<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2006-11-03 16:42:02"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E265216" ref_strand="+" ref_description="SGN-E265216 	[cLEI-2-B12]">
      <seq>gagaaggtattcaagatgtttaatagccaccagcacttgctcgatatatcgtcctcagctcaacgaacacctgataacgagttggatttcattcgtgatgaagagtttgatagcaactctggtgctgataacatggaagctcccaattcaggtgatgacgatcaagctgatccaaaccaacctccaaacaagaagaagcgttatcatcgccacactcagaatcagattcaggaaatggagtccttttacaaggaatgcaatcatccagatgacaagcaaaggaaggaattgggaagaagacttggtttggagccattacaagtgaaattttggttccagaacaagcgtactcagatgaaggctcaacatgagcgatgtgagaacacacagttgaggaatgaaaatgagaagcttcgcgctgagaacataaggtacaaagaagctttgagtaatgcagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="4047" stop="5351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4347" g_stop="4588" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4589" i_stop="4673" i_length="85">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4674" g_stop="4791" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="360" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4792" i_stop="4952" i_length="161">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4953" g_stop="5051" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="459" r_length="99" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E265216" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4347" e_stop="4588"/>
          <exon e_start="4674" e_stop="4791"/>
          <exon e_start="4953" e_stop="5051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGGTATTCAAGATGTTTAATAACCACCAGCACTTGCTCGATATATCGTCCTCAGCTCAACGAACACCTGATAACGAGTTGGATTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAACATGGAAGCTCCCAATTCAGGTGATGACGATCAAGCTGATCCAAACCAACCTCCAAACAAGAAGAAGCGTTATCATCGCCACACTCAGAATCAGATTCAGGAAATGGAGTCGTAAGTAATTTAATTTATATATACTGACAGTACATTTATTAACTATATATAACAATTGTTCCGTTTCTTTTTTGTCATTGTACAGCTTTTACAAGGAATGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTTGGTTTGGAGCCATTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACTCAGATGAAGGTGAAAAACTCTTTTTTCTTTTCTTGTCTGTAATGTAAAGTTAATATATTTGATGTAAAAAATTGAGATGAATACATTCATTCAATTTATATAGACAGGATGATTGAGGTACGTGTGCTTGAAAACTTTATAATTAGATTGTGATTTTATTGTTGTTACAGGCTCAACATGAGCGATGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCGCTGAGAACATAAGGTACAAAGAAGCTTTGAGTAATGCAGCA</genome_strand>
        <mrna_strand>GAGAAGGTATTCAAGATGTTTAATAGCCACCAGCACTTGCTCGATATATCGTCCTCAGCTCAACGAACACCTGATAACGAGTTGGATTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAACATGGAAGCTCCCAATTCAGGTGATGACGATCAAGCTGATCCAAACCAACCTCCAAACAAGAAGAAGCGTTATCATCGCCACACTCAGAATCAGATTCAGGAAATGGAGTC.....................................................................................CTTTTACAAGGAATGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTTGGTTTGGAGCCATTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACTCAGATGAAG.................................................................................................................................................................GCTCAACATGAGCGATGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCGCTGAGAACATAAGGTACAAAGAAGCTTTGAGTAATGCAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E371401" ref_strand="-" ref_description="SGN-E371401 	[TUS-27-O17]">
      <seq>ctgtggagcaccgtgccgccgctgctacatcatctgcatcctcagcttctgttgtggctgagtgtgtgcagaacttcatcactgcgatggactctttgaagctgaatatgattgctgtagaccaggtccatccccttttgtcagacctatcatcttcccttaataaacttttaatacttccatctgattttgaggggaagacaaagatgagagagtggctctcaaggctgtcaaaaatgggagctgcagatgagttgacagaacagcaggcccgtcaactccatttcgatcttgaatcatcatacaattctttcatggcggcactgccctctgctggaacttaattgcttatttcagatccatatatcgtaaggggtccagatacgtagctacaatattaggccaaacagctaggaatatgtaatgaagctgctgtctcagtccctagctatttactttcattcaaagttaataactacaagacactggtctggaccacttaccatcaacatgttaactatttgtgttccttttgtgagcagctagaggagaagtagatgatcatcaacagtgaaactaattgtactataaaaagtggggagactatcgattaatgcatttgtactactttgtgttttatgtcattctggtcgtctatttgaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16486" stop="13577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16186" g_stop="15830" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15829" i_stop="14182" i_length="1648">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.910" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14181" g_stop="13872" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="667" r_length="310" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E371401" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371401" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16186" e_stop="15830"/>
          <exon e_start="14181" e_stop="13872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCATTTTATTCAATGAACTCAGCCCCAGACAAGATGCTTATTTGGTTTGCATATCTTTTCTTTTTGTTACATTAATCATATTACAAGGAAATATTGAGCTGTTAGATATGCTTTTGTAAATTTAAGTGGAAATTTTGATGTAAAACTTAGTTCCATGGTATTAAATCAACTCAAGAAATATCACATTTGTTATTTTGGTTATCTTTGGCTTCCCTCATATTTTGAACTTGGGTTAAAGAAGGGTCTGGATTCATAACGATAGTGTCATTGTCTTGCTAATATTCTCAACAAGAGTATTCTAAGAAATTGTTAAATTGAAAGATCTGGTGCTTTCAGTTGATTAGGCAAGCTTTGTGGCAGTTTATTCAAGTCACTCTATGCTTGTGAAATGTGATACAAAAACGTGCTGTCTGATATGTGGTTCAGCTTCCTCAAACTTTAAGCTTTGAAGTATTTTGACAGCAGAATCCGAAATGTCAGTTATCAGCATTAGTATGTGGATAAAACTTTCCTGGTTTATCCTGTATTCTCTTCATCTGCTACTTAGGAGTATTTGCACAACTAGTGTGTGGAATGATGTTAAACTTTTGTCTCGATTTTCAAAGCTTTTGCTAATATATAGTCCCATTGGCAGGACTTCTCCTCCTTCATTATGATGTGATTTACCTCAAAACTTTAATCCATTTCAAGTGTATCTGCATACCAGAAAAGAAGGGATTTTTGCTTCGCGTAATAGTTCAATTTCTGTGTTTGATGAATTGTAACTTGAATATAAAAGAATTTAACTAGAGATTTGAATAATTTGTTTGGGATGGATGCTTTCTCCCTATCTTAGCATTAGTAAATGGATGGGCCGTCCTATCCATCTTATGGTCGTCCATACAGGCTTTGTGTTGGGTATTTGCCCTAATTTCTTAAGTAAATTCGCCATATTTGGCTAGTCTTTTTTTTTTTAGGAAAAAGTTTAGGACTGTATAAATAGGAATTCGTTTCTTCTAACATAGTAGTATTCACAATATAGTTCTTGAGACTTTGAGATTTTTGTTATTGCTTGTGTGAATCTCTTTGTATTCCGAATATTTCTTTGTATATTTTTTATTATTATATTATACAGTGGATTGTTCATTTCCCAAACCACATTAAGTTTGTATCTTATGGTATATTTCTCGTTTGTCTTGTTACTCGTAGTTTCTCCAGGTCTGTTGGTTAGATTTTGCATGACAGCTAATTATTTCGGTTCCAATACTCGGAGCCGTAGGAAACTCATGAAAGTCTGAAACACTTGTTTGAACCTCCAATGATAGGCTTCTGTAGTCCTTTAAAGGCTGGCCAATTATTTTAAATGATCCATACCATTAAACCAGTAAATTAAAGAGCACTTGCAAAGTTTGATTTTACATCAGTTGGTTCTTATCTTTTGATTTAATCTTTTACAAGGTTTTTTTTTCTATAGTATGACTCAGCCCAAGTATTAATTTCACGACCATTAACTGTGAATTGCAGATCCATATATCGTAAGGGGTCCAGATACGTAGCTACAATATTAGGCCAAACAGCTAGGAATATGTAATGAAGCTGCTGTCTCAGTCCCTAGCTATTTACTTTCATTCAAAGTTAATAACTACAAGACACTGGTCTGGACCACTTACCATCAACATGTTAACTATTTGTGTTCCTTTTGTGAGCAGCTAGAGGAGAAGTAGATGATCATCAACAGTGAAACTAATTGTACTATAAAAAGTGGGGAGACTATCGATTAATGCATTTGTACTACTTTGTGTTTTATGTCATTCTGGTCGTCTATTTGATTTGT</genome_strand>
        <mrna_strand>CTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCATATATCGTAAGGGGTCCAGATACGTAGCTACAATATTAGGCCAAACAGCTAGGAATATGTAATGAAGCTGCTGTCTCAGTCCCTAGCTATTTACTTTCATTCAAAGTTAATAACTACAAGACACTGGTCTGGACCACTTACCATCAACATGTTAACTATTTGTGTTCCTTTTGTGAGCAGCTAGAGGAGAAGTAGATGATCATCAACAGTGAAACTAATTGTACTATAAAAAGTGGGGAGACTATCGATTAATGCATTTGTACTACTTTGTGTTTTATGTCATTCTGGTCGTCTATTTGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E273301" ref_strand="-" ref_description="SGN-E273301 	[cLEM-24-J14]">
      <seq>gtgtgtgcagaacttcatcactgcgatggactctttgaagctgaatatgattgctgtagaccaggtccatccccttttgtcagacctatcatcttcccttaataaacttttaatacttccatctgattttgaggggaagacaaagatgagagagtggctctcaaggctgtcaaaaatgggagctgcagatgagttgacagaacagcaggcccgtcaactccatttcgatcttgaatcatcatacaattctttcatggcggcactgccctctgctggaacttaattgcttatttcagatccatatatcgtaaggggtccagatacgtagctacaatattaggccaaacagctaggaatatgtaatgaagctgctgtctcagtccctagctatttactttcattcaaagttaataactacaagacactggtctggaccacttaccatcaacatgttaactatttgtgttccttttgtgagcagctagaggagaagtagatgatcatcaacagtgaaactaattgtactataaaaagtggggagactatcgattaatgcatttgtactactttgtgttccatgtcattctggtcgtctatttgaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16425" stop="13577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16125" g_stop="15830" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15829" i_stop="14182" i_length="1648">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.910" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14181" g_stop="13872" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="606" r_length="310" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E273301" ref_strand="-">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273301" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16125" e_stop="15830"/>
          <exon e_start="14181" e_stop="13872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCATTTTATTCAATGAACTCAGCCCCAGACAAGATGCTTATTTGGTTTGCATATCTTTTCTTTTTGTTACATTAATCATATTACAAGGAAATATTGAGCTGTTAGATATGCTTTTGTAAATTTAAGTGGAAATTTTGATGTAAAACTTAGTTCCATGGTATTAAATCAACTCAAGAAATATCACATTTGTTATTTTGGTTATCTTTGGCTTCCCTCATATTTTGAACTTGGGTTAAAGAAGGGTCTGGATTCATAACGATAGTGTCATTGTCTTGCTAATATTCTCAACAAGAGTATTCTAAGAAATTGTTAAATTGAAAGATCTGGTGCTTTCAGTTGATTAGGCAAGCTTTGTGGCAGTTTATTCAAGTCACTCTATGCTTGTGAAATGTGATACAAAAACGTGCTGTCTGATATGTGGTTCAGCTTCCTCAAACTTTAAGCTTTGAAGTATTTTGACAGCAGAATCCGAAATGTCAGTTATCAGCATTAGTATGTGGATAAAACTTTCCTGGTTTATCCTGTATTCTCTTCATCTGCTACTTAGGAGTATTTGCACAACTAGTGTGTGGAATGATGTTAAACTTTTGTCTCGATTTTCAAAGCTTTTGCTAATATATAGTCCCATTGGCAGGACTTCTCCTCCTTCATTATGATGTGATTTACCTCAAAACTTTAATCCATTTCAAGTGTATCTGCATACCAGAAAAGAAGGGATTTTTGCTTCGCGTAATAGTTCAATTTCTGTGTTTGATGAATTGTAACTTGAATATAAAAGAATTTAACTAGAGATTTGAATAATTTGTTTGGGATGGATGCTTTCTCCCTATCTTAGCATTAGTAAATGGATGGGCCGTCCTATCCATCTTATGGTCGTCCATACAGGCTTTGTGTTGGGTATTTGCCCTAATTTCTTAAGTAAATTCGCCATATTTGGCTAGTCTTTTTTTTTTTAGGAAAAAGTTTAGGACTGTATAAATAGGAATTCGTTTCTTCTAACATAGTAGTATTCACAATATAGTTCTTGAGACTTTGAGATTTTTGTTATTGCTTGTGTGAATCTCTTTGTATTCCGAATATTTCTTTGTATATTTTTTATTATTATATTATACAGTGGATTGTTCATTTCCCAAACCACATTAAGTTTGTATCTTATGGTATATTTCTCGTTTGTCTTGTTACTCGTAGTTTCTCCAGGTCTGTTGGTTAGATTTTGCATGACAGCTAATTATTTCGGTTCCAATACTCGGAGCCGTAGGAAACTCATGAAAGTCTGAAACACTTGTTTGAACCTCCAATGATAGGCTTCTGTAGTCCTTTAAAGGCTGGCCAATTATTTTAAATGATCCATACCATTAAACCAGTAAATTAAAGAGCACTTGCAAAGTTTGATTTTACATCAGTTGGTTCTTATCTTTTGATTTAATCTTTTACAAGGTTTTTTTTTCTATAGTATGACTCAGCCCAAGTATTAATTTCACGACCATTAACTGTGAATTGCAGATCCATATATCGTAAGGGGTCCAGATACGTAGCTACAATATTAGGCCAAACAGCTAGGAATATGTAATGAAGCTGCTGTCTCAGTCCCTAGCTATTTACTTTCATTCAAAGTTAATAACTACAAGACACTGGTCTGGACCACTTACCATCAACATGTTAACTATTTGTGTTCCTTTTGTGAGCAGCTAGAGGAGAAGTAGATGATCATCAACAGTGAAACTAATTGTACTATAAAAAGTGGGGAGACTATCGATTAATGCATTTGTACTACTTTGTGTTTTATGTCATTCTGGTCGTCTATTTGATTTGT</genome_strand>
        <mrna_strand>GTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCATATATCGTAAGGGGTCCAGATACGTAGCTACAATATTAGGCCAAACAGCTAGGAATATGTAATGAAGCTGCTGTCTCAGTCCCTAGCTATTTACTTTCATTCAAAGTTAATAACTACAAGACACTGGTCTGGACCACTTACCATCAACATGTTAACTATTTGTGTTCCTTTTGTGAGCAGCTAGAGGAGAAGTAGATGATCATCAACAGTGAAACTAATTGTACTATAAAAAGTGGGGAGACTATCGATTAATGCATTTGTACTACTTTGTGTTCCATGTCATTCTGGTCGTCTATTTGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E271449" ref_strand="-" ref_description="SGN-E271449 	[cLEM-5-N13]">
      <seq>taatacttccatttgattttgaggggaagacaaagatgagagagtggctctcaaggctgtcaaaaatgggagctgcagatgagttgacagaacagcaggcccgtcaactccatttcgatcttgaatcatcatacaattctttcatggcggcactgccctctgctggaacttaattgcttatttcagatccatatatcgtaaggggtccagatacgtagctacaatattaggccaaacagctaggaatatgtaatgaagctgctgtctcagtccctagctatttactttcattcaaagttaataactacaagacactggtctggaccacttaccatcaacatgttaactatttgtgttccttttgtgagcagctagaggagaagtagatgatcatcaacagtgaaactaattgtactataaaaagtggggagactatcgattaatgcatttgtactactttgtgttctatgtcattctggtcgtctatttgaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16315" stop="13577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16015" g_stop="15830" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15829" i_stop="14182" i_length="1648">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.910" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14181" g_stop="13872" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="496" r_length="310" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E271449" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271449" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16015" e_stop="15830"/>
          <exon e_start="14181" e_stop="13872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCATTTTATTCAATGAACTCAGCCCCAGACAAGATGCTTATTTGGTTTGCATATCTTTTCTTTTTGTTACATTAATCATATTACAAGGAAATATTGAGCTGTTAGATATGCTTTTGTAAATTTAAGTGGAAATTTTGATGTAAAACTTAGTTCCATGGTATTAAATCAACTCAAGAAATATCACATTTGTTATTTTGGTTATCTTTGGCTTCCCTCATATTTTGAACTTGGGTTAAAGAAGGGTCTGGATTCATAACGATAGTGTCATTGTCTTGCTAATATTCTCAACAAGAGTATTCTAAGAAATTGTTAAATTGAAAGATCTGGTGCTTTCAGTTGATTAGGCAAGCTTTGTGGCAGTTTATTCAAGTCACTCTATGCTTGTGAAATGTGATACAAAAACGTGCTGTCTGATATGTGGTTCAGCTTCCTCAAACTTTAAGCTTTGAAGTATTTTGACAGCAGAATCCGAAATGTCAGTTATCAGCATTAGTATGTGGATAAAACTTTCCTGGTTTATCCTGTATTCTCTTCATCTGCTACTTAGGAGTATTTGCACAACTAGTGTGTGGAATGATGTTAAACTTTTGTCTCGATTTTCAAAGCTTTTGCTAATATATAGTCCCATTGGCAGGACTTCTCCTCCTTCATTATGATGTGATTTACCTCAAAACTTTAATCCATTTCAAGTGTATCTGCATACCAGAAAAGAAGGGATTTTTGCTTCGCGTAATAGTTCAATTTCTGTGTTTGATGAATTGTAACTTGAATATAAAAGAATTTAACTAGAGATTTGAATAATTTGTTTGGGATGGATGCTTTCTCCCTATCTTAGCATTAGTAAATGGATGGGCCGTCCTATCCATCTTATGGTCGTCCATACAGGCTTTGTGTTGGGTATTTGCCCTAATTTCTTAAGTAAATTCGCCATATTTGGCTAGTCTTTTTTTTTTTAGGAAAAAGTTTAGGACTGTATAAATAGGAATTCGTTTCTTCTAACATAGTAGTATTCACAATATAGTTCTTGAGACTTTGAGATTTTTGTTATTGCTTGTGTGAATCTCTTTGTATTCCGAATATTTCTTTGTATATTTTTTATTATTATATTATACAGTGGATTGTTCATTTCCCAAACCACATTAAGTTTGTATCTTATGGTATATTTCTCGTTTGTCTTGTTACTCGTAGTTTCTCCAGGTCTGTTGGTTAGATTTTGCATGACAGCTAATTATTTCGGTTCCAATACTCGGAGCCGTAGGAAACTCATGAAAGTCTGAAACACTTGTTTGAACCTCCAATGATAGGCTTCTGTAGTCCTTTAAAGGCTGGCCAATTATTTTAAATGATCCATACCATTAAACCAGTAAATTAAAGAGCACTTGCAAAGTTTGATTTTACATCAGTTGGTTCTTATCTTTTGATTTAATCTTTTACAAGGTTTTTTTTTCTATAGTATGACTCAGCCCAAGTATTAATTTCACGACCATTAACTGTGAATTGCAGATCCATATATCGTAAGGGGTCCAGATACGTAGCTACAATATTAGGCCAAACAGCTAGGAATATGTAATGAAGCTGCTGTCTCAGTCCCTAGCTATTTACTTTCATTCAAAGTTAATAACTACAAGACACTGGTCTGGACCACTTACCATCAACATGTTAACTATTTGTGTTCCTTTTGTGAGCAGCTAGAGGAGAAGTAGATGATCATCAACAGTGAAACTAATTGTACTATAAAAAGTGGGGAGACTATCGATTAATGCATTTGTACTACTTTGTGTTTTATGTCATTCTGGTCGTCTATTTGATTTGT</genome_strand>
        <mrna_strand>TAATACTTCCATTTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCATATATCGTAAGGGGTCCAGATACGTAGCTACAATATTAGGCCAAACAGCTAGGAATATGTAATGAAGCTGCTGTCTCAGTCCCTAGCTATTTACTTTCATTCAAAGTTAATAACTACAAGACACTGGTCTGGACCACTTACCATCAACATGTTAACTATTTGTGTTCCTTTTGTGAGCAGCTAGAGGAGAAGTAGATGATCATCAACAGTGAAACTAATTGTACTATAAAAAGTGGGGAGACTATCGATTAATGCATTTGTACTACTTTGTGTTCTATGTCATTCTGGTCGTCTATTTGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E422274" ref_strand="+" ref_description="SGN-E422274 	[STM-40-O1]">
      <seq>tttcttacattataccaaaataacaaatgctttcctacttgagttaacttaataccgtggaacttagttttacatcaaaatttccacttaaatttacaaaatcatatctaacagctcaatatttccttgtaatatgattaatgtaacaaaagaaaaggcacgcaaaccaaataagcatcttttctggggctgagttcatgttgaataaaatggaaccaccagacataagttccacagattacacgactcttttctgaatctcgtcaatcagcacttcaaccaaataaagcatcatatgtagtataaacttggtagaaaaaaacaagaattcagccacatatgtacagacatatcacctgaaatatgcaattaagttccagcagagggcagtgccgccatgaaagaattgtatgatgattcaagatcgaagtggagttgacgggcttgctgatctgtcaactcatctgcagctcccattattgacagccttgagagccactctctcatctttgtcttcccctcaaatcagatggaagtattaagagtttattaagggaagatgataggtctgacaaaaggggatggacctggtctacagcaatcatattcgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="15181" stop="16389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15483" g_stop="16089" g_length="607"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="614" r_length="603" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E422274" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E422274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15483" e_stop="16089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACCAAAATAACAAATGTGATATTTCTTGAGTTGATTTAATACCATGGAACTAAGTTTTACATCAAAATTTCCACTTAAATTTACAAAAGCATATCTAACAGCTCAATATTTCCTTGTAATATGATTAATGTAACAAAAAGAAAAGATATGCAAACCAAATAAGCATCTTGTCTGGGGCTGAGTTCA--TTGAATAAAATGGAACCACCAGACACAAGTTCCATAAATTACAAGACTCTTTTCTGAATCCTCGTCAATCAGCACTTCGACCAAATAAAGCATCATATGTAGTATAAACTTTGTAGGAAAAAAACAAGAATTCAGCCACATATGTACAAACATATCACCTGAAATAAGCAATTAAGTTCCAGCAGAGGGCAGTGCCGCCATGAAAGAATTGTATGATGATTCAAGATCGAAATGGAGTTGACGGGCCTGCTGTTCTGTCAACTCATCTGCAGCTCCCATTTTTGACAGCCTTGAGAGCCACTCTCTCATCTTTGTCTTCCCCTCAAAATCAGATGGAAGTATTAAAAGTTTATTAAGGGAAGATGATAGGTCTGACAAAAGGGGATGGACCTGGTCTACAGCAATCATATTCAGCTTC</genome_strand>
        <mrna_strand>AT-ACCAAAATAACAAATGCTTTCCTACTTGAGTTAACTTAATACCGTGGAACTTAGTTTTACATCAAAATTTCCACTTAAATTTACAAAATCATATCTAACAGCTCAATATTTCCTTGTAATATGATTAATGTAAC-AAAAGAAAAGGCACGCAAACCAAATAAGCATCTTTTCTGGGGCTGAGTTCATGTTGAATAAAATGGAACCACCAGACATAAGTTCCACAGATTACACGACTCTTTTCTGAAT-CTCGTCAATCAGCACTTCAACCAAATAAAGCATCATATGTAGTATAAACTTGGTA-GAAAAAAACAAGAATTCAGCCACATATGTACAGACATATCACCTGAAATATGCAATTAAGTTCCAGCAGAGGGCAGTGCCGCCATGAAAGAATTGTATGATGATTCAAGATCGAAGTGGAGTTGACGGGCTTGCTGATCTGTCAACTCATCTGCAGCTCCCATTATTGACAGCCTTGAGAGCCACTCTCTCATCTTTGTCTTCCCCTC-AAATCAGATGGAAGTATTAAGAGTTTATTAAGGGAAGATGATAGGTCTGACAAAAGGGGATGGACCTGGTCTACAGCAATCATATTC-GCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E544421" ref_strand="-" ref_description="SGN-E544421 	[TUS-66-L23]">
      <seq>gaagctgaatatgattgctgtagaccaggtccatccccttttgtcagacctatcatcttcccttaataaacttttaatacttccatctgattttgaggggaagacaaagatgagagagtggctctcaaggctgtcaaaaatgggagctgcagatgagttgacagaacagcaggcccgtcaactccatttcgatcttgaatcatcatacaattctttcatggcggcactgccctctgctggaacttaattgcttatttcaggtgatatgtttgtacatatgtggctgaattcttgtttttttcctacaaagtttatactacatatgatgctttatttggtcgaagtgctgattgacgaggattcagaaaagagtcttgtaatttatggaacttgtgtctggtggttccattttattcaatgaactcagccccagacaagatgcttatttggtttgcatatcttttctttttgttacattaatcatattacaaggaaatattgagctgttagatatgcttttgtaaatttaagtggaaattttgatgtaaaacttagttccatggtattaaatcaactcaagaaatatcacatttgttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16389" stop="15193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16089" g_stop="15494" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="597" polyA_stop="607"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E544421" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544421" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16089" e_stop="15494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCATTTTATTCAATGAACTCAGCCCCAGACAAGATGCTTATTTGGTTTGCATATCTTTTCTTTTTGTTACATTAATCATATTACAAGGAAATATTGAGCTGTTAGATATGCTTTTGTAAATTTAAGTGGAAATTTTGATGTAAAACTTAGTTCCATGGTATTAAATCAACTCAAGAAATATCACATTTGTT</genome_strand>
        <mrna_strand>GAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCATTTTATTCAATGAACTCAGCCCCAGACAAGATGCTTATTTGGTTTGCATATCTTTTCTTTTTGTTACATTAATCATATTACAAGGAAATATTGAGCTGTTAGATATGCTTTTGTAAATTTAAGTGGAAATTTTGATGTAAAACTTAGTTCCATGGTATTAAATCAACTCAAGAAATATCACATTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E575429" ref_strand="+" ref_description="SGN-E575429 	[35051]">
      <seq>ctagcattgagcaatttcatgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcctgccactgtggagcaccgtgccgccgctgctacatcatctgcatcctcagcttctgttgtggctgagtgtgtgcagaacttcatcactgccatggactctttgaagctgaatatgattgctgtagaccaggtccatcccctttttcagacctatcatcttcccttaataaacttttaatacttccatctgattttgaggggaagacaaagatgagagagtggctctcaaggctgtcaaaaatgggagctgcagatgagttgacagaacagcaagcccgtcaactccacttcgatcttgaatcatcatacaattctttcatggcggcactgccctctgctggaacttaattgcatatttcaggtgatatgtctgtacatatgtggctgaattcttgtttttttctaccaagtttatactacatatgatgctttatttggttgaagtgctgattgacgagattcagaaaagagtcgtgtaatctgtggaacttatgtctggtggttccatttttattcaacatgaactcagccccagaaaagatgcttatttggttttgcgtgccttttcttttgttacattaatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16570" stop="15307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16270" g_stop="15607" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E575429" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16270" e_stop="15607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCA-TTTTATTC-A-ATGAACTCAGCCCCAGACAAGATGCTTATTTGG-TTTGCATATCTTTTCTTTTTGTTACATTAATCA</genome_strand>
        <mrna_strand>CTAGCATTGAGCAATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCCATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTT-TCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAAGCCCGTCAACTCCACTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCATATTTCAGGTGATATGTCTGTACATATGTGGCTGAATTCTTGTTTTTTT-CTACCAAGTTTATACTACATATGATGCTTTATTTGGTTGAAGTGCTGATTGACGA-GATTCAGAAAAGAGTCGTGTAATCTGTGGAACTTATGTCTGGTGGTTCCATTTTTATTCAACATGAACTCAGCCCCAGAAAAGATGCTTATTTGGTTTTGCGTGCCTTTTC-TTTTGTTACATTAATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E575430" ref_strand="+" ref_description="SGN-E575430 	[35053]">
      <seq>ctagcattgagcaatttcatgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcctgccactgtggagcaccgtgccgccgctgctacatcatctgcatcctcagcttctgttgtggctgagtgtgtgcagaacttcatcactgccatggactctttgaagctgaatatgattgctgtagaccaggtccatcccctttttcagacctatcatcttcccttaataaacttttaatacttccatctgattttgaggggaagacaaagatgagagagtggctctcaaggctgtcaaaaatgggagctgcagatgagttgacagaacagcaagcccgtcaactccacttcgatcttgaatcatcatacaattctttcatggcggcactgccctctgctggaacttaattgcatatttcaggtgatatgtctgtacatatgtggctgaattcttgtttttttctaccaagtttatactacatatgatgctttatttggttgaagtgctgattgacgagattcagaaaaagagtcgtgtaatctgtggaacttatgtctggtggttccatttttattcaacatgaactcagcccagaaaagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16570" stop="15372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16270" g_stop="15649" g_length="622"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="622" r_length="622" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E575430" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16270" e_stop="15649"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAG-AAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCA-TTTTATTC-A-ATGAACTCAGCCCCAGACAAGATG</genome_strand>
        <mrna_strand>CTAGCATTGAGCAATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCCATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTT-TCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAAGCCCGTCAACTCCACTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCATATTTCAGGTGATATGTCTGTACATATGTGGCTGAATTCTTGTTTTTTT-CTACCAAGTTTATACTACATATGATGCTTTATTTGGTTGAAGTGCTGATTGACGA-GATTCAGAAAAAGAGTCGTGTAATCTGTGGAACTTATGTCTGGTGGTTCCATTTTTATTCAACATGAACTCAG-CCCAGAAAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E210513" ref_strand="+" ref_description="SGN-E210513 	[cLEC-35-H3]">
      <seq>ttctttacctgacaaagactagcatctttgcgcgtgtcccatcctcttctccaacctttttgacaaaggtcaaaatattgttgccaactcccatggaggttaaactatggaatgataagcgggaaagaaaaatgtacgaaaactttgcagaactctttgctataataaaggcaaccgaaaagctcgagaaggcttatgttcgtgacatcatttcaccaactgaatatgaagctgaatgccagaagttgattgctcatttcaaaactttatcttccacgttgaaagataccgtacctagcattgagcgatttcatgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcctgccactgtggagcaccgtgccgccgctgctacatcatctgcatcctcagcttctgttgtggctgagtgtgtgcagaacttcatcactgcgatggactctttgaagctgaatatgattgctgtagaccaggtccatccccttttgtcagacctatcatcttcccttaataaacttttaatacttccatctgattttgaggggaagacaaagatgagagagtggctctcaaagctgtcaaaaatgggagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16855" stop="15642"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16564" g_stop="15942" g_length="623"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="623" r_length="623" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E210513" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210513" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16564" e_stop="15942"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTGCAGTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCT</genome_strand>
        <mrna_strand>TTCTTTACCTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAAAAATGTACGAAAACTTTGCAGAACTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAACTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAAGCTGTCAAAAATGGGAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E308054" ref_strand="+" ref_description="SGN-E308054 	[cLEY-14-H19]">
      <seq>gacaatacccctttctctctcttattcttgattacctgcaacactcttcccattattcaaagtcccgtctttcaccttcttctttacctgacaaagactagcatctttgcgcgtgtcccatcctcttctccaacctttttgacaaaggtcaaaatattgttgccaactcccatggaggttaaactatggaatgataagcgggaaagagaaatgtacgaaaactttgcagagctctttgctataataaaggcaaccgaaaagctcgagaaggcttatgttcgtgacatcatttcaccagctgaatatgaagctgaatgccagaagttgattgctcatttcaaaactttatcttccacgttgaaagataccgtacctagcattgagcgatttcatgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcctgccactgtggagcaccgtgccgccgctgctacatcatctgcatcctcagcttctgttgtggctgagtgtgtgcagaacttcatcactgcgatggactctttgaagctgaatatgattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="19498" stop="15771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19198" g_stop="19111" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19110" i_stop="16556" i_length="2555">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.743" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16555" g_stop="16071" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="573" r_length="485" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E308054" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19198" e_stop="19111"/>
          <exon e_start="16555" e_stop="16071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAATACCCCTTTCTCTCTCTTATTCTTGATTACCTGCAACACTCTTCCCATTATTCAAAGTCCCGTCTTTCACCTTCTTCTTTACCGTAAGTCTTTTCTCCTTACTCTTTTTATCTCGTATTTACTCACCAAACTTTATTATTTGTTTCTTCAATTTCTTGAGATATATCTTTCCATGTTGTTAATTTTAGGGTAATTTTTAATATTTTTACTGATCCAATACATATAAACAACAATGGATGTGATTGAATCCGTAGCTAAGGGCTAGATCCGTATCTTTAAGCATGTTTGTTCTAACCAGAGATTTCCAGCTCTATCTCTGTATCATGTTTATGGAGGATTTTAGTATTTAATTAGTAATAATAATATGATCTGTGTAAGAAGGGGCTTTATTTTGTTTGCTCAGATTGCTTTTGAACGATGTTGCTCGGACTCTACAAAATGTCAATGGGTACATGTTGGATCCTTTGAAAATAGTGCTTTTTTGAAGGATAAGATATGGGTGCCGTTGAAGTGTCTGAGCAACATAGGTTTTGATGGATTGTCTTACTCATCCTTACGGCTTACTGCTCTTTTTTTAAATCGGAAGCTCAGATTTTTATTGTTGCATATCCCATTTGGAGGACTATTAGCTCGGGTAATGTATTTTTTCCTTGAAGAAATTTAAGCAGAACCAGATGAAACAAGCATATGAAATATGTATTTTTGAAATGCTGATGTTAAAGATGGATATGTGGAATTGATAAGACAAAATGTATAAAGTAATAATGTAATGCTGAAAGATTGATGAAGATATGTAGAAGGTACAAATTGATCAAGGTGTTCTTATGTTTTACCCATACTCATGGAAAAAATGGAGGAAAAGAGGAGAAAATAGAGCTGAATAGAGAAGTAGACTCATATAGCTGGCCCCAAGTAGTGAGTAAGGTGTGCATTAAGTTGATCTTATTTGTATAACAACATTTATCCATATCTCCTTACATGTGCCTGTTTTTTTTACTTGCATTTGGTTCGTGACATCAGATGTATTTGCTTGTGGTTAGGTTTTCCACTATTTTACTACATTGTTTGATTTATTTCAAAATTTCTATTAGTTTTTCTTCTCTCTGGAACTGATTTATAGGATTGTTCTTTCTGTTGACAGTGTAACATTAGGGTAAGAAGTGAGGATGTACCAAAACAGGAGAGGGGAGAAAGTAAAGGGGTAGAAGTGAGGACAGAAAAAGGAATCAGAGAGAGAGAGAAGAGAAAAATAAGAATGAAATATAGGAACAGAGCTAGATCAATTCAATTCAAACATAGTAAGAAAAGGTTATATTTATTGTGTTTTGAACTTCCCAGATCTCACTTACACTGGGTATGTTGTTGTTTGTTGTCTGATGAACTTTTGATAAGTTGGAATTCCCAATGCATTTAAAACTTATCTCTGAAGTCTAATAAGAAGATAATTATAATGTCAGTAGACCAGACTTAAATCTAACCAATTAAGAGAACACAATGGTAAAGGGTACACACTAATCTAAAAAATAGCTAAGCATAATCTCACAGCTAAATGATGAATATTAGTTGGAGAAAGGTCTTTATCTACAATCAGAGATAGAGTTTCAATTGTTTCAGTAGATTTGACCTTTTCAGGACTCCGTACGATATATAAGGCAGTTTTATTTTGTTTAGCTGAAATGAATTTGATATAAGGCTCAAACATGACAGGGGGAATTTTTTTGTTAGTTACTTGTATATGTATACCTTTTCACGATGTTGGACTGTTATTGTTACATTTTCCTCCTTTCACTCTGTTTGTAAAGGATTTAATACTCTTAAACCTTGTGTTGTATTCGGAGGTAAGGCCCAGCCCCCCTTCTTGTATTTGTCTATTGATGTATACACCCCAGATAGCCAGGGATGAAATTATAAAAAATAAATAATCTGACACAGCAATTTGTCTCTACTCATTCCCTTCTTTCGCCCCCCTTCTCCATCTTTCATTTCTCGCTAACTCTCCAATCTTATTTTTGATGAAGACTTATTTTTCTGTCTTCCTCTCGTAGTCTTCTTTCTTTATTTATTTCTCATTTTTTTTCCTGGTTTCAACTTCCTTTCTGTCTTCCTCTTCTGATAAACTGAGATAATTCCATGTAGTTTTAACTCCTGTATTTTCACTTGAGATGCTTTCTGCATGTTAATCAAACTTGACCTCTTGAGGGAACTTTGGGACTAGAAACTATCGGAGAGAAATATAATATCTATTGCTGGGGACGTATTGTCTGTCACCCATTTCTGGGATGGTAACTGTATTTGTCATTATTCGGAATACTGGGATCCCAAATAAATTTGTCTAGGATGTCTATTGAACTGGTCCTTTTCACCTCGCAATGGTGATCTTTTTTTCATTTAGTTTAGTAGACTGACAAATTTATTTTAAGCTATCATATCTGAGGGAAATTCTATATGTGCTGTTCTTTGAAGTTTGAACTTTTGTGCACTTTTCAATTAAATGAATCTACACTATATCCAATTGGTAAATTCTATTTCCAAATATCTGTATGGAGGTTAGCGCCTACAAGTCTGATCACTGTAATTAAAAGATATTTGTTAGTTGTAGATTGGCATATTGTAACAGTAGGGCATAATGTTCTTGCAGTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCT</genome_strand>
