTAGCCCAGAGGTTCTTCCTGTTGATAGGTTTCACCCAAAGCATAGCTACCCAAAGCA</genome_strand>
        <mrna_strand>GGGAAAGGAGGACAGCAACAAAAATACGGCACCGAATTCGAAATCGGAGAAAATGGAGGACGAAAAATCGGAGGCATCATGGAGGAAAGAAGTTGACACCAATGTCAAGAGGCTTCATTCCATGCTATTTGGAGCAGAAGTAGCTCTCAAAAGTAAGGATTTCAGTTCTGCAACGGTACTTGGACTAGGACTTATCGGATTCCTCGATTCCCATTCTCATTCAGACGCCGACGAGGCTTTCATTCGTCCTATTCGTTGTGAAGCTATGTCAAATTTTGATTCTGCTCGAAGCTCCCTCATAACTGAATCCGATCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGCTTTTGAACAAGCAGGGAGAGATCCAGGCTGCATATTTGCCCAAGGAAAAAATATTGACATTGAGAAGATTAAGCAGTCTAAATACTTTCTTTCTCTTTGTCAGCAACATGAAGACACAGTTAAAGGTGAACAG..................................................................................................................................................................................................................GGAAATCAATTAAACAGACATGCCAATGTGGGTAGCCAAACCTTGAAAACACCTGTACATACTAGTCCAAGAGATTTCTCCTTGATAAAAAATAGAAGCTTTGCAAATGATAGTAGCCCAGAGGTTCTTCCTGTTGATAGGTTTCACCCAAAGCATAGCTACCCAAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603299" ref_strand="+" ref_description="SGN-U603299 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147766680|emb|CAN60755.1| (e_value=1e-103) hypothetical; (*ATH) AT3G27120.1 (e_value=3e-100) | Symbol: None | spastin ATPase, putative, similar to SWISS-PROT:Q9QYY8 spastin (Fragment) (Mus musculus); contains Pfam domain, PF00004: ATPase, AAA family | chr3:10000931-10003372 REVERSE | Aliases: MOJ10.20; (*SWP) sp|Q8BPY9|FIGL1_MOUSE (e_value=6e-60) Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1; ">
      <seq>atctccaggtcgaggtcttcttctgtttggtccaccaggaactggcaaaacaatgatagggaaagctattgctggtgaggcaaaagcaaccttcttttacatatctgccagctctttgacaagcaagtggattggagagggggagaagctggtgagggcactttttggagtggccagttgtcgtcaaccagctgttattttcgttgatgaaatagattctctgttgtctcagcgcaagtcagaaggtgaacatgaatctagtaggcgcctgaagacacaatttctgatcgagatggaaggctttgacaatgtgagcgaacaaattcttcttataggtgcaacaaacaggccccaagagcttgatgaggctgcaaggagacggcttactaaaagactttatgttccacttccttcctcagaagcacgagcttggattgccaagagtctattggagaaggatgggttgtttaagctttcagatgacgatattgtctctatttgcaaatttacggaagggtattctgggtctgacatgaagaatttagtgaaggatgcttccatgggtccattgagggaagctctaaggcacggtattgaaattacaaagctaaagaaagaggatatgaggccagtaactcttcaggactttgagagtgcattacaagaggttaaggccttctgtgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="78126" stop="81214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78426" g_stop="78462" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78463" i_stop="78542" i_length="80">
            <donor d_prob="0.917" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78543" g_stop="78635" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="130" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78636" i_stop="79152" i_length="517">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79153" g_stop="79254" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="232" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79255" i_stop="79837" i_length="583">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.377" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79838" g_stop="79940" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="335" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79941" i_stop="80216" i_length="276">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80217" g_stop="80300" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="419" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80301" i_stop="80381" i_length="81">
            <donor d_prob="0.622" d_score="1.00"/>
            <acceptor a_prob="0.708" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="80382" g_stop="80477" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="515" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="80478" i_stop="80617" i_length="140">
            <donor d_prob="0.003" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="80618" g_stop="80745" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="643" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="80746" i_stop="80872" i_length="127">
            <donor d_prob="0.704" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="80873" g_stop="80914" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="686" r_length="43" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U603299" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78426" e_stop="78462"/>
          <exon e_start="78543" e_stop="78635"/>
          <exon e_start="79153" e_stop="79254"/>
          <exon e_start="79838" e_stop="79940"/>
          <exon e_start="80217" e_stop="80300"/>
          <exon e_start="80382" e_stop="80477"/>
          <exon e_start="80618" e_stop="80745"/>
          <exon e_start="80873" e_stop="80914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCCAGGTCGAGGTCTTCTTCTGTTTGGTCCACCAGTAAGTTCTTAGTGCACCTGGTCAAGACAGGTTTAGAAGAAAGCAGTTTTCTTTGAACTTATAAATCTCTCATGCTTTAGGGAACTGGCAAAACAATGATAGGGAAAGCTATTGCTGGTGAGGCAAAAGCAACCTTCTTTTACATATCTGCCAGCTCTTTGACAAGCAAGTGGGTATGTCGTATTTTTGAATATTTATATTATTCTATGAAAACTGAAATATACTTGATCACTTTTCTCGAAAGAAAGGGAGGATGAAACCCCCAACCTACTGCAAGATATTTAACCATTATGTCCATCGTGATGAATAACGTAATGGGGACACCACTGTTTTTAAGCTACAAATTCATCTATTTTATCTCAAATCTTACAGGAAGAATAATCTCTTTGTAGGCAGCATAAACATTTTACCTTACGTACAATTCTATAGTGAGCAACTAGGTTTATGATATGAAATACCCAGTGAATAAACATTAAACTGGAGATCTCCCAAGTCATTTGGAGTCTTAGCTGGTATAGCTGTAAAATTTCATGTAATTCATACCTGGGAATTTGATAAGAAATGACAAGGAAATATAAGGATTACTATTATCTAGTGCATGAGACTTGCGTTACAGCTATCTTGTTCTAGATATCTATTTAAAGGTGGATGTAACTATCTTGGCAAATGATTTTGAATTCATGATTATAGATTGGAGAGGGGGAGAAGCTGGTGAGGGCACTTTTTGGAGTGGCCAGTTGTCGTCAACCAGCTGTTATTTTCGTTGATGAAATAGATTCTCTGTTGTCTCAGGTACGTAACTCTCTGACACTTCAGTGTAAAGCGAATTTTTTTCCTTGGTGCATAATTTCTGCATACTGAATGGGATGCAATATTTGAAAAAGATCATATCTTGCAAATTGATTCCTTCCTTCATTTTCTGACAAATGGAATCAGAATTGTGTCTGAGTCATGTAGCGATGAGGAAAAAAAAACATGTATTGATGAGGAATTTATTTCTCTTGTCAACTCCTCAGCTAGCTGATGTTGAAATTGGTATTATACCTACTTTTGACTCCCTACTGATCCGGGACTTTTGGCATTTTCGAGAAAATAGTTATCACTGGGGGAAAAAGAAACAAAAGGACGACCCAAAACATAAAAAGAAATTACTTATAGTAAAGAATTCAGTGTTCTCTACTTGTGAATTTTTGAGTGATATTGTGGTTGAAAACTTGATAAGGCTGCAGTACAAGTTAGAAGGTAAGCAACAATAATTCATGTATACGTGCATATTAGAGAGTATATTTTTAGTTTTTGGCTGGACTTTACTTTTCCATAAGCTGATTGCCAAGTAGGGATAGAGACCTTCCTGAAAGACTTTACATGGTTGCAGCGCAAGTCAGAAGGTGAACATGAATCTAGTAGGCGCCTGAAGACACAATTTCTGATCGAGATGGAAGGCTTTGACAATGTGAGCGAACAAATTCTTCTTATAGGTGATTTCTAAATCCCTCTACACTTCAGCATGTTAAGAGAGAAGCAGATTCCCATTTAGAAACCACGTAACATTCCAATCACAAACCTATGCAAGTCAAAAGTTTTCTTTGTTTTCTCAAGAGGGGTATGCGTGGTGGATGAATCCATGTGGTGTAGTTTGTATACTGGGCAATCAAATGAGAAATTTAAATCTGCCAGTTTCCTTTTTACTGCAGAAAAATATTTAACTTAGTTACTAGCAGAAGAAAATTTGAATACATTATTCATGGAAACAGGTGCAACAAACAGGCCCCAAGAGCTTGATGAGGCTGCAAGGAGACGGCTTACTAAAAGACTTTATGTTCCACTTCCTTCCTCAGGTGCAAGCTTGAGCCTCATTTTTAAGAATTAGGAATGGAATACTGTGACCAGTATTGTTGACCATATATCTTGGAATACAGAAGCACGAGCTTGGATTGCCAAGAGTCTATTGGAGAAGGATGGGTTGTTTAAGCTTTCAGATGACGATATTGTCTCTATTTGCAAATTTACGGAAGGTATTCACAACTCATGTTGCGAACATTCAAAAACCTCAAGACTCATCTGATGAAGTCGTAGTTTTGTCCATCGTTCCTATTTCTCTTTCTTCCTTTTATTTGTGAAATTCTTATTTATCATGTTTTGCTTAAATTTTCAGGGTATTCTGGGTCTGACATGAAGAATTTAGTGAAGGATGCTTCCATGGGTCCATTGAGGGAAGCTCTAAGGCACGGTATTGAAATTACAAAGCTAAAGAAGGAGGATATGAGGCCAGTAACTCTTCAGGTAATTTGCAGGCACGCAAAAACAGCAATAGTTAGATGCTGTTAAGGAAACAAATGAAAGAACTACTCAGTTGCATCTAGTCCGTAATTTTCTCATCACAGCATTTTCAATATGTTGTTTTGCGCAGGACTTTGAGAGTGCATTACAAGAGG-TAAGGCCTTCTGTGTCT</genome_strand>
        <mrna_strand>ATCTCCAGGTCGAGGTCTTCTTCTGTTTGGTCCACCA................................................................................GGAACTGGCAAAACAATGATAGGGAAAGCTATTGCTGGTGAGGCAAAAGCAACCTTCTTTTACATATCTGCCAGCTCTTTGACAAGCAAGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGAGAGGGGGAGAAGCTGGTGAGGGCACTTTTTGGAGTGGCCAGTTGTCGTCAACCAGCTGTTATTTTCGTTGATGAAATAGATTCTCTGTTGTCTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAGTCAGAAGGTGAACATGAATCTAGTAGGCGCCTGAAGACACAATTTCTGATCGAGATGGAAGGCTTTGACAATGTGAGCGAACAAATTCTTCTTATAG....................................................................................................................................................................................................................................................................................GTGCAACAAACAGGCCCCAAGAGCTTGATGAGGCTGCAAGGAGACGGCTTACTAAAAGACTTTATGTTCCACTTCCTTCCTCAG.................................................................................AAGCACGAGCTTGGATTGCCAAGAGTCTATTGGAGAAGGATGGGTTGTTTAAGCTTTCAGATGACGATATTGTCTCTATTTGCAAATTTACGGAAG............................................................................................................................................GGTATTCTGGGTCTGACATGAAGAATTTAGTGAAGGATGCTTCCATGGGTCCATTGAGGGAAGCTCTAAGGCACGGTATTGAAATTACAAAGCTAAAGAAAGAGGATATGAGGCCAGTAACTCTTCAG...............................................................................................................................GACTTTGAGAGTGCATTACAAGAGGTTAAGGCCTTCTGTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581608" ref_strand="+" ref_description="SGN-U581608 Tomato 200607#2 [70 ESTs aligned] (*GB) gi|114186917|gb|ABI53846.1| (e_value=0) sulfite; (*ATH) AT3G01910.1 (e_value=0)  Symbol: None | sulfite oxidase, putative, similar to sulfite oxidase GB:3212610 SP:P07850 (Gallus gallus), Moco containing protein (Oryza sativa (japonica cultivar-group)) GI:22759584; contains Pfam profiles: PF00174: Oxidoreductase molybdopterin bi... ; (*SWP) sp|Q9S850|SUOX_ARATH (e_value=0) Sulfite oxidase OS=Arabidopsis thaliana GN=SOX; ">
      <seq>ggcgattggcggccaatcggccgaattcttcaagaacgttaaggcttcgctagtggaattggtacacacggtgaaatgaaataaacaataatccactgtggcaatcgaggcgacctcgacaaattatccacatcacaagtcacacagcaccgtttaatttccaattgcatgaagagtataacctgtctccacagcctcaaattcgtcaggtagtagggccgctccaatatttgtacaaatcttcttcatctacctcgcactcacacctagcaggactactgtgaagccggcggcaaaggaaactgagaaaatgcctgggattaaagggccttccgattattcgcgagaaccccctcgccatccttctcttaaaattaatgccaaggaaccctttaatgctgagccaactcgttcagctctgatttcatcttatgtcactcctgttgatttcttttacaagagaaaccacggacccataccagtagtggatgacatagagaggtattccgtttctctgagtggtcttataaaaaattccaaagacttgtttatgaaggatatttgtaagcttccaaaacatacggttactgccactttacagtgtgctggtaacagaagaactgctatgagtaagagtcgaacagtgaaaggagttggttgggatattgctgctttaggaaatgctgtttggggtggagccaaattggcagatgttctagaattagttggaataccttatttggcaagtatcacacaatctggaggaaaacatgtggaatttgtgagcattgacaagtgtaaggaggaaaatggaggtccttataaggcatcaattccattgagtcaggctacaaaccctgaagctgatgttctgctcgcttatgagatgaatggagagccacttaatagggatcatggctatccactgcgtgtggttgtccctggtgtgataggtgcccgttcagttaagtggcttgattccatcaatatcattgccgaagaatgcaagggattctttatgcaaaaagactacaagatgtttccaccaacagtgaattgggataacatcaactggtctactaggagaccgcagatggactttcctgttcagagcgcaatatgttccctggaggatgtgagtgttgtaaagcatggaaagataaacatcaaggggtacgcattatcaggaggtgggcgtggcatagaaagggtagacgtgtctatagatggtggtaaaacttgggaggaagccaccagataccagagaactggtgttccatatattgctgatgattcaagcagtgacagatgggcatgggtcttttttgaagctgaggcaaatattccccagagtgcggaaatagttgctaaagcggtggatatatctgcaaatgtccaacctgaaagtatagattctgtctggaatctgagaggaatcctgaacacctcatggcatcgggttcatgtccgagttggtcaagcaaatctttaggctgtgtttggtgtgttgaagcggatgacagtaatcagcatatcaggccatggttgtttgtatccttcttagcttaaaatgaaaatagcatggtggtttgcgtcttcctagcttaaaatgaaaataaaatgttctcttgatgttgtctcgaaatacttacggaaataataataatttggaagtgattgcatcttgacaattaattgtgttagtttcttctccagtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="97792" stop="90264"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97471" g_stop="97148" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="385" r_length="324" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97147" i_stop="96908" i_length="240">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96907" g_stop="96792" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="501" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96791" i_stop="96702" i_length="90">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.470" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96701" g_stop="96639" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="564" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96638" i_stop="96550" i_length="89">
            <donor d_prob="0.582" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96549" g_stop="96513" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="601" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96512" i_stop="96326" i_length="187">
            <donor d_prob="0.982" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96325" g_stop="96244" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="683" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96243" i_stop="94363" i_length="1881">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="94362" g_stop="94244" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="684" r_stop="802" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="94243" i_stop="94108" i_length="136">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="94107" g_stop="94012" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="803" r_stop="898" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="94011" i_stop="93016" i_length="996">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.302" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="93015" g_stop="92905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="899" r_stop="1009" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="92904" i_stop="92827" i_length="78">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="92826" g_stop="92725" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1010" r_stop="1111" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="92724" i_stop="91597" i_length="1128">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="91596" g_stop="91549" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1112" r_stop="1159" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="91548" i_stop="91326" i_length="223">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="91325" g_stop="91110" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1160" r_stop="1375" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="91109" i_stop="90909" i_length="201">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="90908" g_stop="90564" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="1376" r_stop="1720" r_length="345" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U581608" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1659</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97471" e_stop="97148"/>
          <exon e_start="96907" e_stop="96792"/>
          <exon e_start="96701" e_stop="96639"/>
          <exon e_start="96549" e_stop="96513"/>
          <exon e_start="96325" e_stop="96244"/>
          <exon e_start="94362" e_stop="94244"/>
          <exon e_start="94107" e_stop="94012"/>
          <exon e_start="93015" e_stop="92905"/>
          <exon e_start="92826" e_stop="92725"/>
          <exon e_start="91596" e_stop="91549"/>
          <exon e_start="91325" e_stop="91110"/>
          <exon e_start="90908" e_stop="90564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACACACGGTGAAATGAAATAAACAATAATCCACTGTGGCAATCGAGGCGACCTCGACAAATTATCCACATCACAAGTCACACAGCACCGTTTAATTTCCAATTGCATGAAGAGTATAACCTGTCTCCACAGCCTCAAATTCGTCAGGTAGTAGGGCCGCTCCAATATTTGTACAAATCTTCTTCATCTACCTCGCACTCACACCTAGCAGGACTACTGTGAAGCCGGCGGCAAAGGAAACTGAGAAAATGCCTGGGATTAAAGGGCCTTCCGATTATTCGCGAGAACCCCCTCGCCATCCTTCTCTTAAAATTAATGCCAAGGTTACTCTATAAACTTCCCTGTTTCTTCATTCTTTTGCCACTGTATAGATCGCTGCAATTAAGTTTTCCAATTATCTGAATCCTCAATATTTCAGAGTTAAATGGTAGTTATTCCGATGTTTATGAATCAAAAGATATTCATTTTTGGTGGAGTTTCTATTGCGATTTTCTGCTAATTTGTTAAGACTATCTGCTGATCGAATCGTTACGGGAATTGCCGATTATCAAATTTTGTTGTAGGAACCCTTTAATGCTGAGCCAACTCGTTCAGCTCTGATTTCATCTTATGTCACTCCTGTTGATTTCTTTTACAAGAGAAACCACGGACCCATACCAGTAGTGGATGACATAGAGAGGTTTTATACTTTGGTTTGTTTTTGTAAAATCCTTTCATGTTTTTTTTTTCTTAGAGCTTTCTTGCTGATAGTGCTTGGCCCGTTCTTCAGGTATTCCGTTTCTCTGAGTGGTCTTATAAAAAATTCCAAAGACTTGTTTATGAAGGATATTTGGTGAGGATACTGCAGACCTTTACATCAATACTTCAATTTTCATGTAATTCTCTCAAATGATTGATGTTTTTTTGGTTTATAAATAACAGTAAGCTTCCAAAACATACGGTTACTGCCACTTTACAGGTAAATTATCATGCTCTGACTCCAGATTGTTGTGTTTGTTGCTGGGACAGAATTGTGGATTGGGATATGATAAATTTTGAAAAAGAAATTTTTGGGCCATATCTTATAAAATTCTCACGAGGGGAATGTGCACTGCTGTTGATCATTCAGCTATTTTGCAAAACTAATTTGGTTAATTCTTGTCTAGTGTGCTGGTAACAGAAGAACTGCTATGAGTAAGAGTCGAACAGTGAAAGGAGTTGGTTGGGATATTGCTGCTTTAGGAAATGGTAAGTTGATTAAACCTGCAGTGCATTCATCATTTAAATGCTTGGTCTGATATCTAATTCTCATATACTACTGTAGAGAACTTGAGAAATAAACTAGATTGGATGGAGAAGTCGCAAGTTCAACATGTTTATGCTAGAAAGTTTCCATTTCCGTTCATTATCTGCATGTGATCACGTATACACGCTCTTCTCTAAGTAGCCAAAGATAATTTGGAGATTATTAGAGTGCGCTAAATTCTGCTAATGCATTTCTGTTCAAGTCTAGAAGAGTTAGTACTACACTACCATACGCATAGAGTAGTCTTTTTTTTCTCTGTTTCGTTGCATCCTTGGATTGACAAGGAGACTACCAGTTTAAGTAGCCAAAGACAATTTTAAGATTATTAGAGTGCGCCAGATTTCTGCTAATGCAATTCTATTTAAGTCGAGAACAGTTAGTACTGACATTATAGAATTAAAGGGCCTTTGCTTGGTAAACTTACTACACTACCGTACACATGCTGTAGTTTTTTTCTCTGTTTTATTCCATCCTTGGATTGAAAAGGAAACCACCATCAAGCCCCTTTGTAGCTCCCCAACATTACTTTTGACTTGGTAAATGTGATTGCTTTAACTGATTTGTATGTGTCGTTCCCTTTTTCTTCTACTTCTGAGAGGTTTCACAATATATCTACATGTCTCGCTGCTGGTATGTTTATAATTTAATTGACTTACTAGTTTGTTTGTTTGTCACTCGCTTATTTGGTAAGTTCTCCTTTGAGTATGTAGAGTCTCAACTCTCATGTGAGTATGACTTTACTAATGTAATTGTAATGTTACTGACCCATGAAATCAATTTTTGAAAGAATTCATTTGAAAAAGAGTTCATTAGAAGAACTTTAATCATGTCCTACCTTTCTACTCATGTGTATTACAAATGAGGGGTTTGTTTTTTACTAGCATTTAATGAGATTCCTCTAAAAAAAAATTCATGGGCCTGTATAATACTCCCTCCGTCCTTATTTATGTGGCAACGTTTGACTTGACACAACAACTATTTAACATAGGAACCAAAGCTTGTTCCAAGGTAATCAAGTTCACTCTACTCCAGTAATGTGTGATGTTCCTGCTTGTGGTCTTCATATTTATTTTTTTCCGAAAATTTTTGACTGATTATTTCAATGTTCACCCATTACTTGTATAATAAATGAGTCAAATTAACATTTTATGCTTAATTTGACATAGGTAAAAGAAAAAAAATCTATACATACTCAAAATATAACACATGTATTGAGACAGATGGAGTAATAAGTTGTGGAACTTGTAATGATTGAGTGAAAAGAGTATATGAATTCATTATATTGTGAATTTGGTAAAGAATTAAATAAACCATTTGCATCTATCTGACAGAAAATATATATAGGATATAATGTTTCCTAGCCACGGATTCATCTGTTTCGCATTCTGCACCTGGTATGATTATTTGCTTTGGTAATGAAAAGAACAATGGTTTCGGTCATGTATCTAATTCTACGGTGGAAGAGAAGGTTCCATTGGAACAATATTTGTTCAGTCAAGGGCTCCTCTCTCTTTTTTTAAAAAAAATTAATAAAGAAAAGAAGTTAGGGTATGAGAAGAAATGACAAGAAGGCGTTGGAATATAAATTTGGAAGAGATGACGAAGGCAGGAGTTAATACTTGGTTATGGTAACTGCCAAATGATTGGTATGAATTTTAAGTTATACTGATGCATTGCTCCCTCCACCAAAATCACTTTTTCCAGTTGATCTCTGTTAGGAGTTTTTTTGAGAAAAATGTCAAGTATAAAATGCTTCTTGATGCCTCAATTTATTAAAAATAAATTAATTTACATTTAACTTGTTACATCATTGTGCATTTCAGCTGTTTGGGGTGGAGCCAAATTGGCAGATGTTCTAGAATTAGTTGGAATACCTTATTTGGCAAGTATCACACAATCTGGAGGAAAACATGTGGAATTTGTGAGCATTGACAAGTGTAAGGTGATTATGTACGATATCTTATTCCTAGATAAAAAAAATGTTGTTTCTTTTTTCTCTTTTCTTCTTTACTTTTCTTTATTAGATATGTATACCTTGCTGTAAACTTCCTGTCTCAGCAATATATATATGAATCTAGGAGGAAAATGGAGGTCCTTATAAGGCATCAATTCCATTGAGTCAGGCTACAAACCCTGAAGCTGATGTTCTGCTCGCTTATGAGATGAATGGAGAGGTAATACAAATCTCTCTCTTCTATCTTTAATATAAATGTGTTTGTTTTCTCAGTTTGACCTATTTCCCTTATTCAGCTTTCCTAATAATGTAGTTTCTTTTACAACAACTACTAATCTCTGTATAATTTTCCTATTGTACACTTAAAAAGACTAAGTTTCTTGTGGGTCTGTATTTTCCCTTGTTAAATATCAAATAGTGCAGTTTATAAGTTTCTATACAGTTTGTTCAAAGTCAAACCAAGGAATCCAATTTGAAACTGTTGGAGAATTTTTTGTTATTTTTGGGTCTTGATGTGACATAAAATACCGCATTTTGTCACTTTTAAATCCAATATAACAAACTATTCAAAATGTTTGTCCTTCAATTCTAACTTTTTGGAGTTGTCTGGTTCACTGAGGGATGAGAATTGTGTTAAATTTGACTGTTTGACTTGAGTTAATAGTCATGTTCAGTGTGTCAATCAATTGTAATCGCGTGTATTGAATGCTGTGCCTATTATAATATCAAATGGCATCGTTGGTCAATTCTGTGTTTCAGATTTGTTGAGTGGAATTTTGTTAGTTTTGCTTCAGCTGGTTCTGAATTTATTTCCTCTTAAAATTATTGTCATGTATTTGGTCAAGTAGTCCATTAGACAGCAATCAATGGGAACAAAGAGGGTGATATCTGATTGGCAGAGAACTATACTTCTAATTGCATGTTGAGCCATCTTAACAAAAAGTGTTCTTTTTTAGCATAACGACAACAACATTCCCAGTATAATCCCAGAAGCGATGTGAGGTCTGGGGGTATTTTAAGCATGCTATTCTAAAATTATCTTTTGTATTTTTGTTTCTACACTGGATATCTTGGTAATGAGAAGATTAGTATTTTGAGTGTCAGCTTGGAAACTTCTGCTACACCCTTAACCCTTGCAATTTCCTTTTAAAACCTGATAAATTGATAGCTCAACTCGCAATATGCTATACTAACGTTCCTGGATTCACGTGTGAAGCCACTTAATAGGGATCATGGCTATCCACTGCGTGTGGTTGTCCCTGGTGTGATAGGTGCCCGTTCAGTTAAGTGGCTTGATTCCATCAATATCATTGCCGAAGAATGCAAGGTTGCTATTTATGTATTAGTACTTCAGATGATTTAACATTTTCTTTTAAACTTTTTTAACACAATATCTGCTGGACAGGGATTCTTTATGCAAAAAGACTACAAGATGTTTCCACCAACAGTGAATTGGGATAACATCAACTGGTCTACTAGGAGACCGCAGATGGACTTTCCTGTTCAGGTAATTGGTTAAATTTCTCCCCATCAGTAGGTTTTCATTGGGGGGTTCTTTTAGTGTTTTTTTAATATAGAATTGTCTTTCCTGTAAATAGGTAGATAGGTAGACTAGGAATTCAAGATTACAGGTTTGGGTGGCGTTTGCTTCAAAAATTTGGAAGCTTGTACTCAGAAAATCTTTTCAGATTTTTTGCTAAACCTTCTTTCGATTTTTGTGAAGCAAGCACCACCTTGGTCATTTTATTAATGAAATTTGTGAGATACCTGTGGATTGTGTTACCCCAATTTTCCAAGTTATGTGGTGTCTTTGTACTTGTGTGGAACTTTATTAATATCCGTTAATTTGGATGATGAAGAATTCATTATGTTTCCACAAAATACTGAAGCAGCTGTCCATTATGCTTCATGCTTTTCATGATTTTGCAACTGGCTAAAGGACTACCTCCCCTGGTTATTCCCAGGTTCTGAACTTGGAGATGATTAGGACCCACTTGGCCCATAGCTTCACTTGCAAATACTGAAGCAGCATTTGCAAGTTGAAGTTTGGCCATGAAGTTTTGAGTTCTAGTTGATGTTGATATTCAAGTGAAGTTTCTCAAATCTTCAACTTCCACTTATAAATATCAACTTTGCAAACTTTATTTTCCAACTTCCAACTTCAAATACATTTTTTTTTCAGTTTCAACTCATATTGTCCGAAAGAATGCTTAGTTTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACGGTTGGAGTAAAACGGTTGATGCATGTGTCCTAATTTGTTTGATAGAATATTGTAACCGGGTTTACGATTTGCAATAACACTATGTCAAAACTTCTCTTATCCTGTGTAATAAGTATTGATGTCCCTGCTATATGATATTATTGGAATTCTTTACATGATGGTTCTAGAAAGTAGAAAGCCTAGTGATTACTTTTAGAAGTGTCTATTTCCAGATCTGAGATGGTCCAACCAGCTAACTGCCTGTTGATCAAATGATTGATTGATCTGGCATGACTTTAGCATTTATATCTGGCTGGTAACCAACATGGCTTCACAACTTTTTAAATTTGTCAATTGCTGACAGTTACTTTATTCCCTTTCTGGTTACAGAGCGCAATATGTTCCCTGGAGGATGTGAGTGTTGTAAAGCATGGAAAGGTCAGTTTTAATATGATGAACATTTTGTGTTCAAGCATTTCTTGACATTTATCTTAATTCTTAAATGGACAGTTTTACATATACTTGTGTAAAGGAGTTTGCACGGTCTGGAAAAAAAAAAGAGTTTGCATGATTCAATTTAGTAGCCTTATTTTGTACTGTTGTAAGTAGAGAATCATGGGTACTTCATTAGGTTATTCTAGCGTCTGGTATTTGTTTTCAGATAAACATCAAGGGGTACGCATTATCAGGAGGTGGGCGTGGCATAGAAAGGGTAGACGTGTCTATAGATGGTGGTAAAACTTGGGAGGAAGCCACCAGATACCAGAGAACTGGTGTTCCATATATTGCTGATGATTCAAGCAGTGACAGATGGGCATGGGTCTTTTTTGAAGCTGAGGCAAATATTCCCCAGAGTGCGGAAATAGTTGCTAAAGCGGTAAGTTTTGAGTTAAAATTTGTCTGTTTTCTTAATTCTAATAGAAAAAAAAGGTTCAACTGTTAACTGCCACATTTTCTGACAACCCCATGATTTGCGCTATATGCATTAAGACGCTGCTTTCTCTGTTATCTTACACTGGAAGACACCAGTCTGCCGAATTTCTTGCTCCGTTCTGAGCTGATATTCTATGTTTAATAGGTGGATATATCTGCAAATGTCCAACCTGAAAGTATAGATTCTGTCTGGAATCTGAGAGGAATCCTGAACACCTCATGGCATCGGGTTCATGTCCGAGTTGGTCAAGCAAATCTTTAGGCTGTGTTTGGTGTGTTGAAGCGGATGACAGTAATCAGCATATCAGGCCATGGTTGTTTGTATCCTTCTTAGCTTAAAATGAAAATAGCATGGTGGTTTGCGTCTTCCTAGCTTAAAATGAAAATAAAATGTTCTCTTGATGTTGTCTCGAAATACTTACGGAAATAATAATAATTTGGAAGTGATTGCATCTTGACAATTAATTGTGTTAGTTTCTTCTCCAGTTTC</genome_strand>
        <mrna_strand>GTACACACGGTGAAATGAAATAAACAATAATCCACTGTGGCAATCGAGGCGACCTCGACAAATTATCCACATCACAAGTCACACAGCACCGTTTAATTTCCAATTGCATGAAGAGTATAACCTGTCTCCACAGCCTCAAATTCGTCAGGTAGTAGGGCCGCTCCAATATTTGTACAAATCTTCTTCATCTACCTCGCACTCACACCTAGCAGGACTACTGTGAAGCCGGCGGCAAAGGAAACTGAGAAAATGCCTGGGATTAAAGGGCCTTCCGATTATTCGCGAGAACCCCCTCGCCATCCTTCTCTTAAAATTAATGCCAAG................................................................................................................................................................................................................................................GAACCCTTTAATGCTGAGCCAACTCGTTCAGCTCTGATTTCATCTTATGTCACTCCTGTTGATTTCTTTTACAAGAGAAACCACGGACCCATACCAGTAGTGGATGACATAGAGAG..........................................................................................GTATTCCGTTTCTCTGAGTGGTCTTATAAAAAATTCCAAAGACTTGTTTATGAAGGATATTTG.........................................................................................TAAGCTTCCAAAACATACGGTTACTGCCACTTTACAG...........................................................................................................................................................................................TGTGCTGGTAACAGAAGAACTGCTATGAGTAAGAGTCGAACAGTGAAAGGAGTTGGTTGGGATATTGCTGCTTTAGGAAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTGGGGTGGAGCCAAATTGGCAGATGTTCTAGAATTAGTTGGAATACCTTATTTGGCAAGTATCACACAATCTGGAGGAAAACATGTGGAATTTGTGAGCATTGACAAGTGTAAG........................................................................................................................................GAGGAAAATGGAGGTCCTTATAAGGCATCAATTCCATTGAGTCAGGCTACAAACCCTGAAGCTGATGTTCTGCTCGCTTATGAGATGAATGGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTTAATAGGGATCATGGCTATCCACTGCGTGTGGTTGTCCCTGGTGTGATAGGTGCCCGTTCAGTTAAGTGGCTTGATTCCATCAATATCATTGCCGAAGAATGCAAG..............................................................................GGATTCTTTATGCAAAAAGACTACAAGATGTTTCCACCAACAGTGAATTGGGATAACATCAACTGGTCTACTAGGAGACCGCAGATGGACTTTCCTGTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCAATATGTTCCCTGGAGGATGTGAGTGTTGTAAAGCATGGAAAG...............................................................................................................................................................................................................................ATAAACATCAAGGGGTACGCATTATCAGGAGGTGGGCGTGGCATAGAAAGGGTAGACGTGTCTATAGATGGTGGTAAAACTTGGGAGGAAGCCACCAGATACCAGAGAACTGGTGTTCCATATATTGCTGATGATTCAAGCAGTGACAGATGGGCATGGGTCTTTTTTGAAGCTGAGGCAAATATTCCCCAGAGTGCGGAAATAGTTGCTAAAGCG.........................................................................................................................................................................................................GTGGATATATCTGCAAATGTCCAACCTGAAAGTATAGATTCTGTCTGGAATCTGAGAGGAATCCTGAACACCTCATGGCATCGGGTTCATGTCCGAGTTGGTCAAGCAAATCTTTAGGCTGTGTTTGGTGTGTTGAAGCGGATGACAGTAATCAGCATATCAGGCCATGGTTGTTTGTATCCTTCTTAGCTTAAAATGAAAATAGCATGGTGGTTTGCGTCTTCCTAGCTTAAAATGAAAATAAAATGTTCTCTTGATGTTGTCTCGAAATACTTACGGAAATAATAATAATTTGGAAGTGATTGCATCTTGACAATTAATTGTGTTAGTTTCTTCTCCAGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590510" ref_strand="+" ref_description="SGN-U590510 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|114186917|gb|ABI53846.1| (e_value=2e-32) sulfite; (*ATH) AT3G01910.3 (e_value=2e-21) |; (*SWP) sp|Q9S850|SUOX_ARATH (e_value=2e-20) Sulfite oxidase OS=Arabidopsis thaliana GN=SOX; ">
      <seq>tttgtacaaatcttcttcatctacctcgcactcacacctagcaggactactgtgaagccggcggcaaaggaaactgagaaaatgcctgggattaaagggccttccgattattcgcgagaaccccctcgccatccttctcttaaaattaatgccatggaaagataaacatcaaggggtacgcattatcaggaggtgggcgtggcatataaagggtagacgtgtctatagatggtggtaaaacttgggaggaagccaccagataccagagaactggtgttccatatattgctgatgattcaagcagtgacagatgggcatgggtcttttttgaagctgaggcagatattccccacagtgcggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="97603" stop="90825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97303" g_stop="97148" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97147" i_stop="91554" i_length="5594">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91553" g_stop="91549" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="161" r_length="5" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91548" i_stop="91326" i_length="223">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91325" g_stop="91125" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="362" r_length="201" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U590510" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97303" e_stop="97148"/>
          <exon e_start="91553" e_stop="91549"/>
          <exon e_start="91325" e_stop="91125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTACAAATCTTCTTCATCTACCTCGCACTCACACCTAGCAGGACTACTGTGAAGCCGGCGGCAAAGGAAACTGAGAAAATGCCTGGGATTAAAGGGCCTTCCGATTATTCGCGAGAACCCCCTCGCCATCCTTCTCTTAAAATTAATGCCAAGGTTACTCTATAAACTTCCCTGTTTCTTCATTCTTTTGCCACTGTATAGATCGCTGCAATTAAGTTTTCCAATTATCTGAATCCTCAATATTTCAGAGTTAAATGGTAGTTATTCCGATGTTTATGAATCAAAAGATATTCATTTTTGGTGGAGTTTCTATTGCGATTTTCTGCTAATTTGTTAAGACTATCTGCTGATCGAATCGTTACGGGAATTGCCGATTATCAAATTTTGTTGTAGGAACCCTTTAATGCTGAGCCAACTCGTTCAGCTCTGATTTCATCTTATGTCACTCCTGTTGATTTCTTTTACAAGAGAAACCACGGACCCATACCAGTAGTGGATGACATAGAGAGGTTTTATACTTTGGTTTGTTTTTGTAAAATCCTTTCATGTTTTTTTTTTCTTAGAGCTTTCTTGCTGATAGTGCTTGGCCCGTTCTTCAGGTATTCCGTTTCTCTGAGTGGTCTTATAAAAAATTCCAAAGACTTGTTTATGAAGGATATTTGGTGAGGATACTGCAGACCTTTACATCAATACTTCAATTTTCATGTAATTCTCTCAAATGATTGATGTTTTTTTGGTTTATAAATAACAGTAAGCTTCCAAAACATACGGTTACTGCCACTTTACAGGTAAATTATCATGCTCTGACTCCAGATTGTTGTGTTTGTTGCTGGGACAGAATTGTGGATTGGGATATGATAAATTTTGAAAAAGAAATTTTTGGGCCATATCTTATAAAATTCTCACGAGGGGAATGTGCACTGCTGTTGATCATTCAGCTATTTTGCAAAACTAATTTGGTTAATTCTTGTCTAGTGTGCTGGTAACAGAAGAACTGCTATGAGTAAGAGTCGAACAGTGAAAGGAGTTGGTTGGGATATTGCTGCTTTAGGAAATGGTAAGTTGATTAAACCTGCAGTGCATTCATCATTTAAATGCTTGGTCTGATATCTAATTCTCATATACTACTGTAGAGAACTTGAGAAATAAACTAGATTGGATGGAGAAGTCGCAAGTTCAACATGTTTATGCTAGAAAGTTTCCATTTCCGTTCATTATCTGCATGTGATCACGTATACACGCTCTTCTCTAAGTAGCCAAAGATAATTTGGAGATTATTAGAGTGCGCTAAATTCTGCTAATGCATTTCTGTTCAAGTCTAGAAGAGTTAGTACTACACTACCATACGCATAGAGTAGTCTTTTTTTTCTCTGTTTCGTTGCATCCTTGGATTGACAAGGAGACTACCAGTTTAAGTAGCCAAAGACAATTTTAAGATTATTAGAGTGCGCCAGATTTCTGCTAATGCAATTCTATTTAAGTCGAGAACAGTTAGTACTGACATTATAGAATTAAAGGGCCTTTGCTTGGTAAACTTACTACACTACCGTACACATGCTGTAGTTTTTTTCTCTGTTTTATTCCATCCTTGGATTGAAAAGGAAACCACCATCAAGCCCCTTTGTAGCTCCCCAACATTACTTTTGACTTGGTAAATGTGATTGCTTTAACTGATTTGTATGTGTCGTTCCCTTTTTCTTCTACTTCTGAGAGGTTTCACAATATATCTACATGTCTCGCTGCTGGTATGTTTATAATTTAATTGACTTACTAGTTTGTTTGTTTGTCACTCGCTTATTTGGTAAGTTCTCCTTTGAGTATGTAGAGTCTCAACTCTCATGTGAGTATGACTTTACTAATGTAATTGTAATGTTACTGACCCATGAAATCAATTTTTGAAAGAATTCATTTGAAAAAGAGTTCATTAGAAGAACTTTAATCATGTCCTACCTTTCTACTCATGTGTATTACAAATGAGGGGTTTGTTTTTTACTAGCATTTAATGAGATTCCTCTAAAAAAAAATTCATGGGCCTGTATAATACTCCCTCCGTCCTTATTTATGTGGCAACGTTTGACTTGACACAACAACTATTTAACATAGGAACCAAAGCTTGTTCCAAGGTAATCAAGTTCACTCTACTCCAGTAATGTGTGATGTTCCTGCTTGTGGTCTTCATATTTATTTTTTTCCGAAAATTTTTGACTGATTATTTCAATGTTCACCCATTACTTGTATAATAAATGAGTCAAATTAACATTTTATGCTTAATTTGACATAGGTAAAAGAAAAAAAATCTATACATACTCAAAATATAACACATGTATTGAGACAGATGGAGTAATAAGTTGTGGAACTTGTAATGATTGAGTGAAAAGAGTATATGAATTCATTATATTGTGAATTTGGTAAAGAATTAAATAAACCATTTGCATCTATCTGACAGAAAATATATATAGGATATAATGTTTCCTAGCCACGGATTCATCTGTTTCGCATTCTGCACCTGGTATGATTATTTGCTTTGGTAATGAAAAGAACAATGGTTTCGGTCATGTATCTAATTCTACGGTGGAAGAGAAGGTTCCATTGGAACAATATTTGTTCAGTCAAGGGCTCCTCTCTCTTTTTTTAAAAAAAATTAATAAAGAAAAGAAGTTAGGGTATGAGAAGAAATGACAAGAAGGCGTTGGAATATAAATTTGGAAGAGATGACGAAGGCAGGAGTTAATACTTGGTTATGGTAACTGCCAAATGATTGGTATGAATTTTAAGTTATACTGATGCATTGCTCCCTCCACCAAAATCACTTTTTCCAGTTGATCTCTGTTAGGAGTTTTTTTGAGAAAAATGTCAAGTATAAAATGCTTCTTGATGCCTCAATTTATTAAAAATAAATTAATTTACATTTAACTTGTTACATCATTGTGCATTTCAGCTGTTTGGGGTGGAGCCAAATTGGCAGATGTTCTAGAATTAGTTGGAATACCTTATTTGGCAAGTATCACACAATCTGGAGGAAAACATGTGGAATTTGTGAGCATTGACAAGTGTAAGGTGATTATGTACGATATCTTATTCCTAGATAAAAAAAATGTTGTTTCTTTTTTCTCTTTTCTTCTTTACTTTTCTTTATTAGATATGTATACCTTGCTGTAAACTTCCTGTCTCAGCAATATATATATGAATCTAGGAGGAAAATGGAGGTCCTTATAAGGCATCAATTCCATTGAGTCAGGCTACAAACCCTGAAGCTGATGTTCTGCTCGCTTATGAGATGAATGGAGAGGTAATACAAATCTCTCTCTTCTATCTTTAATATAAATGTGTTTGTTTTCTCAGTTTGACCTATTTCCCTTATTCAGCTTTCCTAATAATGTAGTTTCTTTTACAACAACTACTAATCTCTGTATAATTTTCCTATTGTACACTTAAAAAGACTAAGTTTCTTGTGGGTCTGTATTTTCCCTTGTTAAATATCAAATAGTGCAGTTTATAAGTTTCTATACAGTTTGTTCAAAGTCAAACCAAGGAATCCAATTTGAAACTGTTGGAGAATTTTTTGTTATTTTTGGGTCTTGATGTGACATAAAATACCGCATTTTGTCACTTTTAAATCCAATATAACAAACTATTCAAAATGTTTGTCCTTCAATTCTAACTTTTTGGAGTTGTCTGGTTCACTGAGGGATGAGAATTGTGTTAAATTTGACTGTTTGACTTGAGTTAATAGTCATGTTCAGTGTGTCAATCAATTGTAATCGCGTGTATTGAATGCTGTGCCTATTATAATATCAAATGGCATCGTTGGTCAATTCTGTGTTTCAGATTTGTTGAGTGGAATTTTGTTAGTTTTGCTTCAGCTGGTTCTGAATTTATTTCCTCTTAAAATTATTGTCATGTATTTGGTCAAGTAGTCCATTAGACAGCAATCAATGGGAACAAAGAGGGTGATATCTGATTGGCAGAGAACTATACTTCTAATTGCATGTTGAGCCATCTTAACAAAAAGTGTTCTTTTTTAGCATAACGACAACAACATTCCCAGTATAATCCCAGAAGCGATGTGAGGTCTGGGGGTATTTTAAGCATGCTATTCTAAAATTATCTTTTGTATTTTTGTTTCTACACTGGATATCTTGGTAATGAGAAGATTAGTATTTTGAGTGTCAGCTTGGAAACTTCTGCTACACCCTTAACCCTTGCAATTTCCTTTTAAAACCTGATAAATTGATAGCTCAACTCGCAATATGCTATACTAACGTTCCTGGATTCACGTGTGAAGCCACTTAATAGGGATCATGGCTATCCACTGCGTGTGGTTGTCCCTGGTGTGATAGGTGCCCGTTCAGTTAAGTGGCTTGATTCCATCAATATCATTGCCGAAGAATGCAAGGTTGCTATTTATGTATTAGTACTTCAGATGATTTAACATTTTCTTTTAAACTTTTTTAACACAATATCTGCTGGACAGGGATTCTTTATGCAAAAAGACTACAAGATGTTTCCACCAACAGTGAATTGGGATAACATCAACTGGTCTACTAGGAGACCGCAGATGGACTTTCCTGTTCAGGTAATTGGTTAAATTTCTCCCCATCAGTAGGTTTTCATTGGGGGGTTCTTTTAGTGTTTTTTTAATATAGAATTGTCTTTCCTGTAAATAGGTAGATAGGTAGACTAGGAATTCAAGATTACAGGTTTGGGTGGCGTTTGCTTCAAAAATTTGGAAGCTTGTACTCAGAAAATCTTTTCAGATTTTTTGCTAAACCTTCTTTCGATTTTTGTGAAGCAAGCACCACCTTGGTCATTTTATTAATGAAATTTGTGAGATACCTGTGGATTGTGTTACCCCAATTTTCCAAGTTATGTGGTGTCTTTGTACTTGTGTGGAACTTTATTAATATCCGTTAATTTGGATGATGAAGAATTCATTATGTTTCCACAAAATACTGAAGCAGCTGTCCATTATGCTTCATGCTTTTCATGATTTTGCAACTGGCTAAAGGACTACCTCCCCTGGTTATTCCCAGGTTCTGAACTTGGAGATGATTAGGACCCACTTGGCCCATAGCTTCACTTGCAAATACTGAAGCAGCATTTGCAAGTTGAAGTTTGGCCATGAAGTTTTGAGTTCTAGTTGATGTTGATATTCAAGTGAAGTTTCTCAAATCTTCAACTTCCACTTATAAATATCAACTTTGCAAACTTTATTTTCCAACTTCCAACTTCAAATACATTTTTTTTTCAGTTTCAACTCATATTGTCCGAAAGAATGCTTAGTTTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATACACGGTTGGAGTAAAACGGTTGATGCATGTGTCCTAATTTGTTTGATAGAATATTGTAACCGGGTTTACGATTTGCAATAACACTATGTCAAAACTTCTCTTATCCTGTGTAATAAGTATTGATGTCCCTGCTATATGATATTATTGGAATTCTTTACATGATGGTTCTAGAAAGTAGAAAGCCTAGTGATTACTTTTAGAAGTGTCTATTTCCAGATCTGAGATGGTCCAACCAGCTAACTGCCTGTTGATCAAATGATTGATTGATCTGGCATGACTTTAGCATTTATATCTGGCTGGTAACCAACATGGCTTCACAACTTTTTAAATTTGTCAATTGCTGACAGTTACTTTATTCCCTTTCTGGTTACAGAGCGCAATATGTTCCCTGGAGGATGTGAGTGTTGTAAAGCATGGAAAGGTCAGTTTTAATATGATGAACATTTTGTGTTCAAGCATTTCTTGACATTTATCTTAATTCTTAAATGGACAGTTTTACATATACTTGTGTAAAGGAGTTTGCACGGTCTGGAAAAAAAAAAGAGTTTGCATGATTCAATTTAGTAGCCTTATTTTGTACTGTTGTAAGTAGAGAATCATGGGTACTTCATTAGGTTATTCTAGCGTCTGGTATTTGTTTTCAGATAAACATCAAGGGGTACGCATTATCAGGAGGTGGGCGTGGCATAGAAAGGGTAGACGTGTCTATAGATGGTGGTAAAACTTGGGAGGAAGCCACCAGATACCAGAGAACTGGTGTTCCATATATTGCTGATGATTCAAGCAGTGACAGATGGGCATGGGTCTTTTTTGAAGCTGAGGCAAATATTCCCCAGAGTGCGGAA</genome_strand>