        <mrna_strand>GACAATACCCCTTTCTCTCTCTTATTCTTGATTACCTGCAACACTCTTCCCATTATTCAAAGTCCCGTCTTTCACCTTCTTCTTTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E202048" ref_strand="+" ref_description="SGN-E202048 	[cLEC-7-B10]">
      <seq>tttcaccttcttctttacctgacaaagactagcatctttgcgcgtgtcccatcctcttctccaacctttttgacaaaggtcaaaatattgttgccaactcccatggaggttaaactatggaatgataagcgggaaagagaaatgtacgaaaactttgcagagctctttgctataataaaggcaaccgaaaagctcgagaaggcttatgttcgtgacatcatttcaccagctgaatatgaagctgaatgccagaagttgattgctcatttcaaaactttatcttccacgttgaaagataccgtacctagcattgagcgatttcatgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcctgccactgtggagcaccgtgccgccgctgctacatcatctgcatcctcagcttctgttgtggctgagtgtgtgcagaacttcatcactgcgatggactctttgaagctgaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="19429" stop="15777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19129" g_stop="19111" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19110" i_stop="16556" i_length="2555">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.743" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16555" g_stop="16077" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="498" r_length="479" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E202048" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202048" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19129" e_stop="19111"/>
          <exon e_start="16555" e_stop="16077"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACCTTCTTCTTTACCGTAAGTCTTTTCTCCTTACTCTTTTTATCTCGTATTTACTCACCAAACTTTATTATTTGTTTCTTCAATTTCTTGAGATATATCTTTCCATGTTGTTAATTTTAGGGTAATTTTTAATATTTTTACTGATCCAATACATATAAACAACAATGGATGTGATTGAATCCGTAGCTAAGGGCTAGATCCGTATCTTTAAGCATGTTTGTTCTAACCAGAGATTTCCAGCTCTATCTCTGTATCATGTTTATGGAGGATTTTAGTATTTAATTAGTAATAATAATATGATCTGTGTAAGAAGGGGCTTTATTTTGTTTGCTCAGATTGCTTTTGAACGATGTTGCTCGGACTCTACAAAATGTCAATGGGTACATGTTGGATCCTTTGAAAATAGTGCTTTTTTGAAGGATAAGATATGGGTGCCGTTGAAGTGTCTGAGCAACATAGGTTTTGATGGATTGTCTTACTCATCCTTACGGCTTACTGCTCTTTTTTTAAATCGGAAGCTCAGATTTTTATTGTTGCATATCCCATTTGGAGGACTATTAGCTCGGGTAATGTATTTTTTCCTTGAAGAAATTTAAGCAGAACCAGATGAAACAAGCATATGAAATATGTATTTTTGAAATGCTGATGTTAAAGATGGATATGTGGAATTGATAAGACAAAATGTATAAAGTAATAATGTAATGCTGAAAGATTGATGAAGATATGTAGAAGGTACAAATTGATCAAGGTGTTCTTATGTTTTACCCATACTCATGGAAAAAATGGAGGAAAAGAGGAGAAAATAGAGCTGAATAGAGAAGTAGACTCATATAGCTGGCCCCAAGTAGTGAGTAAGGTGTGCATTAAGTTGATCTTATTTGTATAACAACATTTATCCATATCTCCTTACATGTGCCTGTTTTTTTTACTTGCATTTGGTTCGTGACATCAGATGTATTTGCTTGTGGTTAGGTTTTCCACTATTTTACTACATTGTTTGATTTATTTCAAAATTTCTATTAGTTTTTCTTCTCTCTGGAACTGATTTATAGGATTGTTCTTTCTGTTGACAGTGTAACATTAGGGTAAGAAGTGAGGATGTACCAAAACAGGAGAGGGGAGAAAGTAAAGGGGTAGAAGTGAGGACAGAAAAAGGAATCAGAGAGAGAGAGAAGAGAAAAATAAGAATGAAATATAGGAACAGAGCTAGATCAATTCAATTCAAACATAGTAAGAAAAGGTTATATTTATTGTGTTTTGAACTTCCCAGATCTCACTTACACTGGGTATGTTGTTGTTTGTTGTCTGATGAACTTTTGATAAGTTGGAATTCCCAATGCATTTAAAACTTATCTCTGAAGTCTAATAAGAAGATAATTATAATGTCAGTAGACCAGACTTAAATCTAACCAATTAAGAGAACACAATGGTAAAGGGTACACACTAATCTAAAAAATAGCTAAGCATAATCTCACAGCTAAATGATGAATATTAGTTGGAGAAAGGTCTTTATCTACAATCAGAGATAGAGTTTCAATTGTTTCAGTAGATTTGACCTTTTCAGGACTCCGTACGATATATAAGGCAGTTTTATTTTGTTTAGCTGAAATGAATTTGATATAAGGCTCAAACATGACAGGGGGAATTTTTTTGTTAGTTACTTGTATATGTATACCTTTTCACGATGTTGGACTGTTATTGTTACATTTTCCTCCTTTCACTCTGTTTGTAAAGGATTTAATACTCTTAAACCTTGTGTTGTATTCGGAGGTAAGGCCCAGCCCCCCTTCTTGTATTTGTCTATTGATGTATACACCCCAGATAGCCAGGGATGAAATTATAAAAAATAAATAATCTGACACAGCAATTTGTCTCTACTCATTCCCTTCTTTCGCCCCCCTTCTCCATCTTTCATTTCTCGCTAACTCTCCAATCTTATTTTTGATGAAGACTTATTTTTCTGTCTTCCTCTCGTAGTCTTCTTTCTTTATTTATTTCTCATTTTTTTTCCTGGTTTCAACTTCCTTTCTGTCTTCCTCTTCTGATAAACTGAGATAATTCCATGTAGTTTTAACTCCTGTATTTTCACTTGAGATGCTTTCTGCATGTTAATCAAACTTGACCTCTTGAGGGAACTTTGGGACTAGAAACTATCGGAGAGAAATATAATATCTATTGCTGGGGACGTATTGTCTGTCACCCATTTCTGGGATGGTAACTGTATTTGTCATTATTCGGAATACTGGGATCCCAAATAAATTTGTCTAGGATGTCTATTGAACTGGTCCTTTTCACCTCGCAATGGTGATCTTTTTTTCATTTAGTTTAGTAGACTGACAAATTTATTTTAAGCTATCATATCTGAGGGAAATTCTATATGTGCTGTTCTTTGAAGTTTGAACTTTTGTGCACTTTTCAATTAAATGAATCTACACTATATCCAATTGGTAAATTCTATTTCCAAATATCTGTATGGAGGTTAGCGCCTACAAGTCTGATCACTGTAATTAAAAGATATTTGTTAGTTGTAGATTGGCATATTGTAACAGTAGGGCATAATGTTCTTGCAGTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATG</genome_strand>
        <mrna_strand>TTTCACCTTCTTCTTTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E464868" ref_strand="+" ref_description="SGN-E464868 	[cPRO-19-I2]">
      <seq>agcatctttgcgcgtgtcccatcctcttctccaacctttttgacaaaggtcaaaatcttgttgccaactcccatggaggttaagctatggaatgataagcgggaaagagaaatgtatgagaactttgcagagctctttgctataataaaggcaacggaaaagctcgagaaggcgtatgttcgcgacatcatttcaccagctgaatatgaagctgaatgccagaagttgattgctcatttcaaaaccttatcttccacattgaaagataccgtacctagcattgagcaatttcatgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcctgccactgtggagcaccgtgccgccgctgctacatcatctgcatcctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="16844" stop="15844"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16544" g_stop="16144" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E464868" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16544" e_stop="16144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTC</genome_strand>
        <mrna_strand>AGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATCTTGTTGCCAACTCCCATGGAGGTTAAGCTATGGAATGATAAGCGGGAAAGAGAAATGTATGAGAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACGGAAAAGCTCGAGAAGGCGTATGTTCGCGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACCTTATCTTCCACATTGAAAGATACCGTACCTAGCATTGAGCAATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E308045" ref_strand="+" ref_description="SGN-E308045 	[cLEY-14-B19]">
      <seq>ttctctctcttattcttgattgggtgcggttctctttccattattcaaagtcccgtctttcaccttcttctttacctgacaaagactagcatctttgcgcgtgtcccatccttttctccaacctttttgacaaaggtcaaaatattgttgccaactcccatggaggttaaactatggaatgataagcgggaaagagaaatgtacgaaaactttgcagagctctttgctataataaaggcaaccgaaaagctcgagaaggcttatgttcgtgacatcatttcaccagctgaatatgaagctgaatgccagaagttgattgctcatttcaaaactttatctttcacgttgaaagataccgttcctagcattgagcgattttctgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcctgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="19486" stop="15888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19186" g_stop="19111" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19110" i_stop="16556" i_length="2555">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.743" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16555" g_stop="16188" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="444" r_length="368" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E308045" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19186" e_stop="19111"/>
          <exon e_start="16555" e_stop="16188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTCTTATTCTTGATTACCTGCAACACTCTTCCCATTATTCAAAGTCCCGTCTTTCACCTTCTTCTTTACCGTAAGTCTTTTCTCCTTACTCTTTTTATCTCGTATTTACTCACCAAACTTTATTATTTGTTTCTTCAATTTCTTGAGATATATCTTTCCATGTTGTTAATTTTAGGGTAATTTTTAATATTTTTACTGATCCAATACATATAAACAACAATGGATGTGATTGAATCCGTAGCTAAGGGCTAGATCCGTATCTTTAAGCATGTTTGTTCTAACCAGAGATTTCCAGCTCTATCTCTGTATCATGTTTATGGAGGATTTTAGTATTTAATTAGTAATAATAATATGATCTGTGTAAGAAGGGGCTTTATTTTGTTTGCTCAGATTGCTTTTGAACGATGTTGCTCGGACTCTACAAAATGTCAATGGGTACATGTTGGATCCTTTGAAAATAGTGCTTTTTTGAAGGATAAGATATGGGTGCCGTTGAAGTGTCTGAGCAACATAGGTTTTGATGGATTGTCTTACTCATCCTTACGGCTTACTGCTCTTTTTTTAAATCGGAAGCTCAGATTTTTATTGTTGCATATCCCATTTGGAGGACTATTAGCTCGGGTAATGTATTTTTTCCTTGAAGAAATTTAAGCAGAACCAGATGAAACAAGCATATGAAATATGTATTTTTGAAATGCTGATGTTAAAGATGGATATGTGGAATTGATAAGACAAAATGTATAAAGTAATAATGTAATGCTGAAAGATTGATGAAGATATGTAGAAGGTACAAATTGATCAAGGTGTTCTTATGTTTTACCCATACTCATGGAAAAAATGGAGGAAAAGAGGAGAAAATAGAGCTGAATAGAGAAGTAGACTCATATAGCTGGCCCCAAGTAGTGAGTAAGGTGTGCATTAAGTTGATCTTATTTGTATAACAACATTTATCCATATCTCCTTACATGTGCCTGTTTTTTTTACTTGCATTTGGTTCGTGACATCAGATGTATTTGCTTGTGGTTAGGTTTTCCACTATTTTACTACATTGTTTGATTTATTTCAAAATTTCTATTAGTTTTTCTTCTCTCTGGAACTGATTTATAGGATTGTTCTTTCTGTTGACAGTGTAACATTAGGGTAAGAAGTGAGGATGTACCAAAACAGGAGAGGGGAGAAAGTAAAGGGGTAGAAGTGAGGACAGAAAAAGGAATCAGAGAGAGAGAGAAGAGAAAAATAAGAATGAAATATAGGAACAGAGCTAGATCAATTCAATTCAAACATAGTAAGAAAAGGTTATATTTATTGTGTTTTGAACTTCCCAGATCTCACTTACACTGGGTATGTTGTTGTTTGTTGTCTGATGAACTTTTGATAAGTTGGAATTCCCAATGCATTTAAAACTTATCTCTGAAGTCTAATAAGAAGATAATTATAATGTCAGTAGACCAGACTTAAATCTAACCAATTAAGAGAACACAATGGTAAAGGGTACACACTAATCTAAAAAATAGCTAAGCATAATCTCACAGCTAAATGATGAATATTAGTTGGAGAAAGGTCTTTATCTACAATCAGAGATAGAGTTTCAATTGTTTCAGTAGATTTGACCTTTTCAGGACTCCGTACGATATATAAGGCAGTTTTATTTTGTTTAGCTGAAATGAATTTGATATAAGGCTCAAACATGACAGGGGGAATTTTTTTGTTAGTTACTTGTATATGTATACCTTTTCACGATGTTGGACTGTTATTGTTACATTTTCCTCCTTTCACTCTGTTTGTAAAGGATTTAATACTCTTAAACCTTGTGTTGTATTCGGAGGTAAGGCCCAGCCCCCCTTCTTGTATTTGTCTATTGATGTATACACCCCAGATAGCCAGGGATGAAATTATAAAAAATAAATAATCTGACACAGCAATTTGTCTCTACTCATTCCCTTCTTTCGCCCCCCTTCTCCATCTTTCATTTCTCGCTAACTCTCCAATCTTATTTTTGATGAAGACTTATTTTTCTGTCTTCCTCTCGTAGTCTTCTTTCTTTATTTATTTCTCATTTTTTTTCCTGGTTTCAACTTCCTTTCTGTCTTCCTCTTCTGATAAACTGAGATAATTCCATGTAGTTTTAACTCCTGTATTTTCACTTGAGATGCTTTCTGCATGTTAATCAAACTTGACCTCTTGAGGGAACTTTGGGACTAGAAACTATCGGAGAGAAATATAATATCTATTGCTGGGGACGTATTGTCTGTCACCCATTTCTGGGATGGTAACTGTATTTGTCATTATTCGGAATACTGGGATCCCAAATAAATTTGTCTAGGATGTCTATTGAACTGGTCCTTTTCACCTCGCAATGGTGATCTTTTTTTCATTTAGTTTAGTAGACTGACAAATTTATTTTAAGCTATCATATCTGAGGGAAATTCTATATGTGCTGTTCTTTGAAGTTTGAACTTTTGTGCACTTTTCAATTAAATGAATCTACACTATATCCAATTGGTAAATTCTATTTCCAAATATCTGTATGGAGGTTAGCGCCTACAAGTCTGATCACTGTAATTAAAAGATATTTGTTAGTTGTAGATTGGCATATTGTAACAGTAGGGCATAATGTTCTTGCAGTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCC</genome_strand>
        <mrna_strand>TTCTCTCTCTTATTCTTGATTGGGTGCGGTTCTCTTTCCATTATTCAAAGTCCCGTCTTTCACCTTCTTCTTTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTTTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTTCACGTTGAAAGATACCGTTCCTAGCATTGAGCGATTTTCTGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E301876" ref_strand="+" ref_description="SGN-E301876 	[cLEW-25-B15]">
      <seq>acaatacccctttctctctctgattcttgattacctgcaacactcttcccattattcaaagagccgtctttcaccttcttctttacctgacaaagactagcatctttgcgcgtgtcccatcctcttctccaacctttttgacaaaggtcaaaatattgctgccaactcccatggaggttaaactatggaatgataagcggaaaagagaaatgtaccaaacctttgcagagctctttgctatcataaaggcagccgaagagctcgagaaggcttatgttcacgacatcatttcaccagctgaatatgaagctgaatgccagaagttgattgctcatttcagaactatatcttccacgttgaaagataccggacctagcatagagcgatttcatgacacctacaaaatggattgccctgctgccttaaaccggcttgtgacctctggggtgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="19497" stop="15892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19197" g_stop="19111" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19110" i_stop="16556" i_length="2555">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.743" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16555" g_stop="16192" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="451" r_length="364" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E301876" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19197" e_stop="19111"/>
          <exon e_start="16555" e_stop="16192"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATACCCCTTTCTCTCTCTTATTCTTGATTACCTGCAACACTCTTCCCATTATTCAAAGTCCCGTCTTTCACCTTCTTCTTTACCGTAAGTCTTTTCTCCTTACTCTTTTTATCTCGTATTTACTCACCAAACTTTATTATTTGTTTCTTCAATTTCTTGAGATATATCTTTCCATGTTGTTAATTTTAGGGTAATTTTTAATATTTTTACTGATCCAATACATATAAACAACAATGGATGTGATTGAATCCGTAGCTAAGGGCTAGATCCGTATCTTTAAGCATGTTTGTTCTAACCAGAGATTTCCAGCTCTATCTCTGTATCATGTTTATGGAGGATTTTAGTATTTAATTAGTAATAATAATATGATCTGTGTAAGAAGGGGCTTTATTTTGTTTGCTCAGATTGCTTTTGAACGATGTTGCTCGGACTCTACAAAATGTCAATGGGTACATGTTGGATCCTTTGAAAATAGTGCTTTTTTGAAGGATAAGATATGGGTGCCGTTGAAGTGTCTGAGCAACATAGGTTTTGATGGATTGTCTTACTCATCCTTACGGCTTACTGCTCTTTTTTTAAATCGGAAGCTCAGATTTTTATTGTTGCATATCCCATTTGGAGGACTATTAGCTCGGGTAATGTATTTTTTCCTTGAAGAAATTTAAGCAGAACCAGATGAAACAAGCATATGAAATATGTATTTTTGAAATGCTGATGTTAAAGATGGATATGTGGAATTGATAAGACAAAATGTATAAAGTAATAATGTAATGCTGAAAGATTGATGAAGATATGTAGAAGGTACAAATTGATCAAGGTGTTCTTATGTTTTACCCATACTCATGGAAAAAATGGAGGAAAAGAGGAGAAAATAGAGCTGAATAGAGAAGTAGACTCATATAGCTGGCCCCAAGTAGTGAGTAAGGTGTGCATTAAGTTGATCTTATTTGTATAACAACATTTATCCATATCTCCTTACATGTGCCTGTTTTTTTTACTTGCATTTGGTTCGTGACATCAGATGTATTTGCTTGTGGTTAGGTTTTCCACTATTTTACTACATTGTTTGATTTATTTCAAAATTTCTATTAGTTTTTCTTCTCTCTGGAACTGATTTATAGGATTGTTCTTTCTGTTGACAGTGTAACATTAGGGTAAGAAGTGAGGATGTACCAAAACAGGAGAGGGGAGAAAGTAAAGGGGTAGAAGTGAGGACAGAAAAAGGAATCAGAGAGAGAGAGAAGAGAAAAATAAGAATGAAATATAGGAACAGAGCTAGATCAATTCAATTCAAACATAGTAAGAAAAGGTTATATTTATTGTGTTTTGAACTTCCCAGATCTCACTTACACTGGGTATGTTGTTGTTTGTTGTCTGATGAACTTTTGATAAGTTGGAATTCCCAATGCATTTAAAACTTATCTCTGAAGTCTAATAAGAAGATAATTATAATGTCAGTAGACCAGACTTAAATCTAACCAATTAAGAGAACACAATGGTAAAGGGTACACACTAATCTAAAAAATAGCTAAGCATAATCTCACAGCTAAATGATGAATATTAGTTGGAGAAAGGTCTTTATCTACAATCAGAGATAGAGTTTCAATTGTTTCAGTAGATTTGACCTTTTCAGGACTCCGTACGATATATAAGGCAGTTTTATTTTGTTTAGCTGAAATGAATTTGATATAAGGCTCAAACATGACAGGGGGAATTTTTTTGTTAGTTACTTGTATATGTATACCTTTTCACGATGTTGGACTGTTATTGTTACATTTTCCTCCTTTCACTCTGTTTGTAAAGGATTTAATACTCTTAAACCTTGTGTTGTATTCGGAGGTAAGGCCCAGCCCCCCTTCTTGTATTTGTCTATTGATGTATACACCCCAGATAGCCAGGGATGAAATTATAAAAAATAAATAATCTGACACAGCAATTTGTCTCTACTCATTCCCTTCTTTCGCCCCCCTTCTCCATCTTTCATTTCTCGCTAACTCTCCAATCTTATTTTTGATGAAGACTTATTTTTCTGTCTTCCTCTCGTAGTCTTCTTTCTTTATTTATTTCTCATTTTTTTTCCTGGTTTCAACTTCCTTTCTGTCTTCCTCTTCTGATAAACTGAGATAATTCCATGTAGTTTTAACTCCTGTATTTTCACTTGAGATGCTTTCTGCATGTTAATCAAACTTGACCTCTTGAGGGAACTTTGGGACTAGAAACTATCGGAGAGAAATATAATATCTATTGCTGGGGACGTATTGTCTGTCACCCATTTCTGGGATGGTAACTGTATTTGTCATTATTCGGAATACTGGGATCCCAAATAAATTTGTCTAGGATGTCTATTGAACTGGTCCTTTTCACCTCGCAATGGTGATCTTTTTTTCATTTAGTTTAGTAGACTGACAAATTTATTTTAAGCTATCATATCTGAGGGAAATTCTATATGTGCTGTTCTTTGAAGTTTGAACTTTTGTGCACTTTTCAATTAAATGAATCTACACTATATCCAATTGGTAAATTCTATTTCCAAATATCTGTATGGAGGTTAGCGCCTACAAGTCTGATCACTGTAATTAAAAGATATTTGTTAGTTGTAGATTGGCATATTGTAACAGTAGGGCATAATGTTCTTGCAGTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCC</genome_strand>
        <mrna_strand>ACAATACCCCTTTCTCTCTCTGATTCTTGATTACCTGCAACACTCTTCCCATTATTCAAAGAGCCGTCTTTCACCTTCTTCTTTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGCTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGAAAAGAGAAATGTACCAAACCTTTGCAGAGCTCTTTGCTATCATAAAGGCAGCCGAAGAGCTCGAGAAGGCTTATGTTCACGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAGAACTATATCTTCCACGTTGAAAGATACCGGACCTAGCATAGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E566519" ref_strand="+" ref_description="SGN-E566519 	[4958]">
      <seq>attattcaaagtcgcggtctttcaccttcttctttacctgacaaagactagcatctttgcgcgtgtcccatcctcttctccaacctttttgacaaaggtcaaaatcttgttgccaactcccatgggaggttaagctatggaatgataagcgggaaagagaaatgtatgaaaactttgcagagctctttgctataataaaggcaacgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="19447" stop="16088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19147" g_stop="19111" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.919"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19110" i_stop="16556" i_length="2555">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.743" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16555" g_stop="16388" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="207" r_length="169" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E566519" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>205</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E566519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19147" e_stop="19111"/>
          <exon e_start="16555" e_stop="16388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTCAAAGTC-CCGTCTTTCACCTTCTTCTTTACCGTAAGTCTTTTCTCCTTACTCTTTTTATCTCGTATTTACTCACCAAACTTTATTATTTGTTTCTTCAATTTCTTGAGATATATCTTTCCATGTTGTTAATTTTAGGGTAATTTTTAATATTTTTACTGATCCAATACATATAAACAACAATGGATGTGATTGAATCCGTAGCTAAGGGCTAGATCCGTATCTTTAAGCATGTTTGTTCTAACCAGAGATTTCCAGCTCTATCTCTGTATCATGTTTATGGAGGATTTTAGTATTTAATTAGTAATAATAATATGATCTGTGTAAGAAGGGGCTTTATTTTGTTTGCTCAGATTGCTTTTGAACGATGTTGCTCGGACTCTACAAAATGTCAATGGGTACATGTTGGATCCTTTGAAAATAGTGCTTTTTTGAAGGATAAGATATGGGTGCCGTTGAAGTGTCTGAGCAACATAGGTTTTGATGGATTGTCTTACTCATCCTTACGGCTTACTGCTCTTTTTTTAAATCGGAAGCTCAGATTTTTATTGTTGCATATCCCATTTGGAGGACTATTAGCTCGGGTAATGTATTTTTTCCTTGAAGAAATTTAAGCAGAACCAGATGAAACAAGCATATGAAATATGTATTTTTGAAATGCTGATGTTAAAGATGGATATGTGGAATTGATAAGACAAAATGTATAAAGTAATAATGTAATGCTGAAAGATTGATGAAGATATGTAGAAGGTACAAATTGATCAAGGTGTTCTTATGTTTTACCCATACTCATGGAAAAAATGGAGGAAAAGAGGAGAAAATAGAGCTGAATAGAGAAGTAGACTCATATAGCTGGCCCCAAGTAGTGAGTAAGGTGTGCATTAAGTTGATCTTATTTGTATAACAACATTTATCCATATCTCCTTACATGTGCCTGTTTTTTTTACTTGCATTTGGTTCGTGACATCAGATGTATTTGCTTGTGGTTAGGTTTTCCACTATTTTACTACATTGTTTGATTTATTTCAAAATTTCTATTAGTTTTTCTTCTCTCTGGAACTGATTTATAGGATTGTTCTTTCTGTTGACAGTGTAACATTAGGGTAAGAAGTGAGGATGTACCAAAACAGGAGAGGGGAGAAAGTAAAGGGGTAGAAGTGAGGACAGAAAAAGGAATCAGAGAGAGAGAGAAGAGAAAAATAAGAATGAAATATAGGAACAGAGCTAGATCAATTCAATTCAAACATAGTAAGAAAAGGTTATATTTATTGTGTTTTGAACTTCCCAGATCTCACTTACACTGGGTATGTTGTTGTTTGTTGTCTGATGAACTTTTGATAAGTTGGAATTCCCAATGCATTTAAAACTTATCTCTGAAGTCTAATAAGAAGATAATTATAATGTCAGTAGACCAGACTTAAATCTAACCAATTAAGAGAACACAATGGTAAAGGGTACACACTAATCTAAAAAATAGCTAAGCATAATCTCACAGCTAAATGATGAATATTAGTTGGAGAAAGGTCTTTATCTACAATCAGAGATAGAGTTTCAATTGTTTCAGTAGATTTGACCTTTTCAGGACTCCGTACGATATATAAGGCAGTTTTATTTTGTTTAGCTGAAATGAATTTGATATAAGGCTCAAACATGACAGGGGGAATTTTTTTGTTAGTTACTTGTATATGTATACCTTTTCACGATGTTGGACTGTTATTGTTACATTTTCCTCCTTTCACTCTGTTTGTAAAGGATTTAATACTCTTAAACCTTGTGTTGTATTCGGAGGTAAGGCCCAGCCCCCCTTCTTGTATTTGTCTATTGATGTATACACCCCAGATAGCCAGGGATGAAATTATAAAAAATAAATAATCTGACACAGCAATTTGTCTCTACTCATTCCCTTCTTTCGCCCCCCTTCTCCATCTTTCATTTCTCGCTAACTCTCCAATCTTATTTTTGATGAAGACTTATTTTTCTGTCTTCCTCTCGTAGTCTTCTTTCTTTATTTATTTCTCATTTTTTTTCCTGGTTTCAACTTCCTTTCTGTCTTCCTCTTCTGATAAACTGAGATAATTCCATGTAGTTTTAACTCCTGTATTTTCACTTGAGATGCTTTCTGCATGTTAATCAAACTTGACCTCTTGAGGGAACTTTGGGACTAGAAACTATCGGAGAGAAATATAATATCTATTGCTGGGGACGTATTGTCTGTCACCCATTTCTGGGATGGTAACTGTATTTGTCATTATTCGGAATACTGGGATCCCAAATAAATTTGTCTAGGATGTCTATTGAACTGGTCCTTTTCACCTCGCAATGGTGATCTTTTTTTCATTTAGTTTAGTAGACTGACAAATTTATTTTAAGCTATCATATCTGAGGGAAATTCTATATGTGCTGTTCTTTGAAGTTTGAACTTTTGTGCACTTTTCAATTAAATGAATCTACACTATATCCAATTGGTAAATTCTATTTCCAAATATCTGTATGGAGGTTAGCGCCTACAAGTCTGATCACTGTAATTAAAAGATATTTGTTAGTTGTAGATTGGCATATTGTAACAGTAGGGCATAATGTTCTTGCAGTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCAT-GGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCG</genome_strand>
        <mrna_strand>ATTATTCAAAGTCGCGGTCTTTCACCTTCTTCTTTACC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATCTTGTTGCCAACTCCCATGGGAGGTTAAGCTATGGAATGATAAGCGGGAAAGAGAAATGTATGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E245897" ref_strand="+" ref_description="SGN-E245897 	[cLEF-51-K24]">
      <seq>ttgaaagagaaatactagctaccacttctctctatgcttcctgcaatgttttgtcaaatagcaatttgcatgttgttttgtggtttcacattatcatcatgtcatcaaacagagatccttaatattatcaaagaaaattctaaccaagtttcatcttcaagcaatttcttatttggaacatcctcttcttgttaccagtatgaaggagctattctcagtgatggaaaaggtctcaacaattgggatgtttttactcaccaagctggtcatattaaagatggaagcaatggagatgttgctgttgatcactacaatcgttatttggaggacattaagctcatggaagatatgggtgttaatgggtatcgtttctctatctcgtgggccagaattctgcccaaggggacatttggagatgttaatatggccggaattgagcactacaataagcttattgatgcactcttacagaaagggatccaaccgttgatcacattaacacattatgacatacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="25380" stop="27818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25680" g_stop="25877" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25878" i_stop="25953" i_length="76">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25954" g_stop="26020" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="265" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26021" i_stop="26101" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26102" g_stop="26160" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="324" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26161" i_stop="27107" i_length="947">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27108" g_stop="27183" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="400" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27184" i_stop="27294" i_length="111">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27295" g_stop="27369" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="475" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27370" i_stop="27477" i_length="108">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27478" g_stop="27518" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="516" r_length="41" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E245897" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25680" e_stop="25877"/>
          <exon e_start="25954" e_stop="26020"/>
          <exon e_start="26102" e_stop="26160"/>
          <exon e_start="27108" e_stop="27183"/>
          <exon e_start="27295" e_stop="27369"/>
          <exon e_start="27478" e_stop="27518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAAGAGAAATACTAGCTACCACTTCTCTCTATGCTTCCTGCAATGTTTTGTCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCACATTATCATCATGTCATCAAACAGAGATCCTTAATATTATCAAAGAAAATTCTAACCAAGTTTCATCTTCAAGCAATTTCTTATTTGGAACATCCTCTTCTTGTTACCAGGTATGTACTTCCTACACTTGATTTTTTTTGGGGGGGTCTGAATTCTTGTTATGAGTACAATTTTTTTTGTCCGCAGTATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGATGTTTTTACTCACCAAGCTGGTCAGCTTATAAAATTCAATTTCTATTAGTCGATTTCTTTTTTTAAAATTTTTTTATTAATTTTGGTTAGTGTTGTTGCAGGTCATATTAAAGATGGAAGCAATGGAGATGTTGCTGTTGATCACTACAATCGTTATTTGGTAAACCTAATTCATCATTTGACTTTTCCTTTTTAATGTAATTTCTGCGAACATTCTTGTTTATAGGACACAACTCTTTTTTCTTTTCTTTGAACTGATCCAATACAGCTAACGAAAAGAAATACTCCATCCGTTTCATAAAAGTTTTTTTTTAATCTTATAGTTTAAAATTAAAGTTATGTCAAATATACTAAATTGCCTTTTAATCTTATGATCGTGAAAAAGTTAAAATTAAAATGTTATAAAAAAAATTATTATTTTTTAAACAAAAAAAAAAGAAGAATATTTCCTTTTTAAAAAAAAGAGTAGGTTAATAATGGTTTGGTCCATAATATGTACGAGTAGGACATACTTGTCTGACAAGTGGGCAATTCATTTCTTTTTATAAGCCCCACTATAAATTGATATATAATATAGTGGCTTCTTATTATTTAAGGCTGGCTATTTCACAAGGCAAACACATTCTTGCATGTTTTTAATCCTGTTCACATGGGATCTATAGTAGTGAGCCACATTGATATTAATTAGATGTTTTCGGATAAATTCTGTTTTGGCCTACTCAAAATCAACAATAAACTGATTAGATAGGAAGTAGCTATGCTTGAACAATTTGTGACACTTTTGGAGATTGATCAAAATTTAACTTTTTCATTCGCGAAGAAAAAGGAAACACACTAATTTGTGCTGGCAACAGAGCATACATGATTGACACAAATTTAGAAATTTCTCAGTATCTAAGATCTAAAATTGGCATAAACTTCTGTCAAATTAATCAGTCACAAGGAACTTGCAAGATAGCAAGACTGGGGAGCACAATTTTTGTTCTGCAACAAGTCAAAGTGTCTCAGAAATGAAGGAATGTTAGATCAATGAAGTGTATTAGCTAGAAGTAGATGGGTAAAACATGAAATTGAAGAATTCTGATGTTTGGTAGTAAAATGAAACAGGAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCAGTAAGTTATAACTGTCACTAGTCGATCTCTTCCCTTCATTTTAAGCAAATACTACTAATTGTCATTTACATTGAACCATCTTTCTCTTCGTCGGTTGTAAATTTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAGGTCAATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACGACTTCTTTATGTTCTGTGAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCA</genome_strand>
        <mrna_strand>TTGAAAGAGAAATACTAGCTACCACTTCTCTCTATGCTTCCTGCAATGTTTTGTCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCACATTATCATCATGTCATCAAACAGAGATCCTTAATATTATCAAAGAAAATTCTAACCAAGTTTCATCTTCAAGCAATTTCTTATTTGGAACATCCTCTTCTTGTTACCAG............................................................................TATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGATGTTTTTACTCACCAAGCTG.................................................................................GTCATATTAAAGATGGAAGCAATGGAGATGTTGCTGTTGATCACTACAATCGTTATTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGGTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCA...............................................................................................................AGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAG............................................................................................................GGATCCAACCGTTGATCACATTAACACATTATGACATACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E379358" ref_strand="+" ref_description="SGN-E379358 	[TUS-3-F23]">
      <seq>attctgatgtttggtagtaaaatgaaacaggaggacattaagctcatggaagatatgggtgttaatggctatcgtttctctatctcgtgggccagaattctgcccagtaagttataactgtcactagtcgatctcttcccttcattttaagcaaatactactaattgtcatttacattgaaccatctttctcttcgtcggttgtaaatttgactcagaggggacatttggagatgttaatatggccggaattgagcactacaataagcttattgatgcactcttacagaaaggtcaattcggcttcacttgctaatagttttaagatatttataaatacaaaatgaagcaaaaaagttaatagggggctcagacgacttctttatgttctgtgaattcagggatccaaccgttgatcacattaacacattatgacataccacaagaacttgaggaaagatatggtggttggcttagttcacaaatacaggatgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacaaccatcaatgagcctaaccttatggctgttcgtggctatagactaggaacttaccctccaagtcgatgctccggtatagttgggaattgtagtgctggtgattcagaaagggagcccttcattgcagctcacnatatgatcctatctcatgcagctgctgtcagcacttaccgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="26778" stop="28181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27078" g_stop="27565" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27566" i_stop="27640" i_length="75">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27641" g_stop="27881" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="729" r_length="241" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E379358" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27078" e_stop="27565"/>
          <exon e_start="27641" e_stop="27881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTGATGTTTGGTAGTAAAATGAAACAGGAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCAGTAAGTTATAACTGTCACTAGTCGATCTCTTCCCTTCATTTTAAGCAAATACTACTAATTGTCATTTACATTGAACCATCTTTCTCTTCGTCGGTTGTAAATTTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAGGTCAATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACGACTTCTTTATGTTCTGTGAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACAAATACAGTAAGTAGCTGCTCCCATCTTACACTTTAAGGTAGTTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGACTAGGAACTTACCCTCCAAGTCGATGCTCCGGTATAGTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTGTCAGCACTTACCGT</genome_strand>
        <mrna_strand>ATTCTGATGTTTGGTAGTAAAATGAAACAGGAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCAGTAAGTTATAACTGTCACTAGTCGATCTCTTCCCTTCATTTTAAGCAAATACTACTAATTGTCATTTACATTGAACCATCTTTCTCTTCGTCGGTTGTAAATTTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAGGTCAATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACGACTTCTTTATGTTCTGTGAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACAAATACA...........................................................................GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGACTAGGAACTTACCCTCCAAGTCGATGCTCCGGTATAGTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACNATATGATCCTATCTCATGCAGCTGCTGTCAGCACTTACCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E209169" ref_strand="+" ref_description="SGN-E209169 	[cLEC-38-J17]">
      <seq>attctgatgtttggtagtaaaatgaaacaggaggacattaagctcatggaagatatgggtgttaatggctatcgtttctctatctcgtgggccagaattctgcccagtaagttataactgtcactagtcgatctcttcccttcattttaagcaaatactactaattgtcatttacattgaaccatctttctcttcgtcggttgtaaatttgactcagaggggacatttggagatgttaatatggccggaattgagcactacaataagcttattgatgcactcttacagaaaggtcaattcggcttcacttgctaatagttttaagatatttataaatacaaaatgaagcaaaaaagttaatagggggctcagacgacttctttatgttctgtgaattcagggatccaaccgttgatcacattaacacattatgacataccacaagaacttgaggaaagatatggtggttggcttagttcacaaatacaggatgatttcagctattatgcagacatatgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="26778" stop="27974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27078" g_stop="27565" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27566" i_stop="27640" i_length="75">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27641" g_stop="27674" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="522" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E209169" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27078" e_stop="27565"/>
          <exon e_start="27641" e_stop="27674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTGATGTTTGGTAGTAAAATGAAACAGGAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCAGTAAGTTATAACTGTCACTAGTCGATCTCTTCCCTTCATTTTAAGCAAATACTACTAATTGTCATTTACATTGAACCATCTTTCTCTTCGTCGGTTGTAAATTTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAGGTCAATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACGACTTCTTTATGTTCTGTGAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACAAATACAGTAAGTAGCTGCTCCCATCTTACACTTTAAGGTAGTTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTTC</genome_strand>
        <mrna_strand>ATTCTGATGTTTGGTAGTAAAATGAAACAGGAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCAGTAAGTTATAACTGTCACTAGTCGATCTCTTCCCTTCATTTTAAGCAAATACTACTAATTGTCATTTACATTGAACCATCTTTCTCTTCGTCGGTTGTAAATTTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAGGTCAATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACGACTTCTTTATGTTCTGTGAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACAAATACA...........................................................................GGATGATTTCAGCTATTATGCAGACATATGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E349714" ref_strand="+" ref_description="SGN-E349714 	[cTOS-3-J12]">
      <seq>accctattatattatgaagatatcccaaagaaatggtagaaattctgggatctaatctgccagacttttcaaagaatgatttgagcaagttgagttatggcctagatttcattggcatcaattactatacggctaaatatatcaaagattgcttatattctgcctgtgaacatggaaacacttggtcagagggttccttttttgagacgagagaaaaagacggtgtctacattggtcaacctactgaagtggactggctctttctgtacccacaagggatgaaaaaaattgtgatgtacatgaaggacagattcaacaatactcctatggttatcaccgaaaatggcattgctgagaatgataatctgaatccttcaataacagacaccttgaacgatattcatagagtgaactatatgcatagctacttaaattcattggcaaatgcaatcacggatggtgcagatgtgagagggtactttggttggtcccttctcgacaactttgagtggctagatggatataagttaagatttggacttcactatgtcaactatactaatcttcagagaaccccaaaattatcagctaccatgtataaacagctcatgtataacttcaacatacaactcgaaaaaaatactgcccagaactagtaggagaagatgatggaaagtaaatattactttcactccagtgagactgtaatcatttaaacaagatttgttaattacacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="28092" stop="29688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28392" g_stop="28633" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28634" i_stop="28759" i_length="126">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28760" g_stop="28862" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="345" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28863" i_stop="28995" i_length="133">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28996" g_stop="29388" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="738" r_length="393" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E349714" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28392" e_stop="28633"/>
          <exon e_start="28760" e_stop="28862"/>
          <exon e_start="28996" e_stop="29388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCTATTATATTAGGAAGATATCCCAAAGAAATGGTAGAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGTTGAGTTATGGCCTAGATTTCATTGGCATCAATTACTATACGGCTAAATATATCAAAGATTGCTTATATTCTGCCTGTGAACATGGAAACACTTGGTCAGAGGGTTCCTTTTTTGAGACGAGAGAAAAAGACGGTGTCTACATTGGTCAACCTGTATGTTTTCTCCTCTTTTAACATTTAAGCATTCTTCATCTTTTAACCCTCCACTATGCCAAACTATTACTGGCACTTGTGCATTGCTGAATTTTATTTATTTTCAACAACTTCAAAATGAATCAGACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCTATGGTTATCACCGAAAATGGTAAGAAGAAAAGAAATTTCACATTCTTGTCATTTAAAAGCGAGATATAGTTTACTTAATCAACTAATAACCTGAACAAGATGCATTTGGATCTGTTGGGATGCATCCACTGACACAACTTGTAACATTGCAGGCATTGCTGAGAATGATAATCTGAATCCTTCAATAACAGACACCTTGAACGATATTCATAGAGTGAACTATATGCATAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGAGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCATGTATAAACAGCTCATGTATAACTTCAACATACAACTCGAAAAAAATACTGCCCAGAACTAGTAGGAGAAGATGATGGAAAGTAAATATTATTTTCACTCCAGTGGGACTGTAATCATTTAAACAAGATTTGTTAATTACACAG</genome_strand>
        <mrna_strand>ACCCTATTATATTATGAAGATATCCCAAAGAAATGGTAGAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGTTGAGTTATGGCCTAGATTTCATTGGCATCAATTACTATACGGCTAAATATATCAAAGATTGCTTATATTCTGCCTGTGAACATGGAAACACTTGGTCAGAGGGTTCCTTTTTTGAGACGAGAGAAAAAGACGGTGTCTACATTGGTCAACCT..............................................................................................................................ACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCTATGGTTATCACCGAAAATG.....................................................................................................................................GCATTGCTGAGAATGATAATCTGAATCCTTCAATAACAGACACCTTGAACGATATTCATAGAGTGAACTATATGCATAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGAGGGTACTTTGGTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCATGTATAAACAGCTCATGTATAACTTCAACATACAACTCGAAAAAAATACTGCCCAGAACTAGTAGGAGAAGATGATGGAAAGTAAATATTACTTTCACTCCAGTGAGACTGTAATCATTTAAACAAGATTTGTTAATTACACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E379053" ref_strand="+" ref_description="SGN-E379053 	[TUS-3-F23]">
      <seq>tgaaaataatattttctttccatcatcttctcctactagttctgggcagtatttttttcgagttgtatgttgaagttatacatgagctgtttatacatggtagctgataattttggggttctctgaagattagtatagttgacatagtgaagtccaaatcttaacttatatccatctagccactcaaagttgtcgagaagggaccaaacaaagtaccctctcacatctgcaccatccgtgattgcatttgccaatgaatttaagtagctatgcatatagttcactctatgaatatcgttcaaggtgtctgttattgaaggattcagattatcattctcagcaatgcctgcaatgttacaagttgtgtcagtggatgcatcccaacagatccaaatgcatcttgttcaggttattagttgattaagtaaactatatctcgcttttaaatgacaagaatgtgaaatttcttttcttcttaccattttcggtgataaccataggagtattgttgaatctgtccttcatgtacatcacaatttttttcatcccttgtgggtacagaaagagccagtccacttcagtctgattcattttgaagttgttgaaaataaataaaattcagcaatgcacaagtgccagtaatagtttggcatagtggagggttaaaagatgaagaatgcttaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="29641" stop="28355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29341" g_stop="28655" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E379053" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29341" e_stop="28655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAATAATATTTACTTTCCATCATCTTCTCCTACTAGTTCTGGGCAGTATTTTTTTCGAGTTGTATGTTGAAGTTATACATGAGCTGTTTATACATGGTAGCTGATAATTTTGGGGTTCTCTGAAGATTAGTATAGTTGACATAGTGAAGTCCAAATCTTAACTTATATCCATCTAGCCACTCAAAGTTGTCGAGAAGGGACCAAACAAAGTACCCTCTCACATCTGCACCATCCGTGATTGCATTTGCCAATGAATTTAAGTAGCTATGCATATAGTTCACTCTATGAATATCGTTCAAGGTGTCTGTTATTGAAGGATTCAGATTATCATTCTCAGCAATGCCTGCAATGTTACAAGTTGTGTCAGTGGATGCATCCCAACAGATCCAAATGCATCTTGTTCAGGTTATTAGTTGATTAAGTAAACTATATCTCGCTTTTAAATGACAAGAATGTGAAATTTCTTTTCTTCTTACCATTTTCGGTGATAACCATAGGAGTATTGTTGAATCTGTCCTTCATGTACATCACAATTTTTTTCATCCCTTGTGGGTACAGAAAGAGCCAGTCCACTTCAGTCTGATTCATTTTGAAGTTGTTGAAAATAAATAAAATTCAGCAATGCACAAGTGCCAGTAATAGTTTGGCATAGTGGAGGGTTAAAAGATGAAGAATGCTTAAATG</genome_strand>
        <mrna_strand>TGAAAATAATATTTTCTTTCCATCATCTTCTCCTACTAGTTCTGGGCAGTATTTTTTTCGAGTTGTATGTTGAAGTTATACATGAGCTGTTTATACATGGTAGCTGATAATTTTGGGGTTCTCTGAAGATTAGTATAGTTGACATAGTGAAGTCCAAATCTTAACTTATATCCATCTAGCCACTCAAAGTTGTCGAGAAGGGACCAAACAAAGTACCCTCTCACATCTGCACCATCCGTGATTGCATTTGCCAATGAATTTAAGTAGCTATGCATATAGTTCACTCTATGAATATCGTTCAAGGTGTCTGTTATTGAAGGATTCAGATTATCATTCTCAGCAATGCCTGCAATGTTACAAGTTGTGTCAGTGGATGCATCCCAACAGATCCAAATGCATCTTGTTCAGGTTATTAGTTGATTAAGTAAACTATATCTCGCTTTTAAATGACAAGAATGTGAAATTTCTTTTCTTCTTACCATTTTCGGTGATAACCATAGGAGTATTGTTGAATCTGTCCTTCATGTACATCACAATTTTTTTCATCCCTTGTGGGTACAGAAAGAGCCAGTCCACTTCAGTCTGATTCATTTTGAAGTTGTTGAAAATAAATAAAATTCAGCAATGCACAAGTGCCAGTAATAGTTTGGCATAGTGGAGGGTTAAAAGATGAAGAATGCTTAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E346377" ref_strand="+" ref_description="SGN-E346377 	[cTOF-23-A2]">
      <seq>tcgaaagagaaatactagctaccacttctctctatttttcctgcaatgttttgtcgaatagcaatttgcatgttgttttgtagtttcataatatcatcatgtcatcaaacagatatccttaatattatcaaaaaaaatcctaaccaagtttcaacttcaagcaatttcttatttggaacatcctcttcctgttaccagtatgaaggagctattctcagtgatggaaaaggtctcaacaattgggatgtttttactcacgaagctggtcatattaaggatggaagcaacggagatgttgctgttgatcactacaatcgttatttggaggacgttaagctcatggaagatttgggtgttaatggctatcgtttctctatctcgtgggcaagaattctgcccaaagggacatttggagatgttaatatggctggaattgagcactacaataagcttattgatgcactcttacagaaagggatccaaccgttgatcacattaacacattatgacataccacaagaacttgaggaaagatatggtggttggcttagttcacgaatacaggatgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacaaccatcaatgagcctaaccttatggcttgttcgtggctatagagagggaacttaccctccatctcgatgctccggtatatttgggaattgtagtgctggtgattcagaaagggagcccttcattgcagctcacaatatgatccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="29789" stop="32350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30089" g_stop="30286" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30287" i_stop="30363" i_length="77">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30364" g_stop="30430" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="265" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30431" i_stop="30503" i_length="73">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30504" g_stop="30562" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="324" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30563" i_stop="31313" i_length="751">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31314" g_stop="31389" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="400" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31390" i_stop="31496" i_length="107">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31497" g_stop="31571" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="475" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31572" i_stop="31676" i_length="105">
            <donor d_prob="0.739" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="31677" g_stop="31764" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="563" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="31765" i_stop="31839" i_length="75">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="31840" g_stop="32050" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="775" r_length="212" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E346377" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30089" e_stop="30286"/>
          <exon e_start="30364" e_stop="30430"/>
          <exon e_start="30504" e_stop="30562"/>
          <exon e_start="31314" e_stop="31389"/>
          <exon e_start="31497" e_stop="31571"/>
          <exon e_start="31677" e_stop="31764"/>
          <exon e_start="31840" e_stop="32050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAAAGAGAAATACTAGCTACCACTTCTCTCTATTTTTCCTGCAATGTTTTGTCGAATAGCAATTTGCATGTTGTTTTGTAGTTTCATAATATCATCATGTCATCAAACAGATATCCTTAATATTATCAAAAAAAATCCTAACCAAGTTTCAACTTCAAGCAATTTCTTATTTGGAACATCCTCTTCCTGTTACCAGGTATGTACTTCCTACACTTGATTTTTTTTGGGGGGGTCTGAATTCTTGTTATGAGTACAATTTTTTTTTGTCCGCAGTATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGATGTTTTTACTCACGAAGCTGGTGAGCTTATAAAAAAATTAATGAATCTCAATTTCTTTTTAAAATTTATTAATTTCGGTTAGTGTTGTTGCAGGTCATATTAAGGATGGAAGCAACGGAGATGTTGCTGTTGATCACTACAATCGTTATTTGGTAAACCTAATTCATCATTTGACTTTTCCGTTTTAATGTAATTTCTACAAACGTTGTTGTATATAGGTTCACACAACTCTTTTTCTTTTCTTTTCAACTGATCCATTACAGTTAAGGAAAAGAAAGATATTTTTTTTAGTGAAAGAGTAGGTTTGGTCAATAATATGTAGGAGTAGGACATACTTGTCTGACAAAATTTTATAAGCCCCATTATCAATTGATAAATAGTATAGTATTAGTGGCTTCTTATTATTTAAGGCTGGCTATTTCACAAGGCGAACACATTCTTGCATGTTTTTAATCCTGTTGAAATGGGATCTATAGTAGTGAGCCACATTGATATGAATTAGATGTTTTCGGATAAATTCTGTTTTGGCCTACTCAAAATCAACAATGAACTGATTAGATAGGAACAATAAATTAGACTTTTGGAGATGAGGAATTAACTTTTTCATTTGCGAAGAAAAGGGAAACACACTAATTTGTGCTGGCAACAGAGCATACATGATTGACACAAATTTTGAAATTTCTCAGTATCTAAGATCTAAAATTGGCATAAACTCGTGTCAAATTAATCAGTCATAAGGAACTTGCAAATAGCAAAACTGGGGAGCACAAAATTTTCGTTCTGCAACAAGTCGAAGTGTCTCAGAAATGAATGAATGTTGGACTAATGCAGTGTATTAGCAAGAAGTCGATGTGCAAAACATGAAATTGAAGAATTCTGATGTTTGGTAATAAAATGAAACAGGAGGACGTTAAGCTCATGGAAGATTTGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCAAGAATTCTGCCCAGTAAGTTATAACTGTCACTAGTCTCTTCCCTTCATTTTCAGCAAATACTCATTCTTGTCATTTCCATTGAACAATCTTTTCCTTTGTCGGTTGTAAATTTGACACAGAAGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAGGTCAATTCGGCTTCACTTGCTAATAGTTTGATAAATCCAAAATGAAGCAAAAAGGTTATTAATTTTGTGGGCTCAGACAACTTCTTTATGTGCTGTGAAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACAGTAAGTAGCTGCTCCCATCTTACACTTTTAAGGTAGTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGC-TGTTCGTGGCTATAGAGAGGGAACTTACCCTCCATCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTA</genome_strand>
        <mrna_strand>TCGAAAGAGAAATACTAGCTACCACTTCTCTCTATTTTTCCTGCAATGTTTTGTCGAATAGCAATTTGCATGTTGTTTTGTAGTTTCATAATATCATCATGTCATCAAACAGATATCCTTAATATTATCAAAAAAAATCCTAACCAAGTTTCAACTTCAAGCAATTTCTTATTTGGAACATCCTCTTCCTGTTACCAG.............................................................................TATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGATGTTTTTACTCACGAAGCTG.........................................................................GTCATATTAAGGATGGAAGCAACGGAGATGTTGCTGTTGATCACTACAATCGTTATTTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACGTTAAGCTCATGGAAGATTTGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCAAGAATTCTGCCCA...........................................................................................................AAGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAG.........................................................................................................GGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACA...........................................................................GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTTGTTCGTGGCTATAGAGAGGGAACTTACCCTCCATCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E376534" ref_strand="+" ref_description="SGN-E376534 	[TUS-17-H21]">
      <seq>tgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacaaccatcaatgagcctaaccttatggctgttcgtggctatagagagggaacttaccctccatctcgatgctccggtatatttgggaattgtagtgctggtgattcagaaagggagcccttcattgcagctcacaatatgatcctatctcatgcagctgctatcagtatttaccgtaccagatatcagaaaagacaaggaggaatgatcggaatttctttggatacccaatggtttgaaccatttagcaattcctcagaagacatagccgcagctgagagagctcggtcattctacgtcaactggtttttagaccctattatattaggaagatatcccaaagaaatggtacaaattctgggatctaatctgccagacttttcaaagaatgatttgagcaagctgagttatggcttggatttcattggcatcaattactatacggctgcatatatcaaagattgcttatattctgcatgtgaacatggaagaacttggtcagagggttcctttttagatactagagaaaaagacggtgtctacattggtcaacctactgaagtggactggctctttctgtacccacaagggatgaaaaaaattgtgatgtacatgaaggacagattcaacaatactcccatggtcatcaccgaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="31543" stop="33395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31843" g_stop="32092" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32093" i_stop="32396" i_length="304">
            <donor d_prob="0.805" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32397" g_stop="32512" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="366" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32513" i_stop="32617" i_length="105">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.846" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32618" g_stop="32867" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="616" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32868" i_stop="32993" i_length="126">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32994" g_stop="33095" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="718" r_length="102" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E376534" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31843" e_stop="32092"/>
          <exon e_start="32397" e_stop="32512"/>
          <exon e_start="32618" e_stop="32867"/>
          <exon e_start="32994" e_stop="33095"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGAGAGGGAACTTACCCTCCATCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTATCAGTATTTACCGTACCAGATATCAGGTTCTTTCGATGGCTCTATGCCCTTTCCCATTTGCCATGTCAACTCTCAACACGCATGATCTTGCAGAATTAATCCAAATGGTTTACCCCTTTAGTGCAACACTATTTTCTGGCTTGTAAATGATATGAAGGTGAATTTTGGGGTTAGTAAAACAAGGAAAATGGTATACTTGGAAGACTAAAGCACGAAAATTATGCTTGGAAACTGTTTCCCCCCCTCTATCTATCAAATGGTATATTGTAGAAGTTCATTAGAAGATCATACAAATATCAGTAATATAGTCTATTTTATGCTGCTTTTCAGAAAAGACAAGGAGGAATGATCGGAATTTCTTTGGATACCCAATGGTTTGAACCATTTAGCAATTCCTCAGAAGACATAGCCGCAGCTGAGAGAGCTCGGTCATTCTACGTCAACTGGTAATCTTTCCTTATCAGTAGTTCAGTACTGGAATCTGGTTTCTTGTGCATCAGAAAGAGAGGGAAAAAATGTTATTTTTTTACTAAGTACCCCTATATATGCAGGTTTTTAGACCCTATTATATTAGGAAGATATCCCAAAGAAATGGTACAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGCTGAGTTATGGCTTGGATTTCATTGGCATCAATTACTATACGGCTGCATATATCAAAGATTGCTTATATTCTGCATGTGAACATGGAAGAACTTGGTCAGAGGGTTCCTTTTTAGATACTAGAGAAAAAGACGGTGTCTACATTGGTCAACCTGTATGTTTTCTCCTCTTTAATATTTGAGCATTCCTCATCTTCTAACCCTCCACTCTGCCAAACTATTACTGGCACTTTGTGCATTGCTAAATTTTATTTATTTTCCACAACTTCAATATGAATCAGACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCAATGGTCATCACCGAAAAT</genome_strand>
        <mrna_strand>TGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGAGAGGGAACTTACCCTCCATCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTATCAGTATTTACCGTACCAGATATCAG................................................................................................................................................................................................................................................................................................................AAAAGACAAGGAGGAATGATCGGAATTTCTTTGGATACCCAATGGTTTGAACCATTTAGCAATTCCTCAGAAGACATAGCCGCAGCTGAGAGAGCTCGGTCATTCTACGTCAACTG.........................................................................................................GTTTTTAGACCCTATTATATTAGGAAGATATCCCAAAGAAATGGTACAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGCTGAGTTATGGCTTGGATTTCATTGGCATCAATTACTATACGGCTGCATATATCAAAGATTGCTTATATTCTGCATGTGAACATGGAAGAACTTGGTCAGAGGGTTCCTTTTTAGATACTAGAGAAAAAGACGGTGTCTACATTGGTCAACCT..............................................................................................................................ACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCCATGGTCATCACCGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E210430" ref_strand="+" ref_description="SGN-E210430 	[cLEC-35-I11]">
      <seq>tgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacaaccatcaatgagcctaaccttatggctgttcgtggctatagagagggaacttaccctccatctcgatgctccggtatatttgggaattgtagtgctggtgattcagaaagggagcccttcattgcagctcacaatatgatcctatctcatgcagctgctatcagtatttaccgtaccagatatcagaaaagacaaggaggaatgatcggaatttctttggatacccaatggtttgaaccatttagcaattcctcagaagacatagccgcagcttgagagagctcggtcattctacgtcaactggtttttagaccctattatattaggaagatatcccaaagaaatggtacaaattctgggatctaatctgccagacttttcaaagaatgatttgagcaagctgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="31543" stop="33020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31843" g_stop="32092" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32093" i_stop="32396" i_length="304">
            <donor d_prob="0.805" d_score="1.00"/>
            <acceptor a_prob="0.855" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32397" g_stop="32512" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="367" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32513" i_stop="32617" i_length="105">
            <donor d_prob="0.983" d_score="0.96"/>
            <acceptor a_prob="0.846" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32618" g_stop="32720" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="470" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E210430" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31843" e_stop="32092"/>
          <exon e_start="32397" e_stop="32512"/>
          <exon e_start="32618" e_stop="32720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGAGAGGGAACTTACCCTCCATCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTATCAGTATTTACCGTACCAGATATCAGGTTCTTTCGATGGCTCTATGCCCTTTCCCATTTGCCATGTCAACTCTCAACACGCATGATCTTGCAGAATTAATCCAAATGGTTTACCCCTTTAGTGCAACACTATTTTCTGGCTTGTAAATGATATGAAGGTGAATTTTGGGGTTAGTAAAACAAGGAAAATGGTATACTTGGAAGACTAAAGCACGAAAATTATGCTTGGAAACTGTTTCCCCCCCTCTATCTATCAAATGGTATATTGTAGAAGTTCATTAGAAGATCATACAAATATCAGTAATATAGTCTATTTTATGCTGCTTTTCAGAAAAGACAAGGAGGAATGATCGGAATTTCTTTGGATACCCAATGGTTTGAACCATTTAGCAATTCCTCAGAAGACATAGCCGCAGC-TGAGAGAGCTCGGTCATTCTACGTCAACTGGTAATCTTTCCTTATCAGTAGTTCAGTACTGGAATCTGGTTTCTTGTGCATCAGAAAGAGAGGGAAAAAATGTTATTTTTTTACTAAGTACCCCTATATATGCAGGTTTTTAGACCCTATTATATTAGGAAGATATCCCAAAGAAATGGTACAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGCTGAGT</genome_strand>
        <mrna_strand>TGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGAGAGGGAACTTACCCTCCATCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTATCAGTATTTACCGTACCAGATATCAG................................................................................................................................................................................................................................................................................................................AAAAGACAAGGAGGAATGATCGGAATTTCTTTGGATACCCAATGGTTTGAACCATTTAGCAATTCCTCAGAAGACATAGCCGCAGCTTGAGAGAGCTCGGTCATTCTACGTCAACTG.........................................................................................................GTTTTTAGACCCTATTATATTAGGAAGATATCCCAAAGAAATGGTACAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGCTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E620756" ref_strand="+" ref_description="SGN-E620756 	[71461]">
      <seq>acttttcaaagaatgatttgagcaagttgagttatggcctagatttcattggcatcaattgctatacggctaactatatcaaagattgcttatattctgcctgtgaacatggaaatacttggtcagagggttcctattttattactatagaaaaagacggtgtcttcattgggcaacctactggagtggaatggctctttctgtacccacaagggatgaaaaatattgtgatgtacatgaaggacaaattcaacaatactccaatggttatcaccgaaaatggcattgctgagaacgataatctgaatccttcaataacggacaccttgaacgatattcatagagtgaactatatgcatagctacttaaattctctggcaaatgcaatcagggaaggtgcagacgtgagggggtactttgtttggtcccttctcgacaactttgagtggctagatggatataagctaagatttggacttcactatgtcaactacactaatctccagagaaccccaaaattatcagctaccagatataaacagctcatgtataacttcaacatacagcttgaaacacatactggccagaactagtggctgggagaagacgatgaaaagcggaggcttgtaaagtctattgtgtaatgaaacaaataagtgttcagcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="28155" stop="33946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32689" g_stop="32867" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32868" i_stop="32993" i_length="126">
            <donor d_prob="0.962" d_score="0.86"/>
            <acceptor a_prob="0.941" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32994" g_stop="33096" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="282" r_length="103" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33097" i_stop="33229" i_length="133">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.830" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33230" g_stop="33579" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="632" r_length="350" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E620756" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E620756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32689" e_stop="32867"/>
          <exon e_start="32994" e_stop="33096"/>
          <exon e_start="33230" e_stop="33579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTTCAAAGAATGATTTGAGCAAGCTGAGTTATGGCTTGGATTTCATTGGCATCAATTACTATACGGCTGCATATATCAAAGATTGCTTATATTCTGCATGTGAACATGGAAGAACTTGGTCAGAGGGTTCCTTTTTAGATACTAGAGAAAAAGACGGTGTCTACATTGGTCAACCTGTATGTTTTCTCCTCTTTAATATTTGAGCATTCCTCATCTTCTAACCCTCCACTCTGCCAAACTATTACTGGCACTTTGTGCATTGCTAAATTTTATTTATTTTCCACAACTTCAATATGAATCAGACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCAATGGTCATCACCGAAAATGGTAAGAAGAAAAAAAAGTTCACATTCTTGTCATATAAAAGCGAGCTATAGCTTAATTTATCAACTAATAACCTGAACAAGATGCATTTGGATCTGTTAGGATGCAATTACTGACACAAGTGGCAATGTTGCAGGCATTGCTGAGAATGATAATCTGAATCCTTCAATAATAGACACCTTGAACGATTTTCATAGAGTGGACTATATGCGTAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGGGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAGCTCATGTATAACTTCAACATACAACTTGAAAAAAATACTGCCCAGAACTAGTGGCCGGGAGAAGACGATGAAAAGCGGAGGCTTCTTAAG</genome_strand>
        <mrna_strand>ACTTTTCAAAGAATGATTTGAGCAAGTTGAGTTATGGCCTAGATTTCATTGGCATCAATTGCTATACGGCTAACTATATCAAAGATTGCTTATATTCTGCCTGTGAACATGGAAATACTTGGTCAGAGGGTTCCTATTTTATTACTATAGAAAAAGACGGTGTCTTCATTGGGCAACCT..............................................................................................................................ACTGGAGTGGAATGGCTCTTTCTGTACCCACAAGGGATGAAAAATATTGTGATGTACATGAAGGACAAATTCAACAATACTCCAATGGTTATCACCGAAAATG.....................................................................................................................................GCATTGCTGAGAACGATAATCTGAATCCTTCAATAACGGACACCTTGAACGATATTCATAGAGTGAACTATATGCATAGCTACTTAAATTCTCTGGCAAATGCAATCAGGGAAGGTGCAGACGTGAGGGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGCTAAGATTTGGACTTCACTATGTCAACTACACTAATCTCCAGAGAACCCCAAAATTATCAGCTACCAGATATAAACAGCTCATGTATAACTTCAACATACAGCTTGAAACACATACTGGCCAGAACTAGTGGCTGGGAGAAGACGATGAAAAGCGGAGGCTTGTAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E352174" ref_strand="+" ref_description="SGN-E352174 	[cTOS-13-G20]">