        <mrna_strand>TTTGTACAAATCTTCTTCATCTACCTCGCACTCACACCTAGCAGGACTACTGTGAAGCCGGCGGCAAAGGAAACTGAGAAAATGCCTGGGATTAAAGGGCCTTCCGATTATTCGCGAGAACCCCCTCGCCATCCTTCTCTTAAAATTAATGCCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAG...............................................................................................................................................................................................................................ATAAACATCAAGGGGTACGCATTATCAGGAGGTGGGCGTGGCATATAAAGGGTAGACGTGTCTATAGATGGTGGTAAAACTTGGGAGGAAGCCACCAGATACCAGAGAACTGGTGTTCCATATATTGCTGATGATTCAAGCAGTGACAGATGGGCATGGGTCTTTTTTGAAGCTGAGGCAGATATTCCCCACAGTGCGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577745" ref_strand="+" ref_description="SGN-U577745 Tomato 200607#2 [72 ESTs aligned] (*GB) gi|77999240|gb|ABB16967.1| (e_value=8e-156) unknown [Solanum tuberosum]; (*ATH) AT3G27090.1 (e_value=9e-114) | Symbol: None | expressed protein, similar to gda-1 (Pisum sativum) GI:2765418 | chr3:9990780-9993063 FORWARD | Aliases: MOJ10.16; (*SWP) sp|P37707|B2_DAUCA (e_value=5e-71) B2 protein OS=Daucus carota; ">
      <seq>gacagttctacattcatagatttggtaaatcccaaaatatagggtttctctactttttttttttcgtaagctttaatttcggcctatatttctgcatttttgcgtaatctccgggtcttcgcagccgaagtgataaagggatactgcaacatggagaatatgcagagctattggcaatttggcgacgagcttcgaggacaatcaaaagcctcagaggatcataaatggtcaacagctgctataaaattatctgaacagatgaagtacaaaggtgaacgtaggaataaccttgacctttcaaagagctctgctgaaattaggcccaggggtaatcatatgtttcaggaagataacaagtgggaaagccttaacttcaatatgttaaatttggaaagcaagatgactgaaaatatgagcaagaatcgcattatggatagcattttcaatgcaaatccagtttatcttaagcccaattttaacagcttgggaaattcatctttaagcaagttcaatgctagcaactataccaaggaacctagcaagaataacaataacaacgttgagagcacaaatggaaataactccgttgacaaaaggtttaagactctgcctgctgctgaaacactgccgaagaatgaggttcttggtggatatatatttgtttgtaacaatgacacaatgcaggaagacctaaagcgcctgctctttggccttcctcctagatacagagattccgtgagggcaataacaccagggttgcccttgttcctatataattacactactcaccagttgcatggtatctttgaggcatcgagttttggaggttccaacattgatccaactgcctgggaggataaaaagtgtaaaggagagtcaaggttccctgctcaggtgaggatccgtgtccggaaagtctgtaatcctttggaggaagatgctttcagaccagttttacatcattatgatggccccaagttccgtctggagctctccattcctgagactttggacttactagatctctgtgaaaaagccggtgtgtaggtgctatgtgctcgtgctggcgtcctgtaatagtaagcataaaagaactgtagcctatgtgaatgttatagatttgtggtgcatgtcagcagtgtgctgtccgtagattttccttagcgtaagctttggggtgcaagtctagttaagaggttgtaagtttaggattggcttgtattagccaaataagtgtaatgcttatctctgaagatatttgctgagtggcttcacaaatttagctatgtaatcttgcagtaaactagaaacaagtaagacagttatgtaatgggtcaagatcgaatgtgtttctgtatctgcagaggaactctgcttcatgtgatttgtaaggtttgaattcttaacatttctttacatttagggaatgccagtgcgtgtccaccaaggtatttggtgactttgtcataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="104750" stop="101051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104451" g_stop="104311" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="0.872"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104310" i_stop="103743" i_length="568">
            <donor d_prob="0.793" d_score="0.66"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103742" g_stop="103174" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="709" r_length="569" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103173" i_stop="102791" i_length="383">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102790" g_stop="102690" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="810" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102689" i_stop="102187" i_length="503">
            <donor d_prob="0.856" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102186" g_stop="102103" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="811" r_stop="894" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="102102" i_stop="102016" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="102015" g_stop="101905" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="895" r_stop="1005" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="101904" i_stop="101817" i_length="88">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.873" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="101816" g_stop="101351" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1006" r_stop="1471" r_length="466" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U577745" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>1472</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104451" e_stop="104311"/>
          <exon e_start="103742" e_stop="103174"/>
          <exon e_start="102790" e_stop="102690"/>
          <exon e_start="102186" e_stop="102103"/>
          <exon e_start="102015" e_stop="101905"/>
          <exon e_start="101816" e_stop="101351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAGTTCTACATTCATAGATTTGGTAAATCCCAAAATATAGGGTTTCTCTACTTTTTTTTTTTCGTAAGCTTTAATTTCGGCCTATATTTCTGCATTTTTGCGTAATCTCGGATTCTTCGGTTCAAGATTGTTTGATATTGTAAATCTCTTTTTAAGTTATTTTCCATGATTATATCCATTTTGTTTCTTTGATCTATTCTTTTCCTTTTAGTGAATTTAGCAAGATGAGTTATTCATTGACTTTTGAATGCACATATTATTAGCACGGTATACTTGTACGTTTTTTCAGGCTTTTGTTTATGTCAATGGCCAACAAACCATAATCTCTAGGTATACTTTTTCTATGCACTTAGCTGATTTATGATTCAGGTTGCAATTACCTTGATGTTGATTGTTGAGAGGAGTAACTGATCTATATCGAAAAGAGGGTTACTTAGATAATAAGCACCCCCAACCTCCAACCTAAATTTGTGGGTTCGAGTTAGCAAGAGAGCAAAAAAAGGTGGGAGCTCTAGTAAGGGGTAAAAAGAAATAAAAATCTGTATCAAGTACAACTAATGCTGCTAGTTGAGTTAGAAAGTTCTATGTTTTGTAGTTTTTTTTCTATCATATGTCCCTATAGATTGAATTGCTATGGTTGACTCACTTTTCATGATTGACAAGTTGTTGTGAACTTATTTATGATGCTTAAAAATAATTGCATTCAGATACTGCAACATGGAGAATATGCAGAGCTATTGGCAATTTGGCGACGAGCTTCGAGGACAATCAAAAGCCTCAGAGGATCATAAATGGTCAACAGCTGCTATAAAATTATCTGAACAGATGAAGTACAAAGGTGAACGTAGGAATAACCTTGACCTTTCAAAGAGCTCTGCTGAAATTAGGCCCAGGGGTAATCATATGTTTCAGGAAGATAACAAGTGGGAAAGCCTTAACTTCAATATGTTAAATTTGGAAAGCAAGATGACTGAAAATATGAGCAAGAATCGCATTATGGATAGCATTTTCAATGCAAATCCAGTTTATCTTAAGCCCAATTTTAACAGCTTGGGAAATTCATCTTTAAGCAAGTTCAATGCTAGCAACTATACCAAGGAACCTAGCAAGAATAACAATAACAACGTTGAGAGCACAAATGGAAATAACTCCGTTGACAAAAGGTTTAAGACTCTGCCTGCTGCTGAAACACTGCCGAAGAATGAGGTTCTTGGTGGATATATATTTGTTTGTAACAATGACACAATGCAGGAAGACCTAAAGCGCCTGCTCTTTGGTAATTACCTTTTCCCTATCATGTTAAGCATTGTCTATTCAAGTGTGATATTGCATTTGGTATTCGGTAGCCAGGGATTTTATGTTGTGTTACTGGTTGGATAAACTGCATGTTGAACCTACTTAGTTAACGACCAGTGGTTTTACGCTATTTTATTATAGAAGCTCAAAGAGCATCTAGCCAACAATTGAAGAAAATGGATTTTGACTTTGTTACTAGCTCTGAGTGCTCTTCTTCAGAATTGCTATCACCAATCCTCAACTCCTATCACAGCATAGCCTAGTATCGACAAAAGTTTAAATCATTGATAAATAGATGATGACTAGAGAATAGTTCTTCCCAATTGTTATCCCCTCTGCTCAACTCCAATCATTTACTTGCAGGCCTTCCTCCTAGATACAGAGATTCCGTGAGGGCAATAACACCAGGGTTGCCCTTGTTCCTATATAATTACACTACTCACCAGTTGCATGGTATCTTTGAGGTTAGTTGCAGAAACTTTTTGCTATATTGTGATTGTGTGAGTTCATATGATGATAAATCAACTGTTTTATATTTCTAAAGCTTAAGTGTAAATCAACACCAAGTATCATGTTGGATGTCGCATTCGCTTTCACATCGTTGTATATGATTGCGTGCAGTGTAAAGCATAAGTTTTATATTCGTACAAAAGATTGGCTGCTTCTTCTCCTTTCAGATTTTCTTAATTCTGTGGTTAGAAATTTTTTTGCCTTGTGTTAAGCCTGGTGCCTTGGTGTGCTTGTGTAACTTTATGGGGAACCTTATAATTTTGCGGTTTTTGGCCTGAACATTAACATGTTTTTAAATATGGCACCATAAGCTTCTTTTTTAAATAGCTTCAGTTTCATTACTTCTCTGGCTCTATCTTAATTTATGCAATGAGCATAGATATTAAAGATAAATTGGATTCAATCAAATCAAGTATCCGGCATGGGCCATGACTTTTTCTTTGAACTATCTGGGCAGGCATCGAGTTTTGGAGGTTCCAACATTGATCCAACTGCCTGGGAGGATAAAAAGTGTAAAGGAGAGTCAAGGTTCCCTGCTCAGGTAAGTTTATGAATTACAGCTCATTTTCTATTGAGGCTTTTGAAGGATCTGTGTAGATTTTCTTAGTTTCACGTACTTAATGCTTAGGTGAGGATCCGTGTCCGGAAAGTCTGTAATCCTTTGGAGGAAGATGCTTTCAGACCAGTTTTACATCATTATGATGGCCCCAAGTTCCGTCTGGAGCTCTCCATTCCTGAGGTAAGATGATCATTCACATGTAAGTTCCATGCACCTGTTATGGGTAGACTACAGGTTTTTAACTCCTAAAACCTTATCGGATTTGCAGACTTTGGACTTACTAGATCTCTGTGAAAAAGCCGGTGTGTAGGTGCTATGTGCTCGTGCTGGCGTCCTGTAATAGTAAGCATAAAAGAACTGTAGCCTATGTGAATGTTATAGATTTGTGGTGCATGTCAGCAGTGTGCTGTCCGTAGATTTTCCTTAGCGTAAGCTTTGGGGTGCAAGTCTAGTTAAGAGGTTGTAAGTTTAGGATTGGCTTGTATTAGCCAAATAAGTGTAATGCTTATCTCTGAAGATATTTGCTGAGTGGCTTCACAAATTTAGCTATGTAATCTTGCAGTAAACTAGAAACAAGTAAGACAGTTATGTAATGGGTCAAGATCGAATGTGTTTCTGTATCTGCAGAGGAACTCTGCTTCATGTGATTTGTAAGGTTTGAATTCTTAACATTTCTTTACATTTAGGGAATGCCAGTGCGTGTCCACCAAGGTATTTGGTGACTTTGTCATAAA</genome_strand>
        <mrna_strand>GACAGTTCTACATTCATAGATTTGGTAAATCCCAAAATATAGGGTTTCTCTACTTTTTTTTTTTCGTAAGCTTTAATTTCGGCCTATATTTCTGCATTTTTGCGTAATCTCCGGGTCTTCGCAGCCGAAGTGATAAAGG-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGCAACATGGAGAATATGCAGAGCTATTGGCAATTTGGCGACGAGCTTCGAGGACAATCAAAAGCCTCAGAGGATCATAAATGGTCAACAGCTGCTATAAAATTATCTGAACAGATGAAGTACAAAGGTGAACGTAGGAATAACCTTGACCTTTCAAAGAGCTCTGCTGAAATTAGGCCCAGGGGTAATCATATGTTTCAGGAAGATAACAAGTGGGAAAGCCTTAACTTCAATATGTTAAATTTGGAAAGCAAGATGACTGAAAATATGAGCAAGAATCGCATTATGGATAGCATTTTCAATGCAAATCCAGTTTATCTTAAGCCCAATTTTAACAGCTTGGGAAATTCATCTTTAAGCAAGTTCAATGCTAGCAACTATACCAAGGAACCTAGCAAGAATAACAATAACAACGTTGAGAGCACAAATGGAAATAACTCCGTTGACAAAAGGTTTAAGACTCTGCCTGCTGCTGAAACACTGCCGAAGAATGAGGTTCTTGGTGGATATATATTTGTTTGTAACAATGACACAATGCAGGAAGACCTAAAGCGCCTGCTCTTTG...............................................................................................................................................................................................................................................................................................................................................................................................GCCTTCCTCCTAGATACAGAGATTCCGTGAGGGCAATAACACCAGGGTTGCCCTTGTTCCTATATAATTACACTACTCACCAGTTGCATGGTATCTTTGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCGAGTTTTGGAGGTTCCAACATTGATCCAACTGCCTGGGAGGATAAAAAGTGTAAAGGAGAGTCAAGGTTCCCTGCTCAG.......................................................................................GTGAGGATCCGTGTCCGGAAAGTCTGTAATCCTTTGGAGGAAGATGCTTTCAGACCAGTTTTACATCATTATGATGGCCCCAAGTTCCGTCTGGAGCTCTCCATTCCTGAG........................................................................................ACTTTGGACTTACTAGATCTCTGTGAAAAAGCCGGTGTGTAGGTGCTATGTGCTCGTGCTGGCGTCCTGTAATAGTAAGCATAAAAGAACTGTAGCCTATGTGAATGTTATAGATTTGTGGTGCATGTCAGCAGTGTGCTGTCCGTAGATTTTCCTTAGCGTAAGCTTTGGGGTGCAAGTCTAGTTAAGAGGTTGTAAGTTTAGGATTGGCTTGTATTAGCCAAATAAGTGTAATGCTTATCTCTGAAGATATTTGCTGAGTGGCTTCACAAATTTAGCTATGTAATCTTGCAGTAAACTAGAAACAAGTAAGACAGTTATGTAATGGGTCAAGATCGAATGTGTTTCTGTATCTGCAGAGGAACTCTGCTTCATGTGATTTGTAAGGTTTGAATTCTTAACATTTCTTTACATTTAGGGAATGCCAGTGCGTGTCCACCAAGGTATTTGGTGACTTTGTCATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573749" ref_strand="+" ref_description="SGN-U573749 Tomato 200607#2 [31 ESTs aligned] (*GB) gi|13631844|sp|P92792|TOM20_SOLTU (e_value=5e-77) Mitochondrial; (*ATH) AT3G27080.1 (e_value=7e-57)  Symbol: None | mitochondrial import receptor subunit TOM20-3 / translocase of outer membrane 20 kDa subunit 3 (TOM20-3), identical to mitochondrial import receptor subunit TOM20-3 SP:P82874 from (Arabidopsis thaliana) | chr3:9986319-9987866 REVERSE ... ; (*SWP) sp|P92792|TOM20_SOLTU (e_value=3e-78) Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum GN=TOM20; ">
      <seq>gactaggtctcatccgcttcaagttgaaatttagaaccctagttatcgcagtaagtgcaaaggaacgtccgtttcgataccgttcatcatggatatgcaaagtgatttcgaccgactcctctttttcgagcacgctcgcaagactgccgaaactacatatgctacagatcctcttgatgccgagaatttgacaagatgggcaggtgcattactggaattatcacaattccagtcggtcagcgaatcaaagaaaatgatatctgatgctatctcaaagttagaagaggctttggaggttaatccacagaagcatgacgccatttggtgtttggggaatgcatatacatcccatggctttctaaatcccgacgaagatgaagcaaagatttttttcgacaaagcagcccagtgcttccagcaggctgttgatgcggatccagaaaacgagctttatcagaaatcatttgaagtttcttctaagacttcagagttgcatgcccagattcacaaacaaggtccccttcaacaagccatgggaccaggaccatctacaacaacatcaagtacaaagggtgcgaagaagaagagcagtgatctgaagtatgacgtttttggatgggtaatacttgctgttggacttgttgcatggattggctttgcgaaatctaatatgccgccacctgcacatcctcttccaagataagggccaaaatacaatcttctaggccaaaatacatgatgtaattttttcctgcataaaaatggcttttggcgattcaagcttttgccatatagataggatttactgatgtaacatagtttgaattaagacactcttttgtcctttgattgatactagtcataaaacgattttatgaagctgttttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="107226" stop="115006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107526" g_stop="107709" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107710" i_stop="107848" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107849" g_stop="107927" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="263" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107928" i_stop="112298" i_length="4371">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.794" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="112299" g_stop="112468" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="433" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="112469" i_stop="112552" i_length="84">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="112553" g_stop="112600" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="481" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="112601" i_stop="113638" i_length="1038">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="113639" g_stop="113728" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="571" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="113729" i_stop="114388" i_length="660">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.846" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="114389" g_stop="114706" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="889" r_length="318" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U573749" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>889</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107526" e_stop="107709"/>
          <exon e_start="107849" e_stop="107927"/>
          <exon e_start="112299" e_stop="112468"/>
          <exon e_start="112553" e_stop="112600"/>
          <exon e_start="113639" e_stop="113728"/>
          <exon e_start="114389" e_stop="114706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGAGGTCTCATCCGCTTCAAGTTGAAATTTAGAACCCTAGTTATCGCAGTAAGTGCAAAGGAACGTCCGTTTCGATACCGTTCATCATGGATATGCAAAGTGATTTCGACCGACTCCTCTTTTTCGAGCACGCTCGCAAGACTGCCGAAACTACATATGCTACAGATCCTCTTGATGCCGAGGCACATATATTTTTTTTCATTTTCTTCTATTACTCATAGACAACATATGCATTCTCATGCTCTAACTTGTTATTTAATTGATTGTTGTGTGCGTATTGACTAATTAATCGTGACATTTGTTTCTCACTGATTCGTGCAGAATTTGACAAGATGGGCAGGTGCATTACTGGAATTATCACAATTCCAGTCGGTCAGCGAATCAAAGAAAATGATATCTGGTATTTCTTTCTCTTTCTAGTATCTATCAGAGTTATTGGATTGTTAATTTAATTAATTCTTGTCAAGGAATCAGGGCAATGAATGTGAAGTGGTCTCAGTAGTTTTTAGAACCACTAGTATAGCTATTGACCAACTCTATCCTCCAAGTTAGGCGTAGTTAGATTTGAAGGGATCACTTAACTTTTTTTTGCCTTGGTCTCCTATGATATTCATTCTAACTGCATCTACAGTCAACTGACAGGTGACACCACAAGTGTAACATTTTGAATGACCTATTTATTTCAACACTCTCCCAACAATTTACCAAATTTGGGTTCTCGTATAAATTTCCATATGGATTTGCGAGTGTGAGAAATGACCTGGCACTGAGCTTATATGTAAGAATTTAACGGAAAACCTAAGAAAAGGAGCAGAGGGATGAGACATATTAAACACTTTCGATGCCCTTATATGTAACTAACCAAAGGCATGTTTCATAGCATAGTAGGGATGTTGTCTTTCATGGTTAGTAATCAAACAATTTTGTTATATCACTGAAAGACCATATATTATTTTTGTCACGACCGGAATCTAGACCCCAGACGAGACCGGCGTCGTTGACCTCTCAGAGGTCGCAGACAAGCCTACTTACGTCATTCTTACTTTACATAGATTAATTTTAGCGGAAAATTTGGAATTTTTGATTCTTTAATCATACTTGCTGAACATTCTTAACATTTCGTAATCGTTCATCATCAACCATCTAACCTTTAAGAGATAAGCAACTGAAAGAAATAATTCATTAAATATTAATTGTATATCGGCCAAAATAGCACCAATACAAAGTCTGAACCAAAACAGGAAAGAAACGCTAGTGGAACATGCCCCACTAGCTCAACTCTAAAACTACGCTAGAATGTAAAACAGTAGCATCCTCGAAGGCATAAGGACCTACCAAACTCCGGATGAATGCTGACGTCCAGATAGCTGCAACAAAGAACTTGTAGCTCTACCGTACACCTGTGCCTGCACCTAAAAGTAGATGTTTGTATGGAATTAGTACACACTTGTACTAAGTATGGGTATATGCAAGCACACACCAGGGACATGCATGAGAAAGAATAGCTCTTTCCTAACAACATGATTTTTGGAAGTCAAGTCGGTGGACTTGCTAAAATGAGATTAGGAAGGTTATGCCACGAGAGTGACATGCATCATTATAGTTATTGTATGGCACACAACACATAATATCTTCATATAACACATAACATATAGCACATAGTTTCTTTCATATTGTTCATTCATATACCATGAGACCTTACTATCATAGACTTAACCTTAAGACTTCCCAAAATGAGGGCTCAACATATGGGACCTCAACTAGGGAGCCTTCTTCAGCAAACACAGAGCCTGCTTCATTCATTCGTTCGTATTTCATTTCAATTCATTCATAGGCCAGTGCGAACACCAGCTATACCTAGGATGTAGTTTAAGACTTCCATTGGGTTTGCTGTGCAATGATCAGGAATGACCTAATGTCATTACCTAAATCTAGCTCACCTCTTGATTATCCTATCCTAACACCTTCGGTATCATTCATTTCTTTATATGATTCATTTGAGGCTGGCCTCATTCATTCATTGGGAACTTTAACTTTAACCGACATAGATCATGTGAGCATCATGAAATCCAGTGTCTTCCCCACACCGAAAAGAGGTGGAATCACCGGCCAAAGCGATTCAATAACATGCTAGCGTATATGGGAATTTAACCCCGCCAGATCCCTATAGTGGCAATATAGGTTCAAAGACTAGGAGATGTATGGAGACCCATACCCGGCAAGCCGGACAGTCTCATCTCATGAGAGTTACGTGAACCTCCGCCCTTCCCGAAAGAAGGCATCACCGCTCATAGCTAGCCTATCGGTGCTCAGTATAAAGTTCCATTACATCCAACTCATACATCATGGAAGTTGTCTTCTAGTATGAGGGCATCATAGCTCAATAGATGATTTCTCATCTCATTATTAGTATTAAGTGTTTTAAACTCAATATTTTTCATTAAAGTATTTATAGAGACTGGTCTCTTCATTATCTTACACCCTCATTGATGAATACGTATTGGTAACATTTACTTAGGCTCGTTTGAGATTGCTCTCTCCATATACATTAGCCTCACATCATGATTGTCACCACATTCTTCATTTCATTACGTACATCTTAGGTTCACTTATTTTTTTGAACGTATGTTAAACTTGTGTGTCTATACATACAAGCCATGGGGCTTCGTTTATAGTTCGTTAAGTGATTCTTATTTTCCTAAGATTATGTATTACAAGACTTATGTATCTTGTATATATACCAAGATCTTGATTTTTGATCAAAGTAGATTACATTATTCTTGAATATTTTACTCACGTATGACTTATGTATCAATACGGAGGTTTGGGCACGAGAACCCAAATTTTGAATTATTTGGATATCATTTATATTTTTCATTGATTTTTGTTCTAATATTCATAAATTTAGAACTCTAAGTTAAGTCTCAACATTTTCGTGAAATAATAAATTGTTTTATTTTAATTAGAATTCTAAATTAAATTTCAATCATTTAGATGAAAGAATAATTTTCTAATTTAATTAGAATTCCAATTTAAATCTCAATATTTACATAAAAGAATTAATATTCTATTTTTAATTAAAATTCTAAATTAAATCTCAATATTTACATAAGAGAATTAATTTTTTTAACTTTAATTAGAATTTTAATTTATTATTATTATTATTTTTAATTACATTCGCTTGAATAGGGAGGTTGTGGGTTCGAACCCCCACAGCCCCCTTTATTTTTCTCTTATTTTCGCTGGAAATGGAGGCTGTGAGGTGGTGGGTTCGAACCCCCACAGCCTCACCTTTATTTCCTTAATATTTGTACCCCTCCCTTCAACTCTGAGGTCGTGGGTTCGATCCCCACGCCTCACATCCCTTTTTATTCCTTTTTTTTTTTTCGCGAACTGGGGGTCGTGGGTTCGATCCCCGCCCCCAGCATTCCCTTTTAAATCTTTTTTTTTTTTTTTTTTTTGCGCGTGGCTGGGGTCGCGAGTTCGATCCCTGCCAGCCCCATTTTTTTTTTTTAATTAAGGCATGCTGCAGGGAGGTCCTGGGTTCGATCCCTGCAGGCCTCAAAACTTTTTTTTTTAATTCTTTTGATGTTCAAAAAATTTCCAGATTCTTTTAAAGTCTGTTTTCAAGTTCTGGAAATTTATTCTACGATTTTTCTTCACTTTTTCATCAAGTTTAACATTAATTCTTAGGGAAATTTCATGGTTCATTCATAATGTTTTAATTACACATTATATTTTTTTTTTTATAGATTCGTCTAACCAAGAATTACTCCCTCAATCAAGCCACCTAACATTTCATATGAACTTCACGTCTTACCCCATTTTATTCACGAAAAATATACAATCATATTACATTAAACTTTTGGAGCATTACATAAAGAACCTCATTCACTGTAACATACTTACACATAATTTCAAGAAAAACATGGTTGCCTTTCATACGATTCCAAGTACACAAACATAATCATATTCATCGCGAAAACATAATATACACCTAAATCTACCAGCAATCATACCCAACCTAAAATTCATTGGGAGCTAGTGACAGGGGCATGCAACGGGAAACAGCCTTAGTTTCGAGATGAATAACTTGAATCGTAAGGGGCCTCTTGGGAAAGGAGCCAAGAGAGAAGAAACCCATACCTTAATCGATGTTCAAACTTTAATGTTGCTGCCCGGAAAACTCCTCCAAACCACTCCCAATTCACTTCAACGCACACCTCTCTCGACGAACCTCTCTTAGCCTTGACGTTTTGATTACTTATTTTCTTTTACTTGAAAATTTTTTGTGAGTTTTTCAAGCATGAAAACTGTTGATATTTTTGGCAGAAATAATGTGATGAAGATGGAGAACGTGAGAAAGAGAGTTAAGGAGCGTGAGAGAGAGAGGACTATTTGGATTAGGAGACTAATTCAAAAATCAGTCAAATAATAAATAAATACAAATCTGTTTTTGATTTATTTATTTATTTATTCATTTAAAACGTGAAAGGACAATTACGCCCTTTAAATACTTATTTATTCTTATTTATATAAAAAATTTTTTTTGAATCGTTACAATTTTTGAACTGGCATGTATTACAGATGTTAAAGTTCCGCACTAATAGCTTTAAGACCATACTATTAAGGCATACTCATTTTGTAGAAGGAAATGTTTGAAGGGTGGGTTGAAATCCTGGGCCTTTTTTTTGTAATAAGTTGATGGAACTGAAGATAGTGATAGTATTATCTGTTCTTGTCTTCTAATTGGGAAATATACACTCTCTAGATGCTATCTCAAAGTTAGAAGAGGCTTTGGAGGTTAATCCACAGAAGCATGACGCCATTTGGTGTTTGGGGAATGCATATACATCCCATGGCTTTCTAAATCCCGACGAAGATGAAGCAAAGATTTTTTTCGACAAAGCAGCCCAGTGCTTCCAGCAGGCTGTTGATGCGGTATATTTTTTCTCTATGCTCATTTTGATATTTTTAACGCAGTTTTGGGGCTTACTTTCAACGCTTTGTTTTTGTTAACTGTAGGATCCAGAAAACGAGCTTTATCAGAAATCATTTGAAGTTTCTTCTAAGGTAAAGTTAGTGTTGTTTTTTAGTTGGCCTTTAGTATGTTTAGTGTGTTGAATTCTTGTCACATGTTTAAGTCTTCCCTGGAAGAAGTGCCTTCACAAGTGATTTCCATGTATACTTTGAGGAGCTTTCCTCTTTTTTGTTGATTGTTTGGCACAGTATGCCTTCAATTTTCCTATTATTTTCCTTCACAATAAATAATTTCATCTATCAAAGGAAGTTCTATGTATATATGATTCACCACATGATTGCTCAAAATGTAGTGTTTTGAGGCTTTTCTCTTCCAATCAGCTAACAACACATAATTCATTCTGCTCAGAGTAACATGTTGTATTCTTAATGAAGCATATCCTAATTTTAGATGTTAGCTAGGCCGTAGGCTCACATAATATTAGCAGAAAACATCAAACTAATCGATGCACGTTGAAGAGAAATCTATGAAGTTGGTCTTTCAATGTTATCTTTTTTAAAAAGTCCTTGGCCTAGTTTGGATTTGCCATTTCATCCTATGCAGTGCACATTACTTGACCAATTCATTGAACTCTGGTACGTCGTGCAGTTACATCATACTGATTAGGCATGCTAAATTGTCTGCCCTAAGTATCTTATAAAGAGAAATATCCACCTTAAGTATGATTTAGCTACTACGCATTGTCTTCACATTCAGTAGATACTTTTTTAACCAATGAATTATGATTTGTATACTTTTTTAACCAATGAGTTTGAGTATCAGAACGTTTGTTCTTTTCTTCTCTATTTTTACATTCTGTAAGATTCTTCAGATAGTTCATATGTTCATATTTCTTAGGTGGCGAAGGATTGAAAGAAGTTTGATCTGAGATTTCATTGCATCCTTTTGTGGAATAATGACGTGTTGGATGTTTATTGATATAATTTATATGTTTGTAAATGTCCTTCTAGGTGATTCATACTGCTCTTGGGATTTTGTTTATCATTTATGAGAACCAATTGTCCTTATTAATTATTTTATTATGTATGTATGTCATTTCTGTTTGTTACTTATGTTGTACATTATTTTAGACTTCAGAGTTGCATGCCCAGATTCACAAACAAGGTCCCCTTCAACAAGCCATGGGACCAGGACCATCTACAACAACATCAAGTACAAAGGTATTATACATTTTAATTCCCCCCACCCTGATATATATTTCTATTGATTCATGCTACTTAGTTTGTTTTTTGTAAATCTTACTCTTTTCATTTTCTCTGCGGTGCGGTTGTTTTACAAAGTGCATACTGAGTGCACTACACAATTCCATCTGTGGCCTACAAAATTAAAAACTTTATGCACCCAAGGATGTTAATTTAATGGTCAATGAAGTGGGTTGAGAACCATGAGGTCTCGGGGACAAACGCTTGAGTGAATTTCTTCACATCTGTCCAACCTTGGTGGACAAGCATGGATGGATAGAGTCACCCCTGTTGTTGATGGGAGGTGACATGTATCCCATGAAATTAGTCAGGTGCCTGCAACCTGGCAAGGACACCACTTTTTTTTTAAAAAAAAAATTAAATACGTTGTGTGGAAATTGCCTTCAACATAGTTTGGTGGTAATGTTTCTTTTTTTTTTTTGATTGTTCACATTTTTTTCCATTCTTGTTCTGTTCCTTTGAAGTAACAAAATTCCAAAAGGAAGTTTTTTCCATTCTTGTTCTGTTCCTTTGAAGTAATGAAATTCCAAAATCAAGTGGGCTGGTTTCATTGAACCAAGTTTCACAGAGTCGGAGGACTTGCTTAACCTTTCATTCTTTGTTTGCTCATGCATTCAGGGTGCGAAGAAGAAGAGCAGTGATCTGAAGTATGACGTTTTTGGATGGGTAATACTTGCTGTTGGACTTGTTGCATGGATTGGCTTTGCGAAATCTAATATGCCGCCACCTGCACATCCTCTTCCAAGATAAGGGCCAAAATACAATCTTCTAGGCCAAAATACATGATGTAATTTTTTCCTGCATAAAAATGGCTTTTGGCGATTCAAGCTTTTGCCATATAGATAGGATTTACTGATGTAACATAGTTTGAATTAAGACACTCTTTTGTCCTTTGATTGATACTAGTCATAAAACGATTTTATGAAGCTGTTTTAG</genome_strand>
        <mrna_strand>GACTAGGTCTCATCCGCTTCAAGTTGAAATTTAGAACCCTAGTTATCGCAGTAAGTGCAAAGGAACGTCCGTTTCGATACCGTTCATCATGGATATGCAAAGTGATTTCGACCGACTCCTCTTTTTCGAGCACGCTCGCAAGACTGCCGAAACTACATATGCTACAGATCCTCTTGATGCCGAG...........................................................................................................................................AATTTGACAAGATGGGCAGGTGCATTACTGGAATTATCACAATTCCAGTCGGTCAGCGAATCAAAGAAAATGATATCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTATCTCAAAGTTAGAAGAGGCTTTGGAGGTTAATCCACAGAAGCATGACGCCATTTGGTGTTTGGGGAATGCATATACATCCCATGGCTTTCTAAATCCCGACGAAGATGAAGCAAAGATTTTTTTCGACAAAGCAGCCCAGTGCTTCCAGCAGGCTGTTGATGCG....................................................................................GATCCAGAAAACGAGCTTTATCAGAAATCATTTGAAGTTTCTTCTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCAGAGTTGCATGCCCAGATTCACAAACAAGGTCCCCTTCAACAAGCCATGGGACCAGGACCATCTACAACAACATCAAGTACAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGAAGAAGAAGAGCAGTGATCTGAAGTATGACGTTTTTGGATGGGTAATACTTGCTGTTGGACTTGTTGCATGGATTGGCTTTGCGAAATCTAATATGCCGCCACCTGCACATCCTCTTCCAAGATAAGGGCCAAAATACAATCTTCTAGGCCAAAATACATGATGTAATTTTTTCCTGCATAAAAATGGCTTTTGGCGATTCAAGCTTTTGCCATATAGATAGGATTTACTGATGTAACATAGTTTGAATTAAGACACTCTTTTGTCCTTTGATTGATACTAGTCATAAAACGATTTTATGAAGCTGTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600611" ref_strand="+" ref_description="SGN-U600611 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tggggtaagacgtgaagttcatatgaaatgttaggtggcttgattgagggagtaattcttggttanacgaatctataaaaacaaatataatgtgtaattaaaacattatgaatgaaccatgaaatttccctaagaattaatgttaaacttgatgaaaaagtgaanaaaaatcgtanaataaatttccagaacttgaaaacagactttaaaagaatctggaaatttttgaacatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="111651" stop="110815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111351" g_stop="111115" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U600611" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>237</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111351" e_stop="111115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTAGACGAATCTATAAAAAAAAAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAAGAAAAATCGTAGAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTTGAACATC</genome_strand>
        <mrna_strand>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTANACGAATCTAT--AAAAACAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAANAAAAATCGTANAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAA-TTTTTGAACATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597674" ref_strand="+" ref_description="SGN-U597674 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctattctaaaatgaccacattagtttgttttacatattttaagctcaaataaaaagtactcccaataaaaccatttgtggaatccaaatttcgtttttagggaaacggcgtcgtgaaatgaatttcttaagttgcccagcaaactaaccaacccactttctccagtcttctgtcaagatgattgtaggtgtggaagagatgtcattggaagctaaagcattgggacactctggaattgccggagcagtgcctctctcattccgtcgctctttttgtttattccccact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="114853" stop="115740"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115153" g_stop="115440" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U597674" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115153" e_stop="115440"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTCTAAAATGACCACATTAGTTTGTTTTACATATTTTAAGCTCAAATAAAAAGTACTCCCAATAAAACCATTTGTGGAATCCAAATTTCGTTTTTAGGGAAACGGCGTCGTGAAATGAATTTCTTAAGTTGCCCAGCAAACTAACCAACCCACTTTCTCCAGTCTTCTGTCAAGATGATTGTAGGTGTGGAAGAGATGTCATTGGAAGCTAAAGCATTGGGACACTCTGGAATTGCCGGAGCAGTGCCTCTCTCATTCCGTCGCTCTTTTTCTTCATTCCCCACT</genome_strand>
        <mrna_strand>CTATTCTAAAATGACCACATTAGTTTGTTTTACATATTTTAAGCTCAAATAAAAAGTACTCCCAATAAAACCATTTGTGGAATCCAAATTTCGTTTTTAGGGAAACGGCGTCGTGAAATGAATTTCTTAAGTTGCCCAGCAAACTAACCAACCCACTTTCTCCAGTCTTCTGTCAAGATGATTGTAGGTGTGGAAGAGATGTCATTGGAAGCTAAAGCATTGGGACACTCTGGAATTGCCGGAGCAGTGCCTCTCTCATTCCGTCGCTCTTTTTGTTTATTCCCCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567068" ref_strand="+" ref_description="SGN-U567068 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|118489827|gb|ABK96713.1| (e_value=1e-101) unknown; (*ATH) AT3G01920.1 (e_value=4e-94)  Symbol: None | yrdC family protein, contains Pfam PF01300: yrdC domain; similar to Protein yciO. (Swiss-Prot:P45847) (Shigella flexneri); similar to Chain A, Crystal Structure Of E. Coli Ycio Length (GI:27573707) (Escherichia coli) | chr3:317439-319... ; (*SWP) sp|P0AFR4|YCIO_ECOLI (e_value=6e-27) Uncharacterized protein yciO OS=Escherichia coli (strain K12) GN=yciO; ">
      <seq>attggattcttggaagttggatccagttgttgaacttcttaaaggaggagctgttggagtcattcccactgacactctgtatgcaatagtttgtgatctgagcagtcattcagccattgaacgtcttcgtagaataaaagagatagaaccttcaaagcccctaagtatcatttgtcgatctttccgcgacatagatacatatacaactggatttccccgtggtaatgcccaaggtcttacagacatttttcgagcagtcaagcactgtctacctggtccttacactttcatcttaactgctagcaaacagctaccaaaacaatgcacgagatacgggtctgcaacttccaaatatgcttcaaggaaaaatgttggtgttcgtatacctgatgatcctgtctgtcaagcaattctagaaaagttggatagacctctaatatccacaagcgtcaagtcaccaaaggaggatgagtggatactggatcccgtcattattgctgatgtatatggtccagagggacttgattttgttgttgatgcgggtgttcgagtggctgatccgtctactgtagttgatatgactgaaagtgctcctagaattatacggcagggaaagggtcctaagcagccttggatgatagcggaagatgatgattctcctgtagatgaatagaatccgttgttgccgctgtttaagtaagaagtactgcttaaaatgtacacttcctcaagccagagctcttgtacagcgcacagataagatggtgaatccctcgcttgatcttgaacagtcttttagtcttcattagtgtagattgctgtaaatacttaacgtggtaaatcaagaatcacatgtaatattttgcttgtgtaaactttaaagcatgttatgatcactctctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="115408" stop="119781"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115707" g_stop="115784" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="115785" i_stop="116539" i_length="755">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116540" g_stop="116593" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="132" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116594" i_stop="116700" i_length="107">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.776" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116701" g_stop="116725" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="157" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116726" i_stop="116902" i_length="177">
            <donor d_prob="0.927" d_score="0.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116903" g_stop="117025" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="280" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="117026" i_stop="117422" i_length="397">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="117423" g_stop="117589" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="447" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="117590" i_stop="117694" i_length="105">