      <seq>ttggtcagagggttcctttttagatactagagaaaaagacggtgtctacattggtcaacctactgaagtggactggctctttctgtacccacaagggatgaaaaaaattgtgatgtacatgaaggacagattcaacaatactccaatggtcatcaccgaaaatggcattgctgagaatgataatctgaatccttcaataatagacaccttgaacgattttcatagagtggactatatgcgtagctacttaaattcattggcaaatgcaatcacggatggtgcagatgtgagggggtactttgtttggtcccttctcgacaactttgagtggctagatggatataagttaagatttggacttcactatgtcaactatactaatcttcagagaaccccaaaattatcagctaccaggtataaacagctcatgtataacttcaacatacaacttgaaaaaaatactgcccagaactagtggccgggaagagacgatgaaaagcggaggcttcttaagatattttcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="32507" stop="33893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32807" g_stop="32867" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32868" i_stop="32993" i_length="126">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32994" g_stop="33096" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="164" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33097" i_stop="33229" i_length="133">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.830" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33230" g_stop="33593" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="527" r_length="363" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E352174" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32807" e_stop="32867"/>
          <exon e_start="32994" e_stop="33096"/>
          <exon e_start="33230" e_stop="33593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTCAGAGGGTTCCTTTTTAGATACTAGAGAAAAAGACGGTGTCTACATTGGTCAACCTGTATGTTTTCTCCTCTTTAATATTTGAGCATTCCTCATCTTCTAACCCTCCACTCTGCCAAACTATTACTGGCACTTTGTGCATTGCTAAATTTTATTTATTTTCCACAACTTCAATATGAATCAGACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCAATGGTCATCACCGAAAATGGTAAGAAGAAAAAAAAGTTCACATTCTTGTCATATAAAAGCGAGCTATAGCTTAATTTATCAACTAATAACCTGAACAAGATGCATTTGGATCTGTTAGGATGCAATTACTGACACAAGTGGCAATGTTGCAGGCATTGCTGAGAATGATAATCTGAATCCTTCAATAATAGACACCTTGAACGATTTTCATAGAGTGGACTATATGCGTAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGGGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAGCTCATGTATAACTTCAACATACAACTTGAAAAAAATACTGCCCAGAACTAGTGGCCGGGAGAAGACGATGAAAAGCGGAGGCTTCTTAAGATTATTTTCATTCT</genome_strand>
        <mrna_strand>TTGGTCAGAGGGTTCCTTTTTAGATACTAGAGAAAAAGACGGTGTCTACATTGGTCAACCT..............................................................................................................................ACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCAATGGTCATCACCGAAAATG.....................................................................................................................................GCATTGCTGAGAATGATAATCTGAATCCTTCAATAATAGACACCTTGAACGATTTTCATAGAGTGGACTATATGCGTAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGGGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAGCTCATGTATAACTTCAACATACAACTTGAAAAAAATACTGCCCAGAACTAGTGGCCGGGAAGAGACGATGAAAAGCGGAGGCTTCTTAAGA-TATTTTCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E376533" ref_strand="-" ref_description="SGN-E376533 	[TUS-17-H21]">
      <seq>tggactggctctttctgtacccacaagggatgaaaaaaattgtgatgtacatgaaggacaaattcaacaatactccaatggtcatcaccgaaaatggcattgctgagaatgataatttgaatccttcaataatagacaccttgaacgattttcataaagtggactatatgggtagctacttaaattcattggcaaatgcaatcacggatggtgcaaatgtgagggggtactttgtttggtcccttctcgacaactttgagtggctaaatggatataagttaaaatttggacttcactatgtcaactatactaattttcaaagaaccccaaaattatcagctaccaggtataaacagctcatgtataacttcaacatacaacttgaaaaaaatactgcccaaaactagtggccgggaaaaaacgatgaaaaacggaggctttttaaaattattttcattctgtgtctgttgttggaagacagtttattgtgtaatgaaacaaattagtggtcagaaatactctattgaaaattgattataatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="32701" stop="45765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33001" g_stop="33096" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33097" i_stop="33229" i_length="133">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.830" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33230" g_stop="33707" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="573" r_length="477" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E376533" ref_strand="-">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E376533" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33001" e_stop="33096"/>
          <exon e_start="33230" e_stop="33707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCAATGGTCATCACCGAAAATGGTAAGAAGAAAAAAAAGTTCACATTCTTGTCATATAAAAGCGAGCTATAGCTTAATTTATCAACTAATAACCTGAACAAGATGCATTTGGATCTGTTAGGATGCAATTACTGACACAAGTGGCAATGTTGCAGGCATTGCTGAGAATGATAATCTGAATCCTTCAATAATAGACACCTTGAACGATTTTCATAGAGTGGACTATATGCGTAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGGGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAGCTCATGTATAACTTCAACATACAACTTGAAAAAAATACTGCCCAGAACTAGTGGCCGGGAGAAGACGATGAAAAGCGGAGGCTTCTTAAGATTATTTTCATTCTGTGTCTGTTGTTGGAAGACAGTTTATTGTGTAATGAAACAAATTAGTGGTCAGAAATACTCTATTGAAAATTGATTATAATTATCCAGATTTATTGATGAAAAAGAAGAAAATA</genome_strand>
        <mrna_strand>TGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAAATTCAACAATACTCCAATGGTCATCACCGAAAATG.....................................................................................................................................GCATTGCTGAGAATGATAATTTGAATCCTTCAATAATAGACACCTTGAACGATTTTCATAAAGTGGACTATATGGGTAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAAATGTGAGGGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAAATGGATATAAGTTAAAATTTGGACTTCACTATGTCAACTATACTAATTTTCAAAGAACCCCAAAATTATCAGCTACCAGGTATAAACAGCTCATGTATAACTTCAACATACAACTTGAAAAAAATACTGCCCAAAACTAGTGGCCGGGAAAAAACGATGAAAAACGGAGGCTTTTTAAAATTATTTTCATTCTGTGTCTGTTGTTGGAAGACAGTTTATTGTGTAATGAAACAAATTAGTGGTCAGAAATACTCTATTGAAAATTGATTATAATT-TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E545385" ref_strand="+" ref_description="SGN-E545385 	[TUS-68-D8]">
      <seq>gaagaggttgcaattatttgtgcctttttctcaggagcttgaaagagaaatatcaatcaccacttctctctatttttcctcattcacttaacaaatcaaagctgtattatgcttcctgcaatgttttatcaaatagcaatttgcatgttgttttgtggtttcatagtatcatcatatcatcaaaaagatatccttaatattctcaaagaaaatcctaatcaagtttcatcttcaaacaatttcttgtttgggacagcctcttcttgttaccagtttgaaggagcatttctcagtgatggaaaaagtctcaacaattgggacatttttactcacgaagctggtcatattgaggatggaagcaatggagatgttgccgttgatcactacaatcgttatttggaggacatcaagctcatggaagacatgggtgtgaatagctatcgtttctccatctcatgggcaagaattctgcccaaggggacatttggagatgttaatatggctggaattgagcactataataagcttattgatgcactcttgcagaaagggattgaaccgtttatcacattaacacattatgacgtaccacaagaacttgaggaaagatatggtggttggcttagttcacgaatacaggatgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacaaccatcaatgagcctaaccttatggctgttcgtggttatagagagggaaacttacctccagctcgatgctccggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="34004" stop="37550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34304" g_stop="34576" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34577" i_stop="34646" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34647" g_stop="34713" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="340" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34714" i_stop="34941" i_length="228">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34942" g_stop="35000" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="399" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35001" i_stop="36589" i_length="1589">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36590" g_stop="36665" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="475" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36666" i_stop="36762" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36763" g_stop="36837" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="550" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="36838" i_stop="36946" i_length="109">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36947" g_stop="37034" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="638" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37035" i_stop="37108" i_length="74">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="37109" g_stop="37250" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="780" r_length="142" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E545385" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34304" e_stop="34576"/>
          <exon e_start="34647" e_stop="34713"/>
          <exon e_start="34942" e_stop="35000"/>
          <exon e_start="36590" e_stop="36665"/>
          <exon e_start="36763" e_stop="36837"/>
          <exon e_start="36947" e_stop="37034"/>
          <exon e_start="37109" e_stop="37250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGGTTGCAATTATTTGTGCCTTTTTCTCAGGAGCTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAGGTACTTCCTACACTTGTTTTTTTTTTTTTTGTTTCGAGTATAACTTTAATTTTTCTTGTTTTCTCCGTAGTTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTGGTGAGCCCCCTTTTTTAAGGCATAATACATTAATTATGACCGTATTTTTACATTTATGTCTCCAACTTTTGGGGGTGCGACACATAAGTCTAAGTGACATAATTTGTTCAATTTTATGTTTATGCATTTTTTTTAATTAATGAATTATCAATTTCTACGAGAAAATTTACAAGAATTTTAGCCCCCGCTTTTTTAAAAAAATATTAATTTTGGTTAGTGTTGTTGCAGGTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTGGTAAATCCAATTTATCATTTGAACTTTCCCTTTTTTATGTAGTTGCAAACATATTGTTCACAAGTCTGTTTTCTTTATTTTTGAACAAATTCAGGTAAGAAAAAGAACACGTGAATATTTGATTCGTGACAGAATAGGTTAAAAATTGTTTGCTCAAATATATAGTGGTAGTAGGACATACTTGTCGCTCTTATATAATAAAAAAAGGTAAAATGTTTTCCTTAGCACTCTACCACTTTCTCTCACCGCTTAAAAAAATATCTACCCACTCCACGTAACACTCTCCTATTTTTTTTTAATCTCATTTTGGGTTATATATATAATTTAGGGAAGTATTTTTTATTTGTTATAAGACTTCCTTTAAAATAAATGAAGAGTGCAGTACACCCACCATAAAGAAAATCTAATGATAGAGACATGTGTTTCTCTCTAACAGATATTGATAATTTATAGTTTAGGTATGAAATTCAAGCTCTCAATAATTCGGGTACGAAGTTAAAAGAAGAAGAAGATAATTAGATATTTTTAACACTTATCTTTATTAATAATCATAATACATATTTTTATAAGCCCCACTAGCAATTCTCTTAATTAATACTCTCTTTGTCTCTATTTACTCGTCTATATTTCCTGTTTTAGATGTTTCCTATTTACTTGTCCATTTTGACAAATCAAGAAAAGATTAAAAAATCCTATTATACCCTCATTTAAACTTCTTGAAAAATTTTAAAAACTTTTAATTCATCCTTTCTGAAATCATATTTAATAAGGTAAAATTGTAACTTTACTATGTTAATTATTGTTATCTTAATATGTGTGCCTAGTCTATAGTGGACAACTAAATAGGGACAGCGGGAGAGTACCTTAGATAAGGAAATAATATTTAATCATGTTATCATTTATATTGTTATTACTGGTAATTAGTATATATTTGGGTTGTGAAAGAATTAGATGTGTTTGACATTTGCTCTCTTTCACATGCTAACATTTTGTACATTTCTGAGATATCAGATGTAGTCATTTTCTTATCCCTGTCATTGTGATTTCTTATCATTTTAAGGCCATTCAGAAGGGTAACATATTCTTGTATGTTTTTATCCTGTTGAGATGGGATCATCTATAGTGAGGCACATTGAGATTAGATGGAGACTAAATATGATTTGGCCTACTCAAGATCAACAAAATAAACTGCTGTCGTTTGTCAACACAATACTGATAAATTAGATAGAAAGTACTTTTGGAGATCAGAATTACATAAACTTTTTGATACAACATCATTCGAGAAGCAAAGGGAAGGCCCTAATTTGTGCTTGAAAGACAGCATACATGTTTGACACAGAAGGGAAACAGTTAGTCTTGCTCTCACAATTAAGATCTAAAACTCACATTCTGTGTCAAAGCTGATCGATCAACATCATAAGGAAGCAGCAGATAAGCGCATGATATGCTTTTGTTGCACAACAAGTCATAAGCGTCTCAGAAGAGTTTATGAATGAATGTTAGATCAATGCAGTGTATTAGCAAGAAAATAGACTGCTCGTAAAGCAAGAATTCTGAATTTCTGATGTTTCGTAATAAAATGAATACAGGAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCAGTACGTCACTACTCTCTTCCCTTCATTTTAAGCAAATAATTCTTATTGTCATTTTGATTGAACCATCTTTCTCTTTGTCGGTTGTAAATTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAGGTCAATTCGGTTGCAGTTGCTTATAGTTTTAAGTTATTGATAATATCAAAATGAAGCAAAAAAGTAAATTTTGGGGCTCAGACGACTTCTTTATGTGCTGTGAATTCAGGGATTGAACCGTTTATCACATTAACACATTATGACGTACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACAGTAAGTAGCTGGTCCCATCTTACACTTTAAGGTAGTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGTTATAGAGAGGGAACTTACCCTCCAGCTCGATGCTCCGGT</genome_strand>
        <mrna_strand>GAAGAGGTTGCAATTATTTGTGCCTTTTTCTCAGGAGCTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAG......................................................................TTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTG....................................................................................................................................................................................................................................GTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCA.................................................................................................AGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAG.............................................................................................................GGATTGAACCGTTTATCACATTAACACATTATGACGTACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACA..........................................................................GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGTTATAGAGAGGGAAACTTACCTCCAGCTCGATGCTCCGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E308712" ref_strand="+" ref_description="SGN-E308712 	[cLEZ-11-E8]">
      <seq>aagaggttgcaattatttgtgcctttttctcaggagcttgaaagagaaatatcaatcaccacttctctctatttttcctcattcacttaacaaatcaaagctgtattatgcttcctgcaatgttttatcaaatagcaatttgcatgttgttttgtggtttcatagtatcatcatatcatcaaaaagatatccttaatattctcaaagaaaatcctaatcaagtttcatcttcaaacaatttcttgtttgggacagcctcttcttgttaccagtttgaaggagcatttctcagtgatggaaaaagtctcaacaattgggacatttttactcacgaagctggtcatattgaggatggaagcaatggagatgttgccgttgatcactacaatcgttatttggaggacatcaagctcatggaagacatgggtgtgaatagctatcgtttctccatctcatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="34005" stop="36950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34305" g_stop="34576" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34577" i_stop="34646" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34647" g_stop="34713" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="339" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34714" i_stop="34941" i_length="228">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34942" g_stop="35000" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="398" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35001" i_stop="36589" i_length="1589">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36590" g_stop="36650" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="459" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E308712" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308712" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34305" e_stop="34576"/>
          <exon e_start="34647" e_stop="34713"/>
          <exon e_start="34942" e_stop="35000"/>
          <exon e_start="36590" e_stop="36650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGGTTGCAATTATTTGTGCCTTTTTCTCAGGAGCTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAGGTACTTCCTACACTTGTTTTTTTTTTTTTTGTTTCGAGTATAACTTTAATTTTTCTTGTTTTCTCCGTAGTTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTGGTGAGCCCCCTTTTTTAAGGCATAATACATTAATTATGACCGTATTTTTACATTTATGTCTCCAACTTTTGGGGGTGCGACACATAAGTCTAAGTGACATAATTTGTTCAATTTTATGTTTATGCATTTTTTTTAATTAATGAATTATCAATTTCTACGAGAAAATTTACAAGAATTTTAGCCCCCGCTTTTTTAAAAAAATATTAATTTTGGTTAGTGTTGTTGCAGGTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTGGTAAATCCAATTTATCATTTGAACTTTCCCTTTTTTATGTAGTTGCAAACATATTGTTCACAAGTCTGTTTTCTTTATTTTTGAACAAATTCAGGTAAGAAAAAGAACACGTGAATATTTGATTCGTGACAGAATAGGTTAAAAATTGTTTGCTCAAATATATAGTGGTAGTAGGACATACTTGTCGCTCTTATATAATAAAAAAAGGTAAAATGTTTTCCTTAGCACTCTACCACTTTCTCTCACCGCTTAAAAAAATATCTACCCACTCCACGTAACACTCTCCTATTTTTTTTTAATCTCATTTTGGGTTATATATATAATTTAGGGAAGTATTTTTTATTTGTTATAAGACTTCCTTTAAAATAAATGAAGAGTGCAGTACACCCACCATAAAGAAAATCTAATGATAGAGACATGTGTTTCTCTCTAACAGATATTGATAATTTATAGTTTAGGTATGAAATTCAAGCTCTCAATAATTCGGGTACGAAGTTAAAAGAAGAAGAAGATAATTAGATATTTTTAACACTTATCTTTATTAATAATCATAATACATATTTTTATAAGCCCCACTAGCAATTCTCTTAATTAATACTCTCTTTGTCTCTATTTACTCGTCTATATTTCCTGTTTTAGATGTTTCCTATTTACTTGTCCATTTTGACAAATCAAGAAAAGATTAAAAAATCCTATTATACCCTCATTTAAACTTCTTGAAAAATTTTAAAAACTTTTAATTCATCCTTTCTGAAATCATATTTAATAAGGTAAAATTGTAACTTTACTATGTTAATTATTGTTATCTTAATATGTGTGCCTAGTCTATAGTGGACAACTAAATAGGGACAGCGGGAGAGTACCTTAGATAAGGAAATAATATTTAATCATGTTATCATTTATATTGTTATTACTGGTAATTAGTATATATTTGGGTTGTGAAAGAATTAGATGTGTTTGACATTTGCTCTCTTTCACATGCTAACATTTTGTACATTTCTGAGATATCAGATGTAGTCATTTTCTTATCCCTGTCATTGTGATTTCTTATCATTTTAAGGCCATTCAGAAGGGTAACATATTCTTGTATGTTTTTATCCTGTTGAGATGGGATCATCTATAGTGAGGCACATTGAGATTAGATGGAGACTAAATATGATTTGGCCTACTCAAGATCAACAAAATAAACTGCTGTCGTTTGTCAACACAATACTGATAAATTAGATAGAAAGTACTTTTGGAGATCAGAATTACATAAACTTTTTGATACAACATCATTCGAGAAGCAAAGGGAAGGCCCTAATTTGTGCTTGAAAGACAGCATACATGTTTGACACAGAAGGGAAACAGTTAGTCTTGCTCTCACAATTAAGATCTAAAACTCACATTCTGTGTCAAAGCTGATCGATCAACATCATAAGGAAGCAGCAGATAAGCGCATGATATGCTTTTGTTGCACAACAAGTCATAAGCGTCTCAGAAGAGTTTATGAATGAATGTTAGATCAATGCAGTGTATTAGCAAGAAAATAGACTGCTCGTAAAGCAAGAATTCTGAATTTCTGATGTTTCGTAATAAAATGAATACAGGAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGG</genome_strand>
        <mrna_strand>AAGAGGTTGCAATTATTTGTGCCTTTTTCTCAGGAGCTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAG......................................................................TTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTG....................................................................................................................................................................................................................................GTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E309465" ref_strand="+" ref_description="SGN-E309465 	[cTOA-2-E2]">
      <seq>gagcttgaaagagaaatatcaatcaccacttctctctatttttcctcattcacttaacaaatcaaagctgtattatgcttcctgcaatgttttatcaaatagcaatttgcatgttgttttgtggtttcatagtatcatcatatcatcaaaaagatatccttaatattctcaaagaaaatcctaatcaagtttcatcttcaaacaatttcttgtttgggacagcctcttcttgttaccagtttgaaggagcatttctcagtgatggaaaaagtctcaacaattgggacatttttactcacgaagctggtcatattgaggatggaagcaatggagatgttgccgttgatcactacaatcgatatttggaggacatcaagctcatggaagacatgggtgtgaatagctatcgattctccatctcatgggcaagaattctgcccaaagggacatttggagatgttaatatggctggaattgagcactataataagcttattgatgcactcttgcagaaagggattgaaccgtttatcacattaacacattatgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="34038" stop="37282"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34338" g_stop="34576" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34577" i_stop="34646" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34647" g_stop="34713" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="306" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34714" i_stop="34941" i_length="228">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34942" g_stop="35000" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="365" r_length="59" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35001" i_stop="36589" i_length="1589">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36590" g_stop="36665" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="441" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36666" i_stop="36762" i_length="97">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36763" g_stop="36837" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="442" r_stop="516" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="36838" i_stop="36946" i_length="109">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36947" g_stop="36982" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="552" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E309465" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34338" e_stop="34576"/>
          <exon e_start="34647" e_stop="34713"/>
          <exon e_start="34942" e_stop="35000"/>
          <exon e_start="36590" e_stop="36665"/>
          <exon e_start="36763" e_stop="36837"/>
          <exon e_start="36947" e_stop="36982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAGGTACTTCCTACACTTGTTTTTTTTTTTTTTGTTTCGAGTATAACTTTAATTTTTCTTGTTTTCTCCGTAGTTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTGGTGAGCCCCCTTTTTTAAGGCATAATACATTAATTATGACCGTATTTTTACATTTATGTCTCCAACTTTTGGGGGTGCGACACATAAGTCTAAGTGACATAATTTGTTCAATTTTATGTTTATGCATTTTTTTTAATTAATGAATTATCAATTTCTACGAGAAAATTTACAAGAATTTTAGCCCCCGCTTTTTTAAAAAAATATTAATTTTGGTTAGTGTTGTTGCAGGTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTGGTAAATCCAATTTATCATTTGAACTTTCCCTTTTTTATGTAGTTGCAAACATATTGTTCACAAGTCTGTTTTCTTTATTTTTGAACAAATTCAGGTAAGAAAAAGAACACGTGAATATTTGATTCGTGACAGAATAGGTTAAAAATTGTTTGCTCAAATATATAGTGGTAGTAGGACATACTTGTCGCTCTTATATAATAAAAAAAGGTAAAATGTTTTCCTTAGCACTCTACCACTTTCTCTCACCGCTTAAAAAAATATCTACCCACTCCACGTAACACTCTCCTATTTTTTTTTAATCTCATTTTGGGTTATATATATAATTTAGGGAAGTATTTTTTATTTGTTATAAGACTTCCTTTAAAATAAATGAAGAGTGCAGTACACCCACCATAAAGAAAATCTAATGATAGAGACATGTGTTTCTCTCTAACAGATATTGATAATTTATAGTTTAGGTATGAAATTCAAGCTCTCAATAATTCGGGTACGAAGTTAAAAGAAGAAGAAGATAATTAGATATTTTTAACACTTATCTTTATTAATAATCATAATACATATTTTTATAAGCCCCACTAGCAATTCTCTTAATTAATACTCTCTTTGTCTCTATTTACTCGTCTATATTTCCTGTTTTAGATGTTTCCTATTTACTTGTCCATTTTGACAAATCAAGAAAAGATTAAAAAATCCTATTATACCCTCATTTAAACTTCTTGAAAAATTTTAAAAACTTTTAATTCATCCTTTCTGAAATCATATTTAATAAGGTAAAATTGTAACTTTACTATGTTAATTATTGTTATCTTAATATGTGTGCCTAGTCTATAGTGGACAACTAAATAGGGACAGCGGGAGAGTACCTTAGATAAGGAAATAATATTTAATCATGTTATCATTTATATTGTTATTACTGGTAATTAGTATATATTTGGGTTGTGAAAGAATTAGATGTGTTTGACATTTGCTCTCTTTCACATGCTAACATTTTGTACATTTCTGAGATATCAGATGTAGTCATTTTCTTATCCCTGTCATTGTGATTTCTTATCATTTTAAGGCCATTCAGAAGGGTAACATATTCTTGTATGTTTTTATCCTGTTGAGATGGGATCATCTATAGTGAGGCACATTGAGATTAGATGGAGACTAAATATGATTTGGCCTACTCAAGATCAACAAAATAAACTGCTGTCGTTTGTCAACACAATACTGATAAATTAGATAGAAAGTACTTTTGGAGATCAGAATTACATAAACTTTTTGATACAACATCATTCGAGAAGCAAAGGGAAGGCCCTAATTTGTGCTTGAAAGACAGCATACATGTTTGACACAGAAGGGAAACAGTTAGTCTTGCTCTCACAATTAAGATCTAAAACTCACATTCTGTGTCAAAGCTGATCGATCAACATCATAAGGAAGCAGCAGATAAGCGCATGATATGCTTTTGTTGCACAACAAGTCATAAGCGTCTCAGAAGAGTTTATGAATGAATGTTAGATCAATGCAGTGTATTAGCAAGAAAATAGACTGCTCGTAAAGCAAGAATTCTGAATTTCTGATGTTTCGTAATAAAATGAATACAGGAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCAGTACGTCACTACTCTCTTCCCTTCATTTTAAGCAAATAATTCTTATTGTCATTTTGATTGAACCATCTTTCTCTTTGTCGGTTGTAAATTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAGGTCAATTCGGTTGCAGTTGCTTATAGTTTTAAGTTATTGATAATATCAAAATGAAGCAAAAAAGTAAATTTTGGGGCTCAGACGACTTCTTTATGTGCTGTGAATTCAGGGATTGAACCGTTTATCACATTAACACATTATGACG</genome_strand>
        <mrna_strand>GAGCTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAG......................................................................TTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTG....................................................................................................................................................................................................................................GTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGATATTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGATTCTCCATCTCATGGGCAAGAATTCTGCCCA.................................................................................................AAGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAG.............................................................................................................GGATTGAACCGTTTATCACATTAACACATTATGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E315210" ref_strand="+" ref_description="SGN-E315210 	[cTOA-24-L4]">
      <seq>cttgaaagagaaatatcaatcaccacttctctctatttttcctcattcacttaacaaatcaaagctgtattatgcttcctgcaatgttttatcaaatagcaatttgcatgttgttttgtggtttcatagtatcatcatatcatcaaaaagatatccttaatattctcaaagaaaatcctaatcaagtttcatcttcaaacaatttcttgtttgggacagcctcttcttgttaccagtttgaaggagcatttctcagtgatggaaaaagtctcaacaattgggacatttttactcacgaagctggtcatattgaggatggaagcaatggagatgttgccgttgatcactacaatcgttatttggaggacatcaagctcatggaagacatgggtgtgaatagctatcgtttctccatctcatgggcaagaattctgcccaaggggacatttggagatgttaatatggctggaattgagcactataataagcttattgatgcactcttgcagaaagggattgaaccgtttatcacattaacacattatgacgtaccacaagaacttgaggaaagatatggtggttggcttagttcacgaatacaggatgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacnaccatcaatgagcctaaccttatggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="34041" stop="37501"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34341" g_stop="34576" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34577" i_stop="34646" i_length="70">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34647" g_stop="34713" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="303" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34714" i_stop="34941" i_length="228">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34942" g_stop="35000" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="362" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35001" i_stop="36589" i_length="1589">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36590" g_stop="36665" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="438" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36666" i_stop="36762" i_length="97">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36763" g_stop="36837" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="513" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="36838" i_stop="36946" i_length="109">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.763" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36947" g_stop="37034" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="601" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37035" i_stop="37108" i_length="74">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="37109" g_stop="37201" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="694" r_length="93" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E315210" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315210" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34341" e_stop="34576"/>
          <exon e_start="34647" e_stop="34713"/>
          <exon e_start="34942" e_stop="35000"/>
          <exon e_start="36590" e_stop="36665"/>
          <exon e_start="36763" e_stop="36837"/>
          <exon e_start="36947" e_stop="37034"/>
          <exon e_start="37109" e_stop="37201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAGGTACTTCCTACACTTGTTTTTTTTTTTTTTGTTTCGAGTATAACTTTAATTTTTCTTGTTTTCTCCGTAGTTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTGGTGAGCCCCCTTTTTTAAGGCATAATACATTAATTATGACCGTATTTTTACATTTATGTCTCCAACTTTTGGGGGTGCGACACATAAGTCTAAGTGACATAATTTGTTCAATTTTATGTTTATGCATTTTTTTTAATTAATGAATTATCAATTTCTACGAGAAAATTTACAAGAATTTTAGCCCCCGCTTTTTTAAAAAAATATTAATTTTGGTTAGTGTTGTTGCAGGTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTGGTAAATCCAATTTATCATTTGAACTTTCCCTTTTTTATGTAGTTGCAAACATATTGTTCACAAGTCTGTTTTCTTTATTTTTGAACAAATTCAGGTAAGAAAAAGAACACGTGAATATTTGATTCGTGACAGAATAGGTTAAAAATTGTTTGCTCAAATATATAGTGGTAGTAGGACATACTTGTCGCTCTTATATAATAAAAAAAGGTAAAATGTTTTCCTTAGCACTCTACCACTTTCTCTCACCGCTTAAAAAAATATCTACCCACTCCACGTAACACTCTCCTATTTTTTTTTAATCTCATTTTGGGTTATATATATAATTTAGGGAAGTATTTTTTATTTGTTATAAGACTTCCTTTAAAATAAATGAAGAGTGCAGTACACCCACCATAAAGAAAATCTAATGATAGAGACATGTGTTTCTCTCTAACAGATATTGATAATTTATAGTTTAGGTATGAAATTCAAGCTCTCAATAATTCGGGTACGAAGTTAAAAGAAGAAGAAGATAATTAGATATTTTTAACACTTATCTTTATTAATAATCATAATACATATTTTTATAAGCCCCACTAGCAATTCTCTTAATTAATACTCTCTTTGTCTCTATTTACTCGTCTATATTTCCTGTTTTAGATGTTTCCTATTTACTTGTCCATTTTGACAAATCAAGAAAAGATTAAAAAATCCTATTATACCCTCATTTAAACTTCTTGAAAAATTTTAAAAACTTTTAATTCATCCTTTCTGAAATCATATTTAATAAGGTAAAATTGTAACTTTACTATGTTAATTATTGTTATCTTAATATGTGTGCCTAGTCTATAGTGGACAACTAAATAGGGACAGCGGGAGAGTACCTTAGATAAGGAAATAATATTTAATCATGTTATCATTTATATTGTTATTACTGGTAATTAGTATATATTTGGGTTGTGAAAGAATTAGATGTGTTTGACATTTGCTCTCTTTCACATGCTAACATTTTGTACATTTCTGAGATATCAGATGTAGTCATTTTCTTATCCCTGTCATTGTGATTTCTTATCATTTTAAGGCCATTCAGAAGGGTAACATATTCTTGTATGTTTTTATCCTGTTGAGATGGGATCATCTATAGTGAGGCACATTGAGATTAGATGGAGACTAAATATGATTTGGCCTACTCAAGATCAACAAAATAAACTGCTGTCGTTTGTCAACACAATACTGATAAATTAGATAGAAAGTACTTTTGGAGATCAGAATTACATAAACTTTTTGATACAACATCATTCGAGAAGCAAAGGGAAGGCCCTAATTTGTGCTTGAAAGACAGCATACATGTTTGACACAGAAGGGAAACAGTTAGTCTTGCTCTCACAATTAAGATCTAAAACTCACATTCTGTGTCAAAGCTGATCGATCAACATCATAAGGAAGCAGCAGATAAGCGCATGATATGCTTTTGTTGCACAACAAGTCATAAGCGTCTCAGAAGAGTTTATGAATGAATGTTAGATCAATGCAGTGTATTAGCAAGAAAATAGACTGCTCGTAAAGCAAGAATTCTGAATTTCTGATGTTTCGTAATAAAATGAATACAGGAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCAGTACGTCACTACTCTCTTCCCTTCATTTTAAGCAAATAATTCTTATTGTCATTTTGATTGAACCATCTTTCTCTTTGTCGGTTGTAAATTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAGGTCAATTCGGTTGCAGTTGCTTATAGTTTTAAGTTATTGATAATATCAAAATGAAGCAAAAAAGTAAATTTTGGGGCTCAGACGACTTCTTTATGTGCTGTGAATTCAGGGATTGAACCGTTTATCACATTAACACATTATGACGTACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACAGTAAGTAGCTGGTCCCATCTTACACTTTAAGGTAGTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGC</genome_strand>
        <mrna_strand>CTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAG......................................................................TTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTG....................................................................................................................................................................................................................................GTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCA.................................................................................................AGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAG.............................................................................................................GGATTGAACCGTTTATCACATTAACACATTATGACGTACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACA..........................................................................GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACNACCATCAATGAGCCTAACCTTATGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E588158" ref_strand="+" ref_description="SGN-E588158 	[41704]">
      <seq>gagaaatatcaagtagcacttgtctctgtttttcctctttcacttaacaaatcaaagctacaatgttttatcacatagcaatttgcattttgttttatggtttcatagtatcatcatgtcatcaaacacacaaccttaatattcttgctaaccaagttacatcttcaagcaatttcttgtttggaacagcctcttcttgttaccagtatgaaggagctattctcagtgatggaaaaggtctcaacaattgggacgtttttactcatgaagctggtcatattaaagatggaagcaatggagatgttgctgttgatcactacaatcgttatttggaggatgtcaagctcatggaagacatgggcgtgaatagctatcgtttctccatctcatgggcaagaattctgcccaaggggacatttggagatgttaacatggctggaattgaacactataataagcttattgatgcactcctacaaaaagggatccaaccttttatcacattaactcattatgacataccacaagaacttgaggaaagatatggtggttggctgagttcacgaatacaggatgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacaaccatcaatgagcctaacgtcatggctgtatatggctatagactaggaacttaccctccagctcgatgctccggtatatttgggaactgtagtgctggtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="34048" stop="37577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34348" g_stop="34576" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.817"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34577" i_stop="34646" i_length="70">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34647" g_stop="34713" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="273" r_length="67" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34714" i_stop="34941" i_length="228">
            <donor d_prob="0.993" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34942" g_stop="35000" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="332" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35001" i_stop="36589" i_length="1589">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36590" g_stop="36665" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="408" r_length="76" r_score="0.961"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36666" i_stop="36762" i_length="97">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36763" g_stop="36837" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="483" r_length="75" r_score="0.933"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="36838" i_stop="36946" i_length="109">
            <donor d_prob="0.883" d_score="0.92"/>
            <acceptor a_prob="0.763" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36947" g_stop="37034" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="571" r_length="88" r_score="0.932"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37035" i_stop="37108" i_length="74">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="37109" g_stop="37277" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="740" r_length="169" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E588158" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.031" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E588158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34348" e_stop="34576"/>
          <exon e_start="34647" e_stop="34713"/>
          <exon e_start="34942" e_stop="35000"/>
          <exon e_start="36590" e_stop="36665"/>
          <exon e_start="36763" e_stop="36837"/>
          <exon e_start="36947" e_stop="37034"/>
          <exon e_start="37109" e_stop="37277"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAGGTACTTCCTACACTTGTTTTTTTTTTTTTTGTTTCGAGTATAACTTTAATTTTTCTTGTTTTCTCCGTAGTTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTGGTGAGCCCCCTTTTTTAAGGCATAATACATTAATTATGACCGTATTTTTACATTTATGTCTCCAACTTTTGGGGGTGCGACACATAAGTCTAAGTGACATAATTTGTTCAATTTTATGTTTATGCATTTTTTTTAATTAATGAATTATCAATTTCTACGAGAAAATTTACAAGAATTTTAGCCCCCGCTTTTTTAAAAAAATATTAATTTTGGTTAGTGTTGTTGCAGGTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTGGTAAATCCAATTTATCATTTGAACTTTCCCTTTTTTATGTAGTTGCAAACATATTGTTCACAAGTCTGTTTTCTTTATTTTTGAACAAATTCAGGTAAGAAAAAGAACACGTGAATATTTGATTCGTGACAGAATAGGTTAAAAATTGTTTGCTCAAATATATAGTGGTAGTAGGACATACTTGTCGCTCTTATATAATAAAAAAAGGTAAAATGTTTTCCTTAGCACTCTACCACTTTCTCTCACCGCTTAAAAAAATATCTACCCACTCCACGTAACACTCTCCTATTTTTTTTTAATCTCATTTTGGGTTATATATATAATTTAGGGAAGTATTTTTTATTTGTTATAAGACTTCCTTTAAAATAAATGAAGAGTGCAGTACACCCACCATAAAGAAAATCTAATGATAGAGACATGTGTTTCTCTCTAACAGATATTGATAATTTATAGTTTAGGTATGAAATTCAAGCTCTCAATAATTCGGGTACGAAGTTAAAAGAAGAAGAAGATAATTAGATATTTTTAACACTTATCTTTATTAATAATCATAATACATATTTTTATAAGCCCCACTAGCAATTCTCTTAATTAATACTCTCTTTGTCTCTATTTACTCGTCTATATTTCCTGTTTTAGATGTTTCCTATTTACTTGTCCATTTTGACAAATCAAGAAAAGATTAAAAAATCCTATTATACCCTCATTTAAACTTCTTGAAAAATTTTAAAAACTTTTAATTCATCCTTTCTGAAATCATATTTAATAAGGTAAAATTGTAACTTTACTATGTTAATTATTGTTATCTTAATATGTGTGCCTAGTCTATAGTGGACAACTAAATAGGGACAGCGGGAGAGTACCTTAGATAAGGAAATAATATTTAATCATGTTATCATTTATATTGTTATTACTGGTAATTAGTATATATTTGGGTTGTGAAAGAATTAGATGTGTTTGACATTTGCTCTCTTTCACATGCTAACATTTTGTACATTTCTGAGATATCAGATGTAGTCATTTTCTTATCCCTGTCATTGTGATTTCTTATCATTTTAAGGCCATTCAGAAGGGTAACATATTCTTGTATGTTTTTATCCTGTTGAGATGGGATCATCTATAGTGAGGCACATTGAGATTAGATGGAGACTAAATATGATTTGGCCTACTCAAGATCAACAAAATAAACTGCTGTCGTTTGTCAACACAATACTGATAAATTAGATAGAAAGTACTTTTGGAGATCAGAATTACATAAACTTTTTGATACAACATCATTCGAGAAGCAAAGGGAAGGCCCTAATTTGTGCTTGAAAGACAGCATACATGTTTGACACAGAAGGGAAACAGTTAGTCTTGCTCTCACAATTAAGATCTAAAACTCACATTCTGTGTCAAAGCTGATCGATCAACATCATAAGGAAGCAGCAGATAAGCGCATGATATGCTTTTGTTGCACAACAAGTCATAAGCGTCTCAGAAGAGTTTATGAATGAATGTTAGATCAATGCAGTGTATTAGCAAGAAAATAGACTGCTCGTAAAGCAAGAATTCTGAATTTCTGATGTTTCGTAATAAAATGAATACAGGAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCAGTACGTCACTACTCTCTTCCCTTCATTTTAAGCAAATAATTCTTATTGTCATTTTGATTGAACCATCTTTCTCTTTGTCGGTTGTAAATTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAGGTCAATTCGGTTGCAGTTGCTTATAGTTTTAAGTTATTGATAATATCAAAATGAAGCAAAAAAGTAAATTTTGGGGCTCAGACGACTTCTTTATGTGCTGTGAATTCAGGGATTGAACCGTTTATCACATTAACACATTATGACGTACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACAGTAAGTAGCTGGTCCCATCTTACACTTTAAGGTAGTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGTTATAGAGAGGGAACTTACCCTCCAGCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGAT</genome_strand>
        <mrna_strand>GAGAAATATCAAGTAGCACTTGTCTCTGTTTTTCCTCTTTCACTTAACAAATCAAAGC-----TA---------CAATGTTTTATCACATAGCAATTTGCATTTTGTTTTATGGTTTCATAGTATCATCATGTCATCAAACACACAACCTTAATATTCT---TG-----C-TAACCAAGTTACATCTTCAAGCAATTTCTTGTTTGGAACAGCCTCTTCTTGTTACCAG......................................................................TATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGACGTTTTTACTCATGAAGCTG....................................................................................................................................................................................................................................GTCATATTAAAGATGGAAGCAATGGAGATGTTGCTGTTGATCACTACAATCGTTATTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATGTCAAGCTCATGGAAGACATGGGCGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCA.................................................................................................AGGGGACATTTGGAGATGTTAACATGGCTGGAATTGAACACTATAATAAGCTTATTGATGCACTCCTACAAAAAG.............................................................................................................GGATCCAACCTTTTATCACATTAACTCATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTGAGTTCACGAATACA..........................................................................GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACGTCATGGCTGTATATGGCTATAGACTAGGAACTTACCCTCCAGCTCGATGCTCCGGTATATTTGGGAACTGTAGTGCTGGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E606499" ref_strand="+" ref_description="SGN-E606499 	[22444]">
      <seq>agcaatttgcatttgttttatggttcatagtatcatcatgtcatcaaacacacaaccttaatattcttgctaaccaagttacatcttcaagcaatttcttgtctggaacagcctcttcttgttaccagtatgaaggagctattctcagtgatggaaaaggtctcaacaattgggacgtttttactcatgaagctggtcatattaaagatggaagcaatggagatgttgctgttgatcactacaatcgttatttggaggatgtcaagctcatggaagacatgggcgtgaatagctatcgtttctccatctcatgggcaagaattctgcccaaggggacatttggagatgttaacatggctggaattgaacactataataagcttattgatgcactcctacaaaaagggatccaaccttttatcacattaactcattatgacataccacaagaacttgaggaaagatatggtggttggctgagttcacgaatacaggatgatttcagctattatgcagacatatgcttcaaatattttggggacagagtcaaatactggacaaccatcaatgagcctaacgtcatggctgtatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="34138" stop="37504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34438" g_stop="34576" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.835"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34577" i_stop="34646" i_length="70">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34647" g_stop="34713" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="195" r_length="67" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="34714" i_stop="34941" i_length="228">
            <donor d_prob="0.993" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="34942" g_stop="35000" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="254" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="35001" i_stop="36589" i_length="1589">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="36590" g_stop="36665" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="330" r_length="76" r_score="0.961"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36666" i_stop="36762" i_length="97">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36763" g_stop="36837" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="405" r_length="75" r_score="0.933"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="36838" i_stop="36946" i_length="109">
            <donor d_prob="0.883" d_score="0.92"/>
            <acceptor a_prob="0.763" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36947" g_stop="37034" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="493" r_length="88" r_score="0.932"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37035" i_stop="37108" i_length="74">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="37109" g_stop="37208" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="593" r_length="100" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E606499" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.019" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E606499" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34438" e_stop="34576"/>
          <exon e_start="34647" e_stop="34713"/>
          <exon e_start="34942" e_stop="35000"/>
          <exon e_start="36590" e_stop="36665"/>
          <exon e_start="36763" e_stop="36837"/>
          <exon e_start="36947" e_stop="37034"/>
          <exon e_start="37109" e_stop="37208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAGGTACTTCCTACACTTGTTTTTTTTTTTTTTGTTTCGAGTATAACTTTAATTTTTCTTGTTTTCTCCGTAGTTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTGGTGAGCCCCCTTTTTTAAGGCATAATACATTAATTATGACCGTATTTTTACATTTATGTCTCCAACTTTTGGGGGTGCGACACATAAGTCTAAGTGACATAATTTGTTCAATTTTATGTTTATGCATTTTTTTTAATTAATGAATTATCAATTTCTACGAGAAAATTTACAAGAATTTTAGCCCCCGCTTTTTTAAAAAAATATTAATTTTGGTTAGTGTTGTTGCAGGTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTGGTAAATCCAATTTATCATTTGAACTTTCCCTTTTTTATGTAGTTGCAAACATATTGTTCACAAGTCTGTTTTCTTTATTTTTGAACAAATTCAGGTAAGAAAAAGAACACGTGAATATTTGATTCGTGACAGAATAGGTTAAAAATTGTTTGCTCAAATATATAGTGGTAGTAGGACATACTTGTCGCTCTTATATAATAAAAAAAGGTAAAATGTTTTCCTTAGCACTCTACCACTTTCTCTCACCGCTTAAAAAAATATCTACCCACTCCACGTAACACTCTCCTATTTTTTTTTAATCTCATTTTGGGTTATATATATAATTTAGGGAAGTATTTTTTATTTGTTATAAGACTTCCTTTAAAATAAATGAAGAGTGCAGTACACCCACCATAAAGAAAATCTAATGATAGAGACATGTGTTTCTCTCTAACAGATATTGATAATTTATAGTTTAGGTATGAAATTCAAGCTCTCAATAATTCGGGTACGAAGTTAAAAGAAGAAGAAGATAATTAGATATTTTTAACACTTATCTTTATTAATAATCATAATACATATTTTTATAAGCCCCACTAGCAATTCTCTTAATTAATACTCTCTTTGTCTCTATTTACTCGTCTATATTTCCTGTTTTAGATGTTTCCTATTTACTTGTCCATTTTGACAAATCAAGAAAAGATTAAAAAATCCTATTATACCCTCATTTAAACTTCTTGAAAAATTTTAAAAACTTTTAATTCATCCTTTCTGAAATCATATTTAATAAGGTAAAATTGTAACTTTACTATGTTAATTATTGTTATCTTAATATGTGTGCCTAGTCTATAGTGGACAACTAAATAGGGACAGCGGGAGAGTACCTTAGATAAGGAAATAATATTTAATCATGTTATCATTTATATTGTTATTACTGGTAATTAGTATATATTTGGGTTGTGAAAGAATTAGATGTGTTTGACATTTGCTCTCTTTCACATGCTAACATTTTGTACATTTCTGAGATATCAGATGTAGTCATTTTCTTATCCCTGTCATTGTGATTTCTTATCATTTTAAGGCCATTCAGAAGGGTAACATATTCTTGTATGTTTTTATCCTGTTGAGATGGGATCATCTATAGTGAGGCACATTGAGATTAGATGGAGACTAAATATGATTTGGCCTACTCAAGATCAACAAAATAAACTGCTGTCGTTTGTCAACACAATACTGATAAATTAGATAGAAAGTACTTTTGGAGATCAGAATTACATAAACTTTTTGATACAACATCATTCGAGAAGCAAAGGGAAGGCCCTAATTTGTGCTTGAAAGACAGCATACATGTTTGACACAGAAGGGAAACAGTTAGTCTTGCTCTCACAATTAAGATCTAAAACTCACATTCTGTGTCAAAGCTGATCGATCAACATCATAAGGAAGCAGCAGATAAGCGCATGATATGCTTTTGTTGCACAACAAGTCATAAGCGTCTCAGAAGAGTTTATGAATGAATGTTAGATCAATGCAGTGTATTAGCAAGAAAATAGACTGCTCGTAAAGCAAGAATTCTGAATTTCTGATGTTTCGTAATAAAATGAATACAGGAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCAGTACGTCACTACTCTCTTCCCTTCATTTTAAGCAAATAATTCTTATTGTCATTTTGATTGAACCATCTTTCTCTTTGTCGGTTGTAAATTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAGGTCAATTCGGTTGCAGTTGCTTATAGTTTTAAGTTATTGATAATATCAAAATGAAGCAAAAAAGTAAATTTTGGGGCTCAGACGACTTCTTTATGTGCTGTGAATTCAGGGATTGAACCGTTTATCACATTAACACATTATGACGTACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACAGTAAGTAGCTGGTCCCATCTTACACTTTAAGGTAGTTGTATATGATGAACAAGTTAACTTGTGTGGTGTTTCAGGGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGT</genome_strand>
        <mrna_strand>AGCAATTTGCAT-TTGTTTTATGGT-TCATAGTATCATCATGTCATCAAACACACAACCTTAATATTCT---------TGCTAACCAAGTTACATCTTCAAGCAATTTCTTGTCTGGAACAGCCTCTTCTTGTTACCAG......................................................................TATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGACGTTTTTACTCATGAAGCTG....................................................................................................................................................................................................................................GTCATATTAAAGATGGAAGCAATGGAGATGTTGCTGTTGATCACTACAATCGTTATTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATGTCAAGCTCATGGAAGACATGGGCGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCA.................................................................................................AGGGGACATTTGGAGATGTTAACATGGCTGGAATTGAACACTATAATAAGCTTATTGATGCACTCCTACAAAAAG.............................................................................................................GGATCCAACCTTTTATCACATTAACTCATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTGAGTTCACGAATACA..........................................................................GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACGTCATGGCTGTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E549198" ref_strand="-" ref_description="SGN-E549198 	[TUS-68-D8]">
      <seq>taggaagatatcccaaagaaatggttcaaattctgggatctaatctgccagacttctcaaagaatgatttgagcaagctgagttatggcttagatttcattggcatcaattactatacggctaaatatatcaaagattgcttatattctgcctgtgaacatggaaacacttggtcagagggttcctatttagctacaacagaaaaagacggtgtctacattggccaaccaactggtgctccatggatctttctgtacccacaagggatgaaaaaaattgtgatgtacatgagggagagattcaataatactccagtggttatcactgaaaatggcattgctgagaatgataatctgaatccttcaataacggacaccttgaatgatagtcatagagtgaactatttgtatagctgcttaaattcactggcaaatgcaatcagggaaggtgcagacgtgagggggtactttgtttggtcccttcttgacaactttgagtggctacacggatataagctaagatttggacttcactatgtcaactatactaatctccagagaaccccaaaattatcagctaccaggtataaacaactcatgtataacttccacatacagcttgaaacacatattgcccagaactagtggaagaagatgatgcaaaagcagaagcttgtaagcagcctcatccctgccttcatattacaagagttaagctcaaatttaaccttgtattcactccaatggaactgtaatcacgtaagcaagaaattttaattatgcagcagaaatattctgttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="37607" stop="39237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37907" g_stop="38136" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38137" i_stop="38235" i_length="99">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38236" g_stop="38338" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="333" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38339" i_stop="38467" i_length="129">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38468" g_stop="38937" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="803" r_length="470" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="804" polyA_stop="813"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E549198" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549198" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="37907" e_stop="38136"/>
          <exon e_start="38236" e_stop="38338"/>
          <exon e_start="38468" e_stop="38937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGAAGATATCCCAAAGAAATGGTTCAAATTCTGGGATCTAATCTGCCAGACTTCTCAAAGAATGATTTGAGCAAGCTGAGTTATGGCTTAGATTTCATTGGCATCAATTACTATACGGCTAAATATATCAAAGATTGCTTATATTCTGCCTGTGAACATGGAAACACTTGGTCAGAGGGTTCCTATTTAGCTACAACAGAAAAAGACGGTGTCTACATTGGCCAACCAGTATGTTTTCTCATCTATGTTTTCTCATCTTTTAACCCACTCTAGCACTTTCCACATTGCTGAAATTTTATTTTTTTCCACTAACTTTAAATGAATCAGACTGGTGCTCCATGGATCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAGGGAGAGATTCAATAATACTCCAGTGGTTATCACTGAAAATGGTAAGAAGAAAAGGAATTCACACTGTCATTTAGAAGCTAAGAAAGATGCAGTTTATCAACTAATAACTTGAACGAGATGCATTTTGATCTGTTGGGATGCTACTATTGACACAATTGGCTATGTTGCAGGCATTGCTGAGAATGATAATCTGAATCCTTCAATAACGGACACCTTGAATGATAGTCATAGAGTGAACTATTTGTATAGCTGCTTAAATTCACTGGCAAATGCAATCAGGGAAGGTGCAGACGTGAGGGGGTACTTTGTTTGGTCCCTTCTTGACAACTTTGAGTGGCTACACGGATATAAGCTAAGATTTGGACTTCACTATGTCAACTATACTAATCTCCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAACTCATGTATAACTTCCACATACAGCTTGAAACACATATTGCCCAGAACTAGTGGAAGAAGATGATGCAAAAGCAGAAGCTTGTAAGCAGCCTCATCCCTGCCTTCATATTACAAGAGTTAAGCTCAAATTTAACCTTGTATTCACTCCAATGGAACTGTAATCACGTAAGCAAGAAATTTTAATTATGCAGCAGAAATATTCTGTTGAAA</genome_strand>
        <mrna_strand>TAGGAAGATATCCCAAAGAAATGGTTCAAATTCTGGGATCTAATCTGCCAGACTTCTCAAAGAATGATTTGAGCAAGCTGAGTTATGGCTTAGATTTCATTGGCATCAATTACTATACGGCTAAATATATCAAAGATTGCTTATATTCTGCCTGTGAACATGGAAACACTTGGTCAGAGGGTTCCTATTTAGCTACAACAGAAAAAGACGGTGTCTACATTGGCCAACCA...................................................................................................ACTGGTGCTCCATGGATCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAGGGAGAGATTCAATAATACTCCAGTGGTTATCACTGAAAATG.................................................................................................................................GCATTGCTGAGAATGATAATCTGAATCCTTCAATAACGGACACCTTGAATGATAGTCATAGAGTGAACTATTTGTATAGCTGCTTAAATTCACTGGCAAATGCAATCAGGGAAGGTGCAGACGTGAGGGGGTACTTTGTTTGGTCCCTTCTTGACAACTTTGAGTGGCTACACGGATATAAGCTAAGATTTGGACTTCACTATGTCAACTATACTAATCTCCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAACTCATGTATAACTTCCACATACAGCTTGAAACACATATTGCCCAGAACTAGTGGAAGAAGATGATGCAAAAGCAGAAGCTTGTAAGCAGCCTCATCCCTGCCTTCATATTACAAGAGTTAAGCTCAAATTTAACCTTGTATTCACTCCAATGGAACTGTAATCACGTAAGCAAGAAATTTTAATTATGCAGCAGAAATATTCTGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E326854" ref_strand="+" ref_description="SGN-E326854 	[cTOC-25-A10]">
      <seq>tgtagttgtggagtagtcttgaactatgaaaaggtgggtaatataccaggatgttgatgaggaattcacggacacatttcggtcatttgaaggtaccccataccttatcctactctcggagtttctaaagcaatggtctgcagataaggtagtcttcccttgaccaaggatcttattgtagtagtagagcatgtcttcagggtctcattttgaggaatgtaaatacaatgtgctgtcataaatagcatttttggctgatgttgtaacactaatttcgtgaagacaatggaaaaaatagtggcagtgagtttgttataatagtccatgcttcttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="39746" stop="38806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39446" g_stop="39100" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E326854" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39446" e_stop="39100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAATATAACTTTTC</genome_strand>
        <mrna_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E326867" ref_strand="+" ref_description="SGN-E326867 	[cTOC-25-G10]">
      <seq>tgtagttgtggagtagtcttgaactatgaaaaggtgggtaatataccaggatgttgatgaggaattcacggacacatttcggtcatttgaaggtaccccataccttatcctactctcggagtttctaaagcaatggtctgcagataaggtagtcttcccttgaccaaggatcttattgtagtagtagagcatgtcttcagggtctcattttgaggaatgtaaatacaatgtgctgtcataaatagcatttttggctgatgttgtaacactaatttcgtgaagacaatggaaaaaatagtggcagtgagtttgttataatagtccatgcttcttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="39746" stop="38806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39446" g_stop="39100" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E326867" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E326867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39446" e_stop="39100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAATATAACTTTTC</genome_strand>
        <mrna_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E327182" ref_strand="+" ref_description="SGN-E327182 	[cTOC-18-F18]">
      <seq>tgtagttgtggagtagtcttgaactatgaaaaggtgggtaatataccaggatgttgatgaggaattcacggacacatttcggtcatttgaaggtaccccataccttatcctactctcggagtttctaaagcaatggtctgcagataaggtagtcttcccttgaccaaggatcttattgtagtagtagagcatgtcttcagggtctcattttgaggaatgtaaatacaatgtgctgtcataaatagcatttttggctgatgttgtaacactaatttcgtgaagacaatggaaaaaatagtggcagtgagtttgttataatagtccatgcttcttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="39746" stop="38806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39446" g_stop="39100" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E327182" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39446" e_stop="39100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAATATAACTTTTC</genome_strand>
        <mrna_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E327190" ref_strand="+" ref_description="SGN-E327190 	[cTOC-18-N10]">
      <seq>tgtagttgtggagtagtcttgaactatgaaaaggtgggtaatataccaggatgttgatgaggaattcacggacacatttcggtcatttgaaggtaccccataccttatcctactctcggagtttctaaagcaatggtctgcagataaggtagtcttcccttgaccaaggatcttattgtagtagtagagcatgtcttcagggtctcattttgaggaatgtaaatacaatgtgctgtcataaatagcatttttggctgatgttgtaacactaatttcgtgaagacaatggaaaaaatagtggcagtgagtttgttataatagtccatgcttcttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="39746" stop="38806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39446" g_stop="39100" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E327190" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39446" e_stop="39100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAATATAACTTTTC</genome_strand>
        <mrna_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E329030" ref_strand="+" ref_description="SGN-E329030 	[cTOC-24-E24]">
      <seq>tgtagttgtggagtagtcttgaactatgaaaaggtgggtaatataccaggatgttgatgaggaattcacggacacatttcggtcatttgaaggtaccccataccttatcctactctcggagtttctaaagcaatggtctgcagataaggtagtcttcccttgaccaaggatcttattgtagtagtagagcatgtcttcagggtctcattttgaggaatgtaaatacaatgtgctgtcataaatagcatttttggctgatgttgtaacactaatttcgtgaagacaatggaaaaaatagtggcagtgagtttgttataatagtccatgcttcttgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="39746" stop="38806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39446" g_stop="39100" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E329030" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39446" e_stop="39100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAATATAACTTTTC</genome_strand>
        <mrna_strand>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E343328" ref_strand="+" ref_description="SGN-E343328 	[cTOF-17-L4]">
      <seq>tggcagtttcactccaatcgtgaccaatagtttgattgcttctcgtttatggaccccaaattggagaaatgggtttttttcccctttcaatatggtgcacacatttgcctcatctcgtagccgcctgctcaagaacaagaatcactacaaaagattggccctttcatcctgcagtaaaagcttctgctgtcagtccactgctttgtctgatatcaattcaacttctcacactgtttcttcaaatggccaccttagatatggacgcttgatgccatgccctttgcagaacagcccacctagggttgagcatcttgtcgtcacaaaagaaggacctgttgtagaatatatttgtaaagctttggacctccctccattatatgtggaagaccttatacagttcggagctgtgtattacgcacttgtatgtcctaagccacctccgactgccagtcctgagcaaattaaagtgtatgaagaagttacagatccatcagttctgagaaagagaacttcaatcaaagggaaaactgtacgtgaagctcagaaaactttcaaaataactcgtgctgatgaaattgttgaagctggaacgtatttgcgggtgcatgtacaccctaagcgctttccaaggtgctatgacattgactggaaatctcgtattattgctgtaaccgacgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="43944" stop="42074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43644" g_stop="43399" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43398" i_stop="43033" i_length="366">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43032" g_stop="42904" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="375" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42903" i_stop="42760" i_length="144">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.652" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42759" g_stop="42505" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="630" r_length="255" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42504" i_stop="42423" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.877" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42422" g_stop="42374" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="679" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E343328" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43644" e_stop="43399"/>
          <exon e_start="43032" e_stop="42904"/>
          <exon e_start="42759" e_stop="42505"/>