            <donor d_prob="0.518" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="117695" g_stop="117764" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="517" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="117765" i_stop="118098" i_length="334">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="118099" g_stop="118197" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="616" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="118198" i_stop="119192" i_length="995">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="119193" g_stop="119481" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="905" r_length="289" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U567068" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>905</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115707" e_stop="115784"/>
          <exon e_start="116540" e_stop="116593"/>
          <exon e_start="116701" e_stop="116725"/>
          <exon e_start="116903" e_stop="117025"/>
          <exon e_start="117423" e_stop="117589"/>
          <exon e_start="117695" e_stop="117764"/>
          <exon e_start="118099" e_stop="118197"/>
          <exon e_start="119193" e_stop="119481"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGGATTCTTGGAAGTTGGATCCAGTTGTTGAACTTCTTAAAGGAGGAGCTGTTGGAGTCATTCCCACTGACACTCTGTATGTTTTATTTCTCTTCTTTTTTTATCAATTAGTTTGTGTTTATACCTGAACGGCTTCTCTTGATGGTTAATTATACTTATTACTCTATCCATATTAACAATTTTGGTTCAACTTCTGATTGAGTCATGTAAAAATGAAAATGCTAATATAACCTTCCATGTATCTCCAAGTTTATTTTCTGTTCTACTATTCAATCATTTCGGTATTACTTGATACTAGGACTTGCATATCAATATCTTGTGTTAGGACTTACTCCCTTTTTTCCTTCATACCTCCATTAGTCAAACTAGGTAATCATATTTTACCTTTTCATTCCTTTCCTCAACAATAAAGCCTGAATTTTAGGCTTTTAAATATTATAGACTTTAAGCATCAAACCTACTTCACTTAATGGATTTAAGCTTCGCTGGAAGTGTTGCAACATGGTCATCCGATAATGCAATGTTGTTTTGAGATTAGATAGAGTGAGGTTGACTTTAGTCCGCTAGGGAATATGAGTGATCATCATTTTTTCAATCAGATGGATAGTAAAATGGACATACTGCTGGAAGCCATTCCCAAACAGTGACATTTGGATGATAATCATCACGTTCCAATCACTGCAAGTATAAAGCATCTTAATTCTTTGCAATATGAAGTTGTGTTATATAAAAATGAATTGGAGGAGTATCAATTTGGTTAAGAAGTGTACTTTAAGCCTCGATCAGAATCTTTTATAGCCTGAATTCTGATATTTGACATCTTTCAAACAGGTATGCAATAGTTTGTGATCTGAGCAGTCATTCAGCCATTGAACGTCTTCGTAGGTTAGTTCTACTAAACCTCTCTGGTAGCGTAAATTAATGCTTTACATTTCTTTCTCGGGTCCCTTGATGACAATGTCCATTTCTTTTTTGTTTGTTCTTTTGGCCAGAATAAAAGAGATAGAACCTTCAAAGGCAAGTTGCATTTATGTTGCTGAACTGAACCATTGCATCAGATAAAGCAACCCAGTTGATGCTGGATCTGATTCAATGCCTTTATTTTTTGTTTCCTTCCCTGCCTATGTACCTCCATATTTGTCACTTGTACTGTCCTTTATGCTGTCTTCTTTACGATCTTCTACGATTTTACAGCCCCTAAGTATCATTTGTCGATCTTTCCGCGACATAGATACATATACAACTGGATTTCCCCGTGGTAATGCCCAAGGTCTTACAGACATTTTTCGAGCAGTCAAGCACTGTCTACCTGGTCCTGTAAGTATGTGTAACGTGTTCTATAGACGATTATTGTGCTGAAAATTGTTAACAAATTTTCCGATTTAGATTTTTAATAAATCTGGTATACGTATGTCGGGAGTGTAGGAAGTCTAGTGATACCCTAGAGTCGAATTTCTTCATCAGGTTTTGCGCTATGTGGTATGATAGTTTCTTTTGCTACTTAAATTCCTTGTTGGTTGTCGACTTACTTCATGCTTATTTTTTCCTTTATTCTTTACGTGCGGGGTGGGTGGGTGGGGTGGGGGTGCATGAGGTGACTTTAAGATTGTTTGACTCATTAAATCTTTGACATTTTGGGTACCCAGGTCTGAGTAGTCCTGTAGATATCTTGATACTGATAATGTACCTAAACTATTAATCACCTGTGTGGCAGTACACTTTCATCTTAACTGCTAGCAAACAGCTACCAAAACAATGCACGAGATACGGGTCTGCAACTTCCAAATATGCTTCAAGGAAAAATGTTGGTGTTCGTATACCTGATGATCCTGTCTGTCAAGCAATTCTAGAAAAGTTGGATAGACCTCTAATATCCACAAGGTATTCTGACATCCTAGCATAGGGAAAATGAGTAAACTGATTCTTCCACAGTTTTACTTCTGTTTTGGGCTTACATACCTAATGATAGTTTTTGCTTTGGTTCAGCGTCAAGTCACCAAAGGAGGATGAGTGGATACTGGATCCCGTCATTATTGCTGATGTATATGGTCCAGAGGTACTATTCCACTAAAGGTTTGGCTGCTTTAGAGATCTTTTGGCACTTGCAATTTGCAAGCAACTCCATCCCCTTGTTTTTTGCATTTAGAGATCAACAAATTTTTGTAATTTTCTTTGTGTTATATGTCTCTTACATATGGATCTCTTATTGCTGCAACTCGTAAATTGGATATGCTTAATTCTTTTAATTCAGCTCCATTTCTTGTACATGTTTTTCTTTTGTCTCAGATCTATATGTGTATATTTGGTGTCCTACATGTTTTGCTTGGTCAGTGCCCTGTCCTATTATGGTGGATTGAATTTCTCTCTCTTTTCTTCTTTGGTTATGTTAGGGACTTGATTTTGTTGTTGATGCGGGTGTTCGAGTGGCTGATCCGTCTACTGTAGTTGATATGACTGAAAGTGCTCCTAGAATTATACGGCAGGGAAAGGTAAATCAGTAGTGTGTTTTTGGGACCTAATGTCTAGCATTCTGTTTGCCTACATGATTGCATATGTTTTAAATTAGTGAAAGCGGGCTAACAATTTTCTATGTATTCGGTATTCCAATTAGGTAAGTATGGTGACTGATAGCTGATTCAGAGTGCATACGCATAATATCCAATGAATTATGTGTCAAATTAGAGTCTAATACACATAGCCTGATAGCTCTTTATAATGAAAAAATCCTTGCTGCCTCTTATAGCTGCATAAGCACCTTCATCAGCGACAATTGCACTCGGGTTGGTTTTCTGTATTGTATAAGAGTCTGGCAGTACGTAAAAACTGTAATTTAGACAAAAGTTGCCAAAGAGATGACAATAGAAGAATGCTGCTGACTTTTGCTGTACATGATTTTGTTTCCCAGATGCAGAGACTTGCTTAAGCAACCACATCAAAATTTTCAAAGTAAATTAAATACTAAACTGGTATGTGTGGTGAAGAAATAATTAAACTGGATTGTAGAAGAGCGTCCCAATACCTGAGATACATCATGTTGAAAGGAGAAAACTGCTTAAGTATGTACCAGCAAGCATTAGTACTGAGTTGCTGTGTCAGAAGGATGCAAGGTTCATGAAACGGTTAAAATGCAGTTAGGAAACATATCATATAGACGCAATTGCGACAAGCTTAAGTGGAGATTCCAGATACCAGTTTATGCATTGTAGGAGAAATAACATGACTGGAAATTTATGGCATATTGCTCTTTAAAAAGGGATTTGCTTAAAAATAATGATCAGAAAATAGAACATGGCCGACTGGTTTCTGTCTTTGATCCATTTTTGTATTTATAATAAATCTATGATTGATTTGTTTACTGGTAAGGTGAATAAGTTAATAACCATGGATCAACTTTTTCTCTCTTCTCTCCTGTCAATTCTCTGAATTAGAATGTCTGCATTTATATGATGATCCTCTTTTGTTTTGCTTGTTTACATTTGTTCAGGGTCCTAAGCAGCCTTGGATGATAGCGGAAGATGATGATTCTCCTGTAGATGAATAGAATCCGTTGTTGCCGCTGTTTAAGTAAGAAGTACTGCTTAAAATGTACACTTCCTCAAGCCAGAGCTCTTGTACAGCGCACAGATAAGATGGTGAATCCCTCGCTTGATCTTGAACAGTCTTTTAGTCTTCATTAGTGTAGATTGCTGTAAATACTTAACGTGGTAAATCAAGAATCACATGTAATATTTTGCTTGTGTAAACTTTAAAGCATGTTATGATCACTCTCTCTT</genome_strand>
        <mrna_strand>ATTGGATTCTTGGAAGTTGGATCCAGTTGTTGAACTTCTTAAAGGAGGAGCTGTTGGAGTCATTCCCACTGACACTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGCAATAGTTTGTGATCTGAGCAGTCATTCAGCCATTGAACGTCTTCGTAG...........................................................................................................AATAAAAGAGATAGAACCTTCAAAG.................................................................................................................................................................................CCCCTAAGTATCATTTGTCGATCTTTCCGCGACATAGATACATATACAACTGGATTTCCCCGTGGTAATGCCCAAGGTCTTACAGACATTTTTCGAGCAGTCAAGCACTGTCTACCTGGTCCT.............................................................................................................................................................................................................................................................................................................................................................................................................TACACTTTCATCTTAACTGCTAGCAAACAGCTACCAAAACAATGCACGAGATACGGGTCTGCAACTTCCAAATATGCTTCAAGGAAAAATGTTGGTGTTCGTATACCTGATGATCCTGTCTGTCAAGCAATTCTAGAAAAGTTGGATAGACCTCTAATATCCACAAG.........................................................................................................CGTCAAGTCACCAAAGGAGGATGAGTGGATACTGGATCCCGTCATTATTGCTGATGTATATGGTCCAGAG..............................................................................................................................................................................................................................................................................................................................................GGACTTGATTTTGTTGTTGATGCGGGTGTTCGAGTGGCTGATCCGTCTACTGTAGTTGATATGACTGAAAGTGCTCCTAGAATTATACGGCAGGGAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCTAAGCAGCCTTGGATGATAGCGGAAGATGATGATTCTCCTGTAGATGAATAGAATCCGTTGTTGCCGCTGTTTAAGTAAGAAGTACTGCTTAAAATGTACACTTCCTCAAGCCAGAGCTCTTGTACAGCGCACAGATAAGATGGTGAATCCCTCGCTTGATCTTGAACAGTCTTTTAGTCTTCATTAGTGTAGATTGCTGTAAATACTTAACGTGGTAAATCAAGAATCACATGTAATATTTTGCTTGTGTAAACTTTAAAGCATGTTATGATCACTCTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586318" ref_strand="+" ref_description="SGN-U586318 Tomato 200607#2 [23 ESTs aligned] (*GB) gi|1710401|sp|P49730|RIR2_TOBAC (e_value=1e-174) Ribonucleoside-diphosphate reductase small chain (Ribonucleotide reductase) (R2 subunit); (*ATH) AT3G27060.1 (e_value=1e-153)  Symbol: None | ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative, similar to ribonucleotide reductase R2 (Nicotiana tabacum) GI:1044912; contains Pfam profile PF00268: Ribonucleotide reductase, small cha... ; (*SWP) sp|P49730|RIR2_TOBAC (e_value=8e-176) Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum; ">
      <seq>gcatctcttctcactaaaccctagaatttcttatccaaaacaaaatatgcctcttatcccagaagagcctttgctcgcctctaacccagatcgattctgtatgttcccaattcagtatccacagatttgggaaatgtacaagaaagccatggcatctttctggacggcagaagaagtcgatctctccaccgatactcgtcactgggaaaacctaacatccggtgaaaggcatttcatcactcatgttcttgccttttttgccgcctcagacggcatcgttttagagaacctcgctggaaggttcatgaaagatgtccaggttgccgaggctcgtgctttctatgggttccaaatcgccattgagaatatccattccgagatgtacagtttgctgttggagtcgtacatcaaggattctgacgaaaagagcaaattgttccgtgcaattgagacaatcccttgtgttgaaaagaaggcgaaatgggcccttcgttggatcgatgggtccgaaactttcgcggagcgtttggtggcttttgcttgtgttgaagggattttcttcagcggaagcttctgttcgatattttggttgaaaaaacgggggttaatgcctggattaaccttctcaaatgagttaatttcaagagacgaaggtttgcactgtgattttgcgtgtttgctttacagtttgctaaggacgaagctaactgaggagcgagtcaggggaattgttgcagatgctgtggagatagaaagggagttcgtgtgtgatgctcttccttgtgctctggtgggaatgaatggagatttgatgagtaaatacatagagtttgtagctgacagattgttggatgctttgggttatgacaagatgtacaatgctcagaatccattcgattggatggagctgattagtttacaagggaagactaatttctttgagaagagagttggggagtatcaaaaagcctcagttatgtccagtttgaatggtaatggtgatacccctgaattcaagctggatgaggacttttaaatttagtactctagctccttttttgtattttttgaaattagttttatgttcttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="120013" stop="121703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120312" g_stop="121403" g_length="1092"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1092" r_length="1092" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U586318" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1092</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120312" e_stop="121403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATCTCTTCTCACTAAACCCTAGAATTTCTTATCCAAAACAAAATATGCCTCTTATCCCAGAAGAGCCTTTGCTCGCCTCTAACCCAGATCGATTCTGTATGTTCCCAATTCAGTATCCACAGATTTGGGAAATGTACAAGAAAGCCATGGCATCTTTCTGGACGGCAGAAGAAGTCGATCTCTCCACCGATACTCGTCACTGGGAAAACCTAACATCCGGTGAAAGGCATTTCATCACTCATGTTCTTGCCTTTTTTGCCGCCTCAGACGGCATCGTTTTAGAGAACCTCGCTGGAAGGTTCATGAAAGATGTCCAGGTTGCCGAGGCTCGTGCTTTCTATGGGTTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGAGTCGTACATCAAGGATTCTGACGAAAAGAGCAAATTGTTCCGTGCAATTGAGACAATCCCTTGTGTTGAAAAGAAGGCGAAATGGGCCCTTCGTTGGATCGATGGGTCCGAAACTTTCGCGGAGCGTTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTACAGTTTGCTAAGGACGAAGCTAACTGAGGAGCGAGTCAGGGGAATTGTTGCAGATGCTGTGGAGATAGAAAGGGAGTTCGTGTGTGATGCTCTTCCTTGTGCTCTGGTGGGAATGAATGGAGATTTGATGAGTAAATACATAGAGTTTGTAGCTGACAGATTGTTGGATGCTTTGGGTTATGACAAGATGTACAATGCTCAGAATCCATTCGATTGGATGGAGCTGATTAGTTTACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCAGAAAGCCTCAGTTATGTCCAGTTTGAATGGTAATGGTGATACCCATGAATTCAAGCTGGATGAGGACTTTTAAATTTAGTACTCTAGCTCCTTTTTTGTATTTTTTGAAATTAGTTTTATGTTCTTCTT</genome_strand>
        <mrna_strand>GCATCTCTTCTCACTAAACCCTAGAATTTCTTATCCAAAACAAAATATGCCTCTTATCCCAGAAGAGCCTTTGCTCGCCTCTAACCCAGATCGATTCTGTATGTTCCCAATTCAGTATCCACAGATTTGGGAAATGTACAAGAAAGCCATGGCATCTTTCTGGACGGCAGAAGAAGTCGATCTCTCCACCGATACTCGTCACTGGGAAAACCTAACATCCGGTGAAAGGCATTTCATCACTCATGTTCTTGCCTTTTTTGCCGCCTCAGACGGCATCGTTTTAGAGAACCTCGCTGGAAGGTTCATGAAAGATGTCCAGGTTGCCGAGGCTCGTGCTTTCTATGGGTTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGAGTCGTACATCAAGGATTCTGACGAAAAGAGCAAATTGTTCCGTGCAATTGAGACAATCCCTTGTGTTGAAAAGAAGGCGAAATGGGCCCTTCGTTGGATCGATGGGTCCGAAACTTTCGCGGAGCGTTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTACAGTTTGCTAAGGACGAAGCTAACTGAGGAGCGAGTCAGGGGAATTGTTGCAGATGCTGTGGAGATAGAAAGGGAGTTCGTGTGTGATGCTCTTCCTTGTGCTCTGGTGGGAATGAATGGAGATTTGATGAGTAAATACATAGAGTTTGTAGCTGACAGATTGTTGGATGCTTTGGGTTATGACAAGATGTACAATGCTCAGAATCCATTCGATTGGATGGAGCTGATTAGTTTACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCAAAAAGCCTCAGTTATGTCCAGTTTGAATGGTAATGGTGATACCCCTGAATTCAAGCTGGATGAGGACTTTTAAATTTAGTACTCTAGCTCCTTTTTTGTATTTTTTGAAATTAGTTTTATGTTCTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583760" ref_strand="+" ref_description="SGN-U583760 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|147815339|emb|CAN67772.1| (e_value=2e-94) hypothetical; (*ATH) AT5G14140.1 (e_value=4e-79) | Symbol: None | zinc finger (C2H2 type) family protein, contains Pfam profile: PF00096 zinc finger, C2H2 type | chr5:4561158-4564602 FORWARD | Aliases: MUA22.14, MUA22_14; (*SWP) sp|Q8NB15|ZN511_HUMAN (e_value=9e-22) Zinc finger protein 511 OS=Homo sapiens GN=ZNF511; ">
      <seq>gacataacaaaagatcacatactttgcaaaatcaactttacattattttttaccttttaaattttaggactttcgagaaaggaaaaaacgtcgcaaaacggcaaaagcataggtagggaatgaaattcaaaattaatggcgatggagtttgataggcaaatcgaattagggtttccgttctggagcccaactcgtcgacgttttggtcctgatgatcccttcttcgcttacggtaacattcaaagagagcttctcgctaagcaggttgcattggatttgactgaagaagagaaccagttagttcaaaatagtatcacagatgacgaaatcagcaatctcttctgtccaatcattggttgtggtgcacagatgaaaaatctggatgactttgaagaccactatgttacacgacatactgcatcttgttctgtatgctctcgagtttacccaacatcacgcctgctcagcatacatgtgtcagaggctcatgattccttttttcaggcaaaagctgctcgaggctttcccatgtatgagtgccttgtggaaggctgtgatatcaagttgaaaagctacaaaagcaggcagcaacatcttgttgacaagcataaatttccagcatcttatgagttcttcagaaaagctcgtccatcaaaaaaacagaggctgaagccgcatcataaacaagcatctaataagactcaggagaagtcaagtgcaatgcaagttgaggaagaaacaatagacaatctcgtttcagcggtatcgaaattaaccacttcggattctccttcagcaatcagctttggccgcagtagggctcgtggattgtcatttgtgcctcgtgcagttaatcggcagagaggaccagtcacctcaaccggtggaacaaaaaactagtggcatgccaatggaatcttgaagcatctgaaaatgtcaggctcatgttaagaaagatatgatctgaagctgattggctacaacacaatgtggtgatggttccaacgtgttaaaccactgctctttatggcatgctcaaatttttttggatgtcttgtcaaaggttgtcacacctctggtggctgcaattaagagaactaagtttttctcctatcatgcccaaacatgtctaatttttcttgttaatgaattatagaaaagattgtggttttcatactaaagcaattagcagatatcaatccaattagttggttatatctcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="125893" stop="121622"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125593" g_stop="125330" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125329" i_stop="125246" i_length="84">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="125245" g_stop="125178" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="332" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="125177" i_stop="123944" i_length="1234">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123943" g_stop="123745" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="531" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="123744" i_stop="122613" i_length="1132">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122612" g_stop="121919" g_length="694"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="1225" r_length="694" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U583760" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1225</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125593" e_stop="125330"/>
          <exon e_start="125245" e_stop="125178"/>
          <exon e_start="123943" e_stop="123745"/>
          <exon e_start="122612" e_stop="121919"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATAACAAAAGATCACATACTTTGCAAAATCAACTTTACATTATTTTTTATTTTTTAAATTTTAGGACTTTCGAGAAAGGAAAAAACGTCGCAAAACGGCAAAAGCATAGGTAGGGAATGAAATTCAAAATTAATGGCGATGGAGTTTGATAGGCAAATCGAATTAGGGTTTCCGTTCTGGAGCCCAACTCGTCGACGTTTTGGTCCTGATGATCCCTTCTTCGCTTACGGTAACATTCAAAGAGAGCTTCTCGCTAAGCAGGTTCGTTCCTTTTCCCTCCTCTCTATCCTCTCCATAATTTGAACTAGCGATCTATCTGTTCACTCCCTTTTTCTTCATTTCCAGGTTGCATTGGATTTGACTGAAGAAGAGAACCAGTTAGTTCAAAATAGTATCACAGATGACGAAATCAGGTATACCTATTGAAGCTCTTCCATAGTTTATCGGATTTATATACTGAGAAACATCAGAAGACAGTGACATTAAACTATAATTTTGAAGGATATTTTAACAGAATTCAGGTTCACGTTCTTAATCAGCTGCTCTTCCCTTTTTGTTGAGATTGAGGAAATATGCACTTATCTATGTGTCTGCTAGTAGCCTCAAGTACAAAAGAGAAGTTGGAATAGTTAGGATATACGTTAGGACGTGGTTGCAAAATTCTAATTAAATATGTTTTGCTGTTTTTTGTGTTGCAAAGTCGAGTGAAAGATCAGAGCCTTGATTATAGATTAAGAATAGGTGAGAATCGTGAGATGTTGATCCTTAGATACTAATATCTTCATGATGTCAGCTGTCTTTACATGCTTTTTAATGCAGTAACCTGCGAAGGTTGCTGCAGTGACGAGTTTAATACTGGGCATTTCTTTATAGTTGAATGTTGTTGGCTTTTTATCAAACACCCTTACATACTCAAGCGAAGGGTATTAAACACTTCTTGGTATACAGATAAGTTGAGAGCTGCATCCGCACAAGGAAGGTTAGGTGCACAAGCAAAAGGAAGATGGTGACAGAACTGAAAGGGAAGAAAAATTCCCCAAAAGAGTGCTTAATGTCAGTATACTGATGAATTTTCTAATAAAAATAAGCTTAGGAAAGCGGGCAACGGCTACCTCTTTTTTTTCAGTTCTGTGGTCAGCCCAAAATCGAGAACGCAGAAGTTAAGGGCTGGATTAAATTGTATCTTTATGTCTAGATATTTACAGGAGCTGAGATAATAAAGAAGAAACTAGAGGCTAACTTTACCATATATCGGTTTCCACTTTCTGGTACTAGTCAGAATATTGATCTGCAGGAAGTTTTGCATAGATTGAATAATGACCTAGTTTTGTGTTTACTATGTGATACAATCACTGTATCACTTTCTCAGATCTTCTTGGCCTAGCCACAATATGCTATAGTGCTCATTTGCACCTGCATTTACTGGTGCTGAGGTCCATTTTTCTTCTTTATTACTGTAAATTATCAAGATCCTAATTATGTATTGTTTAACTTGTTTTTTTTTTTTTTAAATGGATGTCATGTTCTTAACTTGTTATTTTTCTGTCAATCTTGAGGTGATTTCTGGGTTTGTTTACTATAACAAATTTTAGGGGGATGTATTTATACATAACTAATTTCTGATAAAATTGATTAAATGCTTGACAGCAATCTCTTCTGTCCAATCATTGGTTGTGGTGCACAGATGAAAAATCTGGATGACTTTGAAGACCACTATGTTACACGACATACTGCATCTTGTTCTGTATGCTCTCGAGTTTACCCAACATCACGCCTGCTCAGCATACATGTGTCAGAGGCTCATGATTCCTTTTTTCAGGCAAAAGCTGCTCGAGGCTTTCCCATGGTAACATTTTATCTCATAGTTTTCTTTAGGGTGTCCCATAGAAAATGAGGCAAACCCCCTTACACTGTTTAAACGTATTAGGAATATATCTGAGAAGGAAGAAAGTTGAATCAGCAAAATCACACGATTAAACAACTGATGAATTGTTTGTTGTATCATCCAATTCGCGCTCGCTCTAAAAAATGGACTATCCATGCTATAAATAGATAATCATGAAGAACTGTCATTTTCTAGAAAACACTTCTTTCGGTAATAAATCAATCCTTGCACTAAAAAGAGATTTCTAAAACAAACAATGGCTGGAGAATTAAGACTGTACCGACTTTAAATCTGGTATAATTTTTTTCTTCTCTCTATTTCAAAGTAAAGTATAGTCTGAATTCTCCAGCCATTGTCTATTTCCGAAATCATTTTGAGGTAAGGAATTGATTTATTATTGAAAGAAGAGTTCTCTGGTAAATGACAGTTCTTGTTGATTCTCTATTTATATTGCGAATGACTTTTTAAGAGTGAGCATGAATTGGATGATTCAACAAACAGATTTTCAGTTGGTGAATCATGCCTTTTTGTTGATTCAACTTTCTTCCTTCTCATGCATATTCTAAATGTAGCATGCAGTTCCTGTTTGTTAAGGTAATAGCTGAAGGGATTGTGCAGGCACATACGTGAACAGTTTAGGTGCATCGTCTGGGTTAATGTGGGGGTTATACATAACCCATCCTGAATTTGCATCATCTTGCCCTGTCCCTTCCCAAGGAGATAGATGTTTGCATGTCTTTCCAAGTTTATAAGCTGCATGTTATCGGCTTTCTTGATCTTAGTGGTTTACTGGTTGAGGAGTTAACTTCTGACCACTAGGTCAAGTGTCAAGTCTGATAAACAGAACAAAACCAACAGGATAGGTGTTCTAAAATAAAATACTTTTAAAGCTTCTGTAAAATTGTAAATACATAAATAAATTATAAGCTGCATGAATCTTTGTTGCAGAATTGGCTCTCTGATTGTGGTTGGTCATGTATCTTGTATGTGTTTAGTCTGTTCAAAGAGAGTTATGTATGAGTAACAGTCTGTTTCAATCTTTTTTTAAAATGTCTGGATGTAGCTGTTTACTGGAATTCTTGTTGTCCTGTAGTATGAGTGCCTTGTGGAAGGCTGTGATATCAAGTTGAAAAGCTACAAAAGCAGGCAGCAACATCTTGTTGACAAGCATAAATTTCCAGCATCTTATGAGTTCTTCAGAAAAGCTCGTCCATCAAAAAAACAGAGGCTGAAGCCGCATCATAAACAAGCATCTAATAAGACTCAGGAGAAGTCAAGTGCAATGCAAGTTGAGGAAGAAACAATAGACAATCTCGTTTCAGCGGTATCGAAATTAACCACTTCGGATTCTCCTTCAGCAATCAGCTTTGGCCGCAGTAGGGCTCGTGGATTGTCATTTGTGCCTCGTGCAGTTAATCGGCAGAGAGGACCAGTCACCTCAACCGGTGGAACAAAAAACTAGTGGCATGCCAATGGAATCTTGAAGCATCTGAAAATGTCAGGCTCATGTTAAGAAAGATATGATCTGAAGCTGATTGGCTACAACACAATGTGGTGATGGTTCCAACGTGTTAAACCACTGCTCTTTATGGCATGCTCAAATTTTTTTGGATGTCTTGTCAAAGGTTGTCACACCTCTGGTGGCTGCAATTAAGAGAACTAAGTTTTTCTCCTATCATGCCCAAACATGTCTAATTTTTCTTGTTAATGAATTATAGAAAAGATTGTGGTTTTCATACTAAAGCAATTAGCAGATATCAATCCAATTAGTTGGTTATATCTCATTT</genome_strand>
        <mrna_strand>GACATAACAAAAGATCACATACTTTGCAAAATCAACTTTACATTATTTTTTACCTTTTAAATTTTAGGACTTTCGAGAAAGGAAAAAACGTCGCAAAACGGCAAAAGCATAGGTAGGGAATGAAATTCAAAATTAATGGCGATGGAGTTTGATAGGCAAATCGAATTAGGGTTTCCGTTCTGGAGCCCAACTCGTCGACGTTTTGGTCCTGATGATCCCTTCTTCGCTTACGGTAACATTCAAAGAGAGCTTCTCGCTAAGCAG....................................................................................GTTGCATTGGATTTGACTGAAGAAGAGAACCAGTTAGTTCAAAATAGTATCACAGATGACGAAATCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCTCTTCTGTCCAATCATTGGTTGTGGTGCACAGATGAAAAATCTGGATGACTTTGAAGACCACTATGTTACACGACATACTGCATCTTGTTCTGTATGCTCTCGAGTTTACCCAACATCACGCCTGCTCAGCATACATGTGTCAGAGGCTCATGATTCCTTTTTTCAGGCAAAAGCTGCTCGAGGCTTTCCCATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAGTGCCTTGTGGAAGGCTGTGATATCAAGTTGAAAAGCTACAAAAGCAGGCAGCAACATCTTGTTGACAAGCATAAATTTCCAGCATCTTATGAGTTCTTCAGAAAAGCTCGTCCATCAAAAAAACAGAGGCTGAAGCCGCATCATAAACAAGCATCTAATAAGACTCAGGAGAAGTCAAGTGCAATGCAAGTTGAGGAAGAAACAATAGACAATCTCGTTTCAGCGGTATCGAAATTAACCACTTCGGATTCTCCTTCAGCAATCAGCTTTGGCCGCAGTAGGGCTCGTGGATTGTCATTTGTGCCTCGTGCAGTTAATCGGCAGAGAGGACCAGTCACCTCAACCGGTGGAACAAAAAACTAGTGGCATGCCAATGGAATCTTGAAGCATCTGAAAATGTCAGGCTCATGTTAAGAAAGATATGATCTGAAGCTGATTGGCTACAACACAATGTGGTGATGGTTCCAACGTGTTAAACCACTGCTCTTTATGGCATGCTCAAATTTTTTTGGATGTCTTGTCAAAGGTTGTCACACCTCTGGTGGCTGCAATTAAGAGAACTAAGTTTTTCTCCTATCATGCCCAAACATGTCTAATTTTTCTTGTTAATGAATTATAGAAAAGATTGTGGTTTTCATACTAAAGCAATTAGCAGATATCAATCCAATTAGTTGGTTATATCTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568927" ref_strand="+" ref_description="SGN-U568927 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157341118|emb|CAO49025.1| (e_value=4e-132) unnamed; (*ATH) AT4G37530.1 (e_value=7e-107)  Symbol: None | peroxidase, putative, similar to peroxidase (Arabidopsis thaliana) gi:1402906:emb:CAA66958; identical to Pfam profile PF00141: Peroxidase; identical to cDNA peroxidase ATP37 GI:18874553 | chr4:17634778-17636282 FORWARD | Aliases: F19F... ; (*SWP) sp|Q9SZE7|PER51_ARATH (e_value=6e-106) Peroxidase 51 OS=Arabidopsis thaliana GN=PER51; ">
      <seq>gtacttgagagactaaggcaacgtacatganctatgaagaggaaaatagtcacgtggaagtagttaattgggtaagctgcaatataatagatggtgcaccgtccacccaccaagctcatcaaataaaaaacaaattattcattactcagtgttcacatcaaactatattaatttattcgataaaaacactctacttgggaagtttttccactcatccagctagtacaacctttgggacttggaacaagtataacgacctgtaacaaatcagtgaaaaaagtatcagccttcatttaccttcctgattacttttagtatatatatgtttatttattctgctactacaagtcattggatggtagagggagaaaagtagaagagagagaaaagaaggatcaatacttttcatcgacaaagtaaaaaatggagagattgaggggcttgtatgtgttgatcttggcaatcatattaatcctcggcggagctgaaggggagctagtagagaacttctatggttttacttgtcctaatgtggaatttatagttcagcaagctgtgtctctaaagttcagccagacttttgtcactattccagcgactttgcgtctctttttccatgattgctttgttgaggggtgtgacgcgtctgttatgatagcttcaccaaatggagacgcggaaaaggattccaaggataacctttcccttgcaggagatggctttgacactgtggtaaaggcaaaacaagcagtagaggctcagtgccctggagtagtatcatgtgcagatatcttagctatcgccactagagatgttgtggtgctggcaggaggcccttcatacaatgtagaattgggacgtcgtgatgggctcatctcccaggcatctcgggttgctggaaaattgccagaacctgacttcaatctcattcaactgaacactatgtttgccagacacaatctcagccagtttgacatgatagctctttcaggggctcacacacttggcttctctcattgtgaccgttttgcaaaccgtctctactcatttaccccatccaaccctgttgacccttctttggatccagaatatgctaaagaacttaaggatatgtgccctcaaaatgtagatccaactatcgctataaacatggaccctgcaactccacgaacctttgacaatgagtattacaagaatctggttaaaggaaagggtttgttcacctcagatcaggtgctcttcactgatgaatcttctcaaggcactgttagtgattttgctaataatgctttcgacttcaatggagcttttgtcactgcaatgagaaaactcggaagggttggggtcaaaactggtggccaaggtgaaataagactggactgcaccaggtttaactcatgaggtccatgttctaccttcaacaaaaggaaaaaagatgctattttgtaaatccctgttacaatagtttatttttgtttttggcaatatttgatgtaattggcttaaataaatcacgtgtataaggtctagagcttggatttctttcgaattttgcgatcattcttgtattggacacttgcatgaatccaatcccctgtgttactgaattcagttttgacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="126874" stop="129483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127173" g_stop="127805" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127806" i_stop="128089" i_length="284">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="128090" g_stop="128281" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="825" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="128282" i_stop="128387" i_length="106">
            <donor d_prob="0.091" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128388" g_stop="129183" g_length="796"/>
          <reference_exon_boundary r_type="cDNA" r_start="826" r_stop="1622" r_length="797" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U568927" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1621</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568927" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127173" e_stop="127805"/>
          <exon e_start="128090" e_stop="128281"/>
          <exon e_start="128388" e_stop="129183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTTGAGAGACTAAGGCAACGTACATGAAGTATGAAGAGGAAAATAGTCACGTGGAAGTAGTTAATTGGGTAAGCTGCAATATAATAGATGGTGCACCGTCCACCCACCAAGCTCATCAAATAAAAAACAAATTATTCATTACTCAGTGTTCACATCAAACTATATTAATTTATTCGATAAAAACACTCTACTTGGGAAGTTTTTCCACTCATCCAGCTAGTACAACCTTTGGGACTTGGAACAAGTATAACGACCTGTAACAAATCAGTGAAAAAAGTATCAGCCTTCATTTACCTTCCTGATTACTTTTAGTATATATATGTTTATTTATTCTGCTACTACAAGTCATTGGATGGTAGAGGGAGAAAAGTAGAAGAGAGAGAAAAGAAGGATCAATACTTTTCATCGACAAAGTAAAAAATGGAGAGATTGAGGGGCTTGTATGTGTTGATCTTGGCAATCATATTGATCCTCGGCGGAGCTGAAGGGGAGCTAGTAGAGAACTTCTATGGTTTTACTTGTCCTAATGTGGAATTTATAGTTCAGCAAGCTGTGTCTCTAAAGTTCAGCCAGACTTTTGTCACTATTCCAGCGACTTTGCGTCTCTTTTTCCATGATTGCTTTGTTGAGGTAATCTTCTGCTACAATTTCTCTCTAGAATTAAGCTGTTACTCATATCGCAGTGTCCCACATTAGTTCGTTGAATTATGGTATAAGTTTTAGAACAAGCAAGAATAATTACTCCATTTTTGTTAACATAAAAGAGATCAAGAGACTTCTAACTCTATACTTTAAAAATAGCTGCTACCACCAATATTCTGGGTCCTGTTCTGGTTGGCAGCAAAAAATTGGCATTCTTCGTCTTCCCAAATTAAAATTGTTCATCTCTTATTCTCTTTTGCACATTTCCTCAGGGGTGTGACGCGTCTGTTATGATAGCTTCACCAAATGGAGACGCGGAAAAGGATTCCAAGGATAACCTTTCCCTTGCAGGAGATGGCTTTGACACTGTGGTAAAGGCAAAACAAGCAGTAGAGGCTCAGTGCCCTGGAGTAGTATCATGTGCAGATATCTTAGCTATCGCCACTAGAGATGTTGTGGTGCTGGTAATCGAGGACACAGAAACCATATACCCCTTTTTTTTGGCTTTTTCTTCATTTACCATAATATGTAGACTGACACTAGTTCATTTCCTTTGGTGAAAACATTCAGGCAGGAGGCCCTTCATACAATGTAGAATTGGGACGTCGTGATGGGCTCATCTCCCAGGCATCTCGGGTTGCTGGAAAATTGCCAGAACCTGACTTCAATCTCATTCAACTGAACACTATGTTTGCCAGACACAATCTCAGCCAGTTTGACATGATAGCTCTTTCAGGGGCTCACACACTTGGCTTCTCTCATTGTGACCGTTTTGCAAACCGTCTCTACTCATTTACCCCATCCAACCCTGTTGACCCTTCTTTGGATCCAGAATATGCTAAAGAACTTAAGGATATGTGCCCTCAAAATGTAGATCCAACTATCGCTATAAACATGGACCCTGCAACTCCACGAACCTTTGACAATGAGTATTACAAGAATCTGGTTAAAGGAAAGGGTTTGTTCACCTCAGATCAGGTGCTCTTCACTGATGAATCTTCTCAAGGCACTGTTAGTGATTTTGCTAATAATGCTTTCGACTTCAATGGAGCTTTTGTCACTGCAATGAGAAAACTCGGAAGGGTTGGGGTCAAAACTGGTGGCCAAGGTGAAATAAGACTGGACTGCACCAGGTTTAACTCATGAGGTCCATGTTCTACCTTCAACAAAAGGAAAAAAGATGCTATTTTGTAAATCCCTGTTACAATAGTTTATTTTTGTTTTTGGCAATATTTGATGTAATTGGCTTAAATAAATCACGTGTATAAGGTCTAGAGCTTGGATTTCTTTCGAATTTTGCGATCATTCTTGTATTGGACACTTGCATGAATCCAAT-CCCTGTGTTACTGAATTCAGTTTTGACTTC</genome_strand>
        <mrna_strand>GTACTTGAGAGACTAAGGCAACGTACATGANCTATGAAGAGGAAAATAGTCACGTGGAAGTAGTTAATTGGGTAAGCTGCAATATAATAGATGGTGCACCGTCCACCCACCAAGCTCATCAAATAAAAAACAAATTATTCATTACTCAGTGTTCACATCAAACTATATTAATTTATTCGATAAAAACACTCTACTTGGGAAGTTTTTCCACTCATCCAGCTAGTACAACCTTTGGGACTTGGAACAAGTATAACGACCTGTAACAAATCAGTGAAAAAAGTATCAGCCTTCATTTACCTTCCTGATTACTTTTAGTATATATATGTTTATTTATTCTGCTACTACAAGTCATTGGATGGTAGAGGGAGAAAAGTAGAAGAGAGAGAAAAGAAGGATCAATACTTTTCATCGACAAAGTAAAAAATGGAGAGATTGAGGGGCTTGTATGTGTTGATCTTGGCAATCATATTAATCCTCGGCGGAGCTGAAGGGGAGCTAGTAGAGAACTTCTATGGTTTTACTTGTCCTAATGTGGAATTTATAGTTCAGCAAGCTGTGTCTCTAAAGTTCAGCCAGACTTTTGTCACTATTCCAGCGACTTTGCGTCTCTTTTTCCATGATTGCTTTGTTGAG............................................................................................................................................................................................................................................................................................GGGTGTGACGCGTCTGTTATGATAGCTTCACCAAATGGAGACGCGGAAAAGGATTCCAAGGATAACCTTTCCCTTGCAGGAGATGGCTTTGACACTGTGGTAAAGGCAAAACAAGCAGTAGAGGCTCAGTGCCCTGGAGTAGTATCATGTGCAGATATCTTAGCTATCGCCACTAGAGATGTTGTGGTGCTG..........................................................................................................GCAGGAGGCCCTTCATACAATGTAGAATTGGGACGTCGTGATGGGCTCATCTCCCAGGCATCTCGGGTTGCTGGAAAATTGCCAGAACCTGACTTCAATCTCATTCAACTGAACACTATGTTTGCCAGACACAATCTCAGCCAGTTTGACATGATAGCTCTTTCAGGGGCTCACACACTTGGCTTCTCTCATTGTGACCGTTTTGCAAACCGTCTCTACTCATTTACCCCATCCAACCCTGTTGACCCTTCTTTGGATCCAGAATATGCTAAAGAACTTAAGGATATGTGCCCTCAAAATGTAGATCCAACTATCGCTATAAACATGGACCCTGCAACTCCACGAACCTTTGACAATGAGTATTACAAGAATCTGGTTAAAGGAAAGGGTTTGTTCACCTCAGATCAGGTGCTCTTCACTGATGAATCTTCTCAAGGCACTGTTAGTGATTTTGCTAATAATGCTTTCGACTTCAATGGAGCTTTTGTCACTGCAATGAGAAAACTCGGAAGGGTTGGGGTCAAAACTGGTGGCCAAGGTGAAATAAGACTGGACTGCACCAGGTTTAACTCATGAGGTCCATGTTCTACCTTCAACAAAAGGAAAAAAGATGCTATTTTGTAAATCCCTGTTACAATAGTTTATTTTTGTTTTTGGCAATATTTGATGTAATTGGCTTAAATAAATCACGTGTATAAGGTCTAGAGCTTGGATTTCTTTCGAATTTTGCGATCATTCTTGTATTGGACACTTGCATGAATCCAATCCCCTGTGTTACTGAATTCAGTTTTGACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604650" ref_strand="+" ref_description="SGN-U604650 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>taaagcttctaacagcaaaaaaaaaggcagcttcgccatctccattgtcttgctcacatcctggaggaagttctggttatggctaacaatcacctcaacgaaatgctcttggatccatgagctggttgagagtatctgcgcaaatcactcaaaacttctaaccaagctttcacttgccggatgaattatgtacgagattttccgtaaagactagtgtatacagtctttgttcggtaaaccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="+" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="129238" stop="130077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129537" g_stop="129777" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="+" ref_id="SGN-U604650" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>241</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129537" e_stop="129777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCTTCTAACAGC-AAAAAAAAGGCAGCTTCGCCATCTCCATTGTCTTGCTCACATCCTGGAGGAAGTTCTGGTTATGGCTAACAATCACCTCAACGAAATGCTCTTGGATCCATGAGCTGGTTGAGAGTATCTGCGCAAATCACTCAAAACTTCTAACCAAGCTTTCACTTGCCGGATGAATTATGTACGAGATTTTCCGTAAAGACTAGTGTATACAGTCTTTGTTCGGTAAACCAG</genome_strand>
        <mrna_strand>TAAAGCTTCTAACAGCAAAAAAAAAGGCAGCTTCGCCATCTCCATTGTCTTGCTCACATCCTGGAGGAAGTTCTGGTTATGGCTAACAATCACCTCAACGAAATGCTCTTGGATCCATGAGCTGGTTGAGAGTATCTGCGCAAATCACTCAAAACTTCTAACCAAGCTTTCACTTGCCGGATGAATTATGTACGAGATTTTCCGTAAAGACTAGTGTATACAGTCTTTGTTCGGTAAACCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588188" ref_strand="+" ref_description="SGN-U588188 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147853498|emb|CAN82292.1| (e_value=2e-63) hypothetical; (*ATH) AT3G01930.1 (e_value=3e-52) | Symbol: None | nodulin family protein, similar to nodulin-like protein (Arabidopsis thaliana) GI:3329368, nodule-specific protein Nlj70 (Lotus japonicus) GI:3329366 | chr3:319068-320955 REVERSE | Aliases: F28J7.26; ">
      <seq>ccattcccctgatcatgcttcacttatatttatgattgctgtgggaccggcaatggtggctatcgccctcatgtttataattaggcctgttggtggccatagacaagtcacaccatctgatagtttcagtttttcattaatttacagcatttgcctcattttagcttcttacctgatgggcgtcatgcttgttcaagacctcgttgatgttagccacacagtcactacaatcttcactgggattttgtttgttttattgcttattcctgtggtgattcccatctcattgactttctcgcaagaaactagagtaccatcagaagaggctcttttatctgagtcacaaaaacaagatcctggagtatctggacatgatcaggaaattatatttagtgaggttgaagatgagaagcctaaggatgtagacttgcttccagcattagaaaggcaaaaaagaattgcccaactgcaagcaaaactagcccaagcagctgcagaaggagcagtgagggtcaaaagaagacggacccctcatagaggggaggactttaccctaatgcaggctttgataaaggcagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="131399" stop="130220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131099" g_stop="130520" g_length="580"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="580" r_length="580" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U588188" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131099" e_stop="130520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTCCCCTGATCATGCTTCACTTATATTTATGATTGCTGTGGGACCGGCAATGGTGGCTATCGCCCTCATGTTTATAATTAGGCCTGTTGGTGGCCATAGACAAGTCAGACCATCTGATAGTTTCAGTTTTTCATTAATTTACAGCATTTGCCTCATTTTAGCTTCTTACCTGATGGGCGTCATGCTTGTTCAAGACCTCGTTGATGTTAGCCACACAGTCACTACAATCTTCACTGGGATTTTGTTTGTTTTATTGCTTATTCCTGTGGTGATTCCCATCTCATTGACTTTCTCGCAAGAAACTAGAGTACCATCAGAAGAGGCTCTTTTATCTGAGTCACAAAAACAAGATCCTGGAGTATCTGGACATGATCAGGAAATTATATTTAGTGAGGTTGAAGATGAGAAGCCTAAGGATGTAGACTTGCTTCCAGCATTAGAAAGGCAAAAAAGAATTGCCCAACTGCAAGCAAAACTAGCCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTCAAAAGAAGACGGACCCCTCATAGAGGGGAGGACTTTACCCTAATGCAGGCTTTGATAAAGGCAGAC</genome_strand>