          <exon e_start="42422" e_stop="42374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAGTTTCACTCCAATCGTGACCAATAGTTTGATTGCTTCTCGTTTATGGACCCCAAATTGGAGAAATGGGTTTTTTTCCCCTTTCAATATGGTGCACACATTTGCCTCATCTCGTAGCCGCCTGCTCAAGAACAAGAATCACTACAAAAGATTGGCCCTTTCATCCTGCAGTAAAAGCTTCTGCTGTCAGTCCACTGCTTTGTCTGATATCAATTCAACTTCTCACACTGTTTCTTCAAATGGGTAATTCTTGTTATTTCATTTGTTAGACTTCTGCAAAAGTTGAATGTCGTGTTCTGTATTTTAAGGTCATTTTTTTAAGACATAATTGAGTAAATGAAAATGGTAAATTTCTAATAGCTTAAGCTTTTAGAGAAGGTTCAAAATGGTTTCTTTACTTGTTGGCTATATAGATTAAAAAGTCTAAACAAGAGCAGGAAGCTTACATTGATAGTGTATTGCAACTTAAGTTTAGATTTGTAATGTTACAATTTTCTTCGATCGAGTAGAGACATGTCTCCAATGTCATCAACCTCCACCAGGCTAGTATCCCATTTGATTCTTATGATTTGTTACACTGATCTATTTGTTTTTATTTCACTTTTTCAGCCACCTTAGATATGGACGCTTGATGCCATGCCCTTTGCAGAACAGCCCACCTAGGGTTGAGCATCTTGTCGTCACAAAAGAAGGACCTGTTGTAGAATATATTTGTAAAGCTTTGGACCTCCCTCCATTGTAAATTTCTATCTTTCTTTGTTGTTCTTTTGTTATTTTCCTGCATATCATAATTTACACCTTGAGAGTGATCACCGATGAGTTGAGTGATAGGCATCTTGGATCAGTTAAGTGGTATTTTGACCAATGTTTTTCATCATTAAGATATGTGGAAGACCTTATACAGTTCGGAGCTGTGTATTACGCACTTGTATGTCCTAAGCCACCTCCGACTGCCAGTCCTGAGCAAATTAAAGTGTATGAAGAAGTTACAGATCCATCAGTTCTGAGAAAGAGAACTTCAATCAAAGGGAAAACTGTACGTGAAGCTCAGAAAACTTTCAAAATAACTCGTGCTGATGAAATTGTTGAAGCTGGAACGTATTTGCGGGTGCATGTACACCCTAAGCGCTTTCCAAGGTAATTACTGAACCCTATTCTTACTTTGGCTCATGACTTTTTGTCAGTAGGAAGGTAATGTTGTAAGATTTGATATGATTAGGTGCTATGACATTGACTGGAAATCTCGTATTATTGCTGTAACCGACGAC</genome_strand>
        <mrna_strand>TGGCAGTTTCACTCCAATCGTGACCAATAGTTTGATTGCTTCTCGTTTATGGACCCCAAATTGGAGAAATGGGTTTTTTTCCCCTTTCAATATGGTGCACACATTTGCCTCATCTCGTAGCCGCCTGCTCAAGAACAAGAATCACTACAAAAGATTGGCCCTTTCATCCTGCAGTAAAAGCTTCTGCTGTCAGTCCACTGCTTTGTCTGATATCAATTCAACTTCTCACACTGTTTCTTCAAATGG..............................................................................................................................................................................................................................................................................................................................................................................CCACCTTAGATATGGACGCTTGATGCCATGCCCTTTGCAGAACAGCCCACCTAGGGTTGAGCATCTTGTCGTCACAAAAGAAGGACCTGTTGTAGAATATATTTGTAAAGCTTTGGACCTCCCTCCATT................................................................................................................................................ATATGTGGAAGACCTTATACAGTTCGGAGCTGTGTATTACGCACTTGTATGTCCTAAGCCACCTCCGACTGCCAGTCCTGAGCAAATTAAAGTGTATGAAGAAGTTACAGATCCATCAGTTCTGAGAAAGAGAACTTCAATCAAAGGGAAAACTGTACGTGAAGCTCAGAAAACTTTCAAAATAACTCGTGCTGATGAAATTGTTGAAGCTGGAACGTATTTGCGGGTGCATGTACACCCTAAGCGCTTTCCAAG..................................................................................GTGCTATGACATTGACTGGAAATCTCGTATTATTGCTGTAACCGACGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E280887" ref_strand="+" ref_description="SGN-E280887 	[cLEL-6-M22]">
      <seq>gcacgaggcttttgccagtggcagtttcactccaatcgtgaccaatagtttgattggttctcgtttatggaccccaaattggcgaaatgggtttttttcccctttcaatatggtgcacacatttgcctcatctcgtagccgcctgctcaagaacaagaatcactacaaaagattggccctttcatcctgcagtaaaagcttctgctgtcagtccactgctttgtctgatatcaattcaacttctcacactgtttcttcaaatggccaccttagatatggacgcttgatgccatgccctttgcagaacagcccacctagggttgagcatcttgtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="43961" stop="42662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43663" g_stop="43399" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43398" i_stop="43033" i_length="366">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43032" g_stop="42962" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="335" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E280887" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E280887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43663" e_stop="43399"/>
          <exon e_start="43032" e_stop="42962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACGATGGCTTTTGCCAGTGGCAGTTTCACTCCAATCGTGACCAATAGTTTGATTGCTTCTCGTTTATGGACCCCAAATTGGAGAAATGGGTTTTTTTCCCCTTTCAATATGGTGCACACATTTGCCTCATCTCGTAGCCGCCTGCTCAAGAACAAGAATCACTACAAAAGATTGGCCCTTTCATCCTGCAGTAAAAGCTTCTGCTGTCAGTCCACTGCTTTGTCTGATATCAATTCAACTTCTCACACTGTTTCTTCAAATGGGTAATTCTTGTTATTTCATTTGTTAGACTTCTGCAAAAGTTGAATGTCGTGTTCTGTATTTTAAGGTCATTTTTTTAAGACATAATTGAGTAAATGAAAATGGTAAATTTCTAATAGCTTAAGCTTTTAGAGAAGGTTCAAAATGGTTTCTTTACTTGTTGGCTATATAGATTAAAAAGTCTAAACAAGAGCAGGAAGCTTACATTGATAGTGTATTGCAACTTAAGTTTAGATTTGTAATGTTACAATTTTCTTCGATCGAGTAGAGACATGTCTCCAATGTCATCAACCTCCACCAGGCTAGTATCCCATTTGATTCTTATGATTTGTTACACTGATCTATTTGTTTTTATTTCACTTTTTCAGCCACCTTAGATATGGACGCTTGATGCCATGCCCTTTGCAGAACAGCCCACCTAGGGTTGAGCATCTTGTCG</genome_strand>
        <mrna_strand>GCACGA-GGCTTTTGCCAGTGGCAGTTTCACTCCAATCGTGACCAATAGTTTGATTGGTTCTCGTTTATGGACCCCAAATTGGCGAAATGGGTTTTTTTCCCCTTTCAATATGGTGCACACATTTGCCTCATCTCGTAGCCGCCTGCTCAAGAACAAGAATCACTACAAAAGATTGGCCCTTTCATCCTGCAGTAAAAGCTTCTGCTGTCAGTCCACTGCTTTGTCTGATATCAATTCAACTTCTCACACTGTTTCTTCAAATGG..............................................................................................................................................................................................................................................................................................................................................................................CCACCTTAGATATGGACGCTTGATGCCATGCCCTTTGCAGAACAGCCCACCTAGGGTTGAGCATCTTGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E546064" ref_strand="+" ref_description="SGN-E546064 	[TUS-69-D19]">
      <seq>aaaaagaaaatatggaggtaatggatattctattacttggcttagcaattctttttttatttatatggtggaaatattggtcaatcaccggtggtggaaagaaaaatttgccaccgggtcctcctggttggccattggttggaaatcttttccaagttattctccaacgtcgtccatttatttacgtagtacgtgatttacgtaaaaaatatggacctattttcaccatgcaaatgggacaacgtacccttgttataattactagttccgaactaatccacgaggcattagttcaaaacggtccgcttttcgcgagccgtccaccggattcaccgatccgtttgatattttccgtgggaaagtgcgccatcaactcggccgagtatggcccgttgtggcgcgcactccgacggaattttgttacggagttgattaatccaacgaggattaagcagtgtagttggataaggaaatgggctatggaatatcatatgaaaaggcttgagtatgaggtttctgaagaatgggtttgtgggaagtgatggctaattgtaggcttacaatatgtagcattctaatttgtctttgttttggagctaaaatttctgaagagagaattaagaagattgagagtatacttaaagatgttatgcttattacagctcctcaacttcctgattttttgccactactcacacccttgtttcgcagccnagtgaaacaggcaaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49299" stop="50629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49598" g_stop="50329" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="734" r_length="734" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E546064" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E546064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49598" e_stop="50329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAAAAAATATGGAGGTAATGGATATTCTATTACTTGGCTTAGCAATTCTCTTTTTATTTATATGGTGGAAATATTGGTCAATCACCGGTGGTGGAAAGAAAAATTTGCCACCGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTTCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTACGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTCAAAACGGCCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTCTCCGTGGGAAAGTGCGCCATCAACTCGGCGGAGTATGGCCCGTTGTGGCGCGCACTCCGACGCAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTG-AGAATGGGTTCGT-GGAAGTGATGGCTAATTGTAGGCTTACCATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGAAGAGAGAATTAAGAAGATTGAGAGTATACTTAAAGATGTTATGCTTATTACAGCTCCTCAACTTCCTGACTTTTTGCCAGTGCTTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAAT</genome_strand>
        <mrna_strand>AAAAAGAAAATATGGAGGTAATGGATATTCTATTACTTGGCTTAGCAATTCTTTTTTTATTTATATGGTGGAAATATTGGTCAATCACCGGTGGTGGAAAGAAAAATTTGCCACCGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTCCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTACGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTCAAAACGGTCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTTTCCGTGGGAAAGTGCGCCATCAACTCGGCCGAGTATGGCCCGTTGTGGCGCGCACTCCGACGGAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAAGAATGGGTTTGTGGGAAGTGATGGCTAATTGTAGGCTTACAATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGAAGAGAGAATTAAGAAGATTGAGAGTATACTTAAAGATGTTATGCTTATTACAGCTCCTCAACTTCCTGATTTTTTGCCACTACTCACACCCTTGTTTCGCAGCCNAGTGAAACAGGCAAAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E467211" ref_strand="+" ref_description="SGN-E467211 	[cSTB-42-L13]">
      <seq>ataaaatggaggtaatggatattctattacttggcttagcaattctttttttatttgtatggtggaaatattggtcaatcactggtggtggaaaaaaaaaattgccaccaggtccccctggttggccattggttggaaatcttttccaagttattctccaacgtcgtccttttatttacgtagtgcgtgatttacgtaaaaaatatggacctattttcaccatgcaaatggggcaacgtacccttgttataattactagttccgaactaatccacgaggcattaattcaaaatggcccgcttttcgcgagccgtcctccggattcaccgatccgtttgatattttccgtgggaaagtgcgccatcaactctgccgagtatggtccgttgtggcgcgctctccgacggaattttgttacggagttgattaatccaacgaggattaagcagtgtagttggataaggaaatgggcaatggaatatcacatgaaaaggcttgaaaatgaggtttctgagaatgggtttgtggaagtgatggcgaattgtaggcttacgatatgtagcattcttatttgtctttgttttggagctaaaatttctgaagagaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49305" stop="50511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49604" g_stop="50211" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="608" r_length="608" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E467211" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467211" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49604" e_stop="50211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATATGGAGGTAATGGATATTCTATTACTTGGCTTAGCAATTCTCTTTTTATTTATATGGTGGAAATATTGGTCAATCACCGGTGGTGGAAAGAAAAATTTGCCACCGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTTCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTACGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTCAAAACGGCCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTCTCCGTGGGAAAGTGCGCCATCAACTCGGCGGAGTATGGCCCGTTGTGGCGCGCACTCCGACGCAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTCGTGGAAGTGATGGCTAATTGTAGGCTTACCATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGAAGAGAGA</genome_strand>
        <mrna_strand>ATAAAATGGAGGTAATGGATATTCTATTACTTGGCTTAGCAATTCTTTTTTTATTTGTATGGTGGAAATATTGGTCAATCACTGGTGGTGGAAAAAAAAAATTGCCACCAGGTCCCCCTGGTTGGCCATTGGTTGGAAATCTTTTCCAAGTTATTCTCCAACGTCGTCCTTTTATTTACGTAGTGCGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGGCAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAATTCAAAATGGCCCGCTTTTCGCGAGCCGTCCTCCGGATTCACCGATCCGTTTGATATTTTCCGTGGGAAAGTGCGCCATCAACTCTGCCGAGTATGGTCCGTTGTGGCGCGCTCTCCGACGGAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCAATGGAATATCACATGAAAAGGCTTGAAAATGAGGTTTCTGAGAATGGGTTTGTGGAAGTGATGGCGAATTGTAGGCTTACGATATGTAGCATTCTTATTTGTCTTTGTTTTGGAGCTAAAATTTCTGAAGAGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E474325" ref_strand="+" ref_description="SGN-E474325 	[cSTB-36-K17]">
      <seq>ataaaatggaggtaatggatattctattacttggcttagcaattctttttttatttgtatggtggaaatattggtcaatcaccggtggtggaaaaaaaaatttgccaccaggtccccctggttggccattggttggaaatcttttccaagttattctccaacgtcgtccttttatttacgtagtgcgtgatttacgtaaaaaatatggacctattttcaccatgcaaatggggcaacgtacccttgttataattactagttccgaactaatccacgaggcattagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49305" stop="50191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49604" g_stop="49891" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E474325" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49604" e_stop="49891"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATATGGAGGTAATGGATATTCTATTACTTGGCTTAGCAATTCTCTTTTTATTTATATGGTGGAAATATTGGTCAATCACCGGTGGTGGAAAGAAAAATTTGCCACCGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTTCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTACGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTC</genome_strand>
        <mrna_strand>ATAAAATGGAGGTAATGGATATTCTATTACTTGGCTTAGCAATTCTTTTTTTATTTGTATGGTGGAAATATTGGTCAATCACCGGTGGTGGAAAAAAAAATTTGCCACCAGGTCCCCCTGGTTGGCCATTGGTTGGAAATCTTTTCCAAGTTATTCTCCAACGTCGTCCTTTTATTTACGTAGTGCGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGGCAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E315996" ref_strand="+" ref_description="SGN-E315996 	[cTOA-23-I19]">
      <seq>cgggtcctcctggttggccattggttggaaatctttttcaagttattctccaacgtcgtccatttatttacgtagtacgtgatttacgtaaaaaatatggacctattttcaccatgcaaatgggacaacgtacccttgttataattactagttccgaactaatccacgaggcattagttcaaaacggcccgcttttcgcgagccgtccaccggattcaccgatccgtttgatattctccgtgggaaagtgcgccatcaactcggcggagtatggcccgttgtggcgcgcactccgacgcaattttgttacggagttgattaatccaacgaggattaagcagtgtagttggataaggaaatgggctatggaatatcatatgaaaaggcttgagtatgaggtttctgagaatgggttcgtggaagtgatggctaattgtaggcttaccatatgtagcattctaatttgtctttgttttggagctaaaatttctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49412" stop="50504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49712" g_stop="50204" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E315996" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315996" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49712" e_stop="50204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTTCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTACGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTCAAAACGGCCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTCTCCGTGGGAAAGTGCGCCATCAACTCGGCGGAGTATGGCCCGTTGTGGCGCGCACTCCGACGCAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTCGTGGAAGTGATGGCTAATTGTAGGCTTACCATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGA</genome_strand>
        <mrna_strand>CGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTTCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTACGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTCAAAACGGCCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTCTCCGTGGGAAAGTGCGCCATCAACTCGGCGGAGTATGGCCCGTTGTGGCGCGCACTCCGACGCAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTCGTGGAAGTGATGGCTAATTGTAGGCTTACCATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E620762" ref_strand="+" ref_description="SGN-E620762 	[71467]">
      <seq>tgcttaaacttaccaaaggaattaggtactcaagttgagtctgcctcaatttttttgcctgattcacttggctgcgaaacaacggtgtgagcactggcaaaaagtcaggaagttgaggagctgtaataagcataacatctttaagtataatctcaatcttcttaattctctcttcagaaattttagctccaaaacaaagacaaataagaatgctacatatcgtaagcctacaattcgccatcacttccacaaacccattctcagaaacctcattttcaagccttttcatgtgatattccatagcccatttccttatccaactacactgcttaatcctcgttggattaatcaactccgtaacaaaattccgtcggagagcgcgccacaatggaccatactcggccgagttgatggcgcactttcccacggaaaatatcaaacggatcggtgaatccggaggacggctcgcgaaaagcgggccgttttgaactaatgcctcgtggattagttcagaactagtaattataacaagagtacgttgccccatttgcatggtgaaaataggtccatatttttcacgtaaatcacgtactacgtaaataaaaggacgacgttggagaataacttggaaaagatttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="50674" stop="49437"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50377" g_stop="49737" g_length="641"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="641" r_length="641" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E620762" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E620762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50377" e_stop="49737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTAAACTTACCAAAGGAGTTAGGTACTCAAGTTGAGTCTGCCTCAATTTTTTTGCCTGTTTCACTTGGCTGCGAAACAAGGGTGTAAGCACTGGCAAAAAGTCAGGAAGTTGAGGAGCTGTAATAAGCATAACATCTTTAAGTATACTCTCAATCTTCTTAATTCTCTCTTCAGAAATTTTAGCTCCAAAACAAAGACAAATTAGAATGCTACATATGGTAAGCCTACAATTAGCCATCACTTCCACGAACCCATTCTCAGAAACCTCATACTCAAGCCTTTTCATATGATATTCCATAGCCCATTTCCTTATCCAACTACACTGCTTAATCCTCGTTGGATTAATCAACTCCGTAACAAAATTGCGTCGGAGTGCGCGCCACAACGGGCCATACTCCGCCGAGTTGATGGCGCACTTTCCCACGGAGAATATCAAACGGATCGGTGAATCCGGTGGACGGCTCGCGAAAAGCGGGCCGTTTTGAACTAATGCCTCGTGGATTAGTTCGGAACTAGTAATTATAACAAGGGTACGTTGTCCCATTTGCATGGTGAAAATAGGTCCATATTTTTTACGTAAATCACGTACTACGTAAATAAATGGACGACGTTGGAGAATAACTTGAAAAAGATTTCCA</genome_strand>
        <mrna_strand>TGCTTAAACTTACCAAAGGAATTAGGTACTCAAGTTGAGTCTGCCTCAATTTTTTTGCCTGATTCACTTGGCTGCGAAACAACGGTGTGAGCACTGGCAAAAAGTCAGGAAGTTGAGGAGCTGTAATAAGCATAACATCTTTAAGTATAATCTCAATCTTCTTAATTCTCTCTTCAGAAATTTTAGCTCCAAAACAAAGACAAATAAGAATGCTACATATCGTAAGCCTACAATTCGCCATCACTTCCACAAACCCATTCTCAGAAACCTCATTTTCAAGCCTTTTCATGTGATATTCCATAGCCCATTTCCTTATCCAACTACACTGCTTAATCCTCGTTGGATTAATCAACTCCGTAACAAAATTCCGTCGGAGAGCGCGCCACAATGGACCATACTCGGCCGAGTTGATGGCGCACTTTCCCACGGAAAATATCAAACGGATCGGTGAATCCGGAGGACGGCTCGCGAAAAGCGGGCCGTTTTGAACTAATGCCTCGTGGATTAGTTCAGAACTAGTAATTATAACAAGAGTACGTTGCCCCATTTGCATGGTGAAAATAGGTCCATATTTTTCACGTAAATCACGTACTACGTAAATAAAAGGACGACGTTGGAGAATAACTTGGAAAAGATTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E228266" ref_strand="+" ref_description="SGN-E228266 	[cLED-2-F4]">
      <seq>ttagttcaaaacggcccgcttttcgcgagccgtccaccggattcaccgatccgtttgatattctccgtgggaaagtgcgccatcaactcggcggagtatggcccgttgtggcgcgcactccgacgcaattttgttacggagttgattaatccaacgaggattaagcagtgtagttggataaggaaatgggctatggaatatcatatgaaaaggcttgagtatgaggtttctgagaatgggttcgtggaagtgatggctaattgtaggcttaccatatgtagcattctaatttgtctttgttttggagctaaaatttctgaagagagaattaagaagattgagagtatacttaaagatgttatgcttattacagctcctcaacttcctgactttttgccagtgcttacacccttgtttcgcagccaagtgaaacaggcaaaaaaattgaggcagactcaacttgagtacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49585" stop="50654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49885" g_stop="50354" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E228266" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49885" e_stop="50354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGTTCAAAACGGCCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTCTCCGTGGGAAAGTGCGCCATCAACTCGGCGGAGTATGGCCCGTTGTGGCGCGCACTCCGACGCAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTCGTGGAAGTGATGGCTAATTGTAGGCTTACCATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGAAGAGAGAATTAAGAAGATTGAGAGTATACTTAAAGATGTTATGCTTATTACAGCTCCTCAACTTCCTGACTTTTTGCCAGTGCTTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCT</genome_strand>
        <mrna_strand>TTAGTTCAAAACGGCCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTCTCCGTGGGAAAGTGCGCCATCAACTCGGCGGAGTATGGCCCGTTGTGGCGCGCACTCCGACGCAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTCGTGGAAGTGATGGCTAATTGTAGGCTTACCATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGAAGAGAGAATTAAGAAGATTGAGAGTATACTTAAAGATGTTATGCTTATTACAGCTCCTCAACTTCCTGACTTTTTGCCAGTGCTTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E396956" ref_strand="+" ref_description="SGN-E396956 	[TUS-44-F23]">
      <seq>ttacacccttgtttcgcagccaagtgaaacaggcaaaaaaattgaggcagactcaacttgagtacctaactcctttggtacgagacagaaaggcatttgtggacagcaatggagatcctaatagcagtgaatcagaaatggtaagtccaattggtgcagcctatgttgattcattatttagtctcgagccacctggcaggaaactaggagaagcagagattatcacacttgtttcagaaacaataggtgcaggaactgatacaagtgccacagcacttgaatgggcattgcttcacttagtaatgaaccaagaaatccaagaaaaactctacgaagaaatagttgattgtgttggtaaaaatggttccatttcagaaagtgatgttgaaaaattgccttatcttggagccattgtgaaggagacttttagaaggcatccacctagccattttgttttatcacattctgtaacaaatgacacacaattaggtggctacaatatcccttcggatgcttatgttgaattttacaccgcatggttaacggaggatccgagcctatggaaagacccgaccgagtttcgacccgaaaggtttttgaccggggacggagttgacgtggacttaaccggaatgaaaggtgtcaagatgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49988" stop="51749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50288" g_stop="50364" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50365" i_stop="50873" i_length="509">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50874" g_stop="51449" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="653" r_length="576" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E396956" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50288" e_stop="50364"/>
          <exon e_start="50874" e_stop="51449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTGGTAAGTTTAAATTTCTAAAAATCAGTTTATTTTGGAGAGTGAATTGTATGGTTAATTAATTTGAAAATCACTTTTACCAAATATTAGGCTAGCGTTTTGTGTTTGGCCAACTTCCCAAAACTAGTGGTTTTTAGGGGAGATCAAATTAAAGCTACTTTTTATTTGCTTGTACTACTACTCAAAATATTTACTATTTTTATATAGAAGTTATGTCAAACACCTGACTCTCTTAAAACAAAGCAAATTTCATATAAAAATAGATGTATTTTTTTTGGTTTTTTAATTAAAAGATTGACCAAACAAGCTACACATTATAGAGATAATAGGAGTTTATTTATTGCTTAAATTATAAACTTATCTGATTCTATTTTATGGGTCAAACACGTGGAACTATTTTTGTTTTGTGGAAAACAATGAGATTTGAACCATTGACCTTTAATTTCATTTGTGATTACTAAATTATATGACTGTATTATTTAAAAGTTTAAGTTGTTAAAAAAATCATACAGGTACGAGACAGAAAGGCATTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAATGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGAAAGACCCGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGGGACGGAGTTGACGTGGACTTAACCGGAATGAGAGGTGTCAAGATGCTA</genome_strand>
        <mrna_strand>TTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGACAGAAAGGCATTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAATGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGAAAGACCCGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGGGACGGAGTTGACGTGGACTTAACCGGAATGAAAGGTGTCAAGATGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E277393" ref_strand="+" ref_description="SGN-E277393 	[cLER-3-M4]">
      <seq>tacacccttgtttcgcagccaagtgaaacaggcaaaaaaattgaggcagactcaacttgagtacctaactcctttggtacgagacagaaaggcatttgtggacagcaatggagatcctaatagcagtgaatcagaaatggtaagtccaattggtgcagcctatgttgattcattatttagtctcgagccacctggcaggaaactaggagaagcagagattatcacacttgtttcagaaacaataggtgcaggaactgatacaagtgccacagcacttgaatgggcattgcttcacttagtaatgaaccaagaaatccaagaaaaactctacgaagaaatagttgattgtgttggtaaaaatggttccatttcagaaagtgatgttgaaaaattgccttatcttggagccattgtgaaggagacttttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49989" stop="51526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50289" g_stop="50364" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50365" i_stop="50873" i_length="509">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50874" g_stop="51226" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="429" r_length="353" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E277393" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50289" e_stop="50364"/>
          <exon e_start="50874" e_stop="51226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTGGTAAGTTTAAATTTCTAAAAATCAGTTTATTTTGGAGAGTGAATTGTATGGTTAATTAATTTGAAAATCACTTTTACCAAATATTAGGCTAGCGTTTTGTGTTTGGCCAACTTCCCAAAACTAGTGGTTTTTAGGGGAGATCAAATTAAAGCTACTTTTTATTTGCTTGTACTACTACTCAAAATATTTACTATTTTTATATAGAAGTTATGTCAAACACCTGACTCTCTTAAAACAAAGCAAATTTCATATAAAAATAGATGTATTTTTTTTGGTTTTTTAATTAAAAGATTGACCAAACAAGCTACACATTATAGAGATAATAGGAGTTTATTTATTGCTTAAATTATAAACTTATCTGATTCTATTTTATGGGTCAAACACGTGGAACTATTTTTGTTTTGTGGAAAACAATGAGATTTGAACCATTGACCTTTAATTTCATTTGTGATTACTAAATTATATGACTGTATTATTTAAAAGTTTAAGTTGTTAAAAAAATCATACAGGTACGAGACAGAAAGGCATTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAG</genome_strand>
        <mrna_strand>TACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGACAGAAAGGCATTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E342413" ref_strand="+" ref_description="SGN-E342413 	[cTOF-8-K13]">
      <seq>acccttgtttcgcagccaagtgaaacaggcaaaaaaattgaggcagactcaacttgagtacctaactcctttggtacgagacagaaaggcatttgtggacagcaatggagatcctaatagcagtgaatcagaaatggtaagtccaattggtgcagcctatgttgattcattatttagtctcgagccacctggcaggaaactaggagaagcagagattatcacacttgtttcagaaacaataggtgcaggaactgatacaagtgccacagcacttgaatgggcattgcttcacttagtaatgaaccaagaaatccaagaaaaactctacgaagaaatagttgattgtgttggtaaaaatggttccatttcagaaagtgatgttgaaaaattgccttatcttggagccattgtgaaggagacttttagaaggcatccacctagccattttgttttatcacattctgtaacaaatgacacacaattaggtggctacaatatcccttcggatgcttatgttgaattttacaccgcatggttaacggaggatccgagcctatggaaagacccgaccgagtttcgacccgaaaggtttttgaccggngacggagttgacgtggacttaaccggatgagaggtgtcaagatgctaccattcggggcgggtcgtcggatctgccccgcttggtcattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="49992" stop="51792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50292" g_stop="50364" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50365" i_stop="50873" i_length="509">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50874" g_stop="51492" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="691" r_length="618" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E342413" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342413" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50292" e_stop="50364"/>
          <exon e_start="50874" e_stop="51492"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTGGTAAGTTTAAATTTCTAAAAATCAGTTTATTTTGGAGAGTGAATTGTATGGTTAATTAATTTGAAAATCACTTTTACCAAATATTAGGCTAGCGTTTTGTGTTTGGCCAACTTCCCAAAACTAGTGGTTTTTAGGGGAGATCAAATTAAAGCTACTTTTTATTTGCTTGTACTACTACTCAAAATATTTACTATTTTTATATAGAAGTTATGTCAAACACCTGACTCTCTTAAAACAAAGCAAATTTCATATAAAAATAGATGTATTTTTTTTGGTTTTTTAATTAAAAGATTGACCAAACAAGCTACACATTATAGAGATAATAGGAGTTTATTTATTGCTTAAATTATAAACTTATCTGATTCTATTTTATGGGTCAAACACGTGGAACTATTTTTGTTTTGTGGAAAACAATGAGATTTGAACCATTGACCTTTAATTTCATTTGTGATTACTAAATTATATGACTGTATTATTTAAAAGTTTAAGTTGTTAAAAAAATCATACAGGTACGAGACAGAAAGGCATTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAATGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGAAAGACCCGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGGGACGGAGTTGACGTGGACTTAACCGGAATGAGAGGTGTCAAGATGCTACCATTCGGGGCGGGTCGTCGGATCTGCCCCGCTTGGTCATTGG</genome_strand>
        <mrna_strand>ACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGAGACAGAAAGGCATTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAATGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGAAAGACCCGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGNGACGGAGTTGACGTGGACTTAACCGG-ATGAGAGGTGTCAAGATGCTACCATTCGGGGCGGGTCGTCGGATCTGCCCCGCTTGGTCATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E326392" ref_strand="+" ref_description="SGN-E326392 	[cTOC-14-I21]">
      <seq>gagatcctaatagcagtgaatcagaaatggtaagtccaattggtgcagcctatgttgattcattatttagtctcgagccacctggcaggaaactaggagaagcagagattatcacacttgtttcagaaacaataggtgcaggaactgatacaagtgccacagcacttgaatgggcattgcttcacttagtaatgaaccaagaaatccaagaaaaactctacgaagaaatagttgattgtgttggtaaaaatggttccatttcagaaagtgatgttgaaaaattgccttatcttggagccattgtgaaggagacttttagaaggcatccacctagccattttgttttatcacattctgtaacaaatgacacacaattaggtggctacaatatcccttcggatgcttatgttgaattttacaccgcatggttaacggaggatccgagcctatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="50608" stop="51660"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50908" g_stop="51360" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E326392" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50908" e_stop="51360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAATGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGA</genome_strand>
        <mrna_strand>GAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAATGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E396955" ref_strand="-" ref_description="SGN-E396955 	[TUS-44-F23]">
      <seq>tcacattttgtaacaaatgacaccacatttaggtggttacaatatccttttgggatgcttatgttgaattttacaccgcatggttaacggaggattccgagccttatggaaagacccgaccgagtttcgacccgaaaggtttttgaccggggacggagttgacgtggacttaaccggaatgagaggtgtcaagatgctaccattcggggcgggtcgtcggatctgccccgcttggtcattgggtacgttgcacattaatctgatgcttgccaagatggttcataaattcaagtggatacccatacccggcaacccacccgacccgacagagacctttgcttttaccgtagtgatgaaaaatcccctcaaagcaattattttgccaaggatctaaaattaattaatttcaatatgtgtctacgtacaatgtattatataagctcttaggtggctcctttttaatgttaaacaaattactatggatactgtttcttcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="50955" stop="52050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51255" g_stop="51746" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="497" polyA_stop="506"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E396955" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396955" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="51255" e_stop="51746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACATTCTGTAACAAATGACA-CACAATTAGGTGGCTACAATATCC-CTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGA-TCCGAGCC-TATGGAAAGACCCGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGGGACGGAGTTGACGTGGACTTAACCGGAATGAGAGGTGTCAAGATGCTACCATTCGGGGCGGGTCGTCGGATCTGCCCCGCTTGGTCATTGGGTACGTTGCACATTAATCTGATGCTTGCCAAGATGGTTCATAAATTCAAGTGGATACCCATACCCGGCAACCCACCCGACCCGACAGAGACCTTTGCTTTTACCGTAGTGATGAAAAATCCCCTCAAAGCAATTATTTTGCCAAGGATCTAAAATTAATTAATTTCAATATGTGTCTACGTACAATGTATTATATAAGCTCTTAGGTGGCTCCTTTTTAATGTTAAACAAATTACTATGGATACTGTTTCTTCA</genome_strand>