        <mrna_strand>CCATTCCCCTGATCATGCTTCACTTATATTTATGATTGCTGTGGGACCGGCAATGGTGGCTATCGCCCTCATGTTTATAATTAGGCCTGTTGGTGGCCATAGACAAGTCACACCATCTGATAGTTTCAGTTTTTCATTAATTTACAGCATTTGCCTCATTTTAGCTTCTTACCTGATGGGCGTCATGCTTGTTCAAGACCTCGTTGATGTTAGCCACACAGTCACTACAATCTTCACTGGGATTTTGTTTGTTTTATTGCTTATTCCTGTGGTGATTCCCATCTCATTGACTTTCTCGCAAGAAACTAGAGTACCATCAGAAGAGGCTCTTTTATCTGAGTCACAAAAACAAGATCCTGGAGTATCTGGACATGATCAGGAAATTATATTTAGTGAGGTTGAAGATGAGAAGCCTAAGGATGTAGACTTGCTTCCAGCATTAGAAAGGCAAAAAAGAATTGCCCAACTGCAAGCAAAACTAGCCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTCAAAAGAAGACGGACCCCTCATAGAGGGGAGGACTTTACCCTAATGCAGGCTTTGATAAAGGCAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588187" ref_strand="+" ref_description="SGN-U588187 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|18395988|ref|NP_566157.1| (e_value=8e-70) expressed protein [Arabidopsis thaliana]; (*ATH) AT3G01930.2 (e_value=4e-72) | Symbol: None | nodulin family protein, similar to nodulin-like protein (Arabidopsis thaliana) GI:3329368, nodule-specific protein Nlj70 (Lotus japonicus) GI:3329366 | chr3:319068-321565 REVERSE | Aliases: None; ">
      <seq>aagttgtttactcatttattatttattacgtacatacatcacggaatcaaaatatatagagagtagtttttaatattcattacggatgaaaagggacagacaggtcctttgacttcccccaagaaagatttagaatctgaattcccaaggcaattttgatctaacaatggttcgtttgaaagagagatttagtttgttcttcaataacagatggcttgtattcgtagctgcaatgtggattcagagttttgctggcattgggtatttattcggcagtatttctcccatcattaagagctctttgaattacaatcagaggcaagtagctagattgggtgttgctaaggacttgggcgatagtgttggatttctggctgggactttatccgaaatcttgcctttatgggctgctcttcttgtgggtgctgttcagaactttattggttatggctgggtttggctcatcgtcaccggccgatctcctactcttcctttatggcttatgtgctttcttatatttataggaacaaatggagaaacctactttaatacagccgcacttgtctcangtgtgcaaaatttccctaaaagccgtggccctgtggtgggaatacttaangganttgctgggttgggtggtgcaattatgactcnntatatgcactgatccnttcccctgatcatgcttcacttatatttatgattgctgtggancggcnntggtggctatcgccctcatgttna</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0204A09-iMAMa/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0204A09.1" temp_strand="-" temp_description="C02HBa0204A09.1  AC215418.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0204A09 sequenced_by:kribb upload_account_name:korea">
        <position start="132763" stop="130722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132463" g_stop="131962" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131961" i_stop="131267" i_length="695">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131266" g_stop="131023" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="744" r_length="242" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204A09.1" gen_strand="-" ref_id="SGN-U588187" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204A09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132463" e_stop="131962"/>
          <exon e_start="131266" e_stop="131023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTGTTTACTCATTTATTATTTATTACGTACATACATCACGGAATCAAAATATATAGAGAGTAGTTTTTAATATTCATTACGGATGAAAAGGGACAGACAGGTCCTTTGACTTCCCCCAAGAAAGATTTAGAATCTGAATTCCCAAGGCAATTTTGATCTAACAATGGTTCGTTTGAAAGAGAGATTTAGTTTGTTCTTCAATAACAGATGGCTTGTATTCGTAGCTGCAATGTGGATTCAGAGTTTTGCTGGCATTGGGTATTTATTCGGCAGTATTTCTCCCATCATTAAGAGCTCTTTGAATTACAATCAGAGGCAAGTAGCTAGATTGGGTGTTGCTAAGGACTTGGGCGATAGTGTTGGATTTCTGGCTGGGACTTTATCCGAAATCTTGCCTTTATGGGCTGCTCTTCTTGTGGGTGCTGTTCAGAACTTTATTGGTTATGGCTGGGTTTGGCTCATCGTCACCGGCCGATCTCCTACTCTTCCTTTATGGCTTGTGAGTACCTATCTCTTACCCACACCCAATTTCTTTACTGCTGATTCTCAAATCTCTTTGTGTATTAATTTTTAATTACAAATGCTCTGATTTATTATTGGATCAACTACACTTCTTACTTTATTGATTTATCCTCTACATTGGGATTTATAAGTCTATTGATATCTCATTTTATGCCCCTTTCCGAACTACTAATTATATCAATAGTTTTAGTCAAATTTGGTTGTGGTGCTTCTGAATTTTGCAATGTGATCGATCCATTCATAATTATGTATTCAATTTGAACACACGAAGCTCTCATGTATCTGATATTTCTAGTTTGAAGAACTTCGAATATAATTAAATCACTCCAAATTAAGGTTGAAGAGCAAGGGGTCTTAATTGTGCACCTAATAATTATCAACTTGCCTTCTCTTCCTGAGTTTGTCAGCATAAAACCCCATCATCTATCATTTCCAATTAGAGTTTGTCAGCATTAAACCCGATTTTCACCATTTTCCTAGTGTGCAGGAAGGGGGGGAGAAAAATGCTTGTTAACTATTTTGAAATTGAATGCCCTTCTTGCAGTACGTCTTGTCTGACGTTATTTACTACTATTATGTTTTGACGGATCAAAATCGCTTGTTTACTGGGATGATTTGGCGTATACTTCTAATTTGTCCTAGAATTGACTCATTTCATCTATTTCTCTGCAGATGTGCTTTCTTATATTTATAGGAACAAATGGAGAAACCTACTTTAATACAGCCGCACTTGTCTCAGGTGTGCAAAATTTCCCTAAAAGCCGTGGCCCTGTGGTGGGAATACTTAAGGGATTTGCTGGGTTGGGTGGTGCAATTATGACTCAAATATATGCACTGATCCATTCCCCTGATCATGCTTCACTTATATTTATGATTGCTGTGGGACCGGCAATGGTGGCTATCGCCCTCATGTTTA</genome_strand>
        <mrna_strand>AAGTTGTTTACTCATTTATTATTTATTACGTACATACATCACGGAATCAAAATATATAGAGAGTAGTTTTTAATATTCATTACGGATGAAAAGGGACAGACAGGTCCTTTGACTTCCCCCAAGAAAGATTTAGAATCTGAATTCCCAAGGCAATTTTGATCTAACAATGGTTCGTTTGAAAGAGAGATTTAGTTTGTTCTTCAATAACAGATGGCTTGTATTCGTAGCTGCAATGTGGATTCAGAGTTTTGCTGGCATTGGGTATTTATTCGGCAGTATTTCTCCCATCATTAAGAGCTCTTTGAATTACAATCAGAGGCAAGTAGCTAGATTGGGTGTTGCTAAGGACTTGGGCGATAGTGTTGGATTTCTGGCTGGGACTTTATCCGAAATCTTGCCTTTATGGGCTGCTCTTCTTGTGGGTGCTGTTCAGAACTTTATTGGTTATGGCTGGGTTTGGCTCATCGTCACCGGCCGATCTCCTACTCTTCCTTTATGGCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGCTTTCTTATATTTATAGGAACAAATGGAGAAACCTACTTTAATACAGCCGCACTTGTCTCANGTGTGCAAAATTTCCCTAAAAGCCGTGGCCCTGTGGTGGGAATACTTAANGGANTTGCTGGGTTGGGTGGTGCAATTATGACTC-NNTATATGCACTGATCCNTTCCCCTGATCATGCTTCACTTATATTTATGATTGCTGT-GGANCGGCNNTGGTGGCTATCGCCCTCATGTTNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>30</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="1867" PGL_stop="472"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1867" e_stop="1591"/>
            <exon e_start="1523" e_stop="1383"/>
            <exon e_start="1291" e_stop="1106"/>
            <exon e_start="729" e_stop="472"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.982" e_score="0.993"/>
          <exon-intron don_prob="0.931" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.871" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="1867" e_stop="1591" e_length="277"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="1590" i_stop="1524" i_length="67"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1523" e_stop="1383" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.965">
            <gDNA_intron_boundary i_start="1382" i_stop="1292" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="1291" e_stop="1106" e_length="186"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.871">
            <gDNA_intron_boundary i_start="1105" i_stop="730" i_length="376"/>
          </intron>
          <exon e_serial="4" e_score="0.981">
            <gDNA_exon_boundary e_start="729" e_stop="472" e_length="258"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1867" stop="1591"/>
              <exon start="1523" stop="1383"/>
              <exon start="1291" stop="1106"/>
              <exon start="729" stop="472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584781" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTCGGAGTTTCCGCCCGAACATTTCTTCGGGCTGCTTCAAGCAAGTCGGTTCGGGCCTACGGTTCAGCTGTTGCAGCTCACTTTGATTACGACAATGAGGAGGATATGGAGGAACCATCAGGATCAGTTCCACGCAGAGGAGTACAGTGGCTGATCATGGGTCATCCAATGACGCAGAGACACGTGTACGCCCAATGGCTGTCCAAACTTATGGACGTTCCATATATTTCCATGGGCTCTCTCGTACCTCAACAACTCAACCCTCACTATAACAAG : ATATCAAGTGTTGTGAATGAGGGAAAGCATGTTCCAGAAGAAGTTATTTTTGGTTTGTTATCAAAGAGGCTAGAAGAAGGTCATTGCAGAGGTGAAAACGGGTTCATTTTAGATGGAATTCCTCGTACAATGCTTCAGGCT : GAAATCCTTGACAAAGTTGTGGACATAGATTTAGTTCTGAATCTCAAGTGTTCCGTGTCAAAGAATGATAGAAGCAATGGAATTTATTCAACTGAAGATCAACTCCTTAAGAGAGGTAATTTAATGTCTTCAAGGGTCATGGATGGTGGTGCCTGGAAAGAGAAGCAATATGATCATGATGAACAG : ATCAAACCCTTAGAAGAATATTATAGGAAGCAGAAAAAGCTCCTCAATTATCAAGTAGCAGGAGGGCCTGCTGAAACTTGGCAAGGCCTTTTGGCTGCATTGCAACTTCAGCACATGATGAGTGCAGTTGGTTCAACACAGTTGACTGCAGGATGCTGATACGATTCTCCTGTGTTACTTAATTCTTTTTGCAAGTATATTATGTGCAGTGATATGAGTGTATCAATATCAGTTTTGACCGGCAATGTATAGCTAGTT</gDNA_template>
            <first_frame> P  R  S  F  R  P  N  I  S  S  G  C  F  K  Q  V  G  S  G  L  R  F  S  C  C  S  S  L  *  L  R  Q  *  G  G  Y  G  G  T  I  R  I  S  S  T  Q  R  S  T  V  A  D  H  G  S  S  N  D  A  E  T  R  V  R  P  M  A  V  Q  T  Y  G  R  S  I  Y  F  H  G  L  S  R  T  S  T  T  Q  P  S  L  *  Q   : D  I  K  C  C  E  *  G  K  A  C  S  R  R  S  Y  F  W  F  V  I  K  E  A  R  R  R  S  L  Q  R  *  K  R  V  H  F  R  W  N  S  S  Y  N  A  S  G   : *  N  P  *  Q  S  C  G  H  R  F  S  S  E  S  Q  V  F  R  V  K  E  *  *  K  Q  W  N  L  F  N  *  R  S  T  P  *  E  R  *  F  N  V  F  K  G  H  G  W  W  C  L  E  R  E  A  I  *  S  *  *  T   : D  Q  T  L  R  R  I  L  *  E  A  E  K  A  P  Q  L  S  S  S  R  R  A  C  *  N  L  A  R  P  F  G  C  I  A  T  S  A  H  D  E  C  S  W  F  N  T  V  D  C  R  M  L  I  R  F  S  C  V  T  *  F  F  L  Q  V  Y  Y  V  Q  *  Y  E  C  I  N  I  S  F  D  R  Q  C  I  A  S  </first_frame>
            <second_frame>  L  G  V  S  A  R  T  F  L  R  A  A  S  S  K  S  V  R  A  Y  G  S  A  V  A  A  H  F  D  Y  D  N  E  E  D  M  E  E  P  S  G  S  V  P  R  R  G  V  Q  W  L  I  M  G  H  P  M  T  Q  R  H  V  Y  A  Q  W  L  S  K  L  M  D  V  P  Y  I  S  M  G  S  L  V  P  Q  Q  L  N  P  H  Y  N  K  :  I  S  S  V  V  N  E  G  K  H  V  P  E  E  V  I  F  G  L  L  S  K  R  L  E  E  G  H  C  R  G  E  N  G  F  I  L  D  G  I  P  R  T  M  L  Q  A  :  E  I  L  D  K  V  V  D  I  D  L  V  L  N  L  K  C  S  V  S  K  N  D  R  S  N  G  I  Y  S  T  E  D  Q  L  L  K  R  G  N  L  M  S  S  R  V  M  D  G  G  A  W  K  E  K  Q  Y  D  H  D  E  Q  :  I  K  P  L  E  E  Y  Y  R  K  Q  K  K  L  L  N  Y  Q  V  A  G  G  P  A  E  T  W  Q  G  L  L  A  A  L  Q  L  Q  H  M  M  S  A  V  G  S  T  Q  L  T  A  G  C  *  Y  D  S  P  V  L  L  N  S  F  C  K  Y  I  M  C  S  D  M  S  V  S  I  S  V  L  T  G  N  V  *  L  V </second_frame>
            <third_frame>   S  E  F  P  P  E  H  F  F  G  L  L  Q  A  S  R  F  G  P  T  V  Q  L  L  Q  L  T  L  I  T  T  M  R  R  I  W  R  N  H  Q  D  Q  F  H  A  E  E  Y  S  G  *  S  W  V  I  Q  *  R  R  D  T  C  T  P  N  G  C  P  N  L  W  T  F  H  I  F  P  W  A  L  S  Y  L  N  N  S  T  L  T  I  T  R :   Y  Q  V  L  *  M  R  E  S  M  F  Q  K  K  L  F  L  V  C  Y  Q  R  G  *  K  K  V  I  A  E  V  K  T  G  S  F  *  M  E  F  L  V  Q  C  F  R  L :   K  S  L  T  K  L  W  T  *  I  *  F  *  I  S  S  V  P  C  Q  R  M  I  E  A  M  E  F  I  Q  L  K  I  N  S  L  R  E  V  I  *  C  L  Q  G  S  W  M  V  V  P  G  K  R  S  N  M  I  M  M  N  R :   S  N  P  *  K  N  I  I  G  S  R  K  S  S  S  I  I  K  *  Q  E  G  L  L  K  L  G  K  A  F  W  L  H  C  N  F  S  T  *  *  V  Q  L  V  Q  H  S  *  L  Q  D  A  D  T  I  L  L  C  Y  L  I  L  F  A  S  I  L  C  A  V  I  *  V  Y  Q  Y  Q  F  *  P  A  M  Y  S  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1866" stop="1591"/>
                    <exon start="1523" stop="1383"/>
                    <exon start="1291" stop="1106"/>
                    <exon start="729" stop="571"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGVSARTFLRAASSKSVRAYGSAVAAHFDYDNEEDMEEPSGSVPRRGVQWLIMGHPMTQRHVYAQWLSKLMDVPYISMGSLVPQQLNPHYNKISSVVNEGKHVPEEVIFGLLSKRLEEGHCRGENGFILDGIPRTMLQAEILDKVVDIDLVLNLKCSVSKNDRSNGIYSTEDQLLKRGNLMSSRVMDGGAWKEKQYDHDEQIKPLEEYYRKQKKLLNYQVAGGPAETWQGLLAALQLQHMMSAVGSTQLTAGC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="3402" PGL_stop="4153"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3402" e_stop="4153"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="3402" e_stop="4153" e_length="752"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3402" stop="4153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAACATCATATTTCTTCATGGCGGAATACAAACAGCACCAACGCCTATTTGACCGTTTTGATGAGAACAGAGACGGGAAAATATCTGCCGAGGAGCTTCAACAGTGTGTGCATTTGATTGGCAAAGACATGTCATATGAGGAAGCAAAGGCTGCTGTTGAGCATAATGATTCAGACAATGATGGCTTGTTGGATTTTGAAGATTTTGTGAGATTAATTGAAGGTGGAAGTGAAGAAGAGAAGGCGCACGAGTTGAAGGAGGCGTTCAAGATGTATGAAATGGAAGGGTGTGGATGCATAACGCCTGAGAGTTTGAATAGAATGCTTTCTAGATTGGGAGAATCAACAACAATTGATGAATGCAGAGGAATGATTTGCCGCTATGATATTGATGGCGATGGTCTCCTTAATTTTCATGAGTTTGAGATCATGATGCGTTGCTAGTACTCGTCACTCAACTAATACTTATTACTATCTCTATCTCATAAAGTGATCACTCTTCAGTTAAGACACCTAGTTGCTACTTTGTCTCATTGTTTTGTTTCTGCTTTATTTGATTCTTTCAGTCTTTAATTGGTTGATCACTCATTCTTTCTGTATATTCTCTAAAACCAGGTTACATATGTTTATTTGTAATTTCTCCATTAGTACCCATATTTTGTGCTTTACATGTTTGTAACACTACTACTATGATTAATGATCTGTAATATATGTTTCATTTTACCTTTGGGGTGTCCTTTGATTCAACAAC</gDNA_template>
            <first_frame> Q  N  I  I  F  L  H  G  G  I  Q  T  A  P  T  P  I  *  P  F  *  *  E  Q  R  R  E  N  I  C  R  G  A  S  T  V  C  A  F  D  W  Q  R  H  V  I  *  G  S  K  G  C  C  *  A  *  *  F  R  Q  *  W  L  V  G  F  *  R  F  C  E  I  N  *  R  W  K  *  R  R  E  G  A  R  V  E  G  G  V  Q  D  V  *  N  G  R  V  W  M  H  N  A  *  E  F  E  *  N  A  F  *  I  G  R  I  N  N  N  *  *  M  Q  R  N  D  L  P  L  *  Y  *  W  R  W  S  P  *  F  S  *  V  *  D  H  D  A  L  L  V  L  V  T  Q  L  I  L  I  T  I  S  I  S  *  S  D  H  S  S  V  K  T  P  S  C  Y  F  V  S  L  F  C  F  C  F  I  *  F  F  Q  S  L  I  G  *  S  L  I  L  S  V  Y  S  L  K  P  G  Y  I  C  L  F  V  I  S  P  L  V  P  I  F  C  A  L  H  V  C  N  T  T  T  M  I  N  D  L  *  Y  M  F  H  F  T  F  G  V  S  F  D  S  T   </first_frame>
            <second_frame>  K  T  S  Y  F  F  M  A  E  Y  K  Q  H  Q  R  L  F  D  R  F  D  E  N  R  D  G  K  I  S  A  E  E  L  Q  Q  C  V  H  L  I  G  K  D  M  S  Y  E  E  A  K  A  A  V  E  H  N  D  S  D  N  D  G  L  L  D  F  E  D  F  V  R  L  I  E  G  G  S  E  E  E  K  A  H  E  L  K  E  A  F  K  M  Y  E  M  E  G  C  G  C  I  T  P  E  S  L  N  R  M  L  S  R  L  G  E  S  T  T  I  D  E  C  R  G  M  I  C  R  Y  D  I  D  G  D  G  L  L  N  F  H  E  F  E  I  M  M  R  C  *  Y  S  S  L  N  *  Y  L  L  L  S  L  S  H  K  V  I  T  L  Q  L  R  H  L  V  A  T  L  S  H  C  F  V  S  A  L  F  D  S  F  S  L  *  L  V  D  H  S  F  F  L  Y  I  L  *  N  Q  V  T  Y  V  Y  L  *  F  L  H  *  Y  P  Y  F  V  L  Y  M  F  V  T  L  L  L  *  L  M  I  C  N  I  C  F  I  L  P  L  G  C  P  L  I  Q  Q  </second_frame>
            <third_frame>   K  H  H  I  S  S  W  R  N  T  N  S  T  N  A  Y  L  T  V  L  M  R  T  E  T  G  K  Y  L  P  R  S  F  N  S  V  C  I  *  L  A  K  T  C  H  M  R  K  Q  R  L  L  L  S  I  M  I  Q  T  M  M  A  C  W  I  L  K  I  L  *  D  *  L  K  V  E  V  K  K  R  R  R  T  S  *  R  R  R  S  R  C  M  K  W  K  G  V  D  A  *  R  L  R  V  *  I  E  C  F  L  D  W  E  N  Q  Q  Q  L  M  N  A  E  E  *  F  A  A  M  I  L  M  A  M  V  S  L  I  F  M  S  L  R  S  *  C  V  A  S  T  R  H  S  T  N  T  Y  Y  Y  L  Y  L  I  K  *  S  L  F  S  *  D  T  *  L  L  L  C  L  I  V  L  F  L  L  Y  L  I  L  S  V  F  N  W  L  I  T  H  S  F  C  I  F  S  K  T  R  L  H  M  F  I  C  N  F  S  I  S  T  H  I  L  C  F  T  C  L  *  H  Y  Y  Y  D  *  *  S  V  I  Y  V  S  F  Y  L  W  G  V  L  *  F  N  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3403" stop="3846"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTSYFFMAEYKQHQRLFDRFDENRDGKISAEELQQCVHLIGKDMSYEEAKAAVEHNDSDNDGLLDFEDFVRLIEGGSEEEKAHELKEAFKMYEMEGCGCITPESLNRMLSRLGESTTIDECRGMICRYDIDGDGLLNFHEFEIMMRC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="20293" PGL_stop="23254"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20293" e_stop="20741"/>
            <exon e_start="22192" e_stop="22272"/>
            <exon e_start="22612" e_stop="23254"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.975" e_score="0.993"/>
          <exon-intron don_prob="0.958" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="20293" e_stop="20741" e_length="449"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.975">
            <gDNA_intron_boundary i_start="20742" i_stop="22191" i_length="1450"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22192" e_stop="22272" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.990">
            <gDNA_intron_boundary i_start="22273" i_stop="22611" i_length="339"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22612" e_stop="23254" e_length="643"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20293" stop="20741"/>
              <exon start="22192" stop="22272"/>
              <exon start="22612" stop="23254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571684" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCTTTTAAGATAGGACCCACCCATTTTCTCCATTACAAATTACGATAATTTTGGTATTGAAAGCCCCACAATTTTCCTATGATATTTTGCTCTCCACTCTGTTCTGTTCTGCTATCGGGCATTTCAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG : GTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAG : ATTTTACACCATCACTTGGAAATACTCCTTCGTGTGGAAATACACCTGTGCATCGAGGTTTGTTGGTCGGTAATCTGCTAGGTAATCGAGCCTCTTTTGGAGAAAGAACTTCTGCTTCTATACCGCAATCTTCTCCAATACACAAGAGGAAGAATTTACTTGAGCTTTTCAAAGAAAGCTCAAGAAACCGGAACCCGAATGAGCATGGTGCTGAAGACAACGAAAATATACAGGCAGCTGGTCTACAGCTACCACCTAAATCCACATTTAGCACACCTCATGTGCCGGTGTCTAGTGGCAAGAGCACCCCTGTAGGAAAGTACAAAAGTGAGGCAAAATCGCTGAGGTCAGTACAATGTTGTCTTCCCAGGTTGAGTGGCAGTTTTAGGGAAAAGAGGAAGAGTATGAGTCCTGCAAATACCGTGGGCTAATAGCTAGAACTCGGCTTTCATAAGTTCTCTATGTATGTATATGCTAGTGCACAAGGAATTGTGCATCTATTGAGCTTTGCACTTTGACCCTCAGTAACTTGAGGGCCGTGAGATGAGGTGTGCATTGGCACACACTTACTGTGTATAAATTAAACTTATAAAGAACAGCTTTGTTAATAAATTAACAAGGTCGTATTCTGTTAATGTATATG</gDNA_template>
            <first_frame> N  L  L  R  *  D  P  P  I  F  S  I  T  N  Y  D  N  F  G  I  E  S  P  T  I  F  L  *  Y  F  A  L  H  S  V  L  F  C  Y  R  A  F  Q  Q  F  V  P  S  L  P  K  R  S  A  P  F  Y  C  I  F  S  Y  D  F  H  L  G  S  *  R  H  L  G  G  T  N  Q  V  F  S  V  S  N  G  F  I  C  F  S  A  *  R  S  E  I  S  N  E  A  P  F  C  L  C  I  *  I  *  Q  A  C  E  S  L  T  Y  Q  R  *  T  P  *  Y  C  *  N  Q  T  L  S  S  S  N  Q  T  S  A  F  P  G  A  P  A  *  Q  F  *  R  L  W :   *  Q  G  G  G  L  F  *  F  P  G  L  V  G  V  R  L  *  *  *  L  L  *  C  Q  G  R :   F  Y  T  I  T  W  K  Y  S  F  V  W  K  Y  T  C  A  S  R  F  V  G  R  *  S  A  R  *  S  S  L  F  W  R  K  N  F  C  F  Y  T  A  I  F  S  N  T  Q  E  E  E  F  T  *  A  F  Q  R  K  L  K  K  P  E  P  E  *  A  W  C  *  R  Q  R  K  Y  T  G  S  W  S  T  A  T  T  *  I  H  I  *  H  T  S  C  A  G  V  *  W  Q  E  H  P  C  R  K  V  Q  K  *  G  K  I  A  E  V  S  T  M  L  S  S  Q  V  E  W  Q  F  *  G  K  E  E  E  Y  E  S  C  K  Y  R  G  L  I  A  R  T  R  L  S  *  V  L  Y  V  C  I  C  *  C  T  R  N  C  A  S  I  E  L  C  T  L  T  L  S  N  L  R  A  V  R  *  G  V  H  W  H  T  L  T  V  Y  K  L  N  L  *  R  T  A  L  L  I  N  *  Q  G  R  I  L  L  M  Y  M </first_frame>
            <second_frame>  T  F  *  D  R  T  H  P  F  S  P  L  Q  I  T  I  I  L  V  L  K  A  P  Q  F  S  Y  D  I  L  L  S  T  L  F  C  S  A  I  G  H  F  N  N  L  S  L  L  C  R  S  V  A  L  P  F  T  A  F  S  P  T  T  F  I  *  V  L  R  G  I  S  V  V  Q  I  K  C  F  L  L  A  M  G  S  S  A  S  V  H  K  D  P  K  S  A  M  K  L  R  F  V  F  A  S  K  S  D  K  L  V  S  P  S  P  I  K  D  K  P  L  D  T  A  E  I  K  L  S  L  P  Q  I  K  P  Q  R  S  P  V  L  P  L  N  S  F  S  D  Y   : G  S  K  E  E  A  F  F  D  S  Q  A  W  L  E  S  D  C  D  D  D  F  F  S  V  K  G   : D  F  T  P  S  L  G  N  T  P  S  C  G  N  T  P  V  H  R  G  L  L  V  G  N  L  L  G  N  R  A  S  F  G  E  R  T  S  A  S  I  P  Q  S  S  P  I  H  K  R  K  N  L  L  E  L  F  K  E  S  S  R  N  R  N  P  N  E  H  G  A  E  D  N  E  N  I  Q  A  A  G  L  Q  L  P  P  K  S  T  F  S  T  P  H  V  P  V  S  S  G  K  S  T  P  V  G  K  Y  K  S  E  A  K  S  L  R  S  V  Q  C  C  L  P  R  L  S  G  S  F  R  E  K  R  K  S  M  S  P  A  N  T  V  G  *  *  L  E  L  G  F  H  K  F  S  M  Y  V  Y  A  S  A  Q  G  I  V  H  L  L  S  F  A  L  *  P  S  V  T  *  G  P  *  D  E  V  C  I  G  T  H  L  L  C  I  N  *  T  Y  K  E  Q  L  C  *  *  I  N  K  V  V  F  C  *  C  I   </second_frame>
            <third_frame>   P  F  K  I  G  P  T  H  F  L  H  Y  K  L  R  *  F  W  Y  *  K  P  H  N  F  P  M  I  F  C  S  P  L  C  S  V  L  L  S  G  I  S  T  I  C  P  F  F  A  E  A  *  R  S  L  L  L  H  F  L  L  R  L  S  S  R  F  L  E  A  S  R  W  Y  K  S  S  V  F  C  *  Q  W  V  H  L  L  Q  C  I  K  I  R  N  Q  Q  *  S  S  V  L  S  L  H  L  N  L  T  S  L  *  V  P  H  L  S  K  I  N  P  L  I  L  L  K  S  N  S  L  F  L  K  S  N  L  S  V  P  R  C  S  R  L  T  V  L  A  T  M  :  V  A  R  R  R  P  F  L  I  P  R  P  G  W  S  Q  I  V  M  M  T  S  L  V  S  R  E  :  I  L  H  H  H  L  E  I  L  L  R  V  E  I  H  L  C  I  E  V  C  W  S  V  I  C  *  V  I  E  P  L  L  E  K  E  L  L  L  L  Y  R  N  L  L  Q  Y  T  R  G  R  I  Y  L  S  F  S  K  K  A  Q  E  T  G  T  R  M  S  M  V  L  K  T  T  K  I  Y  R  Q  L  V  Y  S  Y  H  L  N  P  H  L  A  H  L  M  C  R  C  L  V  A  R  A  P  L  *  E  S  T  K  V  R  Q  N  R  *  G  Q  Y  N  V  V  F  P  G  *  V  A  V  L  G  K  R  G  R  V  *  V  L  Q  I  P  W  A  N  S  *  N  S  A  F  I  S  S  L  C  M  Y  M  L  V  H  K  E  L  C  I  Y  *  A  L  H  F  D  P  Q  *  L  E  G  R  E  M  R  C  A  L  A  H  T  Y  C  V  *  I  K  L  I  K  N  S  F  V  N  K  L  T  R  S  Y  S  V  N  V  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20492" stop="20741"/>
                    <exon start="22192" stop="22272"/>
                    <exon start="22612" stop="23042"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLRGISVVQIKCFLLAMGSSASVHKDPKSAMKLRFVFASKSDKLVSPSPIKDKPLDTAEIKLSLPQIKPQRSPVLPLNSFSDYGSKEEAFFDSQAWLESDCDDDFFSVKGDFTPSLGNTPSCGNTPVHRGLLVGNLLGNRASFGERTSASIPQSSPIHKRKNLLELFKESSRNRNPNEHGAEDNENIQAAGLQLPPKSTFSTPHVPVSSGKSTPVGKYKSEAKSLRSVQCCLPRLSGSFREKRKSMSPANTVG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="20420" e_stop="20741"/>
            <exon e_start="21241" e_stop="21639"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20420" e_stop="20741" e_length="322"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.990">
            <gDNA_intron_boundary i_start="20742" i_stop="21240" i_length="499"/>
          </intron>
          <exon e_serial="2" e_score="0.972">
            <gDNA_exon_boundary e_start="21241" e_stop="21639" e_length="399"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20420" stop="20741"/>
              <exon start="21241" stop="21639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596549" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG : GTAAGATTGACTGACGAGCTACTGTTAAAATCATGTGCAATGCCAAAATTCTCTTATTGGTGGGGTCATTTGCAGCACATGTTGTGGCACTACGACCTTTCAAAAAAAAAGAAAGAAAGAAAGAAAGAGACACCCTGTAGCTTAATGTGAATAATTCAATAGAAGAGTCATTTTCAATATTCTTTATATTCAACCCAGATGTATTTGTCAATATAAAAATGGATGTATAATATAAGTGTAATCCATGTACATTTAGTGTAAAAAGTAAACAGTGAAATACAGGCTAAAGACACCGTTTTACAGGGAAAATGGCTTCCTTGTTTCATTTCATCATCTGTGCAAGCAGCTGTAACCTTAGTTGAGATTTGCACGTTTAATTCAGCGACTTTTCTTGTTTCA</gDNA_template>
            <first_frame> N  N  L  S  L  L  C  R  S  V  A  L  P  F  T  A  F  S  P  T  T  F  I  *  V  L  R  G  I  S  V  V  Q  I  K  C  F  L  L  A  M  G  S  S  A  S  V  H  K  D  P  K  S  A  M  K  L  R  F  V  F  A  S  K  S  D  K  L  V  S  P  S  P  I  K  D  K  P  L  D  T  A  E  I  K  L  S  L  P  Q  I  K  P  Q  R  S  P  V  L  P  L  N  S  F  S  D  Y   : G  K  I  D  *  R  A  T  V  K  I  M  C  N  A  K  I  L  L  L  V  G  S  F  A  A  H  V  V  A  L  R  P  F  K  K  K  E  R  K  K  E  R  D  T  L  *  L  N  V  N  N  S  I  E  E  S  F  S  I  F  F  I  F  N  P  D  V  F  V  N  I  K  M  D  V  *  Y  K  C  N  P  C  T  F  S  V  K  S  K  Q  *  N  T  G  *  R  H  R  F  T  G  K  M  A  S  L  F  H  F  I  I  C  A  S  S  C  N  L  S  *  D  L  H  V  *  F  S  D  F  S  C  F  </first_frame>
            <second_frame>  T  I  C  P  F  F  A  E  A  *  R  S  L  L  L  H  F  L  L  R  L  S  S  R  F  L  E  A  S  R  W  Y  K  S  S  V  F  C  *  Q  W  V  H  L  L  Q  C  I  K  I  R  N  Q  Q  *  S  S  V  L  S  L  H  L  N  L  T  S  L  *  V  P  H  L  S  K  I  N  P  L  I  L  L  K  S  N  S  L  F  L  K  S  N  L  S  V  P  R  C  S  R  L  T  V  L  A  T  M  :  V  R  L  T  D  E  L  L  L  K  S  C  A  M  P  K  F  S  Y  W  W  G  H  L  Q  H  M  L  W  H  Y  D  L  S  K  K  K  K  E  R  K  K  E  T  P  C  S  L  M  *  I  I  Q  *  K  S  H  F  Q  Y  S  L  Y  S  T  Q  M  Y  L  S  I  *  K  W  M  Y  N  I  S  V  I  H  V  H  L  V  *  K  V  N  S  E  I  Q  A  K  D  T  V  L  Q  G  K  W  L  P  C  F  I  S  S  S  V  Q  A  A  V  T  L  V  E  I  C  T  F  N  S  A  T  F  L  V  S </second_frame>
            <third_frame>   Q  F  V  P  S  L  P  K  R  S  A  P  F  Y  C  I  F  S  Y  D  F  H  L  G  S  *  R  H  L  G  G  T  N  Q  V  F  S  V  S  N  G  F  I  C  F  S  A  *  R  S  E  I  S  N  E  A  P  F  C  L  C  I  *  I  *  Q  A  C  E  S  L  T  Y  Q  R  *  T  P  *  Y  C  *  N  Q  T  L  S  S  S  N  Q  T  S  A  F  P  G  A  P  A  *  Q  F  *  R  L  W :   *  D  *  L  T  S  Y  C  *  N  H  V  Q  C  Q  N  S  L  I  G  G  V  I  C  S  T  C  C  G  T  T  T  F  Q  K  K  R  K  K  E  R  K  R  H  P  V  A  *  C  E  *  F  N  R  R  V  I  F  N  I  L  Y  I  Q  P  R  C  I  C  Q  Y  K  N  G  C  I  I  *  V  *  S  M  Y  I  *  C  K  K  *  T  V  K  Y  R  L  K  T  P  F  Y  R  E  N  G  F  L  V  S  F  H  H  L  C  K  Q  L  *  P  *  L  R  F  A  R  L  I  Q  R  L  F  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20492" stop="20741"/>
                    <exon start="21241" stop="21254"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLRGISVVQIKCFLLAMGSSASVHKDPKSAMKLRFVFASKSDKLVSPSPIKDKPLDTAEIKLSLPQIKPQRSPVLPLNSFSDYGKID*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20628" stop="20741"/>
                    <exon start="21241" stop="21390"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPHLSKINPLILLKSNSLFLKSNLSVPRCSRLTVLATMVRLTDELLLKSCAMPKFSYWWGHLQHMLWHYDLSKKKKERKKETPCSLM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="20419" e_stop="20741"/>
            <exon e_start="22192" e_stop="22272"/>
            <exon e_start="22592" e_stop="22779"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20419" e_stop="20741" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.975">
            <gDNA_intron_boundary i_start="20742" i_stop="22191" i_length="1450"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22192" e_stop="22272" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.958" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22273" i_stop="22591" i_length="319"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="22592" e_stop="22779" e_length="188"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20419" stop="20741"/>
              <exon start="22192" stop="22272"/>
              <exon start="22592" stop="22779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596550" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG : GTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAG : TCTATCTGTCTTCAATGCAGATTTTACACCATCACTTGGAAATACTCCTTCGTGTGGAAATACACCTGTGCATCGAGGTTTGTTGGTCGGTAATCTGCTAGGTAATCGAGCCTCTTTTGGAGAAAGAACTTCTGCTTCTATACCGCAATCTTCTCCAATACACAAGAGGAAGAATTTACTTGAGCTTT</gDNA_template>
            <first_frame> Q  Q  F  V  P  S  L  P  K  R  S  A  P  F  Y  C  I  F  S  Y  D  F  H  L  G  S  *  R  H  L  G  G  T  N  Q  V  F  S  V  S  N  G  F  I  C  F  S  A  *  R  S  E  I  S  N  E  A  P  F  C  L  C  I  *  I  *  Q  A  C  E  S  L  T  Y  Q  R  *  T  P  *  Y  C  *  N  Q  T  L  S  S  S  N  Q  T  S  A  F  P  G  A  P  A  *  Q  F  *  R  L  W :   *  Q  G  G  G  L  F  *  F  P  G  L  V  G  V  R  L  *  *  *  L  L  *  C  Q  G  S :   L  S  V  F  N  A  D  F  T  P  S  L  G  N  T  P  S  C  G  N  T  P  V  H  R  G  L  L  V  G  N  L  L  G  N  R  A  S  F  G  E  R  T  S  A  S  I  P  Q  S  S  P  I  H  K  R  K  N  L  L  E  L  </first_frame>
            <second_frame>  N  N  L  S  L  L  C  R  S  V  A  L  P  F  T  A  F  S  P  T  T  F  I  *  V  L  R  G  I  S  V  V  Q  I  K  C  F  L  L  A  M  G  S  S  A  S  V  H  K  D  P  K  S  A  M  K  L  R  F  V  F  A  S  K  S  D  K  L  V  S  P  S  P  I  K  D  K  P  L  D  T  A  E  I  K  L  S  L  P  Q  I  K  P  Q  R  S  P  V  L  P  L  N  S  F  S  D  Y   : G  S  K  E  E  A  F  F  D  S  Q  A  W  L  E  S  D  C  D  D  D  F  F  S  V  K  G   : V  Y  L  S  S  M  Q  I  L  H  H  H  L  E  I  L  L  R  V  E  I  H  L  C  I  E  V  C  W  S  V  I  C  *  V  I  E  P  L  L  E  K  E  L  L  L  L  Y  R  N  L  L  Q  Y  T  R  G  R  I  Y  L  S  F </second_frame>
            <third_frame>   T  I  C  P  F  F  A  E  A  *  R  S  L  L  L  H  F  L  L  R  L  S  S  R  F  L  E  A  S  R  W  Y  K  S  S  V  F  C  *  Q  W  V  H  L  L  Q  C  I  K  I  R  N  Q  Q  *  S  S  V  L  S  L  H  L  N  L  T  S  L  *  V  P  H  L  S  K  I  N  P  L  I  L  L  K  S  N  S  L  F  L  K  S  N  L  S  V  P  R  C  S  R  L  T  V  L  A  T  M  :  V  A  R  R  R  P  F  L  I  P  R  P  G  W  S  Q  I  V  M  M  T  S  L  V  S  R  E  :  S  I  C  L  Q  C  R  F  Y  T  I  T  W  K  Y  S  F  V  W  K  Y  T  C  A  S  R  F  V  G  R  *  S  A  R  *  S  S  L  F  W  R  K  N  F  C  F  Y  T  A  I  F  S  N  T  Q  E  E  E  F  T  *  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20492" stop="20741"/>
                    <exon start="22192" stop="22272"/>
                    <exon start="22592" stop="22692"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLRGISVVQIKCFLLAMGSSASVHKDPKSAMKLRFVFASKSDKLVSPSPIKDKPLDTAEIKLSLPQIKPQRSPVLPLNSFSDYGSKEEAFFDSQAWLESDCDDDFFSVKGVYLSSMQILHHHLEILLRVEIHLCIEVCWSVIC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="20362" e_stop="20741"/>
            <exon e_start="22192" e_stop="22564"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.975" e_score="0.995"/>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="20362" e_stop="20741" e_length="380"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.975">
            <gDNA_intron_boundary i_start="20742" i_stop="22191" i_length="1450"/>
          </intron>
          <exon e_serial="2" e_score="0.949">
            <gDNA_exon_boundary e_start="22192" e_stop="22564" e_length="373"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20362" stop="20741"/>
              <exon start="22192" stop="22564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596552" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAATTTTCCTATGATATTTTGCTCTCCACTCTGTTCTGTTCTGCTATCGGGCATTTCAACAATTTGTCCCTTCTTTGCCGAAGCGTAGCGCTCCCTTTTACTGCATTTTCTCCTACGACTTTCATCTAGGTTCTTAGAGGCATCTCGGTGGTACAAATCAAGTGTTTTCTGTTAGCAATGGGTTCATCTGCTTCAGTGCATAAAGATCCGAAATCAGCAATGAAGCTCCGTTTTGTCTTTGCATCTAAATCTGACAAGCTTGTGAGTCCCTCACCTATCAAAGATAAACCCCTTGATACTGCTGAAATCAAACTCTCTCTTCCTCAAATCAAACCTCAGCGTTCCCCGGTGCTCCCGCTTAACAGTTTTAGCGACTATG : GTAGCAAGGAGGAGGCCTTTTTTGATTCCCAGGCCTGGTTGGAGTCAGATTGTGATGATGACTTCTTTAGTGTCAAGGGAGGTGAGACAGAACTTTGATACCTGATGCTCTTTCCATATTCTCCGTTCATCTTTCTTCTCATGTTATTATAGTCATAAAATTGAAAATGGCTATTATGCATTCAACTGAATCATTAGTAATGACTGCTAAGGCAATTTGAGAAGACCAGATCTAGAAAATCAGGTATTGGAAGTACCTGACCTTTTTGTTCAAGAAAAGTGCCACACCAGTGCGTAGTTTTTGCTAAAATAGGGATCTAAGTGTCAGGAACACTTTTTATTCTTGTTGTGAGTAGCCACCTTCAATTTACACT</gDNA_template>