        <mrna_strand>TCACATTTTGTAACAAATGACACCACATTTAGGTGGTTACAATATCCTTTTGGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATTCCGAGCCTTATGGAAAGACCCGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGGGACGGAGTTGACGTGGACTTAACCGGAATGAGAGGTGTCAAGATGCTACCATTCGGGGCGGGTCGTCGGATCTGCCCCGCTTGGTCATTGGGTACGTTGCACATTAATCTGATGCTTGCCAAGATGGTTCATAAATTCAAGTGGATACCCATACCCGGCAACCCACCCGACCCGACAGAGACCTTTGCTTTTACCGTAGTGATGAAAAATCCCCTCAAAGCAATTATTTTGCCAAGGATCTAAAATTAATTAATTTCAATATGTGTCTACGTACAATGTATTATATAAGCTCTTAGGTGGCTCCTTTTTAATGTTAAACAAATTACTATGGATACTGTTTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E349726" ref_strand="+" ref_description="SGN-E349726 	[cTOS-3-C5]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacacatagattaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcaggtgtcacgaaccgacacgtagatttaggggatcggagtgtcacgttccgacacgtagatttaggggatcagagtatcacgtaccgacacaagaagattaatgaatatganggagcggaatgtcacgtaccgacacaagagaaataaagacaatgaatcttgaaagatgttatatactcaatctaatgaacataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="52542" stop="53858"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52842" g_stop="53558" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="717" r_length="717" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E349726" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E349726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52842" e_stop="53558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCTTCGGTGGAGGTAGGTTATGGTTT-TC--ATGCT-TTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGACTTGATGAATTGATGGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGGACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGG-GTGTCACGGACCGACACGTAGAATTAGGGGATCGGAGTGTCACGTACCGACACAAGATGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTCAAAAGATGTTAATATACTCAATCTAATGAACATAA</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATA-TAAGCATGATGAAGTTATTGAATCCCAAATCTTG-TAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAG-ATTAAGGGATCAGGTGTCACGAACCAACACATAG-ATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACGTAGATTTAGGGGATCAGAGTATCACGTACCGACACAAGAAGATTAATGAATATGANGGAGCGGAATGTCACGTACCGACACAAGAGAAATAAAGACAATGAATCTTGAAAGATGTT-ATATACTCAATCTAATGAACATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E357559" ref_strand="+" ref_description="SGN-E357559 	[cTOS-23-F2]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="52542" stop="53541"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52842" g_stop="53242" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E357559" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52842" e_stop="53242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCTTCGGTGGAGGTAGGTTATGGTTT-TC--ATGCT-TTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGACTTGATGAATTGATGGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACG</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATA-TAAGCATGATGAAGTTATTGAATCCCAAATCTTG-TAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAG-ATTAAGGGATCAGGTGTCACGAACCAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E391780" ref_strand="+" ref_description="SGN-E391780 	[TUS-24-O2]">
      <seq>tcacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="53103" stop="53940"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53403" g_stop="53640" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E391780" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53403" e_stop="53640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGGACCGACACGTAGAATTAGGGGATCGGAGTGTCACGTACCGACACAAGATGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTCAAAAGATGTTAATATACTCAATCTAATGAACATAATTCCCAAATGAGTATGATATTGAGGCTTGAGTCCTCATGCGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTT</genome_strand>
        <mrna_strand>TCACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 	[cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="53104" stop="54181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53404" g_stop="53881" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53404" e_stop="53881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGGACCGACACGTAGAATTAGGGGATCGGAGTGTCACGTACCGACACAAGATGATTAATGAATA-TGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTCAAAAGATGTTAATATACTCAATCTAATGAACATAATTCCCAAATGAGTATGATATTGAGGCTTGAGTCCTCATGCGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATGGCTGATTTTATGATATTACTTGG--TATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTAACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGTCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E357033" ref_strand="+" ref_description="SGN-E357033 	[cTOS-22-C24]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="54029" stop="53109"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53729" g_stop="53417" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="313" r_length="313" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E357033" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>313</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53729" e_stop="53417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATATCATAAAATCAGCCATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACGCATGAGGACTCAAGCCTCAATATCATACTCATTTGGGAATTATGTTCATTAGATTGAGTATATTAACATCTTTTGAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCATCTTGTGTCGGTACGTGACACTCCGATCCCCTAATTCTAC</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATATCAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTCATATTCATTAATCCTCTTGTGTGAACACATGACACTCCGATCCCCTAAATCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E331750" ref_strand="+" ref_description="SGN-E331750 	[cTOD-7-P6]">
      <seq>tcaaatactcagaaagcaactccaggatcaacttttccgacaccttttgcttctccatgggtcactgggagtttcccttcaagccctctcttatacagtcctgatattggggctcatagggttggtagaattgatttagttccaccactaagcttggatggattacaatctgcaaaaacaaccgtctcaccgcccgattctcctcgaaaacatcgacagctttcgttgcctgtacaatctttgtatgagaagctaaagaattcccctcaggttggagttgtgcacttggcactgcaaaatgatacatctggctctgtactgagttggcagaatgatgtatttgtggttgccgaacctggagaactagcagataagtttctgcagagtgtcaaattcagcttgttgtctatgatgcgaggccgccggagaaagtatgcatcagtcatctctgacatctcaaccgttgctgatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="69167" stop="70317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69467" g_stop="69789" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69790" i_stop="69866" i_length="77">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69867" g_stop="70017" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="474" r_length="151" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E331750" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69467" e_stop="69789"/>
          <exon e_start="69867" e_stop="70017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATACTCAGAAAGCAACTCCAGGATCAACTTTTCCGACACCTTTTGCTTCTCCATTGTTCACTGGGAGTTTCCCTTCAAGCCCTCTCTTATACAGTCCTGATATTGGGGCTCATAGGGTTGGTAGAATTGATTTAGTTCCACCACTAAGCTTGGATGGATTACAATCTGCAAAAACAACCGTCTCACCGCCCGATTCTCCTCGAAAACATCGACAGCTTTCGTTGCCTGTACAATCTTTGTATGAGAAGCTAAAGAATTCCCCTCAGGTTGGAGTTGTGCACTTGGCACTGCAAAATGATACATCTGGCTCTGTACTGAGGTTAGATATTCATTATTGTTTGGTTACTTACTGGAAATGCTTTTTTTATGCTAATGTCATCAACTTCTACGAGATAGTTGGCAGAATGATGTATTTGTGGTTGCCGAACCTGGAGAACTAGCAGATAAGTTTCTGCAGAGTGTCAAATTCAGCTTGTTGTCTATGATGCGAGGCCGCCGGAGAAAGTATGCATCAGTCATCTCTGACATCTCAACCGTTGCTGATCTT</genome_strand>
        <mrna_strand>TCAAATACTCAGAAAGCAACTCCAGGATCAACTTTTCCGACACCTTTTGCTTCTCCATGGGTCACTGGGAGTTTCCCTTCAAGCCCTCTCTTATACAGTCCTGATATTGGGGCTCATAGGGTTGGTAGAATTGATTTAGTTCCACCACTAAGCTTGGATGGATTACAATCTGCAAAAACAACCGTCTCACCGCCCGATTCTCCTCGAAAACATCGACAGCTTTCGTTGCCTGTACAATCTTTGTATGAGAAGCTAAAGAATTCCCCTCAGGTTGGAGTTGTGCACTTGGCACTGCAAAATGATACATCTGGCTCTGTACTGAG.............................................................................TTGGCAGAATGATGTATTTGTGGTTGCCGAACCTGGAGAACTAGCAGATAAGTTTCTGCAGAGTGTCAAATTCAGCTTGTTGTCTATGATGCGAGGCCGCCGGAGAAAGTATGCATCAGTCATCTCTGACATCTCAACCGTTGCTGATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E277863" ref_strand="+" ref_description="SGN-E277863 	[cLEL-5-O6]">
      <seq>ccaaagaattcggcacgaggtcaaattcagcttgtagtcnatgatgcgaggccgccggagaaaggatgcatcagtcatctctgacatctccaccgttgctgatcttgttaggtgtaggccatgcttccaaattgggggtgtagtccaccgttatattgggcgtcagacacaggtcatggaagatgaccaagaaattggtgcctatatgttccgtaggacggttccttcaatgcatttaacttcagaagatattcggtggatggttggagcatggagggagagaattataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="69620" stop="71376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69910" g_stop="70083" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70084" i_stop="70207" i_length="124">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70208" g_stop="70297" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="262" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70298" i_stop="71048" i_length="751">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71049" g_stop="71076" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="290" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E277863" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>292</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277863" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69910" e_stop="70083"/>
          <exon e_start="70208" e_stop="70297"/>
          <exon e_start="71049" e_stop="71076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGATAAGTTTCTGCAGAGTGTCAAATTCAGCTTGTTGTCTATGATGCGAGGCCGCCGGAGAAAGTATGCATCAGTCATCTCTGACATCTCAACCGTTGCTGATCTTGTTAGGTGTAGGCCATGCTTCCAAATTGGGGGTGTAGTCCACCGTTATATTGGGCGTCAGACACAGGTATGTGTGGGCATGATATCTGCCATCCTTATTTTGATTATTCTTTGCTTTCAGAAACCAAGATTTATGAATTTGCTTTTGATCAAAGGAGTTCATGAATTTTCCTATTTTTTGTCATCTGAAGGTCATGGAAGATGACCAAGAAATTGGTGCCTATATGTTCCGTAGGACGGTTCCTTCAATGCATTTAACTTCAGAAGATATTCGGTGGATGGTATGCTCTCCGAGTATTTATGTGATTCAGAACTGCATCTTTTTTTCATTGCAAGATTATGTGTGAGAAGGAACTTATCTCTTCCAAATGATGTTATATGGTTGGCATAATTTGATTGAACAAGTCAACACCAATCTGGTTTGGTTCAAAATATGACAAATGAACCTACTTACTTGGGTTCAATTATCTGTGACAAGGATAAACTCTTCAGCACTCAGAGATCTCAGGGGATTTTTGCTGCGGCCCTGATAATGGGAGCAGTGAGGTCTTCAGCAGATAAAGCTCTGTAGTGCTGATGCTCCCTAATGGATGTGCATGGAAAGCGCTTTCCACATATTGCTTTTATCCTAAAAAATTAATTGAACAAATTTATCTCTGGTTTGCTCTGCATCACTTCAAGATCTGAACTTGAATATGTAATGACTGGTCTATTTCTGTCTCAGGTTTGAAGAATCAGAGGCTTTTTGATTACACTTCCCCCTTTTTAATGTATACTTAAGTTTTACTACTGAGACTTGGTTAATCACTTGCTATACTAAAGGTTTATTATTAAGACTTGGTTAATCACTTGCTCTGTCATTCATCTTTCAAGTAAATTGTGTTGCATTTCTTTCATTTGTCATGATAGAAGGCTTAATACACTGTCAGTGAGTATGTTGATTCATTTCGTGTTATCTCTCCAAGACCTGTGCTTGTGACCTATTACTCTAGAAAATTTGTTAATCCTTTGAGTATTTGTTAAACCTTCCAGGTTGGAGCATGGAGGGAGAGAATTATAA</genome_strand>
        <mrna_strand>CCAAAGAA--TTCGGCACGAGGTCAAATTCAGCTTGTAGTCNATGATGCGAGGCCGCCGGAGAAAGGATGCATCAGTCATCTCTGACATCTCCACCGTTGCTGATCTTGTTAGGTGTAGGCCATGCTTCCAAATTGGGGGTGTAGTCCACCGTTATATTGGGCGTCAGACACAG............................................................................................................................GTCATGGAAGATGACCAAGAAATTGGTGCCTATATGTTCCGTAGGACGGTTCCTTCAATGCATTTAACTTCAGAAGATATTCGGTGGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCATGGAGGGAGAGAATTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E245233" ref_strand="+" ref_description="SGN-E245233 	[cLEF-44-D23]">
      <seq>aagatgaccaagaaattggtgcctatatgttccgtaggacggttccttcaatgcatttaacttcagaagatattcggtggatggttggagcatggagggagagaattataatcttcactggtttctatggccctatccaacctgtaatcaaggcttttctagattcaggagcaaaagctgttatatgtccttcctctgagcctgatgaagtgcagttgtctacatttcacgggtcaggtgattttaattctttcgataatggaaagtttgaaattggcgaagaagaagcagaggatgacgatactgaacctactagtccagcaagtgattgggatgatagtgagccagatgaaagtgaaggacgctctcaattcttttgggatgatgatgagggggagttgtcccaattcatatgtcaattctatgagtctctctttcagggtggttcaagaataggtgctgcattgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="69915" stop="71734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70215" g_stop="70297" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70298" i_stop="71048" i_length="751">
            <donor d_prob="0.759" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71049" g_stop="71434" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="469" r_length="386" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E245233" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70215" e_stop="70297"/>
          <exon e_start="71049" e_stop="71434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATGACCAAGAAATTGGTGCCTATATGTTCCGTAGGACGGTTCCTTCAATGCATTTAACTTCAGAAGATATTCGGTGGATGGTATGCTCTCCGAGTATTTATGTGATTCAGAACTGCATCTTTTTTTCATTGCAAGATTATGTGTGAGAAGGAACTTATCTCTTCCAAATGATGTTATATGGTTGGCATAATTTGATTGAACAAGTCAACACCAATCTGGTTTGGTTCAAAATATGACAAATGAACCTACTTACTTGGGTTCAATTATCTGTGACAAGGATAAACTCTTCAGCACTCAGAGATCTCAGGGGATTTTTGCTGCGGCCCTGATAATGGGAGCAGTGAGGTCTTCAGCAGATAAAGCTCTGTAGTGCTGATGCTCCCTAATGGATGTGCATGGAAAGCGCTTTCCACATATTGCTTTTATCCTAAAAAATTAATTGAACAAATTTATCTCTGGTTTGCTCTGCATCACTTCAAGATCTGAACTTGAATATGTAATGACTGGTCTATTTCTGTCTCAGGTTTGAAGAATCAGAGGCTTTTTGATTACACTTCCCCCTTTTTAATGTATACTTAAGTTTTACTACTGAGACTTGGTTAATCACTTGCTATACTAAAGGTTTATTATTAAGACTTGGTTAATCACTTGCTCTGTCATTCATCTTTCAAGTAAATTGTGTTGCATTTCTTTCATTTGTCATGATAGAAGGCTTAATACACTGTCAGTGAGTATGTTGATTCATTTCGTGTTATCTCTCCAAGACCTGTGCTTGTGACCTATTACTCTAGAAAATTTGTTAATCCTTTGAGTATTTGTTAAACCTTCCAGGTTGGAGCATGGAGGGAGAGAATTATAATCTTCACTGGTTTCTATGGCCCTATCCAACCTGTAATCAAGGCTTTTCTAGATTCAGGAGCAAAAGCTGTTATATGTCCTTCCTCTGAGCCTGATGAAGTGCAGTTGTCTACATTTCACGGGTCAGGTGATTTTAATTCTTTCGATAATGGAAAGTTTGAAATTGGCGAAGAAGAAGCAGAGGATGACGATACTGAACCTACTAGTCCAGCAAGTGATTGGGATGATAGTGAGCCAGATGAAAGTGAAGGACGCTCTCAATTCTTTTGGGATGATGATGAGGGGGAGTTGTCCCAATTCATATGTCAATTCTATGAGTCTCTCTTTCAGGGTGGTTCAAGAATAGGTGCTGCATTGCA</genome_strand>
        <mrna_strand>AAGATGACCAAGAAATTGGTGCCTATATGTTCCGTAGGACGGTTCCTTCAATGCATTTAACTTCAGAAGATATTCGGTGGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCATGGAGGGAGAGAATTATAATCTTCACTGGTTTCTATGGCCCTATCCAACCTGTAATCAAGGCTTTTCTAGATTCAGGAGCAAAAGCTGTTATATGTCCTTCCTCTGAGCCTGATGAAGTGCAGTTGTCTACATTTCACGGGTCAGGTGATTTTAATTCTTTCGATAATGGAAAGTTTGAAATTGGCGAAGAAGAAGCAGAGGATGACGATACTGAACCTACTAGTCCAGCAAGTGATTGGGATGATAGTGAGCCAGATGAAAGTGAAGGACGCTCTCAATTCTTTTGGGATGATGATGAGGGGGAGTTGTCCCAATTCATATGTCAATTCTATGAGTCTCTCTTTCAGGGTGGTTCAAGAATAGGTGCTGCATTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E200632" ref_strand="+" ref_description="SGN-E200632 	[cLEC-9-E20]">
      <seq>cagatgaaagtgaaggacgctctcaattcttttgggatgatgatgagggggagttgtcccaattcatatgtcaattctatgagtctctctttcagggtggttcaagaataggtgctgcattgcagcaggctcgtgcctcgcaccgtagcctaaggtattcatgccatcttcccagcataccatagttcgtcggggtactcataccatgatagtctcaaggaaggcgcaagtcagtcaatgcttatgctgactgcatgttgcttgattaaggcaatttgtgctctctctacattattccatactttgtaaagaagaactatacttgtacaagcaaaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="71011" stop="71949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71311" g_stop="71649" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="339" r_length="339" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E200632" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200632" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71311" e_stop="71649"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATGAAAGTGAAGGACGCTCTCAATTCTTTTGGGATGATGATGAGGGGGAGTTGTCCCAATTCATATGTCAATTCTATGAGTCTCTCTTTCAGGGTGGTTCAAGAATAGGTGCTGCATTGCAGCAGGCTCGTGCCTCGCACCGTAGCCTAAGGTATTCATGCCATCTTCCCAGCATACCATAGTTCGTCGGGGTACTCATACCATGATAGTCTCAAGGAAGGCGCAAGTCAGTCAATGCTTATGCTGACTGCATGTTGCTTGATTAAGGCAATTTGTGCTCTCTCTACATTATTCCATACTTTGTAAAGAAGAACTATACTTGTACAAGCAAAGGAA</genome_strand>
        <mrna_strand>CAGATGAAAGTGAAGGACGCTCTCAATTCTTTTGGGATGATGATGAGGGGGAGTTGTCCCAATTCATATGTCAATTCTATGAGTCTCTCTTTCAGGGTGGTTCAAGAATAGGTGCTGCATTGCAGCAGGCTCGTGCCTCGCACCGTAGCCTAAGGTATTCATGCCATCTTCCCAGCATACCATAGTTCGTCGGGGTACTCATACCATGATAGTCTCAAGGAAGGCGCAAGTCAGTCAATGCTTATGCTGACTGCATGTTGCTTGATTAAGGCAATTTGTGCTCTCTCTACATTATTCCATACTTTGTAAAGAAGAACTATACTTGTACAAGCAAAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E541376" ref_strand="+" ref_description="SGN-E541376 	[TUS-62-C4]">
      <seq>gaaaatataagatgaataagaaaggaggcagcactaactcctccagtatttgttaaaccttccagattgtagcatggagggggagaattataatcttcactggccctacccaatttgtagtcaaggtttttctagattcaggagctaaagctgttgcatgtccttccattgagcccgatgaagcgcggttgtttacatttcaagagtcgggtgattttaactctttcaataatggaaagtttgtaattggcgaaaaagaaatagaagatgacgacactgaaccttctagagtccagccagtgcttgggaagatagtttaccagagaaaagtgaaggacactctcagttcttttgggatgaatatgatgatcaaggggagttatcccagttcatatgtcagttttatgagtctcgttatcaaattggttcgagaatagatgatgcattacaacatgctcgaagatattcatgccatcttcccagcataccgtagttaggtggttatctctgaccatgatagtccccagggaaagcgcgagtttgttaatgcttatgctgactgcatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="73646" stop="74812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73946" g_stop="74512" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E541376" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541376" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73946" e_stop="74512"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATATAAGATGAATAAGAAAGGAGGCAGCACTAACTCCTCCAGTATTTGTTAAACCTTCCAGATTGTAGCATGGAGGGGGAGAATTATAATCTTCACTGGCCCTACCCAATTTGTAGTCAAGGTTTTTCTAGATTCAGGAGCTAAAGCTGTTGCATGTCCTTCCATTGAGCCCGATGAAGCGCGGTTGTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTTCTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGTTATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCATCTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCAAGGG-AAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGAT</genome_strand>
        <mrna_strand>GAAAATATAAGATGAATAAGAAAGGAGGCAGCACTAACTCCTCCAGTATTTGTTAAACCTTCCAGATTGTAGCATGGAGGGGGAGAATTATAATCTTCACTGGCCCTACCCAATTTGTAGTCAAGGTTTTTCTAGATTCAGGAGCTAAAGCTGTTGCATGTCCTTCCATTGAGCCCGATGAAGCGCGGTTGTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTTCTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGTTATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCATCTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCCAGGGAAAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E297526" ref_strand="+" ref_description="SGN-E297526 	[cLET-28-B18]">
      <seq>aaaatataagatgaataagataggaggcagcactaactcctccagtatttgttaaaccttccagattgtagcatggagggggagaattataatcttcactggccctacccaatttgtagtcaaggtttttctagattcaggagctaaagctgttgcatgtccttccattgagcccgatgaagcgcggttgtttacatttcaagagtcgggtgattttaactctttcaataatggaaagtttgtaattggcgaaaaagaaatagaagatgacgacactgaaccttctagagtccagccagtgcttgggaagatagtttaccagagaaaagtgaaggacactctcagttcttttgggatgaatatgatgatcaaggggagttatcccagttcatatgtcagttttatgagtctcgttatcaaattggttcgagaatagatgatgcattacaacatgctcgaagatattcatgccatcttcccagcataccgtagttaggtggttatctctgaccatgatagtcccaagggaagcgcgagtttgttaatgcttatgctgactgcatgatgttgcttatcaaagcatttgcatggtcttgtgttgtaaagaagaactgcacttgtatatgcaatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="73647" stop="74879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73947" g_stop="74579" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E297526" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73947" e_stop="74579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATATAAGATGAATAAGAAAGGAGGCAGCACTAACTCCTCCAGTATTTGTTAAACCTTCCAGATTGTAGCATGGAGGGGGAGAATTATAATCTTCACTGGCCCTACCCAATTTGTAGTCAAGGTTTTTCTAGATTCAGGAGCTAAAGCTGTTGCATGTCCTTCCATTGAGCCCGATGAAGCGCGGTTGTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTTCTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGTTATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCATCTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCAAGGGAAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGATGTTGCTTATCAAAGCATTTGCATGGTCTTGTGTTGTAAAGAAGAACTGCACTTGTATATGCAATGGA</genome_strand>
        <mrna_strand>AAAATATAAGATGAATAAGATAGGAGGCAGCACTAACTCCTCCAGTATTTGTTAAACCTTCCAGATTGTAGCATGGAGGGGGAGAATTATAATCTTCACTGGCCCTACCCAATTTGTAGTCAAGGTTTTTCTAGATTCAGGAGCTAAAGCTGTTGCATGTCCTTCCATTGAGCCCGATGAAGCGCGGTTGTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTTCTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGTTATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCATCTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCAAGGGAAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGATGTTGCTTATCAAAGCATTTGCATGGTCTTGTGTTGTAAAGAAGAACTGCACTTGTATATGCAATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E541373" ref_strand="-" ref_description="SGN-E541373 	[TUS-62-C4]">
      <seq>atgaagcgcggttgtttacatttcaagagtcgggtgattttaactctttcaataatggaaagtttgtaattggcgaaaaagaaatagaagatgacgacactgaaccttctagagtccagccagtgcttgggaagatagtttaccagagaaaagtgaaggacactctcagttcttttgggatgaatatgatgatcaaggggagttatcccagttcatatgtcagttttatgagtctcgttatcaaattggttcgagaatagatgatgcattacaacatgctcgaagatattcatgccatcttcccagcataccgtagttaggtggttatctctgaccatgatagtcccaagggaagcgcgagtttgttaatgcttatgctgactgcatgatgttgcttatcaaagcatttgcatggtcttgtgttgtaaagaagaactgcacttgtatatgcaatggaaaaggattgcagaaggaagaaaacatggagagagaaatagtagaaatgagtacatttctttgttgttctacttgtacactgctggatgttgacacaatttcaaacatgctatcacaatctggtgtgctcaagtgctctccgtgcaacttgcaatgtgtgaacaggaatccatgagatgttagtgtctgttacacaaaaaactactagttgggttgacgttgaactcatcgatatatatatgaaaatagagtcacaactcacaaatgtgaggctgaccgatctatgaagtgggtgaaagtcttggtgatctcttcttatttgtccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="73823" stop="75305"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74123" g_stop="74628" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74629" i_stop="74723" i_length="95">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.582" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74724" g_stop="75008" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="791" r_length="285" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E541373" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E541373" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="74123" e_stop="74628"/>
          <exon e_start="74724" e_stop="75008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAGCGCGGTTGTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTTCTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGTTATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCATCTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCAAGGGAAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGATGTTGCTTATCAAAGCATTTGCATGGTCTTGTGTTGTAAAGAAGAACTGCACTTGTATATGCAATGGAAAAGGATTGCAGAAGGAAGAAAACATGGAGAGAGAAATAGTAGAAATGAGTAATAATTTTGAGGCTTTTAACTGATTGTTTGTGTTCTGTCTTTGATGAATGTTTGATCATTTTTCTTAAAGGTTACTCTTTTGTGAAAAGCAGGTACATTTCTTTGTTGTTCTACTTGTACACTGCTGGATGTTGACACAATTTCAAACATGCTATCACAATCTGGTGTGCTCAAGTGCTCTCCGTGCAACTTGCAATGTGTGAACAGGAATCCATGAGATGTTAGTGTCTGTTACACAAAAAACTACTAGTTGGGTTGACGTTGAACTCATCGATATATATATGAAAATAGAGTCACAACTCACAAATGTGAGGCTGACCGATCTATGAAGTGGGTGAAAGTCTTGGTGATCTCTTCTTATTTGTCCAACGAGAGTA</genome_strand>
        <mrna_strand>ATGAAGCGCGGTTGTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTTCTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGTTATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCATCTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCAAGGGAAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGATGTTGCTTATCAAAGCATTTGCATGGTCTTGTGTTGTAAAGAAGAACTGCACTTGTATATGCAATGGAAAAGGATTGCAGAAGGAAGAAAACATGGAGAGAGAAATAGTAGAAATGA...............................................................................................GTACATTTCTTTGTTGTTCTACTTGTACACTGCTGGATGTTGACACAATTTCAAACATGCTATCACAATCTGGTGTGCTCAAGTGCTCTCCGTGCAACTTGCAATGTGTGAACAGGAATCCATGAGATGTTAGTGTCTGTTACACAAAAAACTACTAGTTGGGTTGACGTTGAACTCATCGATATATATATGAAAATAGAGTCACAACTCACAAATGTGAGGCTGACCGATCTATGAAGTGGGTGAAAGTCTTGGTGATCTCTTCTTATTTGTCCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E612686" ref_strand="+" ref_description="SGN-E612686 	[62451]">
      <seq>ggctaagatcaagtgtagtatctgttcttattagtttaatatctgatatgtgggccattggtccacacgatattaactcaattttttaagggggagagtccattaaggtagcttgctacctgggctctcgagcgtcgcccatgcgttgcactactgcacgggcctggcgcaccccaccaaaaaaaacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="77409" stop="78188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77709" g_stop="77892" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="185" polyA_stop="197"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E612686" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>184</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E612686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77709" e_stop="77892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGACCATTGGTTCACACGATATTAACTCAATTTTTTAAGGGGGAGAGTTCATCAAGGTAGCTTGCTACCTGGACTCTCAAGCGTCGCCCATGCGTTGCACTATAGCAAGGGCCTGGCGCACCCCACCAATCCA</genome_strand>
        <mrna_strand>GGCTAAGATCAAGTGTAGTATCTGTTCTTATTAGTTTAATATCTGATATGTGGGCCATTGGTCCACACGATATTAACTCAATTTTTTAAGGGGGAGAGTCCATTAAGGTAGCTTGCTACCTGGGCTCTCGAGCGTCGCCCATGCGTTGCACTACTGCACGGGCCTGGCGCACCCCACCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E336240" ref_strand="+" ref_description="SGN-E336240 	[cTOE-10-P3]">
      <seq>ttactttgttctttcttttatagcatcagttttttgacttctttcaatacaacaagataagcggaggggagagctgaaatggctaggttgccacttgggtcgtcgccgattgacatcgccggtccggtgaccaactggtgggaccacgtcaacgaatccgatcagtggcaaaatgggattatctactccctttgtgcttcctatggtcttgtttcagcagttgccctaattcaattaatacgaattgatttgagggtacccgagtatggctggacaacacagaacgtgttccatctgatgaactgtgttgtaaatggagttcgtgcaattgtctttggatttcacaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="78748" stop="80462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79048" g_stop="79275" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79276" i_stop="79955" i_length="680">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79956" g_stop="80046" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="319" r_length="91" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80047" i_stop="80132" i_length="86">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.847" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80133" g_stop="80162" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="349" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E336240" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79048" e_stop="79275"/>
          <exon e_start="79956" e_stop="80046"/>