            <first_frame> T  I  F  L  *  Y  F  A  L  H  S  V  L  F  C  Y  R  A  F  Q  Q  F  V  P  S  L  P  K  R  S  A  P  F  Y  C  I  F  S  Y  D  F  H  L  G  S  *  R  H  L  G  G  T  N  Q  V  F  S  V  S  N  G  F  I  C  F  S  A  *  R  S  E  I  S  N  E  A  P  F  C  L  C  I  *  I  *  Q  A  C  E  S  L  T  Y  Q  R  *  T  P  *  Y  C  *  N  Q  T  L  S  S  S  N  Q  T  S  A  F  P  G  A  P  A  *  Q  F  *  R  L  W :   *  Q  G  G  G  L  F  *  F  P  G  L  V  G  V  R  L  *  *  *  L  L  *  C  Q  G  R  *  D  R  T  L  I  P  D  A  L  S  I  F  S  V  H  L  S  S  H  V  I  I  V  I  K  L  K  M  A  I  M  H  S  T  E  S  L  V  M  T  A  K  A  I  *  E  D  Q  I  *  K  I  R  Y  W  K  Y  L  T  F  L  F  K  K  S  A  T  P  V  R  S  F  C  *  N  R  D  L  S  V  R  N  T  F  Y  S  C  C  E  *  P  P  S  I  Y  T </first_frame>
            <second_frame>  Q  F  S  Y  D  I  L  L  S  T  L  F  C  S  A  I  G  H  F  N  N  L  S  L  L  C  R  S  V  A  L  P  F  T  A  F  S  P  T  T  F  I  *  V  L  R  G  I  S  V  V  Q  I  K  C  F  L  L  A  M  G  S  S  A  S  V  H  K  D  P  K  S  A  M  K  L  R  F  V  F  A  S  K  S  D  K  L  V  S  P  S  P  I  K  D  K  P  L  D  T  A  E  I  K  L  S  L  P  Q  I  K  P  Q  R  S  P  V  L  P  L  N  S  F  S  D  Y   : G  S  K  E  E  A  F  F  D  S  Q  A  W  L  E  S  D  C  D  D  D  F  F  S  V  K  G  G  E  T  E  L  *  Y  L  M  L  F  P  Y  S  P  F  I  F  L  L  M  L  L  *  S  *  N  *  K  W  L  L  C  I  Q  L  N  H  *  *  *  L  L  R  Q  F  E  K  T  R  S  R  K  S  G  I  G  S  T  *  P  F  C  S  R  K  V  P  H  Q  C  V  V  F  A  K  I  G  I  *  V  S  G  T  L  F  I  L  V  V  S  S  H  L  Q  F  T   </second_frame>
            <third_frame>   N  F  P  M  I  F  C  S  P  L  C  S  V  L  L  S  G  I  S  T  I  C  P  F  F  A  E  A  *  R  S  L  L  L  H  F  L  L  R  L  S  S  R  F  L  E  A  S  R  W  Y  K  S  S  V  F  C  *  Q  W  V  H  L  L  Q  C  I  K  I  R  N  Q  Q  *  S  S  V  L  S  L  H  L  N  L  T  S  L  *  V  P  H  L  S  K  I  N  P  L  I  L  L  K  S  N  S  L  F  L  K  S  N  L  S  V  P  R  C  S  R  L  T  V  L  A  T  M  :  V  A  R  R  R  P  F  L  I  P  R  P  G  W  S  Q  I  V  M  M  T  S  L  V  S  R  E  V  R  Q  N  F  D  T  *  C  S  F  H  I  L  R  S  S  F  F  S  C  Y  Y  S  H  K  I  E  N  G  Y  Y  A  F  N  *  I  I  S  N  D  C  *  G  N  L  R  R  P  D  L  E  N  Q  V  L  E  V  P  D  L  F  V  Q  E  K  C  H  T  S  A  *  F  L  L  K  *  G  S  K  C  Q  E  H  F  L  F  L  L  *  V  A  T  F  N  L  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20492" stop="20741"/>
                    <exon start="22192" stop="22289"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLRGISVVQIKCFLLAMGSSASVHKDPKSAMKLRFVFASKSDKLVSPSPIKDKPLDTAEIKLSLPQIKPQRSPVLPLNSFSDYGSKEEAFFDSQAWLESDCDDDFFSVKGGETEL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="28631" PGL_stop="29528"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28631" e_stop="28894"/>
            <exon e_start="29122" e_stop="29528"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.993" e_score="0.985"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="28631" e_stop="28894" e_length="264"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.993">
            <gDNA_intron_boundary i_start="28895" i_stop="29121" i_length="227"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="29122" e_stop="29528" e_length="407"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28631" stop="28894"/>
              <exon start="29122" stop="29528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573041" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCTAAGCATTGAAGGTCAGGTTTATCTTAAAAAAGAACTAGCTAGTACGTATCTACTAATATTTGTTAGGCAAAATTATCAGTTTGTTACCAAAATGGTGCTAGTACGCAAATCTTTGTTGATATCTGTCATTGTGATGGTAATGATCCAGAAAAATGCAATGGCCGCTCAACACGTTGTTGGTGGAAGCCAAGGATGGGATGAATCTGCTGATTTCAAATCCTGGGCTTCTGGTCAGACATTCAAAGTTGGTGATACACTAG : TATTTAGGTACAATCCAGGCCTTCACAGTGTTGTAGAACTTGAGGGTGATAGCTCATACAAGAGTTGTGATATAAGCAGTACAGTGAACTCGATGAGTGCGGGTAATGATGTGGTTAAACTAAACAAGCCAGGGACTAGATACTTTGCTTGTGGAACAGCAGGTCATTGTGACCAGGGAATGAAGCTTAAGATTAAAACTGTTACTGGAAGTGCACCTTCTAATCAGGAAGATTCTTCCACGCCTCGCTCTTCTTCTGCAGCTTCTCATTGTTTTTCTACCGCATTTTTCACTTTCATTGTTGCAATTTTGACTGTACAAATGGCTCTAGTGTTCCTCTTATAAGACACATTTTTGCTTTATTGATTCAATGTTTTGCACTTGATGAGGCAGAGTAGCTGGTATTTA</gDNA_template>
            <first_frame> S  *  A  L  K  V  R  F  I  L  K  K  N  *  L  V  R  I  Y  *  Y  L  L  G  K  I  I  S  L  L  P  K  W  C  *  Y  A  N  L  C  *  Y  L  S  L  *  W  *  *  S  R  K  M  Q  W  P  L  N  T  L  L  V  E  A  K  D  G  M  N  L  L  I  S  N  P  G  L  L  V  R  H  S  K  L  V  I  H  *  :  Y  L  G  T  I  Q  A  F  T  V  L  *  N  L  R  V  I  A  H  T  R  V  V  I  *  A  V  Q  *  T  R  *  V  R  V  M  M  W  L  N  *  T  S  Q  G  L  D  T  L  L  V  E  Q  Q  V  I  V  T  R  E  *  S  L  R  L  K  L  L  L  E  V  H  L  L  I  R  K  I  L  P  R  L  A  L  L  L  Q  L  L  I  V  F  L  P  H  F  S  L  S  L  L  Q  F  *  L  Y  K  W  L  *  C  S  S  Y  K  T  H  F  C  F  I  D  S  M  F  C  T  *  *  G  R  V  A  G  I   </first_frame>
            <second_frame>  P  K  H  *  R  S  G  L  S  *  K  R  T  S  *  Y  V  S  T  N  I  C  *  A  K  L  S  V  C  Y  Q  N  G  A  S  T  Q  I  F  V  D  I  C  H  C  D  G  N  D  P  E  K  C  N  G  R  S  T  R  C  W  W  K  P  R  M  G  *  I  C  *  F  Q  I  L  G  F  W  S  D  I  Q  S  W  *  Y  T  S :   I  *  V  Q  S  R  P  S  Q  C  C  R  T  *  G  *  *  L  I  Q  E  L  *  Y  K  Q  Y  S  E  L  D  E  C  G  *  *  C  G  *  T  K  Q  A  R  D  *  I  L  C  L  W  N  S  R  S  L  *  P  G  N  E  A  *  D  *  N  C  Y  W  K  C  T  F  *  S  G  R  F  F  H  A  S  L  F  F  C  S  F  S  L  F  F  Y  R  I  F  H  F  H  C  C  N  F  D  C  T  N  G  S  S  V  P  L  I  R  H  I  F  A  L  L  I  Q  C  F  A  L  D  E  A  E  *  L  V  F  </second_frame>
            <third_frame>   L  S  I  E  G  Q  V  Y  L  K  K  E  L  A  S  T  Y  L  L  I  F  V  R  Q  N  Y  Q  F  V  T  K  M  V  L  V  R  K  S  L  L  I  S  V  I  V  M  V  M  I  Q  K  N  A  M  A  A  Q  H  V  V  G  G  S  Q  G  W  D  E  S  A  D  F  K  S  W  A  S  G  Q  T  F  K  V  G  D  T  L   : V  F  R  Y  N  P  G  L  H  S  V  V  E  L  E  G  D  S  S  Y  K  S  C  D  I  S  S  T  V  N  S  M  S  A  G  N  D  V  V  K  L  N  K  P  G  T  R  Y  F  A  C  G  T  A  G  H  C  D  Q  G  M  K  L  K  I  K  T  V  T  G  S  A  P  S  N  Q  E  D  S  S  T  P  R  S  S  S  A  A  S  H  C  F  S  T  A  F  F  T  F  I  V  A  I  L  T  V  Q  M  A  L  V  F  L  L  *  D  T  F  L  L  Y  *  F  N  V  L  H  L  M  R  Q  S  S  W  Y  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28633" stop="28894"/>
                    <exon start="29122" stop="29465"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSIEGQVYLKKELASTYLLIFVRQNYQFVTKMVLVRKSLLISVIVMVMIQKNAMAAQHVVGGSQGWDESADFKSWASGQTFKVGDTLVFRYNPGLHSVVELEGDSSYKSCDISSTVNSMSAGNDVVKLNKPGTRYFACGTAGHCDQGMKLKIKTVTGSAPSNQEDSSTPRSSSAASHCFSTAFFTFIVAILTVQMALVFLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="30846" PGL_stop="30332"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30846" e_stop="30332"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="30846" e_stop="30332" e_length="515"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30846" stop="30332"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598877" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGCCATCTGGTCTCTATATCCCAATCATCCTCATGGGTTCAGGTTATGGTCGCTTGCTTGGCATTGCCATGAGACCTTATACAAAAATTGATCAGGAGTTGTTTGCTGTTCTTGGAGCAGCTTCCCTTATGGCTGGTTCAATGAGAATGACAGTTACTGTTTGTGTCATATTTCTTGAGCTGACAAACAATCTACTTCTTCTGCCGATAACAATGCTTGTCCTTCTAATTGCTAAAATTGTTGCAGACTGCTTCAACCCAAGTATCTATGAAATGGTTTTGGAACTAAAAGGTCTACCTTTCTTGGAAGCACATCCAGAGGCATGGATGAGGAATATCATAGTTGGTGAGCTTTCTGATGTAAAGTCACCAGTAGTTACTCTTGAGGGAATTGAGAAAGTGAGACGAATCGTAGAGGTTCTAAAGTACACCACTCACAATGGATTCCCTGTTGTAGATGGTGTGATACCCGAGTTACATGGACTTGTCTTAAGAACTCACCTTCTTTTGGTGCT</gDNA_template>
            <first_frame> V  P  S  G  L  Y  I  P  I  I  L  M  G  S  G  Y  G  R  L  L  G  I  A  M  R  P  Y  T  K  I  D  Q  E  L  F  A  V  L  G  A  A  S  L  M  A  G  S  M  R  M  T  V  T  V  C  V  I  F  L  E  L  T  N  N  L  L  L  L  P  I  T  M  L  V  L  L  I  A  K  I  V  A  D  C  F  N  P  S  I  Y  E  M  V  L  E  L  K  G  L  P  F  L  E  A  H  P  E  A  W  M  R  N  I  I  V  G  E  L  S  D  V  K  S  P  V  V  T  L  E  G  I  E  K  V  R  R  I  V  E  V  L  K  Y  T  T  H  N  G  F  P  V  V  D  G  V  I  P  E  L  H  G  L  V  L  R  T  H  L  L  L  V   </first_frame>
            <second_frame>  C  H  L  V  S  I  S  Q  S  S  S  W  V  Q  V  M  V  A  C  L  A  L  P  *  D  L  I  Q  K  L  I  R  S  C  L  L  F  L  E  Q  L  P  L  W  L  V  Q  *  E  *  Q  L  L  F  V  S  Y  F  L  S  *  Q  T  I  Y  F  F  C  R  *  Q  C  L  S  F  *  L  L  K  L  L  Q  T  A  S  T  Q  V  S  M  K  W  F  W  N  *  K  V  Y  L  S  W  K  H  I  Q  R  H  G  *  G  I  S  *  L  V  S  F  L  M  *  S  H  Q  *  L  L  L  R  E  L  R  K  *  D  E  S  *  R  F  *  S  T  P  L  T  M  D  S  L  L  *  M  V  *  Y  P  S  Y  M  D  L  S  *  E  L  T  F  F  W  C  </second_frame>
            <third_frame>   A  I  W  S  L  Y  P  N  H  P  H  G  F  R  L  W  S  L  A  W  H  C  H  E  T  L  Y  K  N  *  S  G  V  V  C  C  S  W  S  S  F  P  Y  G  W  F  N  E  N  D  S  Y  C  L  C  H  I  S  *  A  D  K  Q  S  T  S  S  A  D  N  N  A  C  P  S  N  C  *  N  C  C  R  L  L  Q  P  K  Y  L  *  N  G  F  G  T  K  R  S  T  F  L  G  S  T  S  R  G  M  D  E  E  Y  H  S  W  *  A  F  *  C  K  V  T  S  S  Y  S  *  G  N  *  E  S  E  T  N  R  R  G  S  K  V  H  H  S  Q  W  I  P  C  C  R  W  C  D  T  R  V  T  W  T  C  L  K  N  S  P  S  F  G  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30846" stop="30334"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPSGLYIPIILMGSGYGRLLGIAMRPYTKIDQELFAVLGAASLMAGSMRMTVTVCVIFLELTNNLLLLPITMLVLLIAKIVADCFNPSIYEMVLELKGLPFLEAHPEAWMRNIIVGELSDVKSPVVTLEGIEKVRRIVEVLKYTTHNGFPVVDGVIPELHGLVLRTHLLLV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="41838" PGL_stop="42577"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41838" e_stop="42577"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="41838" e_stop="42577" e_length="740"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41838" stop="42513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42005" stop="42577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589393" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCCCCTCATAATTTCCCCAAAACGTAACCATGTGTGAATAGATTTTGAGTAAGCAGGGTTGCAGCCACGAGTGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</gDNA_template>
            <first_frame> I  P  S  *  F  P  Q  N  V  T  M  C  E  *  I  L  S  K  Q  G  C  S  H  E  *  V  F  P  C  Y  C  V  A  R  M  P  Q  N  F  H  A  *  A  N  C  *  E  Y  V  S  I  S  D  C  V  S  L  E  V  L  V  P  T  L  F  L  S  M  N  A  R  K  P  T  C  *  L  K  H  Q  G  D  *  Q  H  D  I  K  T  L  *  A  A  R  S  A  M  A  *  A  *  S  V  G  R  T  F  Q  V  S  E  G  F  F  N  L  H  S  L  R  I  D  I  N  K  L  F  G  C  S  N  F  N  R  *  V  S  C  *  N  P  W  L  L  C  R  R  *  V  D  F  R  *  R  V  V  T  M  S  P  C  R  A  L  I  F  S  A  F  R  A  R  F  I  Q  *  N  L  A  *  D  W  I  A  F  S  Q  P  L  I  A  *  S  L  *  V  T  R  *  H  I  M  *  V  A  D  R  F  P  V  F  R  S  *  V  C  I  L  Y  F  S  S  Y  S  T  *  P  V  P  T  Q  L  L  N  G  F  I  P  W  H  F  K  A  S  I  T   </first_frame>
            <second_frame>  S  P  H  N  F  P  K  T  *  P  C  V  N  R  F  *  V  S  R  V  A  A  T  S  E  S  S  L  V  I  V  *  P  E  C  R  K  T  S  M  P  K  R  T  V  E  S  T  F  R  F  L  T  V  L  A  W  K  C  L  S  Q  P  C  F  *  A  *  T  P  A  S  Q  H  V  S  *  S  I  R  A  I  S  S  M  I  S  K  R  S  E  L  L  V  R  L  W  R  R  P  S  P  *  A  G  L  F  K  S  R  K  V  S  S  I  C  I  R  F  E  *  I  L  T  S  C  L  G  V  R  I  S  T  G  K  L  V  A  R  I  H  G  S  F  A  D  A  E  *  I  L  G  D  G  W  *  Q  *  V  R  V  E  R  *  F  F  R  P  L  E  R  D  L  Y  N  R  I  W  H  E  I  G  L  L  L  V  S  L  L  *  P  K  V  F  E  *  L  D  D  I  S  C  K  L  L  I  G  F  Q  F  S  A  P  R  S  A  Y  C  T  F  P  L  T  R  L  N  Q  Y  Q  P  S  F  S  T  D  L  Y  H  G  T  L  K  P  A  S  L  </second_frame>
            <third_frame>   P  L  I  I  S  P  K  R  N  H  V  *  I  D  F  E  *  A  G  L  Q  P  R  V  S  L  P  L  L  L  C  S  Q  N  A  A  K  L  P  C  L  S  E  L  L  R  V  R  F  D  F  *  L  C  *  P  G  S  A  C  P  N  L  V  S  E  H  E  R  P  Q  A  N  M  L  V  E  A  S  G  R  L  A  A  *  Y  Q  N  A  L  S  C  S  F  G  Y  G  V  G  L  V  R  R  Q  D  F  S  S  L  G  R  F  L  Q  S  A  F  A  S  N  R  Y  *  Q  V  V  W  V  F  E  F  Q  Q  V  S  *  L  L  E  S  M  A  P  L  P  T  L  S  R  F  *  V  T  G  G  D  N  E  S  V  S  S  A  D  F  F  G  L  *  S  E  I  Y  T  I  E  F  G  M  R  L  D  C  F  *  S  A  S  Y  S  L  K  S  L  S  D  *  M  T  Y  H  V  S  C  *  *  V  S  S  F  P  L  L  G  L  H  I  V  L  F  L  L  L  D  L  T  S  T  N  P  A  S  Q  R  I  Y  T  M  A  L  *  S  Q  H  H  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="43159" PGL_stop="42539"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43159" e_stop="42539"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="43159" e_stop="42539" e_length="621"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43159" stop="42937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43130" stop="42768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43068" stop="42539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAGTGCCATGGTATAAATCCG</gDNA_template>
            <first_frame> L  M  N  P  L  M  I  F  I  K  I  I  K  L  R  *  I  H  I  L  S  Y  D  Q  M  V  S  P  K  I  N  N  Q  T  T  K  C  A  N  S  I  F  Y  T  T  L  F  T  N  S  A  P  N  Y  T  *  N  D  S  T  A  *  R  W  L  A  T  P  Y  L  T  V  K  L  S  L  L  P  N  L  A  V  T  C  Q  P  K  R  E  Q  N  I  T  S  N  E  S  T  D  C  *  V  I  V  T  S  T  K  S  D  S  L  Y  T  V  G  M  L  A  L  S  V  R  A  I  R  C  P  L  Y  L  L  T  G  L  I  S  V  S  K  N  G  L  W  Y  C  E  L  Q  S  H  Y  T  V  V  L  L  L  F  M  R  K  R  S  R  F  Q  S  N  V  Q  R  K  L  M  T  N  F  *  P  T  L  R  A  F  Y  R  V  T  P  H  R  S  L  S  V  M  L  A  L  K  C  H  G  I  N  P </first_frame>
            <second_frame>  *  *  I  P  *  *  F  L  S  K  S  L  S  *  G  R  Y  T  S  C  H  M  I  K  W  F  R  Q  K  S  I  I  R  Q  Q  N  V  R  T  R  Y  F  T  R  L  S  L  P  I  L  P  R  I  T  L  K  T  T  Q  Q  L  N  V  G  L  P  R  L  T  *  L  *  N  S  H  S  Y  R  T  W  P  *  P  A  N  Q  S  E  N  K  T  *  H  Q  T  N  R  P  I  V  R  *  S  S  P  P  Q  R  A  T  R  C  I  P  L  A  C  *  L  Y  L  F  G  Q  Y  D  A  H  C  T  C  *  L  V  *  Y  P  *  A  K  T  A  Y  G  I  A  S  F  S  R  T  T  R  S  F  C  Y  S  L  *  E  S  V  P  A  F  R  A  M  F  K  E  S  S  *  P  I  S  S  R  P  C  E  H  S  T  E  *  H  H  T  A  H  C  Q  *  C  W  L  *  S  A  M  V  *  I   </second_frame>
            <third_frame>   D  E  S  P  N  D  F  Y  Q  N  H  *  V  K  V  D  T  H  L  V  I  *  S  N  G  F  A  K  N  Q  *  S  D  N  K  M  C  E  L  D  I  L  H  D  S  L  Y  Q  F  C  P  E  L  H  L  K  R  L  N  S  L  T  L  A  C  H  A  L  L  D  C  K  T  L  T  L  T  E  L  G  R  N  L  P  T  K  A  R  T  K  H  N  I  K  R  I  D  R  L  L  G  N  R  H  L  H  K  E  R  L  A  V  Y  R  W  H  A  S  F  I  C  S  G  N  T  M  P  I  V  L  V  D  W  S  D  I  R  E  Q  K  R  L  M  V  L  R  A  S  V  A  L  H  G  R  S  V  T  L  Y  E  K  A  F  P  L  S  E  Q  C  S  K  K  A  H  D  Q  F  L  A  D  L  A  S  I  L  P  S  N  T  T  P  L  I  V  S  D  A  G  F  K  V  P  W  Y  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43064" stop="42540"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDNKMCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="71401" PGL_stop="54352"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71401" e_stop="71327"/>
            <exon e_start="68445" e_stop="68213"/>
            <exon e_start="68098" e_stop="68037"/>
            <exon e_start="67926" e_stop="67869"/>
            <exon e_start="67702" e_stop="67607"/>
            <exon e_start="66333" e_stop="66232"/>
            <exon e_start="65913" e_stop="65830"/>
            <exon e_start="64688" e_stop="64608"/>
            <exon e_start="63860" e_stop="63717"/>
            <exon e_start="62418" e_stop="62327"/>
            <exon e_start="61041" e_stop="60960"/>
            <exon e_start="60215" e_stop="60033"/>
            <exon e_start="58903" e_stop="58788"/>
            <exon e_start="58647" e_stop="58589"/>
            <exon e_start="58176" e_stop="58076"/>
            <exon e_start="57044" e_stop="56994"/>
            <exon e_start="56301" e_stop="56122"/>
            <exon e_start="56038" e_stop="55904"/>
            <exon e_start="55469" e_stop="55395"/>
            <exon e_start="54993" e_stop="54936"/>
            <exon e_start="54863" e_stop="54352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.000" e_score="0.820"/>
          <exon-intron don_prob="0.993" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.940" acc_prob="0.561" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.828" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.865" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.395" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.920" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.760" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71401" e_stop="71327" e_length="75"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="71326" i_stop="68446" i_length="2881"/>
          </intron>
          <exon e_serial="2" e_score="0.820">
            <gDNA_exon_boundary e_start="68445" e_stop="68213" e_length="233"/>
          </exon>
          <intron i_serial="2" don_prob="0.918" acc_prob="0.000">
            <gDNA_intron_boundary i_start="68212" i_stop="68099" i_length="114"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68098" e_stop="68037" e_length="62"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.950">
            <gDNA_intron_boundary i_start="68036" i_stop="67927" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67926" e_stop="67869" e_length="58"/>
          </exon>
          <intron i_serial="4" don_prob="0.940" acc_prob="0.561">
            <gDNA_intron_boundary i_start="67868" i_stop="67703" i_length="166"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="67702" e_stop="67607" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.982">
            <gDNA_intron_boundary i_start="67606" i_stop="66334" i_length="1273"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66333" e_stop="66232" e_length="102"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.997">
            <gDNA_intron_boundary i_start="66231" i_stop="65914" i_length="318"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="65913" e_stop="65830" e_length="84"/>
          </exon>
          <intron i_serial="7" don_prob="0.894" acc_prob="1.000">
            <gDNA_intron_boundary i_start="65829" i_stop="64689" i_length="1141"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="64688" e_stop="64608" e_length="81"/>
          </exon>
          <intron i_serial="8" don_prob="0.985" acc_prob="0.956">
            <gDNA_intron_boundary i_start="64607" i_stop="63861" i_length="747"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="63860" e_stop="63717" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="63716" i_stop="62419" i_length="1298"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="62418" e_stop="62327" e_length="92"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="62326" i_stop="61042" i_length="1285"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="61041" e_stop="60960" e_length="82"/>
          </exon>
          <intron i_serial="11" don_prob="0.998" acc_prob="0.828">
            <gDNA_intron_boundary i_start="60959" i_stop="60216" i_length="744"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="60215" e_stop="60033" e_length="183"/>
          </exon>
          <intron i_serial="12" don_prob="0.997" acc_prob="0.981">
            <gDNA_intron_boundary i_start="60032" i_stop="58904" i_length="1129"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="58903" e_stop="58788" e_length="116"/>
          </exon>
          <intron i_serial="13" don_prob="0.958" acc_prob="0.993">
            <gDNA_intron_boundary i_start="58787" i_stop="58648" i_length="140"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="58647" e_stop="58589" e_length="59"/>
          </exon>
          <intron i_serial="14" don_prob="0.000" acc_prob="0.865">
            <gDNA_intron_boundary i_start="58588" i_stop="58177" i_length="412"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="58176" e_stop="58076" e_length="101"/>
          </exon>
          <intron i_serial="15" don_prob="0.997" acc_prob="0.972">
            <gDNA_intron_boundary i_start="58075" i_stop="57045" i_length="1031"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="57044" e_stop="56994" e_length="51"/>
          </exon>
          <intron i_serial="16" don_prob="0.996" acc_prob="0.997">
            <gDNA_intron_boundary i_start="56993" i_stop="56302" i_length="692"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="56301" e_stop="56122" e_length="180"/>
          </exon>
          <intron i_serial="17" don_prob="0.395" acc_prob="0.991">
            <gDNA_intron_boundary i_start="56121" i_stop="56039" i_length="83"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="56038" e_stop="55904" e_length="135"/>
          </exon>
          <intron i_serial="18" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="55903" i_stop="55470" i_length="434"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="55469" e_stop="55395" e_length="75"/>
          </exon>
          <intron i_serial="19" don_prob="0.920" acc_prob="0.996">
            <gDNA_intron_boundary i_start="55394" i_stop="54994" i_length="401"/>
          </intron>
          <exon e_serial="20" e_score="1.000">
            <gDNA_exon_boundary e_start="54993" e_stop="54936" e_length="58"/>
          </exon>
          <intron i_serial="20" don_prob="0.760" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54935" i_stop="54864" i_length="72"/>
          </intron>
          <exon e_serial="21" e_score="0.939">
            <gDNA_exon_boundary e_start="54863" e_stop="54352" e_length="512"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71401" stop="71327"/>
              <exon start="68445" stop="68213"/>
              <exon start="68098" stop="68037"/>
              <exon start="67926" stop="67869"/>
              <exon start="67702" stop="67607"/>
              <exon start="66333" stop="66232"/>
              <exon start="65913" stop="65830"/>
              <exon start="64688" stop="64608"/>
              <exon start="63860" stop="63717"/>
              <exon start="62418" stop="62327"/>
              <exon start="61041" stop="60960"/>
              <exon start="60215" stop="60033"/>
              <exon start="58903" stop="58788"/>
              <exon start="58647" stop="58589"/>
              <exon start="58176" stop="58076"/>
              <exon start="57044" stop="56994"/>
              <exon start="56301" stop="56122"/>
              <exon start="56038" stop="55904"/>
              <exon start="55469" stop="55395"/>
              <exon start="54993" stop="54936"/>
              <exon start="54863" stop="54352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569294" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58113" stop="58076"/>
              <exon start="57044" stop="56994"/>
              <exon start="56301" stop="56122"/>
              <exon start="56038" stop="56018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588169" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTTTTTCCTATTCAGAGAATTAAATCCCAATCTCGAAATTTCAGATCTCTTCTTGGCTCTTCACGGCTATCAG : GTAACTTTGTATATTACTACAACAGTACATTTACAATAAGATCATTTTACTCTGAAGACCTCCAAGATCATTTCCAGAACATCATCACAAAGCGGTTTTTTTTTTTTTGTGGTTCTATTCTGAATATAGAAATGTTTGATCTGGCTTGCTCTTAGATAGCTGTACGGTGTAGATCAGTAGAAAGTTGTTGGTTTGCTCTAGTTGCTATGGTGGATGTGGCTGGCAACACGTCG : AAAACCTCCTTGGATTTGGGATCCTTCGTTGGCGATTTGAATGTTGATGATGAAACTGCCAG : TGATGATATATCCCTTGAGGGACTCGAGGAAGAGTTACAGGAATGTCAAGCTGATGAT : GTTGTCGCAAACATACTTTCTAAAGGTACAACGTTGCGGGAATACACTAAAGGCGTTGAAAATAATTTACGTCAAGTCGAATTGGATTCTATCCAG : GATTACATAAAGGAAAGTGATAATCTCGTCTCACTTCATGATCAAATTCGTGATTGCGACATGATTCTATCACAGATGGAAACTCTTCTCAGTGGATTTCAG : GCAGAGATAGGTTCTATAAGTTCAGATATCAAAATTCTCCAAGAGAAGTCTATGGATATGGGAGTGAGGCTGAAGAATCGCAAG : GTAGCAGAGTCAAAGTTGGCAAAGTTTGTTGAAGATATTATTGTTCCTCCAAGGATGATTGACATAATTGTTGATGAAGAG : GTTAATGAGGAATACATGAGGACCCTTGAAATTTTGAGTAAAAAACTGAAGTGTGCAGATGCAGATCCCACAGTTAAAACATCAAAAGCCCTGAAAGATGTGCAGCCTGAGCTAGAAAAACTTCGGCAGAAAGCTGTCTCCAAG : GTGTTTGATTTCATGGTTCAGAAGCTATACGCTTTAAGGAAGCCCAAAACTAATATCCAGATCCTTCAGCAGAGTGTCCTCCTAAAATATAA : GTATATCCTTTCCTTTCTCAAGGAGCATGGGAAGGAAGTGTATCTTGAGGTTCGAGCTGCATATATTGACACAATGAACAAG : GTTCTGAGTGCACAGTTCCGCGCTTATATTCAAGCTTTAGAAAAGCTTCAGTTGGATATAGCAACATCTAATGATCTGATAGGTGTTGAGACCAGAAGCACAGGTCTTTTTTCGAGAGGAAGAGAACCATTGAAGAACAGGTCTGCAGTTTTTGCTCTTGGAGAAAGGATAAACATTCTCAAG : GAGATTGAGGAACCTCCATTAATTCCACATATTGCTGAAGCCAGCTCAAAAAAATATCCGTATGAGGTCCTTTTCAGGAGTTTGCACAAGCTGCTCATGGATACTGCTTCTTCTGA : GTACCTTTTCTGTGATGATTTCTTTGGAGAACAGACCATGTTTCATGATATTTTTGCTG : GCCCGTTTTCAGTAATTGATGAGCATTTCAGCACAATTCTTCCTAATAGTTTTGATGCAATTGGCTTAATGCTCATGATTCGCATCATACACCAGCACCAG : CTTGTAATGTCCAGGCGCCGAATTCCATGCCTGGATTCATACTTAGACAAG : GTCAATATTGCTTTATGGCCACGTTTCAAGATGGTCTTTGACTTGCACCTCCACAGCCTGCGAAATGCCAATATCAGGACTCTCTGGGAAGATGATGTTCACCCACATTATGTCATAAGGCGCTATGCTGAGTTTTCTGCGTCCCTTATTCACCTTAATGTAGAATACAAAGATGGCCAG : CTTGAACTGAATCTGGAGAGACTCAGAATGGCTGTTGATGACTTGCTTGTCAAGCTATCACAAATGTTTGCTAAACAAAAGTTGCAAACAGTATTCCTTATAAACAACTATGACATGATAATATCGGTTCTGAAG : GAAGCTGGTCCAGATGGCGGGAAAATCCAGCAGCACTTTGAGGAGCTTCTAAAGAATAACACAGCCATATTCGTG : GAAGAATTGCTGTTGGAGCATTTTAACGATCTCATCAAATTTGTAAAGACGAGAGGGT : CTGAGGATCCAAGTACTGGCACTGAAAGACCTATAACTATTGCTGAAGTTGAGCCGATTGTAAAGGACTTTGCAAGCAGATGGAAAGCTGCCATTGAGCTTATGCACAATGATGTGATTACTTCTTTCAGCAATTTCCTGTGTGGTATGGACATTCTAAGAGCTGCATTAACTCAACTTCTTCTCTATTATACAAGGCTTTCAGATTGTATAAAGAGGATAAATGGTGGTTCTACCTTGAACAAGGATCTTGTTTCAGTTTCATCGATAATGTATGAGATCAGAAAATACTCGAGGACTTTCTAGGACATTTTTCTCTTTTCAAGTCCGTATTACAGTCTCTTGAATTTGTATTTACCTATAAAAGAATTTCAGTTGACCATCACATTGTTATTCACATTTTGTAAGATTGTATTGACATTTTCTGCAACTTATTAATGTGTGTAATAATCTTTATGATACTATTTATAATTCGGGCTTTCACTTTCAGCCCGATGGTGATCACTTTTACGC</gDNA_template>
            <first_frame> T  F  F  L  F  R  E  L  N  P  N  L  E  I  S  D  L  F  L  A  L  H  G  Y  Q  :  V  T  L  Y  I  T  T  T  V  H  L  Q  *  D  H  F  T  L  K  T  S  K  I  I  S  R  T  S  S  Q  S  G  F  F  F  F  V  V  L  F  *  I  *  K  C  L  I  W  L  A  L  R  *  L  Y  G  V  D  Q  *  K  V  V  G  L  L  *  L  L  W  W  M  W  L  A  T  R  R :   K  P  P  W  I  W  D  P  S  L  A  I  *  M  L  M  M  K  L  P   : V  M  I  Y  P  L  R  D  S  R  K  S  Y  R  N  V  K  L  M  M :   L  S  Q  T  Y  F  L  K  V  Q  R  C  G  N  T  L  K  A  L  K  I  I  Y  V  K  S  N  W  I  L  S  R :   I  T  *  R  K  V  I  I  S  S  H  F  M  I  K  F  V  I  A  T  *  F  Y  H  R  W  K  L  F  S  V  D  F  R :   Q  R  *  V  L  *  V  Q  I  S  K  F  S  K  R  S  L  W  I  W  E  *  G  *  R  I  A  R :   *  Q  S  Q  S  W  Q  S  L  L  K  I  L  L  F  L  Q  G  *  L  T  *  L  L  M  K  R :   L  M  R  N  T  *  G  P  L  K  F  *  V  K  N  *  S  V  Q  M  Q  I  P  Q  L  K  H  Q  K  P  *  K  M  C  S  L  S  *  K  N  F  G  R  K  L  S  P  R :   C  L  I  S  W  F  R  S  Y  T  L  *  G  S  P  K  L  I  S  R  S  F  S  R  V  S  S  *  N  I   : S  I  S  F  P  F  S  R  S  M  G  R  K  C  I  L  R  F  E  L  H  I  L  T  Q  *  T  R :   F  *  V  H  S  S  A  L  I  F  K  L  *  K  S  F  S  W  I  *  Q  H  L  M  I  *  *  V  L  R  P  E  A  Q  V  F  F  R  E  E  E  N  H  *  R  T  G  L  Q  F  L  L  L  E  K  G  *  T  F  S  R :   R  L  R  N  L  H  *  F  H  I  L  L  K  P  A  Q  K  N  I  R  M  R  S  F  S  G  V  C  T  S  C  S  W  I  L  L  L  L   : S  T  F  S  V  M  I  S  L  E  N  R  P  C  F  M  I  F  L  L  :  A  R  F  Q  *  L  M  S  I  S  A  Q  F  F  L  I  V  L  M  Q  L  A  *  C  S  *  F  A  S  Y  T  S  T  S :   L  *  C  P  G  A  E  F  H  A  W  I  H  T  *  T  R :   S  I  L  L  Y  G  H  V  S  R  W  S  L  T  C  T  S  T  A  C  E  M  P  I  S  G  L  S  G  K  M  M  F  T  H  I  M  S  *  G  A  M  L  S  F  L  R  P  L  F  T  L  M  *  N  T  K  M  A  S :   L  N  *  I  W  R  D  S  E  W  L  L  M  T  C  L  S  S  Y  H  K  C  L  L  N  K  S  C  K  Q  Y  S  L  *  T  T  M  T  *  *  Y  R  F  *  R :   K  L  V  Q  M  A  G  K  S  S  S  T  L  R  S  F  *  R  I  T  Q  P  Y  S  W :   K  N  C  C  W  S  I  L  T  I  S  S  N  L  *  R  R  E  G  :  L  R  I  Q  V  L  A  L  K  D  L  *  L  L  L  K  L  S  R  L  *  R  T  L  Q  A  D  G  K  L  P  L  S  L  C  T  M  M  *  L  L  L  S  A  I  S  C  V  V  W  T  F  *  E  L  H  *  L  N  F  F  S  I  I  Q  G  F  Q  I  V  *  R  G  *  M  V  V  L  P  *  T  R  I  L  F  Q  F  H  R  *  C  M  R  S  E  N  T  R  G  L  S  R  T  F  F  S  F  Q  V  R  I  T  V  S  *  I  C  I  Y  L  *  K  N  F  S  *  P  S  H  C  Y  S  H  F  V  R  L  Y  *  H  F  L  Q  L  I  N  V  C  N  N  L  Y  D  T  I  Y  N  S  G  F  H  F  Q  P  D  G  D  H  F  Y   </first_frame>
            <second_frame>  L  F  S  Y  S  E  N  *  I  P  I  S  K  F  Q  I  S  S  W  L  F  T  A  I  R :   *  L  C  I  L  L  Q  Q  Y  I  Y  N  K  I  I  L  L  *  R  P  P  R  S  F  P  E  H  H  H  K  A  V  F  F  F  L  W  F  Y  S  E  Y  R  N  V  *  S  G  L  L  L  D  S  C  T  V  *  I  S  R  K  L  L  V  C  S  S  C  Y  G  G  C  G  W  Q  H  V   : E  N  L  L  G  F  G  I  L  R  W  R  F  E  C  *  *  *  N  C  Q  :  *  *  Y  I  P  *  G  T  R  G  R  V  T  G  M  S  S  *  *   : C  C  R  K  H  T  F  *  R  Y  N  V  A  G  I  H  *  R  R  *  K  *  F  T  S  S  R  I  G  F  Y  P   : G  L  H  K  G  K  *  *  S  R  L  T  S  *  S  N  S  *  L  R  H  D  S  I  T  D  G  N  S  S  Q  W  I  S   : G  R  D  R  F  Y  K  F  R  Y  Q  N  S  P  R  E  V  Y  G  Y  G  S  E  A  E  E  S  Q   : G  S  R  V  K  V  G  K  V  C  *  R  Y  Y  C  S  S  K  D  D  *  H  N  C  *  *  R   : G  *  *  G  I  H  E  D  P  *  N  F  E  *  K  T  E  V  C  R  C  R  S  H  S  *  N  I  K  S  P  E  R  C  A  A  *  A  R  K  T  S  A  E  S  C  L  Q   : G  V  *  F  H  G  S  E  A  I  R  F  K  E  A  Q  N  *  Y  P  D  P  S  A  E  C  P  P  K  I  *  :  V  Y  P  F  L  S  Q  G  A  W  E  G  S  V  S  *  G  S  S  C  I  Y  *  H  N  E  Q   : G  S  E  C  T  V  P  R  L  Y  S  S  F  R  K  A  S  V  G  Y  S  N  I  *  *  S  D  R  C  *  D  Q  K  H  R  S  F  F  E  R  K  R  T  I  E  E  Q  V  C  S  F  C  S  W  R  K  D  K  H  S  Q   : G  D  *  G  T  S  I  N  S  T  Y  C  *  S  Q  L  K  K  I  S  V  *  G  P  F  Q  E  F  A  Q  A  A  H  G  Y  C  F  F  *  :  V  P  F  L  *  *  F  L  W  R  T  D  H  V  S  *  Y  F  C  W :   P  V  F  S  N  *  *  A  F  Q  H  N  S  S  *  *  F  *  C  N  W  L  N  A  H  D  S  H  H  T  P  A  P   : A  C  N  V  Q  A  P  N  S  M  P  G  F  I  L  R  Q   : G  Q  Y  C  F  M  A  T  F  Q  D  G  L  *  L  A  P  P  Q  P  A  K  C  Q  Y  Q  D  S  L  G  R  *  C  S  P  T  L  C  H  K  A  L  C  *  V  F  C  V  P  Y  S  P  *  C  R  I  Q  R  W  P   : A  *  T  E  S  G  E  T  Q  N  G  C  *  *  L  A  C  Q  A  I  T  N  V  C  *  T  K  V  A  N  S  I  P  Y  K  Q  L  *  H  D  N  I  G  S  E   : G  S  W  S  R  W  R  E  N  P  A  A  L  *  G  A  S  K  E  *  H  S  H  I  R   : G  R  I  A  V  G  A  F  *  R  S  H  Q  I  C  K  D  E  R  V :   *  G  S  K  Y  W  H  *  K  T  Y  N  Y  C  *  S  *  A  D  C  K  G  L  C  K  Q  M  E  S  C  H  *  A  Y  A  Q  *  C  D  Y  F  F  Q  Q  F  P  V  W  Y  G  H  S  K  S  C  I  N  S  T  S  S  L  L  Y  K  A  F  R  L  Y  K  E  D  K  W  W  F  Y  L  E  Q  G  S  C  F  S  F  I  D  N  V  *  D  Q  K  I  L  E  D  F  L  G  H  F  S  L  F  K  S  V  L  Q  S  L  E  F  V  F  T  Y  K  R  I  S  V  D  H  H  I  V  I  H  I  L  *  D  C  I  D  I  F  C  N  L  L  M  C  V  I  I  F  M  I  L  F  I  I  R  A  F  T  F  S  P  M  V  I  T  F  T  </second_frame>
            <third_frame>   F  F  P  I  Q  R  I  K  S  Q  S  R  N  F  R  S  L  L  G  S  S  R  L  S   : G  N  F  V  Y  Y  Y  N  S  T  F  T  I  R  S  F  Y  S  E  D  L  Q  D  H  F  Q  N  I  I  T  K  R  F  F  F  F  C  G  S  I  L  N  I  E  M  F  D  L  A  C  S  *  I  A  V  R  C  R  S  V  E  S  C  W  F  A  L  V  A  M  V  D  V  A  G  N  T  S  :  K  T  S  L  D  L  G  S  F  V  G  D  L  N  V  D  D  E  T  A  S :   D  D  I  S  L  E  G  L  E  E  E  L  Q  E  C  Q  A  D  D  :  V  V  A  N  I  L  S  K  G  T  T  L  R  E  Y  T  K  G  V  E  N  N  L  R  Q  V  E  L  D  S  I  Q  :  D  Y  I  K  E  S  D  N  L  V  S  L  H  D  Q  I  R  D  C  D  M  I  L  S  Q  M  E  T  L  L  S  G  F  Q  :  A  E  I  G  S  I  S  S  D  I  K  I  L  Q  E  K  S  M  D  M  G  V  R  L  K  N  R  K  :  V  A  E  S  K  L  A  K  F  V  E  D  I  I  V  P  P  R  M  I  D  I  I  V  D  E  E  :  V  N  E  E  Y  M  R  T  L  E  I  L  S  K  K  L  K  C  A  D  A  D  P  T  V  K  T  S  K  A  L  K  D  V  Q  P  E  L  E  K  L  R  Q  K  A  V  S  K  :  V  F  D  F  M  V  Q  K  L  Y  A  L  R  K  P  K  T  N  I  Q  I  L  Q  Q  S  V  L  L  K  Y  K :   Y  I  L  S  F  L  K  E  H  G  K  E  V  Y  L  E  V  R  A  A  Y  I  D  T  M  N  K  :  V  L  S  A  Q  F  R  A  Y  I  Q  A  L  E  K  L  Q  L  D  I  A  T  S  N  D  L  I  G  V  E  T  R  S  T  G  L  F  S  R  G  R  E  P  L  K  N  R  S  A  V  F  A  L  G  E  R  I  N  I  L  K  :  E  I  E  E  P  P  L  I  P  H  I  A  E  A  S  S  K  K  Y  P  Y  E  V  L  F  R  S  L  H  K  L  L  M  D  T  A  S  S  E :   Y  L  F  C  D  D  F  F  G  E  Q  T  M  F  H  D  I  F  A   : G  P  F  S  V  I  D  E  H  F  S  T  I  L  P  N  S  F  D  A  I  G  L  M  L  M  I  R  I  I  H  Q  H  Q  :  L  V  M  S  R  R  R  I  P  C  L  D  S  Y  L  D  K  :  V  N  I  A  L  W  P  R  F  K  M  V  F  D  L  H  L  H  S  L  R  N  A  N  I  R  T  L  W  E  D  D  V  H  P  H  Y  V  I  R  R  Y  A  E  F  S  A  S  L  I  H  L  N  V  E  Y  K  D  G  Q  :  L  E  L  N  L  E  R  L  R  M  A  V  D  D  L  L  V  K  L  S  Q  M  F  A  K  Q  K  L  Q  T  V  F  L  I  N  N  Y  D  M  I  I  S  V  L  K  :  E  A  G  P  D  G  G  K  I  Q  Q  H  F  E  E  L  L  K  N  N  T  A  I  F  V  :  E  E  L  L  L  E  H  F  N  D  L  I  K  F  V  K  T  R  G   : S  E  D  P  S  T  G  T  E  R  P  I  T  I  A  E  V  E  P  I  V  K  D  F  A  S  R  W  K  A  A  I  E  L  M  H  N  D  V  I  T  S  F  S  N  F  L  C  G  M  D  I  L  R  A  A  L  T  Q  L  L  L  Y  Y  T  R  L  S  D  C  I  K  R  I  N  G  G  S  T  L  N  K  D  L  V  S  V  S  S  I  M  Y  E  I  R  K  Y  S  R  T  F  *  D  I  F  L  F  S  S  P  Y  Y  S  L  L  N  L  Y  L  P  I  K  E  F  Q  L  T  I  T  L  L  F  T  F  C  K  I  V  L  T  F  S  A  T  Y  *  C  V  *  *  S  L  *  Y  Y  L  *  F  G  L  S  L  S  A  R  W  *  S  L  L  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68290" stop="68213"/>
                    <exon start="68098" stop="68037"/>
                    <exon start="67926" stop="67869"/>
                    <exon start="67702" stop="67607"/>
                    <exon start="66333" stop="66232"/>
                    <exon start="65913" stop="65830"/>
                    <exon start="64688" stop="64608"/>
                    <exon start="63860" stop="63717"/>
                    <exon start="62418" stop="62327"/>
                    <exon start="61041" stop="60960"/>
                    <exon start="60215" stop="60033"/>
                    <exon start="58903" stop="58788"/>
                    <exon start="58647" stop="58589"/>
                    <exon start="58176" stop="58076"/>
                    <exon start="57044" stop="56994"/>
                    <exon start="56301" stop="56122"/>
                    <exon start="56038" stop="55904"/>
                    <exon start="55469" stop="55395"/>
                    <exon start="54993" stop="54936"/>
                    <exon start="54863" stop="54559"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2139</number_coding_nucleotides>
                  <number_encoded_amino_acids>713</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IAVRCRSVESCWFALVAMVDVAGNTSKTSLDLGSFVGDLNVDDETASDDISLEGLEEELQECQADDVVANILSKGTTLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDMILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGVRLKNRKVAESKLAKFVEDIIVPPRMIDIIVDEEVNEEYMRTLEILSKKLKCADADPTVKTSKALKDVQPELEKLRQKAVSKVFDFMVQKLYALRKPKTNIQILQQSVLLKYKYILSFLKEHGKEVYLEVRAAYIDTMNKVLSAQFRAYIQALEKLQLDIATSNDLIGVETRSTGLFSRGREPLKNRSAVFALGERINILKEIEEPPLIPHIAEASSKKYPYEVLFRSLHKLLMDTASSEYLFCDDFFGEQTMFHDIFAGPFSVIDEHFSTILPNSFDAIGLMLMIRIIHQHQLVMSRRRIPCLDSYLDKVNIALWPRFKMVFDLHLHSLRNANIRTLWEDDVHPHYVIRRYAEFSASLIHLNVEYKDGQLELNLERLRMAVDDLLVKLSQMFAKQKLQTVFLINNYDMIISVLKEAGPDGGKIQQHFEELLKNNTAIFVEELLLEHFNDLIKFVKTRGSEDPSTGTERPITIAEVEPIVKDFASRWKAAIELMHNDVITSFSNFLCGMDILRAALTQLLLYYTRLSDCIKRINGGSTLNKDLVSVSSIMYEIRKYSRTF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71399" stop="71327"/>
                    <exon start="68445" stop="68291"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFPIQRIKSQSRNFRSLLGSSRLSGNFVYYYNSTFTIRSFYSEDLQDHFQNIITKRFFFFCGSILNIEMFDLACS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="74707" PGL_stop="76670"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74707" e_stop="75021"/>
            <exon e_start="76152" e_stop="76290"/>
            <exon e_start="76501" e_stop="76670"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.970" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74707" e_stop="75021" e_length="315"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="75022" i_stop="76151" i_length="1130"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="76152" e_stop="76290" e_length="139"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.970">
            <gDNA_intron_boundary i_start="76291" i_stop="76500" i_length="210"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76501" e_stop="76670" e_length="170"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74707" stop="75021"/>
              <exon start="76152" stop="76290"/>
              <exon start="76501" stop="76670"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601800" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGAAAGGAGGACAGCAACAAAAATACGGCACCGAATTCGAAATCGGAGAAAATGGAGGACGAAAAATCGGAGGCATCATGGAGGAAAGAAGTTGACACCAATGTCAAGAGGCTTCATTCCATGCTATTTGGAGCAGAAGTAGCTCTCAAAAGTAAGGATTTCAGTTCTGCAACGGTACTTGGACTAGGACTTATCGGATTCCTCGATTCCCATTCTCATTCAGACGCCGACGAGGCTTTCATTCGTCCTATTCGTTGTGAAGCTATGTCAAATTTTGATTCTGCTCGAAGCTCCCTCATAACTGAATCCGATCG : CCACGCTTTTGAACAAGCAGGGAGAGATCCAGGCTGCATATTTGCCCAAGGAAAAAATATTGACATTGAGAAGATTAAGCAGTCTAAATACTTTCTTTCTCTTTGTCAGCAACATGAAGACACAGCTAAAGGTGAACAG : GGAAATCAATTAAACAGACATGCCAATGTGGGTAGCCAAACCTTGAAAACACCTGTACATACTAGTCCAAGAGATTTCTCCTTGATAAAAAATAGAAGCTTTGCAAATGATAGTAGCCCAGAGGTTCTTCCTGTTGATAGGTTTCACCCAAAGCATAGCTACCCAAAGCA</gDNA_template>
            <first_frame> G  K  G  G  Q  Q  Q  K  Y  G  T  E  F  E  I  G  E  N  G  G  R  K  I  G  G  I  M  E  E  R  S  *  H  Q  C  Q  E  A  S  F  H  A  I  W  S  R  S  S  S  Q  K  *  G  F  Q  F  C  N  G  T  W  T  R  T  Y  R  I  P  R  F  P  F  S  F  R  R  R  R  G  F  H  S  S  Y  S  L  *  S  Y  V  K  F  *  F  C  S  K  L  P  H  N  *  I  R  S  :  P  R  F  *  T  S  R  E  R  S  R  L  H  I  C  P  R  K  K  Y  *  H  *  E  D  *  A  V  *  I  L  S  F  S  L  S  A  T  *  R  H  S  *  R  *  T   : G  K  S  I  K  Q  T  C  Q  C  G  *  P  N  L  E  N  T  C  T  Y  *  S  K  R  F  L  L  D  K  K  *  K  L  C  K  *  *  *  P  R  G  S  S  C  *  *  V  S  P  K  A  *  L  P  K  A </first_frame>
            <second_frame>  G  K  E  D  S  N  K  N  T  A  P  N  S  K  S  E  K  M  E  D  E  K  S  E  A  S  W  R  K  E  V  D  T  N  V  K  R  L  H  S  M  L  F  G  A  E  V  A  L  K  S  K  D  F  S  S  A  T  V  L  G  L  G  L  I  G  F  L  D  S  H  S  H  S  D  A  D  E  A  F  I  R  P  I  R  C  E  A  M  S  N  F  D  S  A  R  S  S  L  I  T  E  S  D  R :   H  A  F  E  Q  A  G  R  D  P  G  C  I  F  A  Q  G  K  N  I  D  I  E  K  I  K  Q  S  K  Y  F  L  S  L  C  Q  Q  H  E  D  T  A  K  G  E  Q  :  G  N  Q  L  N  R  H  A  N  V  G  S  Q  T  L  K  T  P  V  H  T  S  P  R  D  F  S  L  I  K  N  R  S  F  A  N  D  S  S  P  E  V  L  P  V  D  R  F  H  P  K  H  S  Y  P  K   </second_frame>
            <third_frame>   E  R  R  T  A  T  K  I  R  H  R  I  R  N  R  R  K  W  R  T  K  N  R  R  H  H  G  G  K  K  L  T  P  M  S  R  G  F  I  P  C  Y  L  E  Q  K  *  L  S  K  V  R  I  S  V  L  Q  R  Y  L  D  *  D  L  S  D  S  S  I  P  I  L  I  Q  T  P  T  R  L  S  F  V  L  F  V  V  K  L  C  Q  I  L  I  L  L  E  A  P  S  *  L  N  P  I   : A  T  L  L  N  K  Q  G  E  I  Q  A  A  Y  L  P  K  E  K  I  L  T  L  R  R  L  S  S  L  N  T  F  F  L  F  V  S  N  M  K  T  Q  L  K  V  N  R :   E  I  N  *  T  D  M  P  M  W  V  A  K  P  *  K  H  L  Y  I  L  V  Q  E  I  S  P  *  *  K  I  E  A  L  Q  M  I  V  A  Q  R  F  F  L  L  I  G  F  T  Q  S  I  A  T  Q  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74708" stop="75021"/>
                    <exon start="76152" stop="76290"/>
                    <exon start="76501" stop="76668"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKEDSNKNTAPNSKSEKMEDEKSEASWRKEVDTNVKRLHSMLFGAEVALKSKDFSSATVLGLGLIGFLDSHSHSDADEAFIRPIRCEAMSNFDSARSSLITESDRHAFEQAGRDPGCIFAQGKNIDIEKIKQSKYFLSLCQQHEDTAKGEQGNQLNRHANVGSQTLKTPVHTSPRDFSLIKNRSFANDSSPEVLPVDRFHPKHSYPK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="78426" PGL_stop="80914"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78426" e_stop="78462"/>
            <exon e_start="78543" e_stop="78635"/>
            <exon e_start="79153" e_stop="79254"/>
            <exon e_start="79838" e_stop="79940"/>
            <exon e_start="80217" e_stop="80300"/>
            <exon e_start="80382" e_stop="80477"/>
            <exon e_start="80618" e_stop="80745"/>
            <exon e_start="80873" e_stop="80914"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.917" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.377" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.622" acc_prob="0.708" e_score="1.000"/>
          <exon-intron don_prob="0.003" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.704" acc_prob="0.998" e_score="0.992"/>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78426" e_stop="78462" e_length="37"/>
          </exon>
          <intron i_serial="1" don_prob="0.917" acc_prob="0.999">
            <gDNA_intron_boundary i_start="78463" i_stop="78542" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="78543" e_stop="78635" e_length="93"/>
          </exon>
          <intron i_serial="2" don_prob="0.916" acc_prob="0.983">
            <gDNA_intron_boundary i_start="78636" i_stop="79152" i_length="517"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="79153" e_stop="79254" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.377">
            <gDNA_intron_boundary i_start="79255" i_stop="79837" i_length="583"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="79838" e_stop="79940" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.875" acc_prob="0.989">
            <gDNA_intron_boundary i_start="79941" i_stop="80216" i_length="276"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="80217" e_stop="80300" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.622" acc_prob="0.708">
            <gDNA_intron_boundary i_start="80301" i_stop="80381" i_length="81"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="80382" e_stop="80477" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.003" acc_prob="1.000">
            <gDNA_intron_boundary i_start="80478" i_stop="80617" i_length="140"/>
          </intron>
          <exon e_serial="7" e_score="0.992">
            <gDNA_exon_boundary e_start="80618" e_stop="80745" e_length="128"/>
          </exon>
          <intron i_serial="7" don_prob="0.704" acc_prob="0.998">
            <gDNA_intron_boundary i_start="80746" i_stop="80872" i_length="127"/>
          </intron>
          <exon e_serial="8" e_score="0.952">
            <gDNA_exon_boundary e_start="80873" e_stop="80914" e_length="42"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78426" stop="78462"/>
              <exon start="78543" stop="78635"/>
              <exon start="79153" stop="79254"/>
              <exon start="79838" stop="79940"/>
              <exon start="80217" stop="80300"/>
              <exon start="80382" stop="80477"/>
              <exon start="80618" stop="80745"/>
              <exon start="80873" stop="80914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603299" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCTCCAGGTCGAGGTCTTCTTCTGTTTGGTCCACCA : GGAACTGGCAAAACAATGATAGGGAAAGCTATTGCTGGTGAGGCAAAAGCAACCTTCTTTTACATATCTGCCAGCTCTTTGACAAGCAAGTGG : ATTGGAGAGGGGGAGAAGCTGGTGAGGGCACTTTTTGGAGTGGCCAGTTGTCGTCAACCAGCTGTTATTTTCGTTGATGAAATAGATTCTCTGTTGTCTCAG : CGCAAGTCAGAAGGTGAACATGAATCTAGTAGGCGCCTGAAGACACAATTTCTGATCGAGATGGAAGGCTTTGACAATGTGAGCGAACAAATTCTTCTTATAG : GTGCAACAAACAGGCCCCAAGAGCTTGATGAGGCTGCAAGGAGACGGCTTACTAAAAGACTTTATGTTCCACTTCCTTCCTCAG : AAGCACGAGCTTGGATTGCCAAGAGTCTATTGGAGAAGGATGGGTTGTTTAAGCTTTCAGATGACGATATTGTCTCTATTTGCAAATTTACGGAAG : GGTATTCTGGGTCTGACATGAAGAATTTAGTGAAGGATGCTTCCATGGGTCCATTGAGGGAAGCTCTAAGGCACGGTATTGAAATTACAAAGCTAAAGAAGGAGGATATGAGGCCAGTAACTCTTCAG : GACTTTGAGAGTGCATTACAAGAGGTAAGGCCTTCTGTGTCT</gDNA_template>
            <first_frame> I  S  R  S  R  S  S  S  V  W  S  T   : R  N  W  Q  N  N  D  R  E  S  Y  C  W  *  G  K  S  N  L  L  L  H  I  C  Q  L  F  D  K  Q  V   : D  W  R  G  G  E  A  G  E  G  T  F  W  S  G  Q  L  S  S  T  S  C  Y  F  R  *  *  N  R  F  S  V  V  S   : A  Q  V  R  R  *  T  *  I  *  *  A  P  E  D  T  I  S  D  R  D  G  R  L  *  Q  C  E  R  T  N  S  S  Y  R :   C  N  K  Q  A  P  R  A  *  *  G  C  K  E  T  A  Y  *  K  T  L  C  S  T  S  F  L  R :   S  T  S  L  D  C  Q  E  S  I  G  E  G  W  V  V  *  A  F  R  *  R  Y  C  L  Y  L  Q  I  Y  G  R :   V  F  W  V  *  H  E  E  F  S  E  G  C  F  H  G  S  I  E  G  S  S  K  A  R  Y  *  N  Y  K  A  K  E  G  G  Y  E  A  S  N  S  S   : G  L  *  E  C  I  T  R  G  K  A  F  C  V  </first_frame>
            <second_frame>  S  P  G  R  G  L  L  L  F  G  P  P  :  G  T  G  K  T  M  I  G  K  A  I  A  G  E  A  K  A  T  F  F  Y  I  S  A  S  S  L  T  S  K  W  :  I  G  E  G  E  K  L  V  R  A  L  F  G  V  A  S  C  R  Q  P  A  V  I  F  V  D  E  I  D  S  L  L  S  Q  :  R  K  S  E  G  E  H  E  S  S  R  R  L  K  T  Q  F  L  I  E  M  E  G  F  D  N  V  S  E  Q  I  L  L  I   : G  A  T  N  R  P  Q  E  L  D  E  A  A  R  R  R  L  T  K  R  L  Y  V  P  L  P  S  S   : E  A  R  A  W  I  A  K  S  L  L  E  K  D  G  L  F  K  L  S  D  D  D  I  V  S  I  C  K  F  T  E   : G  Y  S  G  S  D  M  K  N  L  V  K  D  A  S  M  G  P  L  R  E  A  L  R  H  G  I  E  I  T  K  L  K  K  E  D  M  R  P  V  T  L  Q  :  D  F  E  S  A  L  Q  E  V  R  P  S  V  S </second_frame>
            <third_frame>   L  Q  V  E  V  F  F  C  L  V  H  Q :   E  L  A  K  Q  *  *  G  K  L  L  L  V  R  Q  K  Q  P  S  F  T  Y  L  P  A  L  *  Q  A  S  G :   L  E  R  G  R  S  W  *  G  H  F  L  E  W  P  V  V  V  N  Q  L  L  F  S  L  M  K  *  I  L  C  C  L  S :   A  S  Q  K  V  N  M  N  L  V  G  A  *  R  H  N  F  *  S  R  W  K  A  L  T  M  *  A  N  K  F  F  L  *  :  V  Q  Q  T  G  P  K  S  L  M  R  L  Q  G  D  G  L  L  K  D  F  M  F  H  F  L  P  Q  :  K  H  E  L  G  L  P  R  V  Y  W  R  R  M  G  C  L  S  F  Q  M  T  I  L  S  L  F  A  N  L  R  K  :  G  I  L  G  L  T  *  R  I  *  *  R  M  L  P  W  V  H  *  G  K  L  *  G  T  V  L  K  L  Q  S  *  R  R  R  I  *  G  Q  *  L  F  R :   T  L  R  V  H  Y  K  R  *  G  L  L  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78427" stop="78462"/>
                    <exon start="78543" stop="78635"/>
                    <exon start="79153" stop="79254"/>
                    <exon start="79838" stop="79940"/>
                    <exon start="80217" stop="80300"/>
                    <exon start="80382" stop="80477"/>
                    <exon start="80618" stop="80745"/>
                    <exon start="80873" stop="80914"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDNVSEQILLIGATNRPQELDEAARRRLTKRLYVPLPSSEARAWIAKSLLEKDGLFKLSDDDIVSICKFTEGYSGSDMKNLVKDASMGPLREALRHGIEITKLKKEDMRPVTLQDFESALQEVRPSVS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="97471" PGL_stop="90564"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97471" e_stop="97148"/>
            <exon e_start="96907" e_stop="96792"/>
            <exon e_start="96701" e_stop="96639"/>
            <exon e_start="96549" e_stop="96513"/>
            <exon e_start="96325" e_stop="96244"/>
            <exon e_start="94362" e_stop="94244"/>
            <exon e_start="94107" e_stop="94012"/>
            <exon e_start="93015" e_stop="92905"/>
            <exon e_start="92826" e_stop="92725"/>
            <exon e_start="91596" e_stop="91549"/>
            <exon e_start="91325" e_stop="91110"/>
            <exon e_start="90908" e_stop="90564"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.470" e_score="1.000"/>
          <exon-intron don_prob="0.582" acc_prob="0.906" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.302" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.959" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="97471" e_stop="97148" e_length="324"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.902">
            <gDNA_intron_boundary i_start="97147" i_stop="96908" i_length="240"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="96907" e_stop="96792" e_length="116"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.470">
            <gDNA_intron_boundary i_start="96791" i_stop="96702" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="96701" e_stop="96639" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.582" acc_prob="0.906">
            <gDNA_intron_boundary i_start="96638" i_stop="96550" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="96549" e_stop="96513" e_length="37"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.990">
            <gDNA_intron_boundary i_start="96512" i_stop="96326" i_length="187"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96325" e_stop="96244" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="96243" i_stop="94363" i_length="1881"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="94362" e_stop="94244" e_length="119"/>
          </exon>
          <intron i_serial="6" don_prob="0.967" acc_prob="0.927">
            <gDNA_intron_boundary i_start="94243" i_stop="94108" i_length="136"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="94107" e_stop="94012" e_length="96"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.302">
            <gDNA_intron_boundary i_start="94011" i_stop="93016" i_length="996"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="93015" e_stop="92905" e_length="111"/>
          </exon>
          <intron i_serial="8" don_prob="0.990" acc_prob="0.988">
            <gDNA_intron_boundary i_start="92904" i_stop="92827" i_length="78"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="92826" e_stop="92725" e_length="102"/>
          </exon>
          <intron i_serial="9" don_prob="0.970" acc_prob="0.997">
            <gDNA_intron_boundary i_start="92724" i_stop="91597" i_length="1128"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="91596" e_stop="91549" e_length="48"/>
          </exon>
          <intron i_serial="10" don_prob="0.987" acc_prob="0.992">
            <gDNA_intron_boundary i_start="91548" i_stop="91326" i_length="223"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="91325" e_stop="91110" e_length="216"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.959">
            <gDNA_intron_boundary i_start="91109" i_stop="90909" i_length="201"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="90908" e_stop="90564" e_length="345"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97471" stop="97148"/>
              <exon start="96907" stop="96792"/>
              <exon start="96701" stop="96639"/>
              <exon start="96549" stop="96513"/>
              <exon start="96325" stop="96244"/>
              <exon start="94362" stop="94244"/>
              <exon start="94107" stop="94012"/>
              <exon start="93015" stop="92905"/>
              <exon start="92826" stop="92725"/>
              <exon start="91596" stop="91549"/>
              <exon start="91325" stop="91110"/>
              <exon start="90908" stop="90564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581608" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTACACACGGTGAAATGAAATAAACAATAATCCACTGTGGCAATCGAGGCGACCTCGACAAATTATCCACATCACAAGTCACACAGCACCGTTTAATTTCCAATTGCATGAAGAGTATAACCTGTCTCCACAGCCTCAAATTCGTCAGGTAGTAGGGCCGCTCCAATATTTGTACAAATCTTCTTCATCTACCTCGCACTCACACCTAGCAGGACTACTGTGAAGCCGGCGGCAAAGGAAACTGAGAAAATGCCTGGGATTAAAGGGCCTTCCGATTATTCGCGAGAACCCCCTCGCCATCCTTCTCTTAAAATTAATGCCAAG : GAACCCTTTAATGCTGAGCCAACTCGTTCAGCTCTGATTTCATCTTATGTCACTCCTGTTGATTTCTTTTACAAGAGAAACCACGGACCCATACCAGTAGTGGATGACATAGAGAG : GTATTCCGTTTCTCTGAGTGGTCTTATAAAAAATTCCAAAGACTTGTTTATGAAGGATATTTG : TAAGCTTCCAAAACATACGGTTACTGCCACTTTACAG : TGTGCTGGTAACAGAAGAACTGCTATGAGTAAGAGTCGAACAGTGAAAGGAGTTGGTTGGGATATTGCTGCTTTAGGAAATG : CTGTTTGGGGTGGAGCCAAATTGGCAGATGTTCTAGAATTAGTTGGAATACCTTATTTGGCAAGTATCACACAATCTGGAGGAAAACATGTGGAATTTGTGAGCATTGACAAGTGTAAG : GAGGAAAATGGAGGTCCTTATAAGGCATCAATTCCATTGAGTCAGGCTACAAACCCTGAAGCTGATGTTCTGCTCGCTTATGAGATGAATGGAGAG : CCACTTAATAGGGATCATGGCTATCCACTGCGTGTGGTTGTCCCTGGTGTGATAGGTGCCCGTTCAGTTAAGTGGCTTGATTCCATCAATATCATTGCCGAAGAATGCAAG : GGATTCTTTATGCAAAAAGACTACAAGATGTTTCCACCAACAGTGAATTGGGATAACATCAACTGGTCTACTAGGAGACCGCAGATGGACTTTCCTGTTCAG : AGCGCAATATGTTCCCTGGAGGATGTGAGTGTTGTAAAGCATGGAAAG : ATAAACATCAAGGGGTACGCATTATCAGGAGGTGGGCGTGGCATAGAAAGGGTAGACGTGTCTATAGATGGTGGTAAAACTTGGGAGGAAGCCACCAGATACCAGAGAACTGGTGTTCCATATATTGCTGATGATTCAAGCAGTGACAGATGGGCATGGGTCTTTTTTGAAGCTGAGGCAAATATTCCCCAGAGTGCGGAAATAGTTGCTAAAGCG : GTGGATATATCTGCAAATGTCCAACCTGAAAGTATAGATTCTGTCTGGAATCTGAGAGGAATCCTGAACACCTCATGGCATCGGGTTCATGTCCGAGTTGGTCAAGCAAATCTTTAGGCTGTGTTTGGTGTGTTGAAGCGGATGACAGTAATCAGCATATCAGGCCATGGTTGTTTGTATCCTTCTTAGCTTAAAATGAAAATAGCATGGTGGTTTGCGTCTTCCTAGCTTAAAATGAAAATAAAATGTTCTCTTGATGTTGTCTCGAAATACTTACGGAAATAATAATAATTTGGAAGTGATTGCATCTTGACAATTAATTGTGTTAGTTTCTTCTCCAGTTTC</gDNA_template>
            <first_frame> V  H  T  V  K  *  N  K  Q  *  S  T  V  A  I  E  A  T  S  T  N  Y  P  H  H  K  S  H  S  T  V  *  F  P  I  A  *  R  V  *  P  V  S  T  A  S  N  S  S  G  S  R  A  A  P  I  F  V  Q  I  F  F  I  Y  L  A  L  T  P  S  R  T  T  V  K  P  A  A  K  E  T  E  K  M  P  G  I  K  G  P  S  D  Y  S  R  E  P  P  R  H  P  S  L  K  I  N  A  K  :  E  P  F  N  A  E  P  T  R  S  A  L  I  S  S  Y  V  T  P  V  D  F  F  Y  K  R  N  H  G  P  I  P  V  V  D  D  I  E  R :   Y  S  V  S  L  S  G  L  I  K  N  S  K  D  L  F  M  K  D  I  C :   K  L  P  K  H  T  V  T  A  T  L  Q  :  C  A  G  N  R  R  T  A  M  S  K  S  R  T  V  K  G  V  G  W  D  I  A  A  L  G  N   : A  V  W  G  G  A  K  L  A  D  V  L  E  L  V  G  I  P  Y  L  A  S  I  T  Q  S  G  G  K  H  V  E  F  V  S  I  D  K  C  K  :  E  E  N  G  G  P  Y  K  A  S  I  P  L  S  Q  A  T  N  P  E  A  D  V  L  L  A  Y  E  M  N  G  E  :  P  L  N  R  D  H  G  Y  P  L  R  V  V  V  P  G  V  I  G  A  R  S  V  K  W  L  D  S  I  N  I  I  A  E  E  C  K  :  G  F  F  M  Q  K  D  Y  K  M  F  P  P  T  V  N  W  D  N  I  N  W  S  T  R  R  P  Q  M  D  F  P  V  Q  :  S  A  I  C  S  L  E  D  V  S  V  V  K  H  G  K  :  I  N  I  K  G  Y  A  L  S  G  G  G  R  G  I  E  R  V  D  V  S  I  D  G  G  K  T  W  E  E  A  T  R  Y  Q  R  T  G  V  P  Y  I  A  D  D  S  S  S  D  R  W  A  W  V  F  F  E  A  E  A  N  I  P  Q  S  A  E  I  V  A  K  A  :  V  D  I  S  A  N  V  Q  P  E  S  I  D  S  V  W  N  L  R  G  I  L  N  T  S  W  H  R  V  H  V  R  V  G  Q  A  N  L  *  A  V  F  G  V  L  K  R  M  T  V  I  S  I  S  G  H  G  C  L  Y  P  S  *  L  K  M  K  I  A  W  W  F  A  S  S  *  L  K  M  K  I  K  C  S  L  D  V  V  S  K  Y  L  R  K  *  *  *  F  G  S  D  C  I  L  T  I  N  C  V  S  F  F  S  S  F </first_frame>
            <second_frame>  Y  T  R  *  N  E  I  N  N  N  P  L  W  Q  S  R  R  P  R  Q  I  I  H  I  T  S  H  T  A  P  F  N  F  Q  L  H  E  E  Y  N  L  S  P  Q  P  Q  I  R  Q  V  V  G  P  L  Q  Y  L  Y  K  S  S  S  S  T  S  H  S  H  L  A  G  L  L  *  S  R  R  Q  R  K  L  R  K  C  L  G  L  K  G  L  P  I  I  R  E  N  P  L  A  I  L  L  L  K  L  M  P  R :   N  P  L  M  L  S  Q  L  V  Q  L  *  F  H  L  M  S  L  L  L  I  S  F  T  R  E  T  T  D  P  Y  Q  *  W  M  T  *  R   : G  I  P  F  L  *  V  V  L  *  K  I  P  K  T  C  L  *  R  I  F   : V  S  F  Q  N  I  R  L  L  P  L  Y  S :   V  L  V  T  E  E  L  L  *  V  R  V  E  Q  *  K  E  L  V  G  I  L  L  L  *  E  M  :  L  F  G  V  E  P  N  W  Q  M  F  *  N  *  L  E  Y  L  I  W  Q  V  S  H  N  L  E  E  N  M  W  N  L  *  A  L  T  S  V  R :   R  K  M  E  V  L  I  R  H  Q  F  H  *  V  R  L  Q  T  L  K  L  M  F  C  S  L  M  R  *  M  E  S :   H  L  I  G  I  M  A  I  H  C  V  W  L  S  L  V  *  *  V  P  V  Q  L  S  G  L  I  P  S  I  S  L  P  K  N  A  R :   D  S  L  C  K  K  T  T  R  C  F  H  Q  Q  *  I  G  I  T  S  T  G  L  L  G  D  R  R  W  T  F  L  F  R :   A  Q  Y  V  P  W  R  M  *  V  L  *  S  M  E  R :   *  T  S  R  G  T  H  Y  Q  E  V  G  V  A  *  K  G  *  T  C  L  *  M  V  V  K  L  G  R  K  P  P  D  T  R  E  L  V  F  H  I  L  L  M  I  Q  A  V  T  D  G  H  G  S  F  L  K  L  R  Q  I  F  P  R  V  R  K  *  L  L  K  R :   W  I  Y  L  Q  M  S  N  L  K  V  *  I  L  S  G  I  *  E  E  S  *  T  P  H  G  I  G  F  M  S  E  L  V  K  Q  I  F  R  L  C  L  V  C  *  S  G  *  Q  *  S  A  Y  Q  A  M  V  V  C  I  L  L  S  L  K  *  K  *  H  G  G  L  R  L  P  S  L  K  *  K  *  N  V  L  L  M  L  S  R  N  T  Y  G  N  N  N  N  L  E  V  I  A  S  *  Q  L  I  V  L  V  S  S  P  V   </second_frame>
            <third_frame>   T  H  G  E  M  K  *  T  I  I  H  C  G  N  R  G  D  L  D  K  L  S  T  S  Q  V  T  Q  H  R  L  I  S  N  C  M  K  S  I  T  C  L  H  S  L  K  F  V  R  *  *  G  R  S  N  I  C  T  N  L  L  H  L  P  R  T  H  T  *  Q  D  Y  C  E  A  G  G  K  G  N  *  E  N  A  W  D  *  R  A  F  R  L  F  A  R  T  P  S  P  S  F  S  *  N  *  C  Q   : G  T  L  *  C  *  A  N  S  F  S  S  D  F  I  L  C  H  S  C  *  F  L  L  Q  E  K  P  R  T  H  T  S  S  G  *  H  R  E  :  V  F  R  F  S  E  W  S  Y  K  K  F  Q  R  L  V  Y  E  G  Y  L  :  *  A  S  K  T  Y  G  Y  C  H  F  T   : V  C  W  *  Q  K  N  C  Y  E  *  E  S  N  S  E  R  S  W  L  G  Y  C  C  F  R  K  C :   C  L  G  W  S  Q  I  G  R  C  S  R  I  S  W  N  T  L  F  G  K  Y  H  T  I  W  R  K  T  C  G  I  C  E  H  *  Q  V  *   : G  G  K  W  R  S  L  *  G  I  N  S  I  E  S  G  Y  K  P  *  S  *  C  S  A  R  L  *  D  E  W  R   : A  T  *  *  G  S  W  L  S  T  A  C  G  C  P  W  C  D  R  C  P  F  S  *  V  A  *  F  H  Q  Y  H  C  R  R  M  Q   : G  I  L  Y  A  K  R  L  Q  D  V  S  T  N  S  E  L  G  *  H  Q  L  V  Y  *  E  T  A  D  G  L  S  C  S   : E  R  N  M  F  P  G  G  C  E  C  C  K  A  W  K   : D  K  H  Q  G  V  R  I  I  R  R  W  A  W  H  R  K  G  R  R  V  Y  R  W  W  *  N  L  G  G  S  H  Q  I  P  E  N  W  C  S  I  Y  C  *  *  F  K  Q  *  Q  M  G  M  G  L  F  *  S  *  G  K  Y  S  P  E  C  G  N  S  C  *  S   : G  G  Y  I  C  K  C  P  T  *  K  Y  R  F  C  L  E  S  E  R  N  P  E  H  L  M  A  S  G  S  C  P  S  W  S  S  K  S  L  G  C  V  W  C  V  E  A  D  D  S  N  Q  H  I  R  P  W  L  F  V  S  F  L  A  *  N  E  N  S  M  V  V  C  V  F  L  A  *  N  E  N  K  M  F  S  *  C  C  L  E  I  L  T  E  I  I  I  I  W  K  *  L  H  L  D  N  *  L  C  *  F  L  L  Q  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97351" stop="97148"/>
                    <exon start="96907" stop="96792"/>
                    <exon start="96701" stop="96639"/>
                    <exon start="96549" stop="96513"/>
                    <exon start="96325" stop="96244"/>
                    <exon start="94362" stop="94244"/>
                    <exon start="94107" stop="94012"/>
                    <exon start="93015" stop="92905"/>
                    <exon start="92826" stop="92725"/>
                    <exon start="91596" stop="91549"/>
                    <exon start="91325" stop="91110"/>
                    <exon start="90908" stop="90792"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1308</number_coding_nucleotides>
                  <number_encoded_amino_acids>436</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PVSTASNSSGSRAAPIFVQIFFIYLALTPSRTTVKPAAKETEKMPGIKGPSDYSREPPRHPSLKINAKEPFNAEPTRSALISSYVTPVDFFYKRNHGPIPVVDDIERYSVSLSGLIKNSKDLFMKDICKLPKHTVTATLQCAGNRRTAMSKSRTVKGVGWDIAALGNAVWGGAKLADVLELVGIPYLASITQSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGVIGARSVKWLDSINIIAEECKGFFMQKDYKMFPPTVNWDNINWSTRRPQMDFPVQSAICSLEDVSVVKHGKINIKGYALSGGGRGIERVDVSIDGGKTWEEATRYQRTGVPYIADDSSSDRWAWVFFEAEANIPQSAEIVAKAVDISANVQPESIDSVWNLRGILNTSWHRVHVRVGQANL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="97303" e_stop="97148"/>
            <exon e_start="91553" e_stop="91549"/>
            <exon e_start="91325" e_stop="91125"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.994"/>
          <exon-intron don_prob="0.987" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="97303" e_stop="97148" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="97147" i_stop="91554" i_length="5594"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91553" e_stop="91549" e_length="5"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.992">
            <gDNA_intron_boundary i_start="91548" i_stop="91326" i_length="223"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="91325" e_stop="91125" e_length="201"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97303" stop="97148"/>
              <exon start="91553" stop="91549"/>
              <exon start="91325" stop="91125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590510" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGTACAAATCTTCTTCATCTACCTCGCACTCACACCTAGCAGGACTACTGTGAAGCCGGCGGCAAAGGAAACTGAGAAAATGCCTGGGATTAAAGGGCCTTCCGATTATTCGCGAGAACCCCCTCGCCATCCTTCTCTTAAAATTAATGCCAAG : GAAAG : ATAAACATCAAGGGGTACGCATTATCAGGAGGTGGGCGTGGCATAGAAAGGGTAGACGTGTCTATAGATGGTGGTAAAACTTGGGAGGAAGCCACCAGATACCAGAGAACTGGTGTTCCATATATTGCTGATGATTCAAGCAGTGACAGATGGGCATGGGTCTTTTTTGAAGCTGAGGCAAATATTCCCCAGAGTGCGGAA</gDNA_template>
            <first_frame> F  V  Q  I  F  F  I  Y  L  A  L  T  P  S  R  T  T  V  K  P  A  A  K  E  T  E  K  M  P  G  I  K  G  P  S  D  Y  S  R  E  P  P  R  H  P  S  L  K  I  N  A  K  :  E  R :   *  T  S  R  G  T  H  Y  Q  E  V  G  V  A  *  K  G  *  T  C  L  *  M  V  V  K  L  G  R  K  P  P  D  T  R  E  L  V  F  H  I  L  L  M  I  Q  A  V  T  D  G  H  G  S  F  L  K  L  R  Q  I  F  P  R  V  R   </first_frame>
            <second_frame>  L  Y  K  S  S  S  S  T  S  H  S  H  L  A  G  L  L  *  S  R  R  Q  R  K  L  R  K  C  L  G  L  K  G  L  P  I  I  R  E  N  P  L  A  I  L  L  L  K  L  M  P  R :   K   : D  K  H  Q  G  V  R  I  I  R  R  W  A  W  H  R  K  G  R  R  V  Y  R  W  W  *  N  L  G  G  S  H  Q  I  P  E  N  W  C  S  I  Y  C  *  *  F  K  Q  *  Q  M  G  M  G  L  F  *  S  *  G  K  Y  S  P  E  C  G  </second_frame>
            <third_frame>   C  T  N  L  L  H  L  P  R  T  H  T  *  Q  D  Y  C  E  A  G  G  K  G  N  *  E  N  A  W  D  *  R  A  F  R  L  F  A  R  T  P  S  P  S  F  S  *  N  *  C  Q   : G  K  :  I  N  I  K  G  Y  A  L  S  G  G  G  R  G  I  E  R  V  D  V  S  I  D  G  G  K  T  W  E  E  A  T  R  Y  Q  R  T  G  V  P  Y  I  A  D  D  S  S  S  D  R  W  A  W  V  F  F  E  A  E  A  N  I  P  Q  S  A  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97154" stop="97148"/>
                    <exon start="91553" stop="91549"/>
                    <exon start="91325" stop="91125"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQGKINIKGYALSGGGRGIERVDVSIDGGKTWEEATRYQRTGVPYIADDSSSDRWAWVFFEAEANIPQSAE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="104451" PGL_stop="101351"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104451" e_stop="104311"/>
            <exon e_start="103742" e_stop="103174"/>
            <exon e_start="102790" e_stop="102690"/>
            <exon e_start="102186" e_stop="102103"/>
            <exon e_start="102015" e_stop="101905"/>
            <exon e_start="101816" e_stop="101351"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.793" acc_prob="0.996" e_score="0.872"/>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.856" acc_prob="0.771" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.873" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.872">
            <gDNA_exon_boundary e_start="104451" e_stop="104311" e_length="141"/>
          </exon>
          <intron i_serial="1" don_prob="0.793" acc_prob="0.996">
            <gDNA_intron_boundary i_start="104310" i_stop="103743" i_length="568"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103742" e_stop="103174" e_length="569"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="103173" i_stop="102791" i_length="383"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="102790" e_stop="102690" e_length="101"/>
          </exon>
          <intron i_serial="3" don_prob="0.856" acc_prob="0.771">
            <gDNA_intron_boundary i_start="102689" i_stop="102187" i_length="503"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="102186" e_stop="102103" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.933">
            <gDNA_intron_boundary i_start="102102" i_stop="102016" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="102015" e_stop="101905" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.873">
            <gDNA_intron_boundary i_start="101904" i_stop="101817" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="101816" e_stop="101351" e_length="466"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104451" stop="104311"/>
              <exon start="103742" stop="103174"/>
              <exon start="102790" stop="102690"/>
              <exon start="102186" stop="102103"/>
              <exon start="102015" stop="101905"/>
              <exon start="101816" stop="101351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577745" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACAGTTCTACATTCATAGATTTGGTAAATCCCAAAATATAGGGTTTCTCTACTTTTTTTTTTTCGTAAGCTTTAATTTCGGCCTATATTTCTGCATTTTTGCGTAATCTCGGATTCTTCGGTTCAAGATTGTTTGATATT : ATACTGCAACATGGAGAATATGCAGAGCTATTGGCAATTTGGCGACGAGCTTCGAGGACAATCAAAAGCCTCAGAGGATCATAAATGGTCAACAGCTGCTATAAAATTATCTGAACAGATGAAGTACAAAGGTGAACGTAGGAATAACCTTGACCTTTCAAAGAGCTCTGCTGAAATTAGGCCCAGGGGTAATCATATGTTTCAGGAAGATAACAAGTGGGAAAGCCTTAACTTCAATATGTTAAATTTGGAAAGCAAGATGACTGAAAATATGAGCAAGAATCGCATTATGGATAGCATTTTCAATGCAAATCCAGTTTATCTTAAGCCCAATTTTAACAGCTTGGGAAATTCATCTTTAAGCAAGTTCAATGCTAGCAACTATACCAAGGAACCTAGCAAGAATAACAATAACAACGTTGAGAGCACAAATGGAAATAACTCCGTTGACAAAAGGTTTAAGACTCTGCCTGCTGCTGAAACACTGCCGAAGAATGAGGTTCTTGGTGGATATATATTTGTTTGTAACAATGACACAATGCAGGAAGACCTAAAGCGCCTGCTCTTTG : GCCTTCCTCCTAGATACAGAGATTCCGTGAGGGCAATAACACCAGGGTTGCCCTTGTTCCTATATAATTACACTACTCACCAGTTGCATGGTATCTTTGAG : GCATCGAGTTTTGGAGGTTCCAACATTGATCCAACTGCCTGGGAGGATAAAAAGTGTAAAGGAGAGTCAAGGTTCCCTGCTCAG : GTGAGGATCCGTGTCCGGAAAGTCTGTAATCCTTTGGAGGAAGATGCTTTCAGACCAGTTTTACATCATTATGATGGCCCCAAGTTCCGTCTGGAGCTCTCCATTCCTGAG : ACTTTGGACTTACTAGATCTCTGTGAAAAAGCCGGTGTGTAGGTGCTATGTGCTCGTGCTGGCGTCCTGTAATAGTAAGCATAAAAGAACTGTAGCCTATGTGAATGTTATAGATTTGTGGTGCATGTCAGCAGTGTGCTGTCCGTAGATTTTCCTTAGCGTAAGCTTTGGGGTGCAAGTCTAGTTAAGAGGTTGTAAGTTTAGGATTGGCTTGTATTAGCCAAATAAGTGTAATGCTTATCTCTGAAGATATTTGCTGAGTGGCTTCACAAATTTAGCTATGTAATCTTGCAGTAAACTAGAAACAAGTAAGACAGTTATGTAATGGGTCAAGATCGAATGTGTTTCTGTATCTGCAGAGGAACTCTGCTTCATGTGATTTGTAAGGTTTGAATTCTTAACATTTCTTTACATTTAGGGAATGCCAGTGCGTGTCCACCAAGGTATTTGGTGACTTTGTCATAAA</gDNA_template>
            <first_frame> Y  S  S  T  F  I  D  L  V  N  P  K  I  *  G  F  S  T  F  F  F  S  *  A  L  I  S  A  Y  I  S  A  F  L  R  N  L  G  F  F  G  S  R  L  F  D  I  :  I  L  Q  H  G  E  Y  A  E  L  L  A  I  W  R  R  A  S  R  T  I  K  S  L  R  G  S  *  M  V  N  S  C  Y  K  I  I  *  T  D  E  V  Q  R  *  T  *  E  *  P  *  P  F  K  E  L  C  *  N  *  A  Q  G  *  S  Y  V  S  G  R  *  Q  V  G  K  P  *  L  Q  Y  V  K  F  G  K  Q  D  D  *  K  Y  E  Q  E  S  H  Y  G  *  H  F  Q  C  K  S  S  L  S  *  A  Q  F  *  Q  L  G  K  F  I  F  K  Q  V  Q  C  *  Q  L  Y  Q  G  T  *  Q  E  *  Q  *  Q  R  *  E  H  K  W  K  *  L  R  *  Q  K  V  *  D  S  A  C  C  *  N  T  A  E  E  *  G  S  W  W  I  Y  I  C  L  *  Q  *  H  N  A  G  R  P  K  A  P  A  L  W :   P  S  S  *  I  Q  R  F  R  E  G  N  N  T  R  V  A  L  V  P  I  *  L  H  Y  S  P  V  A  W  Y  L  *   : G  I  E  F  W  R  F  Q  H  *  S  N  C  L  G  G  *  K  V  *  R  R  V  K  V  P  C  S   : G  E  D  P  C  P  E  S  L  *  S  F  G  G  R  C  F  Q  T  S  F  T  S  L  *  W  P  Q  V  P  S  G  A  L  H  S  *   : D  F  G  L  T  R  S  L  *  K  S  R  C  V  G  A  M  C  S  C  W  R  P  V  I  V  S  I  K  E  L  *  P  M  *  M  L  *  I  C  G  A  C  Q  Q  C  A  V  R  R  F  S  L  A  *  A  L  G  C  K  S  S  *  E  V  V  S  L  G  L  A  C  I  S  Q  I  S  V  M  L  I  S  E  D  I  C  *  V  A  S  Q  I  *  L  C  N  L  A  V  N  *  K  Q  V  R  Q  L  C  N  G  S  R  S  N  V  F  L  Y  L  Q  R  N  S  A  S  C  D  L  *  G  L  N  S  *  H  F  F  T  F  R  E  C  Q  C  V  S  T  K  V  F  G  D  F  V  I   </first_frame>
            <second_frame>  T  V  L  H  S  *  I  W  *  I  P  K  Y  R  V  S  L  L  F  F  F  R  K  L  *  F  R  P  I  F  L  H  F  C  V  I  S  D  S  S  V  Q  D  C  L  I  L :   Y  C  N  M  E  N  M  Q  S  Y  W  Q  F  G  D  E  L  R  G  Q  S  K  A  S  E  D  H  K  W  S  T  A  A  I  K  L  S  E  Q  M  K  Y  K  G  E  R  R  N  N  L  D  L  S  K  S  S  A  E  I  R  P  R  G  N  H  M  F  Q  E  D  N  K  W  E  S  L  N  F  N  M  L  N  L  E  S  K  M  T  E  N  M  S  K  N  R  I  M  D  S  I  F  N  A  N  P  V  Y  L  K  P  N  F  N  S  L  G  N  S  S  L  S  K  F  N  A  S  N  Y  T  K  E  P  S  K  N  N  N  N  N  V  E  S  T  N  G  N  N  S  V  D  K  R  F  K  T  L  P  A  A  E  T  L  P  K  N  E  V  L  G  G  Y  I  F  V  C  N  N  D  T  M  Q  E  D  L  K  R  L  L  F   : G  L  P  P  R  Y  R  D  S  V  R  A  I  T  P  G  L  P  L  F  L  Y  N  Y  T  T  H  Q  L  H  G  I  F  E  :  A  S  S  F  G  G  S  N  I  D  P  T  A  W  E  D  K  K  C  K  G  E  S  R  F  P  A  Q  :  V  R  I  R  V  R  K  V  C  N  P  L  E  E  D  A  F  R  P  V  L  H  H  Y  D  G  P  K  F  R  L  E  L  S  I  P  E  :  T  L  D  L  L  D  L  C  E  K  A  G  V  *  V  L  C  A  R  A  G  V  L  *  *  *  A  *  K  N  C  S  L  C  E  C  Y  R  F  V  V  H  V  S  S  V  L  S  V  D  F  P  *  R  K  L  W  G  A  S  L  V  K  R  L  *  V  *  D  W  L  V  L  A  K  *  V  *  C  L  S  L  K  I  F  A  E  W  L  H  K  F  S  Y  V  I  L  Q  *  T  R  N  K  *  D  S  Y  V  M  G  Q  D  R  M  C  F  C  I  C  R  G  T  L  L  H  V  I  C  K  V  *  I  L  N  I  S  L  H  L  G  N  A  S  A  C  P  P  R  Y  L  V  T  L  S  *  </second_frame>
            <third_frame>   Q  F  Y  I  H  R  F  G  K  S  Q  N  I  G  F  L  Y  F  F  F  F  V  S  F  N  F  G  L  Y  F  C  I  F  A  *  S  R  I  L  R  F  K  I  V  *  Y   : Y  T  A  T  W  R  I  C  R  A  I  G  N  L  A  T  S  F  E  D  N  Q  K  P  Q  R  I  I  N  G  Q  Q  L  L  *  N  Y  L  N  R  *  S  T  K  V  N  V  G  I  T  L  T  F  Q  R  A  L  L  K  L  G  P  G  V  I  I  C  F  R  K  I  T  S  G  K  A  L  T  S  I  C  *  I  W  K  A  R  *  L  K  I  *  A  R  I  A  L  W  I  A  F  S  M  Q  I  Q  F  I  L  S  P  I  L  T  A  W  E  I  H  L  *  A  S  S  M  L  A  T  I  P  R  N  L  A  R  I  T  I  T  T  L  R  A  Q  M  E  I  T  P  L  T  K  G  L  R  L  C  L  L  L  K  H  C  R  R  M  R  F  L  V  D  I  Y  L  F  V  T  M  T  Q  C  R  K  T  *  S  A  C  S  L  :  A  F  L  L  D  T  E  I  P  *  G  Q  *  H  Q  G  C  P  C  S  Y  I  I  T  L  L  T  S  C  M  V  S  L  R :   H  R  V  L  E  V  P  T  L  I  Q  L  P  G  R  I  K  S  V  K  E  S  Q  G  S  L  L  R :   *  G  S  V  S  G  K  S  V  I  L  W  R  K  M  L  S  D  Q  F  Y  I  I  M  M  A  P  S  S  V  W  S  S  P  F  L  R :   L  W  T  Y  *  I  S  V  K  K  P  V  C  R  C  Y  V  L  V  L  A  S  C  N  S  K  H  K  R  T  V  A  Y  V  N  V  I  D  L  W  C  M  S  A  V  C  C  P  *  I  F  L  S  V  S  F  G  V  Q  V  *  L  R  G  C  K  F  R  I  G  L  Y  *  P  N  K  C  N  A  Y  L  *  R  Y  L  L  S  G  F  T  N  L  A  M  *  S  C  S  K  L  E  T  S  K  T  V  M  *  W  V  K  I  E  C  V  S  V  S  A  E  E  L  C  F  M  *  F  V  R  F  E  F  L  T  F  L  Y  I  *  G  M  P  V  R  V  H  Q  G  I  W  *  L  C  H  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104375" stop="104311"/>
                    <exon start="103742" stop="103174"/>
                    <exon start="102790" stop="102690"/>
                    <exon start="102186" stop="102103"/>
                    <exon start="102015" stop="101905"/>
                    <exon start="101816" stop="101775"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>969</number_coding_nucleotides>
                  <number_encoded_amino_acids>323</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FRPIFLHFCVISDSSVQDCLILYCNMENMQSYWQFGDELRGQSKASEDHKWSTAAIKLSEQMKYKGERRNNLDLSKSSAEIRPRGNHMFQEDNKWESLNFNMLNLESKMTENMSKNRIMDSIFNANPVYLKPNFNSLGNSSLSKFNASNYTKEPSKNNNNNVESTNGNNSVDKRFKTLPAAETLPKNEVLGGYIFVCNNDTMQEDLKRLLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKVCNPLEEDAFRPVLHHYDGPKFRLELSIPETLDLLDLCEKAGV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="107526" PGL_stop="114706"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107526" e_stop="107709"/>
            <exon e_start="107849" e_stop="107927"/>
            <exon e_start="112299" e_stop="112468"/>
            <exon e_start="112553" e_stop="112600"/>
            <exon e_start="113639" e_stop="113728"/>
            <exon e_start="114389" e_stop="114706"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="0.995"/>
          <exon-intron don_prob="0.999" acc_prob="0.794" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.846" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="107526" e_stop="107709" e_length="184"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="107710" i_stop="107848" i_length="139"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107849" e_stop="107927" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.794">
            <gDNA_intron_boundary i_start="107928" i_stop="112298" i_length="4371"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="112299" e_stop="112468" e_length="170"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.971">
            <gDNA_intron_boundary i_start="112469" i_stop="112552" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="112553" e_stop="112600" e_length="48"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="112601" i_stop="113638" i_length="1038"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="113639" e_stop="113728" e_length="90"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.846">
            <gDNA_intron_boundary i_start="113729" i_stop="114388" i_length="660"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="114389" e_stop="114706" e_length="318"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107526" stop="107709"/>
              <exon start="107849" stop="107927"/>
              <exon start="112299" stop="112468"/>
              <exon start="112553" stop="112600"/>
              <exon start="113639" stop="113728"/>
              <exon start="114389" stop="114706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573749" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACGAGGTCTCATCCGCTTCAAGTTGAAATTTAGAACCCTAGTTATCGCAGTAAGTGCAAAGGAACGTCCGTTTCGATACCGTTCATCATGGATATGCAAAGTGATTTCGACCGACTCCTCTTTTTCGAGCACGCTCGCAAGACTGCCGAAACTACATATGCTACAGATCCTCTTGATGCCGAG : AATTTGACAAGATGGGCAGGTGCATTACTGGAATTATCACAATTCCAGTCGGTCAGCGAATCAAAGAAAATGATATCTG : ATGCTATCTCAAAGTTAGAAGAGGCTTTGGAGGTTAATCCACAGAAGCATGACGCCATTTGGTGTTTGGGGAATGCATATACATCCCATGGCTTTCTAAATCCCGACGAAGATGAAGCAAAGATTTTTTTCGACAAAGCAGCCCAGTGCTTCCAGCAGGCTGTTGATGCG : GATCCAGAAAACGAGCTTTATCAGAAATCATTTGAAGTTTCTTCTAAG : ACTTCAGAGTTGCATGCCCAGATTCACAAACAAGGTCCCCTTCAACAAGCCATGGGACCAGGACCATCTACAACAACATCAAGTACAAAG : GGTGCGAAGAAGAAGAGCAGTGATCTGAAGTATGACGTTTTTGGATGGGTAATACTTGCTGTTGGACTTGTTGCATGGATTGGCTTTGCGAAATCTAATATGCCGCCACCTGCACATCCTCTTCCAAGATAAGGGCCAAAATACAATCTTCTAGGCCAAAATACATGATGTAATTTTTTCCTGCATAAAAATGGCTTTTGGCGATTCAAGCTTTTGCCATATAGATAGGATTTACTGATGTAACATAGTTTGAATTAAGACACTCTTTTGTCCTTTGATTGATACTAGTCATAAAACGATTTTATGAAGCTGTTTTAG</gDNA_template>
            <first_frame> D  E  V  S  S  A  S  S  *  N  L  E  P  *  L  S  Q  *  V  Q  R  N  V  R  F  D  T  V  H  H  G  Y  A  K  *  F  R  P  T  P  L  F  R  A  R  S  Q  D  C  R  N  Y  I  C  Y  R  S  S  *  C  R   : E  F  D  K  M  G  R  C  I  T  G  I  I  T  I  P  V  G  Q  R  I  K  E  N  D  I  * :   C  Y  L  K  V  R  R  G  F  G  G  *  S  T  E  A  *  R  H  L  V  F  G  E  C  I  Y  I  P  W  L  S  K  S  R  R  R  *  S  K  D  F  F  R  Q  S  S  P  V  L  P  A  G  C  *  C   : G  S  R  K  R  A  L  S  E  I  I  *  S  F  F  *   : D  F  R  V  A  C  P  D  S  Q  T  R  S  P  S  T  S  H  G  T  R  T  I  Y  N  N  I  K  Y  K   : G  C  E  E  E  E  Q  *  S  E  V  *  R  F  W  M  G  N  T  C  C  W  T  C  C  M  D  W  L  C  E  I  *  Y  A  A  T  C  T  S  S  S  K  I  R  A  K  I  Q  S  S  R  P  K  Y  M  M  *  F  F  P  A  *  K  W  L  L  A  I  Q  A  F  A  I  *  I  G  F  T  D  V  T  *  F  E  L  R  H  S  F  V  L  *  L  I  L  V  I  K  R  F  Y  E  A  V  L  </first_frame>
            <second_frame>  T  R  S  H  P  L  Q  V  E  I  *  N  P  S  Y  R  S  K  C  K  G  T  S  V  S  I  P  F  I  M  D  M  Q  S  D  F  D  R  L  L  F  F  E  H  A  R  K  T  A  E  T  T  Y  A  T  D  P  L  D  A  E  :  N  L  T  R  W  A  G  A  L  L  E  L  S  Q  F  Q  S  V  S  E  S  K  K  M  I  S   : D  A  I  S  K  L  E  E  A  L  E  V  N  P  Q  K  H  D  A  I  W  C  L  G  N  A  Y  T  S  H  G  F  L  N  P  D  E  D  E  A  K  I  F  F  D  K  A  A  Q  C  F  Q  Q  A  V  D  A  :  D  P  E  N  E  L  Y  Q  K  S  F  E  V  S  S  K  :  T  S  E  L  H  A  Q  I  H  K  Q  G  P  L  Q  Q  A  M  G  P  G  P  S  T  T  T  S  S  T  K  :  G  A  K  K  K  S  S  D  L  K  Y  D  V  F  G  W  V  I  L  A  V  G  L  V  A  W  I  G  F  A  K  S  N  M  P  P  P  A  H  P  L  P  R  *  G  P  K  Y  N  L  L  G  Q  N  T  *  C  N  F  F  L  H  K  N  G  F  W  R  F  K  L  L  P  Y  R  *  D  L  L  M  *  H  S  L  N  *  D  T  L  L  S  F  D  *  Y  *  S  *  N  D  F  M  K  L  F  * </second_frame>
            <third_frame>   R  G  L  I  R  F  K  L  K  F  R  T  L  V  I  A  V  S  A  K  E  R  P  F  R  Y  R  S  S  W  I  C  K  V  I  S  T  D  S  S  F  S  S  T  L  A  R  L  P  K  L  H  M  L  Q  I  L  L  M  P  R :   I  *  Q  D  G  Q  V  H  Y  W  N  Y  H  N  S  S  R  S  A  N  Q  R  K  *  Y  L  :  M  L  S  Q  S  *  K  R  L  W  R  L  I  H  R  S  M  T  P  F  G  V  W  G  M  H  I  H  P  M  A  F  *  I  P  T  K  M  K  Q  R  F  F  S  T  K  Q  P  S  A  S  S  R  L  L  M  R :   I  Q  K  T  S  F  I  R  N  H  L  K  F  L  L  R :   L  Q  S  C  M  P  R  F  T  N  K  V  P  F  N  K  P  W  D  Q  D  H  L  Q  Q  H  Q  V  Q  R :   V  R  R  R  R  A  V  I  *  S  M  T  F  L  D  G  *  Y  L  L  L  D  L  L  H  G  L  A  L  R  N  L  I  C  R  H  L  H  I  L  F  Q  D  K  G  Q  N  T  I  F  *  A  K  I  H  D  V  I  F  S  C  I  K  M  A  F  G  D  S  S  F  C  H  I  D  R  I  Y  *  C  N  I  V  *  I  K  T  L  F  C  P  L  I  D  T  S  H  K  T  I  L  *  S  C  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107560" stop="107709"/>
                    <exon start="107849" stop="107927"/>
                    <exon start="112299" stop="112468"/>
                    <exon start="112553" stop="112600"/>
                    <exon start="113639" stop="113728"/>
                    <exon start="114389" stop="114520"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPSYRSKCKGTSVSIPFIMDMQSDFDRLLFFEHARKTAETTYATDPLDAENLTRWAGALLELSQFQSVSESKKMISDAISKLEEALEVNPQKHDAIWCLGNAYTSHGFLNPDEDEAKIFFDKAAQCFQQAVDADPENELYQKSFEVSSKTSELHAQIHKQGPLQQAMGPGPSTTTSSTKGAKKKSSDLKYDVFGWVILAVGLVAWIGFAKSNMPPPAHPLPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="111351" PGL_stop="111115"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111351" e_stop="111115"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="111351" e_stop="111115" e_length="237"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111351" stop="111115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600611" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGGGTAAGACGTGAAGTTCATATGAAATGTTAGGTGGCTTGATTGAGGGAGTAATTCTTGGTTAGACGAATCTATAAAAAAAAAAATATAATGTGTAATTAAAACATTATGAATGAACCATGAAATTTCCCTAAGAATTAATGTTAAACTTGATGAAAAAGTGAAGAAAAATCGTAGAATAAATTTCCAGAACTTGAAAACAGACTTTAAAAGAATCTGGAAATTTTTTGAACATC</gDNA_template>
            <first_frame> W  G  K  T  *  S  S  Y  E  M  L  G  G  L  I  E  G  V  I  L  G  *  T  N  L  *  K  K  K  Y  N  V  *  L  K  H  Y  E  *  T  M  K  F  P  *  E  L  M  L  N  L  M  K  K  *  R  K  I  V  E  *  I  S  R  T  *  K  Q  T  L  K  E  S  G  N  F  L  N  I </first_frame>
            <second_frame>  G  V  R  R  E  V  H  M  K  C  *  V  A  *  L  R  E  *  F  L  V  R  R  I  Y  K  K  K  N  I  M  C  N  *  N  I  M  N  E  P  *  N  F  P  K  N  *  C  *  T  *  *  K  S  E  E  K  S  *  N  K  F  P  E  L  E  N  R  L  *  K  N  L  E  I  F  *  T   </second_frame>
            <third_frame>   G  *  D  V  K  F  I  *  N  V  R  W  L  D  *  G  S  N  S  W  L  D  E  S  I  K  K  K  I  *  C  V  I  K  T  L  *  M  N  H  E  I  S  L  R  I  N  V  K  L  D  E  K  V  K  K  N  R  R  I  N  F  Q  N  L  K  T  D  F  K  R  I  W  K  F  F  E  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="115153" PGL_stop="115440"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115153" e_stop="115440"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="115153" e_stop="115440" e_length="288"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115153" stop="115440"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597674" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATTCTAAAATGACCACATTAGTTTGTTTTACATATTTTAAGCTCAAATAAAAAGTACTCCCAATAAAACCATTTGTGGAATCCAAATTTCGTTTTTAGGGAAACGGCGTCGTGAAATGAATTTCTTAAGTTGCCCAGCAAACTAACCAACCCACTTTCTCCAGTCTTCTGTCAAGATGATTGTAGGTGTGGAAGAGATGTCATTGGAAGCTAAAGCATTGGGACACTCTGGAATTGCCGGAGCAGTGCCTCTCTCATTCCGTCGCTCTTTTTCTTCATTCCCCACT</gDNA_template>
            <first_frame> L  F  *  N  D  H  I  S  L  F  Y  I  F  *  A  Q  I  K  S  T  P  N  K  T  I  C  G  I  Q  I  S  F  L  G  K  R  R  R  E  M  N  F  L  S  C  P  A  N  *  P  T  H  F  L  Q  S  S  V  K  M  I  V  G  V  E  E  M  S  L  E  A  K  A  L  G  H  S  G  I  A  G  A  V  P  L  S  F  R  R  S  F  S  S  F  P  T </first_frame>
            <second_frame>  Y  S  K  M  T  T  L  V  C  F  T  Y  F  K  L  K  *  K  V  L  P  I  K  P  F  V  E  S  K  F  R  F  *  G  N  G  V  V  K  *  I  S  *  V  A  Q  Q  T  N  Q  P  T  F  S  S  L  L  S  R  *  L  *  V  W  K  R  C  H  W  K  L  K  H  W  D  T  L  E  L  P  E  Q  C  L  S  H  S  V  A  L  F  L  H  S  P   </second_frame>
            <third_frame>   I  L  K  *  P  H  *  F  V  L  H  I  L  S  S  N  K  K  Y  S  Q  *  N  H  L  W  N  P  N  F  V  F  R  E  T  A  S  *  N  E  F  L  K  L  P  S  K  L  T  N  P  L  S  P  V  F  C  Q  D  D  C  R  C  G  R  D  V  I  G  S  *  S  I  G  T  L  W  N  C  R  S  S  A  S  L  I  P  S  L  F  F  F  I  P  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="115707" PGL_stop="119481"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115707" e_stop="115784"/>
            <exon e_start="116540" e_stop="116593"/>
            <exon e_start="116701" e_stop="116725"/>
            <exon e_start="116903" e_stop="117025"/>
            <exon e_start="117423" e_stop="117589"/>
            <exon e_start="117695" e_stop="117764"/>
            <exon e_start="118099" e_stop="118197"/>
            <exon e_start="119193" e_stop="119481"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="0.974"/>
          <exon-intron don_prob="0.997" acc_prob="0.776" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="0.917" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.518" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="115707" e_stop="115784" e_length="78"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="115785" i_stop="116539" i_length="755"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="116540" e_stop="116593" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.776">
            <gDNA_intron_boundary i_start="116594" i_stop="116700" i_length="107"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="116701" e_stop="116725" e_length="25"/>
          </exon>
          <intron i_serial="3" don_prob="0.927" acc_prob="0.917">
            <gDNA_intron_boundary i_start="116726" i_stop="116902" i_length="177"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="116903" e_stop="117025" e_length="123"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="0.955">
            <gDNA_intron_boundary i_start="117026" i_stop="117422" i_length="397"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="117423" e_stop="117589" e_length="167"/>
          </exon>
          <intron i_serial="5" don_prob="0.518" acc_prob="0.999">
            <gDNA_intron_boundary i_start="117590" i_stop="117694" i_length="105"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="117695" e_stop="117764" e_length="70"/>
          </exon>
          <intron i_serial="6" don_prob="0.979" acc_prob="0.999">
            <gDNA_intron_boundary i_start="117765" i_stop="118098" i_length="334"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="118099" e_stop="118197" e_length="99"/>
          </exon>
          <intron i_serial="7" don_prob="0.972" acc_prob="1.000">
            <gDNA_intron_boundary i_start="118198" i_stop="119192" i_length="995"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="119193" e_stop="119481" e_length="289"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115707" stop="115784"/>
              <exon start="116540" stop="116593"/>
              <exon start="116701" stop="116725"/>
              <exon start="116903" stop="117025"/>
              <exon start="117423" stop="117589"/>
              <exon start="117695" stop="117764"/>
              <exon start="118099" stop="118197"/>
              <exon start="119193" stop="119481"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567068" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCGGATTCTTGGAAGTTGGATCCAGTTGTTGAACTTCTTAAAGGAGGAGCTGTTGGAGTCATTCCCACTGACACTCT : GTATGCAATAGTTTGTGATCTGAGCAGTCATTCAGCCATTGAACGTCTTCGTAG : AATAAAAGAGATAGAACCTTCAAAG : CCCCTAAGTATCATTTGTCGATCTTTCCGCGACATAGATACATATACAACTGGATTTCCCCGTGGTAATGCCCAAGGTCTTACAGACATTTTTCGAGCAGTCAAGCACTGTCTACCTGGTCCT : TACACTTTCATCTTAACTGCTAGCAAACAGCTACCAAAACAATGCACGAGATACGGGTCTGCAACTTCCAAATATGCTTCAAGGAAAAATGTTGGTGTTCGTATACCTGATGATCCTGTCTGTCAAGCAATTCTAGAAAAGTTGGATAGACCTCTAATATCCACAAG : CGTCAAGTCACCAAAGGAGGATGAGTGGATACTGGATCCCGTCATTATTGCTGATGTATATGGTCCAGAG : GGACTTGATTTTGTTGTTGATGCGGGTGTTCGAGTGGCTGATCCGTCTACTGTAGTTGATATGACTGAAAGTGCTCCTAGAATTATACGGCAGGGAAAG : GGTCCTAAGCAGCCTTGGATGATAGCGGAAGATGATGATTCTCCTGTAGATGAATAGAATCCGTTGTTGCCGCTGTTTAAGTAAGAAGTACTGCTTAAAATGTACACTTCCTCAAGCCAGAGCTCTTGTACAGCGCACAGATAAGATGGTGAATCCCTCGCTTGATCTTGAACAGTCTTTTAGTCTTCATTAGTGTAGATTGCTGTAAATACTTAACGTGGTAAATCAAGAATCACATGTAATATTTTGCTTGTGTAAACTTTAAAGCATGTTATGATCACTCTCTCTT</gDNA_template>
            <first_frame> L  G  F  L  E  V  G  S  S  C  *  T  S  *  R  R  S  C  W  S  H  S  H  *  H  S  :  V  C  N  S  L  *  S  E  Q  S  F  S  H  *  T  S  S  *  :  N  K  R  D  R  T  F  K   : A  P  K  Y  H  L  S  I  F  P  R  H  R  Y  I  Y  N  W  I  S  P  W  *  C  P  R  S  Y  R  H  F  S  S  S  Q  A  L  S  T  W  S   : L  H  F  H  L  N  C  *  Q  T  A  T  K  T  M  H  E  I  R  V  C  N  F  Q  I  C  F  K  E  K  C  W  C  S  Y  T  *  *  S  C  L  S  S  N  S  R  K  V  G  *  T  S  N  I  H  K  :  R  Q  V  T  K  G  G  *  V  D  T  G  S  R  H  Y  C  *  C  I  W  S  R   : G  T  *  F  C  C  *  C  G  C  S  S  G  *  S  V  Y  C  S  *  Y  D  *  K  C  S  *  N  Y  T  A  G  K   : G  S  *  A  A  L  D  D  S  G  R  *  *  F  S  C  R  *  I  E  S  V  V  A  A  V  *  V  R  S  T  A  *  N  V  H  F  L  K  P  E  L  L  Y  S  A  Q  I  R  W  *  I  P  R  L  I  L  N  S  L  L  V  F  I  S  V  D  C  C  K  Y  L  T  W  *  I  K  N  H  M  *  Y  F  A  C  V  N  F  K  A  C  Y  D  H  S  L   </first_frame>
            <second_frame>  S  D  S  W  K  L  D  P  V  V  E  L  L  K  G  G  A  V  G  V  I  P  T  D  T  L :   Y  A  I  V  C  D  L  S  S  H  S  A  I  E  R  L  R  R :   I  K  E  I  E  P  S  K  :  P  L  S  I  I  C  R  S  F  R  D  I  D  T  Y  T  T  G  F  P  R  G  N  A  Q  G  L  T  D  I  F  R  A  V  K  H  C  L  P  G  P  :  Y  T  F  I  L  T  A  S  K  Q  L  P  K  Q  C  T  R  Y  G  S  A  T  S  K  Y  A  S  R  K  N  V  G  V  R  I  P  D  D  P  V  C  Q  A  I  L  E  K  L  D  R  P  L  I  S  T  S :   V  K  S  P  K  E  D  E  W  I  L  D  P  V  I  I  A  D  V  Y  G  P  E  :  G  L  D  F  V  V  D  A  G  V  R  V  A  D  P  S  T  V  V  D  M  T  E  S  A  P  R  I  I  R  Q  G  K  :  G  P  K  Q  P  W  M  I  A  E  D  D  D  S  P  V  D  E  *  N  P  L  L  P  L  F  K  *  E  V  L  L  K  M  Y  T  S  S  S  Q  S  S  C  T  A  H  R  *  D  G  E  S  L  A  *  S  *  T  V  F  *  S  S  L  V  *  I  A  V  N  T  *  R  G  K  S  R  I  T  C  N  I  L  L  V  *  T  L  K  H  V  M  I  T  L  S  </second_frame>
            <third_frame>   R  I  L  G  S  W  I  Q  L  L  N  F  L  K  E  E  L  L  E  S  F  P  L  T  L   : C  M  Q  *  F  V  I  *  A  V  I  Q  P  L  N  V  F  V   : E  *  K  R  *  N  L  Q  S :   P  *  V  S  F  V  D  L  S  A  T  *  I  H  I  Q  L  D  F  P  V  V  M  P  K  V  L  Q  T  F  F  E  Q  S  S  T  V  Y  L  V  L :   T  L  S  S  *  L  L  A  N  S  Y  Q  N  N  A  R  D  T  G  L  Q  L  P  N  M  L  Q  G  K  M  L  V  F  V  Y  L  M  I  L  S  V  K  Q  F  *  K  S  W  I  D  L  *  Y  P  Q   : A  S  S  H  Q  R  R  M  S  G  Y  W  I  P  S  L  L  L  M  Y  M  V  Q  R :   D  L  I  L  L  L  M  R  V  F  E  W  L  I  R  L  L  *  L  I  *  L  K  V  L  L  E  L  Y  G  R  E  R :   V  L  S  S  L  G  *  *  R  K  M  M  I  L  L  *  M  N  R  I  R  C  C  R  C  L  S  K  K  Y  C  L  K  C  T  L  P  Q  A  R  A  L  V  Q  R  T  D  K  M  V  N  P  S  L  D  L  E  Q  S  F  S  L  H  *  C  R  L  L  *  I  L  N  V  V  N  Q  E  S  H  V  I  F  C  L  C  K  L  *  S  M  L  *  S  L  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115708" stop="115784"/>
                    <exon start="116540" stop="116593"/>
                    <exon start="116701" stop="116725"/>
                    <exon start="116903" stop="117025"/>
                    <exon start="117423" stop="117589"/>
                    <exon start="117695" stop="117764"/>
                    <exon start="118099" stop="118197"/>
                    <exon start="119193" stop="119249"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>669</number_coding_nucleotides>
                  <number_encoded_amino_acids>223</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDSWKLDPVVELLKGGAVGVIPTDTLYAIVCDLSSHSAIERLRRIKEIEPSKPLSIICRSFRDIDTYTTGFPRGNAQGLTDIFRAVKHCLPGPYTFILTASKQLPKQCTRYGSATSKYASRKNVGVRIPDDPVCQAILEKLDRPLISTSVKSPKEDEWILDPVIIADVYGPEGLDFVVDAGVRVADPSTVVDMTESAPRIIRQGKGPKQPWMIAEDDDSPVDE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="120312" PGL_stop="121403"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120312" e_stop="121403"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="120312" e_stop="121403" e_length="1092"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120312" stop="121403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586318" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCATCTCTTCTCACTAAACCCTAGAATTTCTTATCCAAAACAAAATATGCCTCTTATCCCAGAAGAGCCTTTGCTCGCCTCTAACCCAGATCGATTCTGTATGTTCCCAATTCAGTATCCACAGATTTGGGAAATGTACAAGAAAGCCATGGCATCTTTCTGGACGGCAGAAGAAGTCGATCTCTCCACCGATACTCGTCACTGGGAAAACCTAACATCCGGTGAAAGGCATTTCATCACTCATGTTCTTGCCTTTTTTGCCGCCTCAGACGGCATCGTTTTAGAGAACCTCGCTGGAAGGTTCATGAAAGATGTCCAGGTTGCCGAGGCTCGTGCTTTCTATGGGTTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGAGTCGTACATCAAGGATTCTGACGAAAAGAGCAAATTGTTCCGTGCAATTGAGACAATCCCTTGTGTTGAAAAGAAGGCGAAATGGGCCCTTCGTTGGATCGATGGGTCCGAAACTTTCGCGGAGCGTTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTCTGTTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAGTTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTACAGTTTGCTAAGGACGAAGCTAACTGAGGAGCGAGTCAGGGGAATTGTTGCAGATGCTGTGGAGATAGAAAGGGAGTTCGTGTGTGATGCTCTTCCTTGTGCTCTGGTGGGAATGAATGGAGATTTGATGAGTAAATACATAGAGTTTGTAGCTGACAGATTGTTGGATGCTTTGGGTTATGACAAGATGTACAATGCTCAGAATCCATTCGATTGGATGGAGCTGATTAGTTTACAAGGGAAGACTAATTTCTTTGAGAAGAGAGTTGGGGAGTATCAGAAAGCCTCAGTTATGTCCAGTTTGAATGGTAATGGTGATACCCATGAATTCAAGCTGGATGAGGACTTTTAAATTTAGTACTCTAGCTCCTTTTTTGTATTTTTTGAAATTAGTTTTATGTTCTTCTT</gDNA_template>
            <first_frame> P  S  L  L  T  K  P  *  N  F  L  S  K  T  K  Y  A  S  Y  P  R  R  A  F  A  R  L  *  P  R  S  I  L  Y  V  P  N  S  V  S  T  D  L  G  N  V  Q  E  S  H  G  I  F  L  D  G  R  R  S  R  S  L  H  R  Y  S  S  L  G  K  P  N  I  R  *  K  A  F  H  H  S  C  S  C  L  F  C  R  L  R  R  H  R  F  R  E  P  R  W  K  V  H  E  R  C  P  G  C  R  G  S  C  F  L  W  V  P  N  R  H  *  E  Y  P  F  R  D  V  Q  F  A  V  G  V  V  H  Q  G  F  *  R  K  E  Q  I  V  P  C  N  *  D  N  P  L  C  *  K  E  G  E  M  G  P  S  L  D  R  W  V  R  N  F  R  G  A  F  G  G  F  C  L  C  *  R  D  F  L  Q  R  K  L  L  F  D  I  L  V  E  K  T  G  V  N  A  W  I  N  L  L  K  *  V  N  F  K  R  R  R  F  A  L  *  F  C  V  F  A  L  Q  F  A  K  D  E  A  N  *  G  A  S  Q  G  N  C  C  R  C  C  G  D  R  K  G  V  R  V  *  C  S  S  L  C  S  G  G  N  E  W  R  F  D  E  *  I  H  R  V  C  S  *  Q  I  V  G  C  F  G  L  *  Q  D  V  Q  C  S  E  S  I  R  L  D  G  A  D  *  F  T  R  E  D  *  F  L  *  E  E  S  W  G  V  S  E  S  L  S  Y  V  Q  F  E  W  *  W  *  Y  P  *  I  Q  A  G  *  G  L  L  N  L  V  L  *  L  L  F  C  I  F  *  N  *  F  Y  V  L  L </first_frame>
            <second_frame>  H  L  F  S  L  N  P  R  I  S  Y  P  K  Q  N  M  P  L  I  P  E  E  P  L  L  A  S  N  P  D  R  F  C  M  F  P  I  Q  Y  P  Q  I  W  E  M  Y  K  K  A  M  A  S  F  W  T  A  E  E  V  D  L  S  T  D  T  R  H  W  E  N  L  T  S  G  E  R  H  F  I  T  H  V  L  A  F  F  A  A  S  D  G  I  V  L  E  N  L  A  G  R  F  M  K  D  V  Q  V  A  E  A  R  A  F  Y  G  F  Q  I  A  I  E  N  I  H  S  E  M  Y  S  L  L  L  E  S  Y  I  K  D  S  D  E  K  S  K  L  F  R  A  I  E  T  I  P  C  V  E  K  K  A  K  W  A  L  R  W  I  D  G  S  E  T  F  A  E  R  L  V  A  F  A  C  V  E  G  I  F  F  S  G  S  F  C  S  I  F  W  L  K  K  R  G  L  M  P  G  L  T  F  S  N  E  L  I  S  R  D  E  G  L  H  C  D  F  A  C  L  L  Y  S  L  L  R  T  K  L  T  E  E  R  V  R  G  I  V  A  D  A  V  E  I  E  R  E  F  V  C  D  A  L  P  C  A  L  V  G  M  N  G  D  L  M  S  K  Y  I  E  F  V  A  D  R  L  L  D  A  L  G  Y  D  K  M  Y  N  A  Q  N  P  F  D  W  M  E  L  I  S  L  Q  G  K  T  N  F  F  E  K  R  V  G  E  Y  Q  K  A  S  V  M  S  S  L  N  G  N  G  D  T  H  E  F  K  L  D  E  D  F  *  I  *  Y  S  S  S  F  F  V  F  F  E  I  S  F  M  F  F   </second_frame>
            <third_frame>   I  S  S  H  *  T  L  E  F  L  I  Q  N  K  I  C  L  L  S  Q  K  S  L  C  S  P  L  T  Q  I  D  S  V  C  S  Q  F  S  I  H  R  F  G  K  C  T  R  K  P  W  H  L  S  G  R  Q  K  K  S  I  S  P  P  I  L  V  T  G  K  T  *  H  P  V  K  G  I  S  S  L  M  F  L  P  F  L  P  P  Q  T  A  S  F  *  R  T  S  L  E  G  S  *  K  M  S  R  L  P  R  L  V  L  S  M  G  S  K  S  P  L  R  I  S  I  P  R  C  T  V  C  C  W  S  R  T  S  R  I  L  T  K  R  A  N  C  S  V  Q  L  R  Q  S  L  V  L  K  R  R  R  N  G  P  F  V  G  S  M  G  P  K  L  S  R  S  V  W  W  L  L  L  V  L  K  G  F  S  S  A  E  A  S  V  R  Y  F  G  *  K  N  G  G  *  C  L  D  *  P  S  Q  M  S  *  F  Q  E  T  K  V  C  T  V  I  L  R  V  C  F  T  V  C  *  G  R  S  *  L  R  S  E  S  G  E  L  L  Q  M  L  W  R  *  K  G  S  S  C  V  M  L  F  L  V  L  W  W  E  *  M  E  I  *  *  V  N  T  *  S  L  *  L  T  D  C  W  M  L  W  V  M  T  R  C  T  M  L  R  I  H  S  I  G  W  S  *  L  V  Y  K  G  R  L  I  S  L  R  R  E  L  G  S  I  R  K  P  Q  L  C  P  V  *  M  V  M  V  I  P  M  N  S  S  W  M  R  T  F  K  F  S  T  L  A  P  F  L  Y  F  L  K  L  V  L  C  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120313" stop="121347"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1032</number_coding_nucleotides>
                  <number_encoded_amino_acids>344</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HLFSLNPRISYPKQNMPLIPEEPLLASNPDRFCMFPIQYPQIWEMYKKAMASFWTAEEVDLSTDTRHWENLTSGERHFITHVLAFFAASDGIVLENLAGRFMKDVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDEKSKLFRAIETIPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVRGIVADAVEIEREFVCDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKMYNAQNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGDTHEFKLDEDF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="125593" PGL_stop="121919"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125593" e_stop="125330"/>
            <exon e_start="125245" e_stop="125178"/>
            <exon e_start="123943" e_stop="123745"/>
            <exon e_start="122612" e_stop="121919"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="0.992"/>
          <exon-intron don_prob="0.998" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="125593" e_stop="125330" e_length="264"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="125329" i_stop="125246" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="125245" e_stop="125178" e_length="68"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.936">
            <gDNA_intron_boundary i_start="125177" i_stop="123944" i_length="1234"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="123943" e_stop="123745" e_length="199"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.985">
            <gDNA_intron_boundary i_start="123744" i_stop="122613" i_length="1132"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="122612" e_stop="121919" e_length="694"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125593" stop="125330"/>
              <exon start="125245" stop="125178"/>
              <exon start="123943" stop="123745"/>
              <exon start="122612" stop="121919"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583760" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACATAACAAAAGATCACATACTTTGCAAAATCAACTTTACATTATTTTTTATTTTTTAAATTTTAGGACTTTCGAGAAAGGAAAAAACGTCGCAAAACGGCAAAAGCATAGGTAGGGAATGAAATTCAAAATTAATGGCGATGGAGTTTGATAGGCAAATCGAATTAGGGTTTCCGTTCTGGAGCCCAACTCGTCGACGTTTTGGTCCTGATGATCCCTTCTTCGCTTACGGTAACATTCAAAGAGAGCTTCTCGCTAAGCAG : GTTGCATTGGATTTGACTGAAGAAGAGAACCAGTTAGTTCAAAATAGTATCACAGATGACGAAATCAG : CAATCTCTTCTGTCCAATCATTGGTTGTGGTGCACAGATGAAAAATCTGGATGACTTTGAAGACCACTATGTTACACGACATACTGCATCTTGTTCTGTATGCTCTCGAGTTTACCCAACATCACGCCTGCTCAGCATACATGTGTCAGAGGCTCATGATTCCTTTTTTCAGGCAAAAGCTGCTCGAGGCTTTCCCATG : TATGAGTGCCTTGTGGAAGGCTGTGATATCAAGTTGAAAAGCTACAAAAGCAGGCAGCAACATCTTGTTGACAAGCATAAATTTCCAGCATCTTATGAGTTCTTCAGAAAAGCTCGTCCATCAAAAAAACAGAGGCTGAAGCCGCATCATAAACAAGCATCTAATAAGACTCAGGAGAAGTCAAGTGCAATGCAAGTTGAGGAAGAAACAATAGACAATCTCGTTTCAGCGGTATCGAAATTAACCACTTCGGATTCTCCTTCAGCAATCAGCTTTGGCCGCAGTAGGGCTCGTGGATTGTCATTTGTGCCTCGTGCAGTTAATCGGCAGAGAGGACCAGTCACCTCAACCGGTGGAACAAAAAACTAGTGGCATGCCAATGGAATCTTGAAGCATCTGAAAATGTCAGGCTCATGTTAAGAAAGATATGATCTGAAGCTGATTGGCTACAACACAATGTGGTGATGGTTCCAACGTGTTAAACCACTGCTCTTTATGGCATGCTCAAATTTTTTTGGATGTCTTGTCAAAGGTTGTCACACCTCTGGTGGCTGCAATTAAGAGAACTAAGTTTTTCTCCTATCATGCCCAAACATGTCTAATTTTTCTTGTTAATGAATTATAGAAAAGATTGTGGTTTTCATACTAAAGCAATTAGCAGATATCAATCCAATTAGTTGGTTATATCTCATTT</gDNA_template>
            <first_frame> D  I  T  K  D  H  I  L  C  K  I  N  F  T  L  F  F  I  F  *  I  L  G  L  S  R  K  E  K  T  S  Q  N  G  K  S  I  G  R  E  *  N  S  K  L  M  A  M  E  F  D  R  Q  I  E  L  G  F  P  F  W  S  P  T  R  R  R  F  G  P  D  D  P  F  F  A  Y  G  N  I  Q  R  E  L  L  A  K  Q  :  V  A  L  D  L  T  E  E  E  N  Q  L  V  Q  N  S  I  T  D  D  E  I  S :   N  L  F  C  P  I  I  G  C  G  A  Q  M  K  N  L  D  D  F  E  D  H  Y  V  T  R  H  T  A  S  C  S  V  C  S  R  V  Y  P  T  S  R  L  L  S  I  H  V  S  E  A  H  D  S  F  F  Q  A  K  A  A  R  G  F  P  M  :  Y  E  C  L  V  E  G  C  D  I  K  L  K  S  Y  K  S  R  Q  Q  H  L  V  D  K  H  K  F  P  A  S  Y  E  F  F  R  K  A  R  P  S  K  K  Q  R  L  K  P  H  H  K  Q  A  S  N  K  T  Q  E  K  S  S  A  M  Q  V  E  E  E  T  I  D  N  L  V  S  A  V  S  K  L  T  T  S  D  S  P  S  A  I  S  F  G  R  S  R  A  R  G  L  S  F  V  P  R  A  V  N  R  Q  R  G  P  V  T  S  T  G  G  T  K  N  *  W  H  A  N  G  I  L  K  H  L  K  M  S  G  S  C  *  E  R  Y  D  L  K  L  I  G  Y  N  T  M  W  *  W  F  Q  R  V  K  P  L  L  F  M  A  C  S  N  F  F  G  C  L  V  K  G  C  H  T  S  G  G  C  N  *  E  N  *  V  F  L  L  S  C  P  N  M  S  N  F  S  C  *  *  I  I  E  K  I  V  V  F  I  L  K  Q  L  A  D  I  N  P  I  S  W  L  Y  L  I  </first_frame>
            <second_frame>  T  *  Q  K  I  T  Y  F  A  K  S  T  L  H  Y  F  L  F  F  K  F  *  D  F  R  E  R  K  K  R  R  K  T  A  K  A  *  V  G  N  E  I  Q  N  *  W  R  W  S  L  I  G  K  S  N  *  G  F  R  S  G  A  Q  L  V  D  V  L  V  L  M  I  P  S  S  L  T  V  T  F  K  E  S  F  S  L  S  R :   L  H  W  I  *  L  K  K  R  T  S  *  F  K  I  V  S  Q  M  T  K  S   : A  I  S  S  V  Q  S  L  V  V  V  H  R  *  K  I  W  M  T  L  K  T  T  M  L  H  D  I  L  H  L  V  L  Y  A  L  E  F  T  Q  H  H  A  C  S  A  Y  M  C  Q  R  L  M  I  P  F  F  R  Q  K  L  L  E  A  F  P  C :   M  S  A  L  W  K  A  V  I  S  S  *  K  A  T  K  A  G  S  N  I  L  L  T  S  I  N  F  Q  H  L  M  S  S  S  E  K  L  V  H  Q  K  N  R  G  *  S  R  I  I  N  K  H  L  I  R  L  R  R  S  Q  V  Q  C  K  L  R  K  K  Q  *  T  I  S  F  Q  R  Y  R  N  *  P  L  R  I  L  L  Q  Q  S  A  L  A  A  V  G  L  V  D  C  H  L  C  L  V  Q  L  I  G  R  E  D  Q  S  P  Q  P  V  E  Q  K  T  S  G  M  P  M  E  S  *  S  I  *  K  C  Q  A  H  V  K  K  D  M  I  *  S  *  L  A  T  T  Q  C  G  D  G  S  N  V  L  N  H  C  S  L  W  H  A  Q  I  F  L  D  V  L  S  K  V  V  T  P  L  V  A  A  I  K  R  T  K  F  F  S  Y  H  A  Q  T  C  L  I  F  L  V  N  E  L  *  K  R  L  W  F  S  Y  *  S  N  *  Q  I  S  I  Q  L  V  G  Y  I  S  F </second_frame>
            <third_frame>   H  N  K  R  S  H  T  L  Q  N  Q  L  Y  I  I  F  Y  F  L  N  F  R  T  F  E  K  G  K  N  V  A  K  R  Q  K  H  R  *  G  M  K  F  K  I  N  G  D  G  V  *  *  A  N  R  I  R  V  S  V  L  E  P  N  S  S  T  F  W  S  *  *  S  L  L  R  L  R  *  H  S  K  R  A  S  R  *  A   : G  C  I  G  F  D  *  R  R  E  P  V  S  S  K  *  Y  H  R  *  R  N  Q  :  Q  S  L  L  S  N  H  W  L  W  C  T  D  E  K  S  G  *  L  *  R  P  L  C  Y  T  T  Y  C  I  L  F  C  M  L  S  S  L  P  N  I  T  P  A  Q  H  T  C  V  R  G  S  *  F  L  F  S  G  K  S  C  S  R  L  S  H   : V  *  V  P  C  G  R  L  *  Y  Q  V  E  K  L  Q  K  Q  A  A  T  S  C  *  Q  A  *  I  S  S  I  L  *  V  L  Q  K  S  S  S  I  K  K  T  E  A  E  A  A  S  *  T  S  I  *  *  D  S  G  E  V  K  C  N  A  S  *  G  R  N  N  R  Q  S  R  F  S  G  I  E  I  N  H  F  G  F  S  F  S  N  Q  L  W  P  Q  *  G  S  W  I  V  I  C  A  S  C  S  *  S  A  E  R  T  S  H  L  N  R  W  N  K  K  L  V  A  C  Q  W  N  L  E  A  S  E  N  V  R  L  M  L  R  K  I  *  S  E  A  D  W  L  Q  H  N  V  V  M  V  P  T  C  *  T  T  A  L  Y  G  M  L  K  F  F  W  M  S  C  Q  R  L  S  H  L  W  W  L  Q  L  R  E  L  S  F  S  P  I  M  P  K  H  V  *  F  F  L  L  M  N  Y  R  K  D  C  G  F  H  T  K  A  I  S  R  Y  Q  S  N  *  L  V  I  S  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125470" stop="125330"/>
                    <exon start="125245" stop="125178"/>
                    <exon start="123943" stop="123745"/>
                    <exon start="122612" stop="122244"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSKLMAMEFDRQIELGFPFWSPTRRRFGPDDPFFAYGNIQRELLAKQVALDLTEEENQLVQNSITDDEISNLFCPIIGCGAQMKNLDDFEDHYVTRHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKAARGFPMYECLVEGCDIKLKSYKSRQQHLVDKHKFPASYEFFRKARPSKKQRLKPHHKQASNKTQEKSSAMQVEEETIDNLVSAVSKLTTSDSPSAISFGRSRARGLSFVPRAVNRQRGPVTSTGGTKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="127173" PGL_stop="129183"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="127173" e_stop="127805"/>
            <exon e_start="128090" e_stop="128281"/>
            <exon e_start="128388" e_stop="129183"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.996" e_score="0.994"/>
          <exon-intron don_prob="0.091" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="127173" e_stop="127805" e_length="633"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.996">
            <gDNA_intron_boundary i_start="127806" i_stop="128089" i_length="284"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="128090" e_stop="128281" e_length="192"/>
          </exon>
          <intron i_serial="2" don_prob="0.091" acc_prob="0.985">
            <gDNA_intron_boundary i_start="128282" i_stop="128387" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="128388" e_stop="129183" e_length="796"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127173" stop="127805"/>
              <exon start="128090" stop="128281"/>
              <exon start="128388" stop="129183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568927" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATACTTGAGAGACTAAGGCAACGTACATGAAGTATGAAGAGGAAAATAGTCACGTGGAAGTAGTTAATTGGGTAAGCTGCAATATAATAGATGGTGCACCGTCCACCCACCAAGCTCATCAAATAAAAAACAAATTATTCATTACTCAGTGTTCACATCAAACTATATTAATTTATTCGATAAAAACACTCTACTTGGGAAGTTTTTCCACTCATCCAGCTAGTACAACCTTTGGGACTTGGAACAAGTATAACGACCTGTAACAAATCAGTGAAAAAAGTATCAGCCTTCATTTACCTTCCTGATTACTTTTAGTATATATATGTTTATTTATTCTGCTACTACAAGTCATTGGATGGTAGAGGGAGAAAAGTAGAAGAGAGAGAAAAGAAGGATCAATACTTTTCATCGACAAAGTAAAAAATGGAGAGATTGAGGGGCTTGTATGTGTTGATCTTGGCAATCATATTGATCCTCGGCGGAGCTGAAGGGGAGCTAGTAGAGAACTTCTATGGTTTTACTTGTCCTAATGTGGAATTTATAGTTCAGCAAGCTGTGTCTCTAAAGTTCAGCCAGACTTTTGTCACTATTCCAGCGACTTTGCGTCTCTTTTTCCATGATTGCTTTGTTGAG : GGGTGTGACGCGTCTGTTATGATAGCTTCACCAAATGGAGACGCGGAAAAGGATTCCAAGGATAACCTTTCCCTTGCAGGAGATGGCTTTGACACTGTGGTAAAGGCAAAACAAGCAGTAGAGGCTCAGTGCCCTGGAGTAGTATCATGTGCAGATATCTTAGCTATCGCCACTAGAGATGTTGTGGTGCTG : GCAGGAGGCCCTTCATACAATGTAGAATTGGGACGTCGTGATGGGCTCATCTCCCAGGCATCTCGGGTTGCTGGAAAATTGCCAGAACCTGACTTCAATCTCATTCAACTGAACACTATGTTTGCCAGACACAATCTCAGCCAGTTTGACATGATAGCTCTTTCAGGGGCTCACACACTTGGCTTCTCTCATTGTGACCGTTTTGCAAACCGTCTCTACTCATTTACCCCATCCAACCCTGTTGACCCTTCTTTGGATCCAGAATATGCTAAAGAACTTAAGGATATGTGCCCTCAAAATGTAGATCCAACTATCGCTATAAACATGGACCCTGCAACTCCACGAACCTTTGACAATGAGTATTACAAGAATCTGGTTAAAGGAAAGGGTTTGTTCACCTCAGATCAGGTGCTCTTCACTGATGAATCTTCTCAAGGCACTGTTAGTGATTTTGCTAATAATGCTTTCGACTTCAATGGAGCTTTTGTCACTGCAATGAGAAAACTCGGAAGGGTTGGGGTCAAAACTGGTGGCCAAGGTGAAATAAGACTGGACTGCACCAGGTTTAACTCATGAGGTCCATGTTCTACCTTCAACAAAAGGAAAAAAGATGCTATTTTGTAAATCCCTGTTACAATAGTTTATTTTTGTTTTTGGCAATATTTGATGTAATTGGCTTAAATAAATCACGTGTATAAGGTCTAGAGCTTGGATTTCTTTCGAATTTTGCGATCATTCTTGTATTGGACACTTGCATGAATCCAATCCCTGTGTTACTGAATTCAGTTTTGACTTC</gDNA_template>
            <first_frame> I  L  E  R  L  R  Q  R  T  *  S  M  K  R  K  I  V  T  W  K  *  L  I  G  *  A  A  I  *  *  M  V  H  R  P  P  T  K  L  I  K  *  K  T  N  Y  S  L  L  S  V  H  I  K  L  Y  *  F  I  R  *  K  H  S  T  W  E  V  F  P  L  I  Q  L  V  Q  P  L  G  L  G  T  S  I  T  T  C  N  K  S  V  K  K  V  S  A  F  I  Y  L  P  D  Y  F  *  Y  I  Y  V  Y  L  F  C  Y  Y  K  S  L  D  G  R  G  R  K  V  E  E  R  E  K  K  D  Q  Y  F  S  S  T  K  *  K  M  E  R  L  R  G  L  Y  V  L  I  L  A  I  I  L  I  L  G  G  A  E  G  E  L  V  E  N  F  Y  G  F  T  C  P  N  V  E  F  I  V  Q  Q  A  V  S  L  K  F  S  Q  T  F  V  T  I  P  A  T  L  R  L  F  F  H  D  C  F  V  E  :  G  C  D  A  S  V  M  I  A  S  P  N  G  D  A  E  K  D  S  K  D  N  L  S  L  A  G  D  G  F  D  T  V  V  K  A  K  Q  A  V  E  A  Q  C  P  G  V  V  S  C  A  D  I  L  A  I  A  T  R  D  V  V  V  L  :  A  G  G  P  S  Y  N  V  E  L  G  R  R  D  G  L  I  S  Q  A  S  R  V  A  G  K  L  P  E  P  D  F  N  L  I  Q  L  N  T  M  F  A  R  H  N  L  S  Q  F  D  M  I  A  L  S  G  A  H  T  L  G  F  S  H  C  D  R  F  A  N  R  L  Y  S  F  T  P  S  N  P  V  D  P  S  L  D  P  E  Y  A  K  E  L  K  D  M  C  P  Q  N  V  D  P  T  I  A  I  N  M  D  P  A  T  P  R  T  F  D  N  E  Y  Y  K  N  L  V  K  G  K  G  L  F  T  S  D  Q  V  L  F  T  D  E  S  S  Q  G  T  V  S  D  F  A  N  N  A  F  D  F  N  G  A  F  V  T  A  M  R  K  L  G  R  V  G  V  K  T  G  G  Q  G  E  I  R  L  D  C  T  R  F  N  S  *  G  P  C  S  T  F  N  K  R  K  K  D  A  I  L  *  I  P  V  T  I  V  Y  F  C  F  W  Q  Y  L  M  *  L  A  *  I  N  H  V  Y  K  V  *  S  L  D  F  F  R  I  L  R  S  F  L  Y  W  T  L  A  *  I  Q  S  L  C  Y  *  I  Q  F  *  L  </first_frame>
            <second_frame>  Y  L  R  D  *  G  N  V  H  E  V  *  R  G  K  *  S  R  G  S  S  *  L  G  K  L  Q  Y  N  R  W  C  T  V  H  P  P  S  S  S  N  K  K  Q  I  I  H  Y  S  V  F  T  S  N  Y  I  N  L  F  D  K  N  T  L  L  G  K  F  F  H  S  S  S  *  Y  N  L  W  D  L  E  Q  V  *  R  P  V  T  N  Q  *  K  K  Y  Q  P  S  F  T  F  L  I  T  F  S  I  Y  M  F  I  Y  S  A  T  T  S  H  W  M  V  E  G  E  K  *  K  R  E  K  R  R  I  N  T  F  H  R  Q  S  K  K  W  R  D  *  G  A  C  M  C  *  S  W  Q  S  Y  *  S  S  A  E  L  K  G  S  *  *  R  T  S  M  V  L  L  V  L  M  W  N  L  *  F  S  K  L  C  L  *  S  S  A  R  L  L  S  L  F  Q  R  L  C  V  S  F  S  M  I  A  L  L  R :   G  V  T  R  L  L  *  *  L  H  Q  M  E  T  R  K  R  I  P  R  I  T  F  P  L  Q  E  M  A  L  T  L  W  *  R  Q  N  K  Q  *  R  L  S  A  L  E  *  Y  H  V  Q  I  S  *  L  S  P  L  E  M  L  W  C  W :   Q  E  A  L  H  T  M  *  N  W  D  V  V  M  G  S  S  P  R  H  L  G  L  L  E  N  C  Q  N  L  T  S  I  S  F  N  *  T  L  C  L  P  D  T  I  S  A  S  L  T  *  *  L  F  Q  G  L  T  H  L  A  S  L  I  V  T  V  L  Q  T  V  S  T  H  L  P  H  P  T  L  L  T  L  L  W  I  Q  N  M  L  K  N  L  R  I  C  A  L  K  M  *  I  Q  L  S  L  *  T  W  T  L  Q  L  H  E  P  L  T  M  S  I  T  R  I  W  L  K  E  R  V  C  S  P  Q  I  R  C  S  S  L  M  N  L  L  K  A  L  L  V  I  L  L  I  M  L  S  T  S  M  E  L  L  S  L  Q  *  E  N  S  E  G  L  G  S  K  L  V  A  K  V  K  *  D  W  T  A  P  G  L  T  H  E  V  H  V  L  P  S  T  K  G  K  K  M  L  F  C  K  S  L  L  Q  *  F  I  F  V  F  G  N  I  *  C  N  W  L  K  *  I  T  C  I  R  S  R  A  W  I  S  F  E  F  C  D  H  S  C  I  G  H  L  H  E  S  N  P  C  V  T  E  F  S  F  D  F </second_frame>
            <third_frame>   T  *  E  T  K  A  T  Y  M  K  Y  E  E  E  N  S  H  V  E  V  V  N  W  V  S  C  N  I  I  D  G  A  P  S  T  H  Q  A  H  Q  I  K  N  K  L  F  I  T  Q  C  S  H  Q  T  I  L  I  Y  S  I  K  T  L  Y  L  G  S  F  S  T  H  P  A  S  T  T  F  G  T  W  N  K  Y  N  D  L  *  Q  I  S  E  K  S  I  S  L  H  L  P  S  *  L  L  L  V  Y  I  C  L  F  I  L  L  L  Q  V  I  G  W  *  R  E  K  S  R  R  E  R  K  E  G  S  I  L  F  I  D  K  V  K  N  G  E  I  E  G  L  V  C  V  D  L  G  N  H  I  D  P  R  R  S  *  R  G  A  S  R  E  L  L  W  F  Y  L  S  *  C  G  I  Y  S  S  A  S  C  V  S  K  V  Q  P  D  F  C  H  Y  S  S  D  F  A  S  L  F  P  *  L  L  C  *   : G  V  *  R  V  C  Y  D  S  F  T  K  W  R  R  G  K  G  F  Q  G  *  P  F  P  C  R  R  W  L  *  H  C  G  K  G  K  T  S  S  R  G  S  V  P  W  S  S  I  M  C  R  Y  L  S  Y  R  H  *  R  C  C  G  A   : G  R  R  P  F  I  Q  C  R  I  G  T  S  *  W  A  H  L  P  G  I  S  G  C  W  K  I  A  R  T  *  L  Q  S  H  S  T  E  H  Y  V  C  Q  T  Q  S  Q  P  V  *  H  D  S  S  F  R  G  S  H  T  W  L  L  S  L  *  P  F  C  K  P  S  L  L  I  Y  P  I  Q  P  C  *  P  F  F  G  S  R  I  C  *  R  T  *  G  Y  V  P  S  K  C  R  S  N  Y  R  Y  K  H  G  P  C  N  S  T  N  L  *  Q  *  V  L  Q  E  S  G  *  R  K  G  F  V  H  L  R  S  G  A  L  H  *  *  I  F  S  R  H  C  *  *  F  C  *  *  C  F  R  L  Q  W  S  F  C  H  C  N  E  K  T  R  K  G  W  G  Q  N  W  W  P  R  *  N  K  T  G  L  H  Q  V  *  L  M  R  S  M  F  Y  L  Q  Q  K  E  K  R  C  Y  F  V  N  P  C  Y  N  S  L  F  L  F  L  A  I  F  D  V  I  G  L  N  K  S  R  V  *  G  L  E  L  G  F  L  S  N  F  A  I  I  L  V  L  D  T  C  M  N  P  I  P  V  L  L  N  S  V  L  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127593" stop="127805"/>
                    <exon start="128090" stop="128281"/>
                    <exon start="128388" stop="128963"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>978</number_coding_nucleotides>
                  <number_encoded_amino_acids>326</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMERLRGLYVLILAIILILGGAEGELVENFYGFTCPNVEFIVQQAVSLKFSQTFVTIPATLRLFFHDCFVEGCDASVMIASPNGDAEKDSKDNLSLAGDGFDTVVKAKQAVEAQCPGVVSCADILAIATRDVVVLAGGPSYNVELGRRDGLISQASRVAGKLPEPDFNLIQLNTMFARHNLSQFDMIALSGAHTLGFSHCDRFANRLYSFTPSNPVDPSLDPEYAKELKDMCPQNVDPTIAINMDPATPRTFDNEYYKNLVKGKGLFTSDQVLFTDESSQGTVSDFANNAFDFNGAFVTAMRKLGRVGVKTGGQGEIRLDCTRFNS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127181" stop="127435"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETKATYMKYEEENSHVEVVNWVSCNIIDGAPSTHQAHQIKNKLFITQCSHQTILIYSIKTLYLGSFSTHPASTTFGTWNKYNDL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="129537" PGL_stop="129777"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129537" e_stop="129777"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="129537" e_stop="129777" e_length="241"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129537" stop="129777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604650" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGCTTCTAACAGCAAAAAAAAGGCAGCTTCGCCATCTCCATTGTCTTGCTCACATCCTGGAGGAAGTTCTGGTTATGGCTAACAATCACCTCAACGAAATGCTCTTGGATCCATGAGCTGGTTGAGAGTATCTGCGCAAATCACTCAAAACTTCTAACCAAGCTTTCACTTGCCGGATGAATTATGTACGAGATTTTCCGTAAAGACTAGTGTATACAGTCTTTGTTCGGTAAACCAG</gDNA_template>
            <first_frame> K  S  F  *  Q  Q  K  K  G  S  F  A  I  S  I  V  L  L  T  S  W  R  K  F  W  L  W  L  T  I  T  S  T  K  C  S  W  I  H  E  L  V  E  S  I  C  A  N  H  S  K  L  L  T  K  L  S  L  A  G  *  I  M  Y  E  I  F  R  K  D  *  C  I  Q  S  L  F  G  K  P  </first_frame>
            <second_frame>  K  A  S  N  S  K  K  K  A  A  S  P  S  P  L  S  C  S  H  P  G  G  S  S  G  Y  G  *  Q  S  P  Q  R  N  A  L  G  S  M  S  W  L  R  V  S  A  Q  I  T  Q  N  F  *  P  S  F  H  L  P  D  E  L  C  T  R  F  S  V  K  T  S  V  Y  S  L  C  S  V  N  Q </second_frame>
            <third_frame>   K  L  L  T  A  K  K  R  Q  L  R  H  L  H  C  L  A  H  I  L  E  E  V  L  V  M  A  N  N  H  L  N  E  M  L  L  D  P  *  A  G  *  E  Y  L  R  K  S  L  K  T  S  N  Q  A  F  T  C  R  M  N  Y  V  R  D  F  P  *  R  L  V  Y  T  V  F  V  R  *  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204A09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="132463" PGL_stop="130520"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="132463" e_stop="131962"/>
            <exon e_start="131266" e_stop="130520"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.921" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="132463" e_stop="131962" e_length="502"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.921">
            <gDNA_intron_boundary i_start="131961" i_stop="131267" i_length="695"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="131266" e_stop="130520" e_length="747"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132463" stop="131962"/>
              <exon start="131266" stop="131023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588187" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131099" stop="130520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588188" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGTTGTTTACTCATTTATTATTTATTACGTACATACATCACGGAATCAAAATATATAGAGAGTAGTTTTTAATATTCATTACGGATGAAAAGGGACAGACAGGTCCTTTGACTTCCCCCAAGAAAGATTTAGAATCTGAATTCCCAAGGCAATTTTGATCTAACAATGGTTCGTTTGAAAGAGAGATTTAGTTTGTTCTTCAATAACAGATGGCTTGTATTCGTAGCTGCAATGTGGATTCAGAGTTTTGCTGGCATTGGGTATTTATTCGGCAGTATTTCTCCCATCATTAAGAGCTCTTTGAATTACAATCAGAGGCAAGTAGCTAGATTGGGTGTTGCTAAGGACTTGGGCGATAGTGTTGGATTTCTGGCTGGGACTTTATCCGAAATCTTGCCTTTATGGGCTGCTCTTCTTGTGGGTGCTGTTCAGAACTTTATTGGTTATGGCTGGGTTTGGCTCATCGTCACCGGCCGATCTCCTACTCTTCCTTTATGGCTT : ATGTGCTTTCTTATATTTATAGGAACAAATGGAGAAACCTACTTTAATACAGCCGCACTTGTCTCAGGTGTGCAAAATTTCCCTAAAAGCCGTGGCCCTGTGGTGGGAATACTTAAGGGATTTGCTGGGTTGGGTGGTGCAATTATGACTCAAATATATGCACTGATCCATTCCCCTGATCATGCTTCACTTATATTTATGATTGCTGTGGGACCGGCAATGGTGGCTATCGCCCTCATGTTTATAATTAGGCCTGTTGGTGGCCATAGACAAGTCAGACCATCTGATAGTTTCAGTTTTTCATTAATTTACAGCATTTGCCTCATTTTAGCTTCTTACCTGATGGGCGTCATGCTTGTTCAAGACCTCGTTGATGTTAGCCACACAGTCACTACAATCTTCACTGGGATTTTGTTTGTTTTATTGCTTATTCCTGTGGTGATTCCCATCTCATTGACTTTCTCGCAAGAAACTAGAGTACCATCAGAAGAGGCTCTTTTATCTGAGTCACAAAAACAAGATCCTGGAGTATCTGGACATGATCAGGAAATTATATTTAGTGAGGTTGAAGATGAGAAGCCTAAGGATGTAGACTTGCTTCCAGCATTAGAAAGGCAAAAAAGAATTGCCCAACTGCAAGCAAAACTAGCCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTCAAAAGAAGACGGACCCCTCATAGAGGGGAGGACTTTACCCTAATGCAGGCTTTGATAAAGGCAGAC</gDNA_template>
            <first_frame> K  L  F  T  H  L  L  F  I  T  Y  I  H  H  G  I  K  I  Y  R  E  *  F  L  I  F  I  T  D  E  K  G  Q  T  G  P  L  T  S  P  K  K  D  L  E  S  E  F  P  R  Q  F  *  S  N  N  G  S  F  E  R  E  I  *  F  V  L  Q  *  Q  M  A  C  I  R  S  C  N  V  D  S  E  F  C  W  H  W  V  F  I  R  Q  Y  F  S  H  H  *  E  L  F  E  L  Q  S  E  A  S  S  *  I  G  C  C  *  G  L  G  R  *  C  W  I  S  G  W  D  F  I  R  N  L  A  F  M  G  C  S  S  C  G  C  C  S  E  L  Y  W  L  W  L  G  L  A  H  R  H  R  P  I  S  Y  S  S  F  M  A   : Y  V  L  S  Y  I  Y  R  N  K  W  R  N  L  L  *  Y  S  R  T  C  L  R  C  A  K  F  P  *  K  P  W  P  C  G  G  N  T  *  G  I  C  W  V  G  W  C  N  Y  D  S  N  I  C  T  D  P  F  P  *  S  C  F  T  Y  I  Y  D  C  C  G  T  G  N  G  G  Y  R  P  H  V  Y  N  *  A  C  W  W  P  *  T  S  Q  T  I  *  *  F  Q  F  F  I  N  L  Q  H  L  P  H  F  S  F  L  P  D  G  R  H  A  C  S  R  P  R  *  C  *  P  H  S  H  Y  N  L  H  W  D  F  V  C  F  I  A  Y  S  C  G  D  S  H  L  I  D  F  L  A  R  N  *  S  T  I  R  R  G  S  F  I  *  V  T  K  T  R  S  W  S  I  W  T  *  S  G  N  Y  I  *  *  G  *  R  *  E  A  *  G  C  R  L  A  S  S  I  R  K  A  K  K  N  C  P  T  A  S  K  T  S  P  S  S  C  R  R  S  S  E  G  Q  K  K  T  D  P  S  *  R  G  G  L  Y  P  N  A  G  F  D  K  G  R  </first_frame>
            <second_frame>  S  C  L  L  I  Y  Y  L  L  R  T  Y  I  T  E  S  K  Y  I  E  S  S  F  *  Y  S  L  R  M  K  R  D  R  Q  V  L  *  L  P  P  R  K  I  *  N  L  N  S  Q  G  N  F  D  L  T  M  V  R  L  K  E  R  F  S  L  F  F  N  N  R  W  L  V  F  V  A  A  M  W  I  Q  S  F  A  G  I  G  Y  L  F  G  S  I  S  P  I  I  K  S  S  L  N  Y  N  Q  R  Q  V  A  R  L  G  V  A  K  D  L  G  D  S  V  G  F  L  A  G  T  L  S  E  I  L  P  L  W  A  A  L  L  V  G  A  V  Q  N  F  I  G  Y  G  W  V  W  L  I  V  T  G  R  S  P  T  L  P  L  W  L  :  M  C  F  L  I  F  I  G  T  N  G  E  T  Y  F  N  T  A  A  L  V  S  G  V  Q  N  F  P  K  S  R  G  P  V  V  G  I  L  K  G  F  A  G  L  G  G  A  I  M  T  Q  I  Y  A  L  I  H  S  P  D  H  A  S  L  I  F  M  I  A  V  G  P  A  M  V  A  I  A  L  M  F  I  I  R  P  V  G  G  H  R  Q  V  R  P  S  D  S  F  S  F  S  L  I  Y  S  I  C  L  I  L  A  S  Y  L  M  G  V  M  L  V  Q  D  L  V  D  V  S  H  T  V  T  T  I  F  T  G  I  L  F  V  L  L  L  I  P  V  V  I  P  I  S  L  T  F  S  Q  E  T  R  V  P  S  E  E  A  L  L  S  E  S  Q  K  Q  D  P  G  V  S  G  H  D  Q  E  I  I  F  S  E  V  E  D  E  K  P  K  D  V  D  L  L  P  A  L  E  R  Q  K  R  I  A  Q  L  Q  A  K  L  A  Q  A  A  A  E  G  A  V  R  V  K  R  R  R  T  P  H  R  G  E  D  F  T  L  M  Q  A  L  I  K  A  D </second_frame>
            <third_frame>   V  V  Y  S  F  I  I  Y  Y  V  H  T  S  R  N  Q  N  I  *  R  V  V  F  N  I  H  Y  G  *  K  G  T  D  R  S  F  D  F  P  Q  E  R  F  R  I  *  I  P  K  A  I  L  I  *  Q  W  F  V  *  K  R  D  L  V  C  S  S  I  T  D  G  L  Y  S  *  L  Q  C  G  F  R  V  L  L  A  L  G  I  Y  S  A  V  F  L  P  S  L  R  A  L  *  I  T  I  R  G  K  *  L  D  W  V  L  L  R  T  W  A  I  V  L  D  F  W  L  G  L  Y  P  K  S  C  L  Y  G  L  L  F  L  W  V  L  F  R  T  L  L  V  M  A  G  F  G  S  S  S  P  A  D  L  L  L  F  L  Y  G  L :   C  A  F  L  Y  L  *  E  Q  M  E  K  P  T  L  I  Q  P  H  L  S  Q  V  C  K  I  S  L  K  A  V  A  L  W  W  E  Y  L  R  D  L  L  G  W  V  V  Q  L  *  L  K  Y  M  H  *  S  I  P  L  I  M  L  H  L  Y  L  *  L  L  W  D  R  Q  W  W  L  S  P  S  C  L  *  L  G  L  L  V  A  I  D  K  S  D  H  L  I  V  S  V  F  H  *  F  T  A  F  A  S  F  *  L  L  T  *  W  A  S  C  L  F  K  T  S  L  M  L  A  T  Q  S  L  Q  S  S  L  G  F  C  L  F  Y  C  L  F  L  W  *  F  P  S  H  *  L  S  R  K  K  L  E  Y  H  Q  K  R  L  F  Y  L  S  H  K  N  K  I  L  E  Y  L  D  M  I  R  K  L  Y  L  V  R  L  K  M  R  S  L  R  M  *  T  C  F  Q  H  *  K  G  K  K  E  L  P  N  C  K  Q  N  *  P  K  Q  L  Q  K  E  Q  *  G  S  K  E  D  G  P  L  I  E  G  R  T  L  P  *  C  R  L  *  *  R  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204A09.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132330" stop="131962"/>
                    <exon start="131266" stop="130520"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1116</number_coding_nucleotides>
                  <number_encoded_amino_acids>372</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLNSQGNFDLTMVRLKERFSLFFNNRWLVFVAAMWIQSFAGIGYLFGSISPIIKSSLNYNQRQVARLGVAKDLGDSVGFLAGTLSEILPLWAALLVGAVQNFIGYGWVWLIVTGRSPTLPLWLMCFLIFIGTNGETYFNTAALVSGVQNFPKSRGPVVGILKGFAGLGGAIMTQIYALIHSPDHASLIFMIAVGPAMVAIALMFIIRPVGGHRQVRPSDSFSFSLIYSICLILASYLMGVMLVQDLVDVSHTVTTIFTGILFVLLLIPVVIPISLTFSQETRVPSEEALLSESQKQDPGVSGHDQEIIFSEVEDEKPKDVDLLPALERQKRIAQLQAKLAQAAAEGAVRVKRRRTPHRGEDFTLMQALIKAD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 60 chains have been computed
$ 
$ memory statistics:
$ 65664 bytes spliced alignments in total
$ 30 spliced alignments have been stored
$ 2188 bytes was the average size of a spliced alignment
$ 31800 bytes predicted gene locations in total
$ 21 predicted gene locations have been stored
$ 1514 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 63 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:06:17
-->