          <exon e_start="80133" e_stop="80162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTTTGTTCTTTCTTTTATAGCATCAGTTTTTTGACTTCTTTCAATACAACAAGATAAGCGGAGGGGAGAGCTGAAATGGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTAGTAAGTTTCTCTTTCTCTTCCATTCTCTTTTTCTGCTCTGTAGATATGTAAAGATTGGTTTTTTCTTTCCTTTTTGTGAATTTCACGATCAAAGTAGAGTTTGGGAGCTGAAATGCCGGAATTGATGTTAGATGATTTATATTTTCAACTCCTACTAATTTGATGTTGAGATGCAGTTGATAGAATTGCAGTGTCTAGTTCATGTATAAAGTCAAGTACTTGCTGTTAGTTGTTTTTTTTTTCGTAACTTCTGTTAGAAATGGAAAATCTTGGTTGGTCAACTGTAGGAATGAAATAATGGAGTAGGGAATCAGACGAGAATGTTTGATTACCAAGTGCAATTTAGGGGTTTCCATTAAGACAAATTACGGTATATTTTGTGCTTTTTTATGTCGCTAATAAAAGTTTGGAGCAGTGGACTGACTGGTTAATCATACTTCTGGTAGGTTCGGTTAGATGGTTAGTATTTGGGAGTACTCCTTTTGTGTGTGCTTGTGAAGCTTATGACCTTTTCCAATAAGTAGATAAGTTTCATTGAAGGGTGTTTTTTCATACTTTGATTAATATGTGTTTCAGATACAGTATTTACCTAATACTGCATGTGTAGAGAACTGTTTTCCTCGTGGTGCTTGCTTAGTTGGCAGGACTTTTGGTTGAGTCTATGAGTTAACTATGTGCAGATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAGGTAAAGCGGACTCAGACTAAACAAACCGTCCAGCTCTTTTTCTTAATCTGGAATTTTGTTTTAAATGCAAATCTTTTGTTTTTCAGTTCGTGCAATTGTCTTTGGATTTCACAAAC</genome_strand>
        <mrna_strand>TTACTTTGTTCTTTCTTTTATAGCATCAGTTTTTTGACTTCTTTCAATACAACAAGATAAGCGGAGGGGAGAGCTGAAATGGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGATCAGTGGCAAAATGGGATTATCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAGAACGTGTTCCATCTGATGAACTGTGTTGTAAATGGAG......................................................................................TTCGTGCAATTGTCTTTGGATTTCACAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E573305" ref_strand="+" ref_description="SGN-E573305 	[32594]">
      <seq>gctgaaatgactaggttgccacttgggtcgtcgccgattgacttcgccggtccggcgactaactggtgggacgacgtcaacgaatccgttcagtggcaagatgggattttctactccctttgtgcttcttatgctcttgtttcagccgttgccctaattcaattaataaggatcgatttgagggtacccgagtatggttggacaacacaaaattgtgttccatctgatgaactttgttgtaaatggagttcgtgcaattgtctttggatttcacaaacaggtttttctgttccattataaggtgctgactctggcaatattggacctaccagggctccttttcttttcaacattcacactccttgttctattttgggctgagatatatcaccaggctaggagtttaccaacagataagctcaggatttcttatattgcaataaatggtgcaatatacttcattcaggcctgtatctgggtttacctctgggtcaatgacaatagcacagtggaattcattgggaacgatatttatggcagttgtatcagttattgcagccttgggctttctgctatatggtggaaggttatttctcatgctgcggcgctttcctattgaatctaaagggaggagaaagaagcttcatgaggttggatctgtgactgccatatgtttcacctgtttcctcattagatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="78820" stop="85269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79120" g_stop="79275" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79276" i_stop="79955" i_length="680">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.894" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79956" g_stop="80046" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="248" r_length="92" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80047" i_stop="80132" i_length="86">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.847" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80133" g_stop="80185" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="301" r_length="53" r_score="0.962"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80186" i_stop="81052" i_length="867">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81053" g_stop="81145" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="394" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81146" i_stop="81220" i_length="75">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81221" g_stop="81292" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="466" r_length="72" r_score="0.944"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81293" i_stop="82163" i_length="871">
            <donor d_prob="0.942" d_score="0.92"/>
            <acceptor a_prob="0.919" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="82164" g_stop="82236" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="540" r_length="74" r_score="0.959"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="82237" i_stop="82344" i_length="108">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="82345" g_stop="82390" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="586" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="82391" i_stop="82516" i_length="126">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="82517" g_stop="82580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="650" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="82581" i_stop="84920" i_length="2340">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="84921" g_stop="84969" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="699" r_length="49" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E573305" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79120" e_stop="79275"/>
          <exon e_start="79956" e_stop="80046"/>
          <exon e_start="80133" e_stop="80185"/>
          <exon e_start="81053" e_stop="81145"/>
          <exon e_start="81221" e_stop="81292"/>
          <exon e_start="82164" e_stop="82236"/>
          <exon e_start="82345" e_stop="82390"/>
          <exon e_start="82517" e_stop="82580"/>
          <exon e_start="84921" e_stop="84969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGAAATGGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTAGTAAGTTTCTCTTTCTCTTCCATTCTCTTTTTCTGCTCTGTAGATATGTAAAGATTGGTTTTTTCTTTCCTTTTTGTGAATTTCACGATCAAAGTAGAGTTTGGGAGCTGAAATGCCGGAATTGATGTTAGATGATTTATATTTTCAACTCCTACTAATTTGATGTTGAGATGCAGTTGATAGAATTGCAGTGTCTAGTTCATGTATAAAGTCAAGTACTTGCTGTTAGTTGTTTTTTTTTTCGTAACTTCTGTTAGAAATGGAAAATCTTGGTTGGTCAACTGTAGGAATGAAATAATGGAGTAGGGAATCAGACGAGAATGTTTGATTACCAAGTGCAATTTAGGGGTTTCCATTAAGACAAATTACGGTATATTTTGTGCTTTTTTATGTCGCTAATAAAAGTTTGGAGCAGTGGACTGACTGGTTAATCATACTTCTGGTAGGTTCGGTTAGATGGTTAGTATTTGGGAGTACTCCTTTTGTGTGTGCTTGTGAAGCTTATGACCTTTTCCAATAAGTAGATAAGTTTCATTGAAGGGTGTTTTTTCATACTTTGATTAATATGTGTTTCAGATACAGTATTTACCTAATACTGCATGTGTAGAGAACTGTTTTCCTCGTGGTGCTTGCTTAGTTGGCAGGACTTTTGGTTGAGTCTATGAGTTAACTATGTGCAGATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAA-GGTGTTCCATCTGATGAACTTTGTTGTAAATGGAGGTAAAGCGGACTCAGACTAAACAAACCGTCCAGCTCTTTTTCTTAATCTGGAATTTTGTTTTAAATGCAAATCTTTTGTTTTTCAGTTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAGGTAATATTCTTTCTTAAAAGTAACTTTTCAATTGTCAATATTTTTTCTTAATTATGTTCAGTTTGTTTTCAATAGAACGCGACAATATATGCAAACCTGAATATATTGCCTTTGTTCTTATCAGCCATTTAACTTTTTCTCTAATTATTGTTCTTTTCTTATAGTGCGTCAACTTACATAGGAACTATCAAAAATCAAAATTAGGTCAGAACTGTACCTAGAAAATTTATCACCTGATGGGACCATTTTCAAGTCAAGTGCATGATGTTACTTTTGCTGATTGGAGCTGTAGGCTTTCTTATATCTTTGACACTCTTAACTTTGAGCTTAATTTGACATTTTAGATTCCTTACCTTCTAATTTATTTATTCGGAAGGTCATCCTGCTCTCTTACAGCTAGTACAATCCAATAGCAGTTCAGCAATCCTTGTTTGTTAATGTGTGAGCTAATTGGATTGAAAGCACATTAGTATATACATTCTGTCTTTCAGATTCCAGTTTGAAGCTTATCACCTAGTTACTCATCTTTTACTTGCCCTAAAATTTTGGTTTGACTGTGATGGGCCGATGACATTGTTCAAGTGCTTAGTTCCTCTGCAGCCAGCAACACCGTAGTGTTACCATGTCAATCCTTTAGCTTTGACTATCATTTTATTGAGATGAATTTTCTGTTAGCAATAACGAATCTACTGAAAGCACCTCCCCTTTACGACTTCCGTGATCTCTTTCCTTCATTTGGGTGGGCTACTGATGGACCGTCACTTTTAGGCCGATGACGTGAGAAGTAGAAATAATAACATGCCACAACTGCCTCTTAAACTGCTGCCTAATTGTTAACTGATGTTAGATTTGCTTCACGATAACCAGGTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAGGCAAGTGAAGTTATAGCATCTTGCAGGCAAACTGTAAATCTATTGATTCTAACCCTTGCATTTATGTAATGGCAGGCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGATGCCATATACTTCATTCAGGTTTGCTACAAATGTATCCCCTGCTCATACGCTATTGGACATCATGGTTGTTCATATGGAAATATAATCGATCAAGTATTATTACTTATTTTTATTTTGTCTCTAGTAATATGTGAATTCCTTTAAGATTCTTTTACGCCAGTCAAACCCATCTACTTTTGGGTTCTATTTGATAACCCCTTGTATTTTGGTGGTGACAGGGGTGGATTAGTGTAGAAGTTATGGGTTCAACTGAAAAAGGGTTCCTGGAACCCAACATTAGCTCAAACCCTGTATATATGTTAAAAATTTTGTAAACAAGTAAACATAATAGATTTTGAACCCACTAAATCAATCGGGTTGTGGTAGAATTTCTGAGACACATAAAGTTCGAATCCTGGAGCCGCCTCATTGATCTGTGGGCATATGTGTGCTTCTCAATATGTGGAATTCTGAGATATTCTTCTTTCTCAAAATGTTATGCCGGGTTAACCTGGGGTAACATGCTAGGAGAAAAGTTTAATTCGGAGCTCTCCATCTACTTCCATTATCAAATATTCATAGCTTGGTTCCGGTTATACCTTTAATTATTTTTTCGAGAACCGATGGAATATCTTTCCAAGATCTTGCAATAAATTTTTACAGAACCATATGCAAATTTAGCCTTGAAATAGGGCTAGATTCTCCTAATCCCCATCCCCTGAGAACCCTATCTCTTCCCTTTCCTAAAGGATAGAGCATTTCTAAATAAATAAAGATGTCCATTGTTCTTGATTTCTTGGTGAACATTTCCTATCGACCCGCTTGTCTCAAAAGCTAAGAATCTTCTTCAGTCTTCCTGGTTTTATCTCAGGTAATAAACTAAATACAACTGAAAAATCGTTTTTGTCAGGCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCATTGGGAA-GATATTTATGGCAGGTGAATCTCTTATATATCAATTTTCTCCTTTTGCCCTATTTTACTGAAGGTTAGATCTGCTTTCAAAGTTTATTGCTTTCTTTAACCTTGCATGTTTATTTGGTGCAGTTGTATCAGTTATTGCAGCCTTGGGCTTTCTGCTATATGGTGGAAGGTGAATTTAAGTTCTAATTTTCTCTGTGCATTTATCTTCTAAAGCATTATTGATGATTCTTAGATGACCTTAGACATGATTAAATTTCATTGTTTTTCTTGTGGAATTTGTTTTTACAATCATCAGGTTATTTCTCATGCTGCGGCGCTTCCCTATTGAATCTAAAGGGAGGAGAAAGAAGCTTCATGAGGTTTGTGTACTATACATCTGTCTTCCTCTTTCTTTTTCTTTTTTTCTTTTCTTTTAACTGGTAAAGATTTTTACACTTTTATCTTCTTACTTTATGTATACAGAGGTTAGTGCTGTAGTTTGGCATAGAATACGTTTGCATGTAAGGCATAAGATGTATTCCTCACAAACTTAAGTTCTCCCTACAGCACCGAGAGGGAGAAACTTTTTAAACATGAAGTTTGATTAATTTCCTTGTCCTAAGAAGTCCTGCTAATTGTTCTGCTATATTATAATCTTAACTTGTGGTGAATGACTGCTATATTTAGTCCAGATAACATTTAAGTGGAGAGATAAGAGTAAGGCTATCTCTGAGATTGTATAATTTAATTCTAAAATGATAATTAACAAGAACAGATGGAACCTTGTTATGACATTCTTATTCAGACATTTTTATTCAGTGCGTGAAGGGGTAACCTTTTGGTCATGGATCCACTAAACTGTCAAAGGCTGGTGCATACTATCTTTTTCTATTTAGTTTGTGTCACATAATTTGTTTGACTTACACCATAAGCTCAACTCCAGCAAATTATTAATTTCTGTAGCTGCTATCTGATGGGACTGTTCAAAGTTGTTTGGATATACATAGACAGAAGATGTCAAGTAATAAAGATTGCCTAACAAAATGAGCAGGAATGTAACAAATTATAACATACAACATTAGGGTACCAACTGTTGATGTCTCCCTTCTCTAGATTCCTCTTTTTTGATGATTAAGTAAGATTTTATTAAACCATCTGCAGCACCAACAAGGTGTAAGAGTGCCCGATAGTAGCTAGAAATTTATTCCTTTAACAATATAAGGAGTCAATTAACTCCACTATATGGTCAAAATCACTAGCAGCATCCTGCTTCAAAAATTCATGTTCTGTAAGCATTTCAATATTACAAAAAATTAAGGAAGATGCTTTATCCTGAAAGCAGCTGCAGTTCCCTTTCTATATTAACCATCTGAAATAACATAGAGAGATTCTGTAAGTTCCTCTGTATATTTTTTAATAAGGTCCTCTGTTTCTTCTTTATTCCCTGCATTGTCATCTTTGTACTGCCTCTACCAGGCATCATCCAAACAATCCCAAACCGGTTTAGAAATATACACCAAGTTATCCATATGAATTTGCAACGTAGGAGTAACTGTCCAAATGATTTAAAGCCCTCTTTGCAGTAGTAGTATCTGCTGGAGAAGTGAAATCTTCCTCTGTGCTGGCTATCATATGTTACTATGTTTCATTCAAGGCTAATACCCAAAAAACAGCCACTTTGGGAGTAGCTCTGGTCCTCCAAGTCATCTTCCATGACTATTAGAGCCAATATTACCACATTCTTCCTTAACAACTAACTGTATCATGCTTTAGGTGAGAAGTTCGCATCATCCAATGATCCATTTCCATCACTCCCCCTAATTTAACAACTAGCACACACAGACTGTACCTAGTGTTGATGATTTTTTTAAGAAAAAAATTGATGATTTATTCTACATTGGAGATTCCAGCATTCTCCTTTGGAGGGTTCTCCAATGGTACGTCGAACACTCTTTGTTGATGACAAGATTATATTAACTTGGGAAGAGTTATTTCAGAGTTCTGGTTTCCAGTCATTTGTCTTGCCATAGTTTGTTCTTCTGCTGTTATCCACTTTGACCTTTCCATCTCTGCAAACTCTCCCCATGGATTTCCGATTCATCTTCCTAATACAACTCCATAAGATGTGACTGCTTTACTGCATCATTGTCCATCAATTCCATATTAATCTTTGATCATCCCTTCCACATCTTCTCTTTGTTTTCCATGGCCATTTGAACTTAAAAGACAATAAATAGTCTGAAGCTCTTCACTACTAGTCCCCAGTTGTTTGCTCATAAGTTAGAATACTTGCTAGACTCTTCATAAGCATTGACTGAAAACAAACTACTCTTGGCTGATTTCCTTTTCTTCTCTGTTGATGAATAAACAGGAAAAAAAATATCTTAGATTAGTCTGACTAGATGGAAACTCAATATTAACATATGATGTTTCTGAAGAAAGAATCTTTTTTATCATTATTTGTGAACCTAAGGAGTTCTTTTGTTCTTCAATGATCATTAGTGACCAACTCAAGAAAATGATTTATTGGTCTATCTGATTGTTCTAACATCGTCTTCTACATCACCAACCATTAAATGATGCTGCTGTGAATATGTTTGTGTTATCTGAAGTTCTAATGAATTGTTTCTAGGCATATGCATGCATGATAGGTCATGGCTTATAATTCTTAACATCTCTTACTGTAAATCATCTGATCTAATGTATGTATGTGAACACAGGTTGGATCGGTGACTGCCATATGTTTCACCTGTTTCCTCATTAGATGCT</genome_strand>
        <mrna_strand>GCTGAAATGACTAGGTTGCCACTTGGGTCGTCGCCGATTGACTTCGCCGGTCCGGCGACTAACTGGTGGGACGACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCTTATGCTCTTGTTTCAGCCGTTGCCCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAATTAATAAGGATCGATTTGAGGGTACCCGAGTATGGTTGGACAACACAAAATTGTGTTCCATCTGATGAACTTTGTTGTAAATGGAG......................................................................................TTCGTGCAATTGTCTTTGGATTTCACAAACAGGTTTTTCTGTTCCATTATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAG...........................................................................GCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCAATAAATGGTGCAATATACTTCATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTATCTGGGTTTACCTCTGGGTCAATGACAATAGCACAGTGGAATTCATTGGGAACGATATTTATGGCAG............................................................................................................TTGTATCAGTTATTGCAGCCTTGGGCTTTCTGCTATATGGTGGAAG..............................................................................................................................GTTATTTCTCATGCTGCGGCGCTTTCCTATTGAATCTAAAGGGAGGAGAAAGAAGCTTCATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGATCTGTGACTGCCATATGTTTCACCTGTTTCCTCATTAGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E267222" ref_strand="+" ref_description="SGN-E267222 	[cLEI-4-B3]">
      <seq>tgaaatggctaggttgccacttgggtcgtcgccgattgacatcgccggtccggtgaccaactggtgggaccacgtcaacgaatccgttcagtggcaagatgggattttctactccctttgtgcttcctatggtcttgtttcagcagttgccctaattcaattaatacgaattgatttgagggtacccgagtatggctggacaacacaaaaggtgttccatctgatgaactttgttgtaaatggagttcgtgcaattgtctttggatttcacaaacatgtttttctgctccattataaggtgctgactctggcaatattggacctaccagggctccttttcttttcaacattcacactccttgttctattttgggctgagatatatcaccaggctaggagtttaccaacagataagctcaggatttcttatattgccattaatggtgccatatacttcattcaggcctgtatctgggtttacctctggatcaatgacaatagcacagtggaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="78822" stop="82515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79122" g_stop="79275" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79276" i_stop="79955" i_length="680">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79956" g_stop="80046" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="245" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80047" i_stop="80132" i_length="86">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.847" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80133" g_stop="80185" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="298" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80186" i_stop="81052" i_length="867">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81053" g_stop="81145" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="391" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81146" i_stop="81220" i_length="75">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81221" g_stop="81292" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="463" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81293" i_stop="82163" i_length="871">
            <donor d_prob="0.942" d_score="0.98"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="82164" g_stop="82215" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="515" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E267222" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79122" e_stop="79275"/>
          <exon e_start="79956" e_stop="80046"/>
          <exon e_start="80133" e_stop="80185"/>
          <exon e_start="81053" e_stop="81145"/>
          <exon e_start="81221" e_stop="81292"/>
          <exon e_start="82164" e_stop="82215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATGGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTAGTAAGTTTCTCTTTCTCTTCCATTCTCTTTTTCTGCTCTGTAGATATGTAAAGATTGGTTTTTTCTTTCCTTTTTGTGAATTTCACGATCAAAGTAGAGTTTGGGAGCTGAAATGCCGGAATTGATGTTAGATGATTTATATTTTCAACTCCTACTAATTTGATGTTGAGATGCAGTTGATAGAATTGCAGTGTCTAGTTCATGTATAAAGTCAAGTACTTGCTGTTAGTTGTTTTTTTTTTCGTAACTTCTGTTAGAAATGGAAAATCTTGGTTGGTCAACTGTAGGAATGAAATAATGGAGTAGGGAATCAGACGAGAATGTTTGATTACCAAGTGCAATTTAGGGGTTTCCATTAAGACAAATTACGGTATATTTTGTGCTTTTTTATGTCGCTAATAAAAGTTTGGAGCAGTGGACTGACTGGTTAATCATACTTCTGGTAGGTTCGGTTAGATGGTTAGTATTTGGGAGTACTCCTTTTGTGTGTGCTTGTGAAGCTTATGACCTTTTCCAATAAGTAGATAAGTTTCATTGAAGGGTGTTTTTTCATACTTTGATTAATATGTGTTTCAGATACAGTATTTACCTAATACTGCATGTGTAGAGAACTGTTTTCCTCGTGGTGCTTGCTTAGTTGGCAGGACTTTTGGTTGAGTCTATGAGTTAACTATGTGCAGATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAGGTAAAGCGGACTCAGACTAAACAAACCGTCCAGCTCTTTTTCTTAATCTGGAATTTTGTTTTAAATGCAAATCTTTTGTTTTTCAGTTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAGGTAATATTCTTTCTTAAAAGTAACTTTTCAATTGTCAATATTTTTTCTTAATTATGTTCAGTTTGTTTTCAATAGAACGCGACAATATATGCAAACCTGAATATATTGCCTTTGTTCTTATCAGCCATTTAACTTTTTCTCTAATTATTGTTCTTTTCTTATAGTGCGTCAACTTACATAGGAACTATCAAAAATCAAAATTAGGTCAGAACTGTACCTAGAAAATTTATCACCTGATGGGACCATTTTCAAGTCAAGTGCATGATGTTACTTTTGCTGATTGGAGCTGTAGGCTTTCTTATATCTTTGACACTCTTAACTTTGAGCTTAATTTGACATTTTAGATTCCTTACCTTCTAATTTATTTATTCGGAAGGTCATCCTGCTCTCTTACAGCTAGTACAATCCAATAGCAGTTCAGCAATCCTTGTTTGTTAATGTGTGAGCTAATTGGATTGAAAGCACATTAGTATATACATTCTGTCTTTCAGATTCCAGTTTGAAGCTTATCACCTAGTTACTCATCTTTTACTTGCCCTAAAATTTTGGTTTGACTGTGATGGGCCGATGACATTGTTCAAGTGCTTAGTTCCTCTGCAGCCAGCAACACCGTAGTGTTACCATGTCAATCCTTTAGCTTTGACTATCATTTTATTGAGATGAATTTTCTGTTAGCAATAACGAATCTACTGAAAGCACCTCCCCTTTACGACTTCCGTGATCTCTTTCCTTCATTTGGGTGGGCTACTGATGGACCGTCACTTTTAGGCCGATGACGTGAGAAGTAGAAATAATAACATGCCACAACTGCCTCTTAAACTGCTGCCTAATTGTTAACTGATGTTAGATTTGCTTCACGATAACCAGGTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAGGCAAGTGAAGTTATAGCATCTTGCAGGCAAACTGTAAATCTATTGATTCTAACCCTTGCATTTATGTAATGGCAGGCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGATGCCATATACTTCATTCAGGTTTGCTACAAATGTATCCCCTGCTCATACGCTATTGGACATCATGGTTGTTCATATGGAAATATAATCGATCAAGTATTATTACTTATTTTTATTTTGTCTCTAGTAATATGTGAATTCCTTTAAGATTCTTTTACGCCAGTCAAACCCATCTACTTTTGGGTTCTATTTGATAACCCCTTGTATTTTGGTGGTGACAGGGGTGGATTAGTGTAGAAGTTATGGGTTCAACTGAAAAAGGGTTCCTGGAACCCAACATTAGCTCAAACCCTGTATATATGTTAAAAATTTTGTAAACAAGTAAACATAATAGATTTTGAACCCACTAAATCAATCGGGTTGTGGTAGAATTTCTGAGACACATAAAGTTCGAATCCTGGAGCCGCCTCATTGATCTGTGGGCATATGTGTGCTTCTCAATATGTGGAATTCTGAGATATTCTTCTTTCTCAAAATGTTATGCCGGGTTAACCTGGGGTAACATGCTAGGAGAAAAGTTTAATTCGGAGCTCTCCATCTACTTCCATTATCAAATATTCATAGCTTGGTTCCGGTTATACCTTTAATTATTTTTTCGAGAACCGATGGAATATCTTTCCAAGATCTTGCAATAAATTTTTACAGAACCATATGCAAATTTAGCCTTGAAATAGGGCTAGATTCTCCTAATCCCCATCCCCTGAGAACCCTATCTCTTCCCTTTCCTAAAGGATAGAGCATTTCTAAATAAATAAAGATGTCCATTGTTCTTGATTTCTTGGTGAACATTTCCTATCGACCCGCTTGTCTCAAAAGCTAAGAATCTTCTTCAGTCTTCCTGGTTTTATCTCAGGTAATAAACTAAATACAACTGAAAAATCGTTTTTGTCAGGCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCA</genome_strand>
        <mrna_strand>TGAAATGGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAG......................................................................................TTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAG...........................................................................GCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGGTGCCATATACTTCATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E267292" ref_strand="+" ref_description="SGN-E267292 	[cLEI-4-P10]">
      <seq>ggctaggttgccacttgggtcgtcgccgattgacatcgccggtccggtgaccaactggtgggaccacgtcaacgaatccgttcagtggcaagatgggattttctactccctttgtgcttcctatggtcttgtttcagcagttgccctaattcaattaatacgaattgatttgagggtacccgagtatggctggacaacacaaaaggtgttccatctgatgaactttgttgtaaatggagttcgtgcaattgtctttggatttcacaaacatgtttttctgctccattataaggtgctgactctggcaatattggacctaccagggctccttttcttttcaacattcacactccttgttctattttgggctgagatatatcaccaggctaggagtttaccaacagataagctcaggatttcttatattgccattaatggtgccatatacttcattcaggcctgtatctgggtttacctctggatcaatgacaatagcacagtggaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="78828" stop="82515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79128" g_stop="79275" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79276" i_stop="79955" i_length="680">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79956" g_stop="80046" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="239" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80047" i_stop="80132" i_length="86">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.847" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80133" g_stop="80185" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="292" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80186" i_stop="81052" i_length="867">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81053" g_stop="81145" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="385" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81146" i_stop="81220" i_length="75">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81221" g_stop="81292" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="457" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81293" i_stop="82163" i_length="871">
            <donor d_prob="0.942" d_score="0.98"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="82164" g_stop="82215" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="509" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E267292" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79128" e_stop="79275"/>
          <exon e_start="79956" e_stop="80046"/>
          <exon e_start="80133" e_stop="80185"/>
          <exon e_start="81053" e_stop="81145"/>
          <exon e_start="81221" e_stop="81292"/>
          <exon e_start="82164" e_stop="82215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTAGTAAGTTTCTCTTTCTCTTCCATTCTCTTTTTCTGCTCTGTAGATATGTAAAGATTGGTTTTTTCTTTCCTTTTTGTGAATTTCACGATCAAAGTAGAGTTTGGGAGCTGAAATGCCGGAATTGATGTTAGATGATTTATATTTTCAACTCCTACTAATTTGATGTTGAGATGCAGTTGATAGAATTGCAGTGTCTAGTTCATGTATAAAGTCAAGTACTTGCTGTTAGTTGTTTTTTTTTTCGTAACTTCTGTTAGAAATGGAAAATCTTGGTTGGTCAACTGTAGGAATGAAATAATGGAGTAGGGAATCAGACGAGAATGTTTGATTACCAAGTGCAATTTAGGGGTTTCCATTAAGACAAATTACGGTATATTTTGTGCTTTTTTATGTCGCTAATAAAAGTTTGGAGCAGTGGACTGACTGGTTAATCATACTTCTGGTAGGTTCGGTTAGATGGTTAGTATTTGGGAGTACTCCTTTTGTGTGTGCTTGTGAAGCTTATGACCTTTTCCAATAAGTAGATAAGTTTCATTGAAGGGTGTTTTTTCATACTTTGATTAATATGTGTTTCAGATACAGTATTTACCTAATACTGCATGTGTAGAGAACTGTTTTCCTCGTGGTGCTTGCTTAGTTGGCAGGACTTTTGGTTGAGTCTATGAGTTAACTATGTGCAGATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAGGTAAAGCGGACTCAGACTAAACAAACCGTCCAGCTCTTTTTCTTAATCTGGAATTTTGTTTTAAATGCAAATCTTTTGTTTTTCAGTTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAGGTAATATTCTTTCTTAAAAGTAACTTTTCAATTGTCAATATTTTTTCTTAATTATGTTCAGTTTGTTTTCAATAGAACGCGACAATATATGCAAACCTGAATATATTGCCTTTGTTCTTATCAGCCATTTAACTTTTTCTCTAATTATTGTTCTTTTCTTATAGTGCGTCAACTTACATAGGAACTATCAAAAATCAAAATTAGGTCAGAACTGTACCTAGAAAATTTATCACCTGATGGGACCATTTTCAAGTCAAGTGCATGATGTTACTTTTGCTGATTGGAGCTGTAGGCTTTCTTATATCTTTGACACTCTTAACTTTGAGCTTAATTTGACATTTTAGATTCCTTACCTTCTAATTTATTTATTCGGAAGGTCATCCTGCTCTCTTACAGCTAGTACAATCCAATAGCAGTTCAGCAATCCTTGTTTGTTAATGTGTGAGCTAATTGGATTGAAAGCACATTAGTATATACATTCTGTCTTTCAGATTCCAGTTTGAAGCTTATCACCTAGTTACTCATCTTTTACTTGCCCTAAAATTTTGGTTTGACTGTGATGGGCCGATGACATTGTTCAAGTGCTTAGTTCCTCTGCAGCCAGCAACACCGTAGTGTTACCATGTCAATCCTTTAGCTTTGACTATCATTTTATTGAGATGAATTTTCTGTTAGCAATAACGAATCTACTGAAAGCACCTCCCCTTTACGACTTCCGTGATCTCTTTCCTTCATTTGGGTGGGCTACTGATGGACCGTCACTTTTAGGCCGATGACGTGAGAAGTAGAAATAATAACATGCCACAACTGCCTCTTAAACTGCTGCCTAATTGTTAACTGATGTTAGATTTGCTTCACGATAACCAGGTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAGGCAAGTGAAGTTATAGCATCTTGCAGGCAAACTGTAAATCTATTGATTCTAACCCTTGCATTTATGTAATGGCAGGCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGATGCCATATACTTCATTCAGGTTTGCTACAAATGTATCCCCTGCTCATACGCTATTGGACATCATGGTTGTTCATATGGAAATATAATCGATCAAGTATTATTACTTATTTTTATTTTGTCTCTAGTAATATGTGAATTCCTTTAAGATTCTTTTACGCCAGTCAAACCCATCTACTTTTGGGTTCTATTTGATAACCCCTTGTATTTTGGTGGTGACAGGGGTGGATTAGTGTAGAAGTTATGGGTTCAACTGAAAAAGGGTTCCTGGAACCCAACATTAGCTCAAACCCTGTATATATGTTAAAAATTTTGTAAACAAGTAAACATAATAGATTTTGAACCCACTAAATCAATCGGGTTGTGGTAGAATTTCTGAGACACATAAAGTTCGAATCCTGGAGCCGCCTCATTGATCTGTGGGCATATGTGTGCTTCTCAATATGTGGAATTCTGAGATATTCTTCTTTCTCAAAATGTTATGCCGGGTTAACCTGGGGTAACATGCTAGGAGAAAAGTTTAATTCGGAGCTCTCCATCTACTTCCATTATCAAATATTCATAGCTTGGTTCCGGTTATACCTTTAATTATTTTTTCGAGAACCGATGGAATATCTTTCCAAGATCTTGCAATAAATTTTTACAGAACCATATGCAAATTTAGCCTTGAAATAGGGCTAGATTCTCCTAATCCCCATCCCCTGAGAACCCTATCTCTTCCCTTTCCTAAAGGATAGAGCATTTCTAAATAAATAAAGATGTCCATTGTTCTTGATTTCTTGGTGAACATTTCCTATCGACCCGCTTGTCTCAAAAGCTAAGAATCTTCTTCAGTCTTCCTGGTTTTATCTCAGGTAATAAACTAAATACAACTGAAAAATCGTTTTTGTCAGGCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCA</genome_strand>
        <mrna_strand>GGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAG......................................................................................TTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAG...........................................................................GCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGGTGCCATATACTTCATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E268235" ref_strand="+" ref_description="SGN-E268235 	[cLEM-3-E2]">
      <seq>gtcgccgattgacatcgccggtccggtgaccaactggtgggaccacgtcaacgaatccgttcagtggcaagatgggattttctactccctttgtgcttcctatggtcttgtttcagcagttgccctaattcaattaatacgaattgatttgagggtacccgagtatggctggacaacacaaaaggtgttccatctgatgaactttgttgtaaatggagttcgtgcaattgtctttggatttcacaaacatgtttttctgctccattataaggtgctgactctggcaatattggacctaccagggctccttttcttttcaacattcacactccttgttctattttgggctgagatatatcaccaggctaggagtttaccaacagataagctcaggatttcttatattgccattaatggtgccatatacttcattcaggcctgtatctgggtttacctctggatcaatgacaatagcacagtggaattcattgggaagatatttatggcagttgtatcagttattgcagccttgggctttctgctatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="78849" stop="82682"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79149" g_stop="79275" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79276" i_stop="79955" i_length="680">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.894" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79956" g_stop="80046" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="218" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80047" i_stop="80132" i_length="86">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.847" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80133" g_stop="80185" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="271" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80186" i_stop="81052" i_length="867">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81053" g_stop="81145" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="364" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81146" i_stop="81220" i_length="75">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81221" g_stop="81292" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="436" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81293" i_stop="82163" i_length="871">
            <donor d_prob="0.942" d_score="0.98"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="82164" g_stop="82236" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="509" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="82237" i_stop="82344" i_length="108">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="82345" g_stop="82382" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="547" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E268235" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268235" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79149" e_stop="79275"/>
          <exon e_start="79956" e_stop="80046"/>
          <exon e_start="80133" e_stop="80185"/>
          <exon e_start="81053" e_stop="81145"/>
          <exon e_start="81221" e_stop="81292"/>
          <exon e_start="82164" e_stop="82236"/>
          <exon e_start="82345" e_stop="82382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTAGTAAGTTTCTCTTTCTCTTCCATTCTCTTTTTCTGCTCTGTAGATATGTAAAGATTGGTTTTTTCTTTCCTTTTTGTGAATTTCACGATCAAAGTAGAGTTTGGGAGCTGAAATGCCGGAATTGATGTTAGATGATTTATATTTTCAACTCCTACTAATTTGATGTTGAGATGCAGTTGATAGAATTGCAGTGTCTAGTTCATGTATAAAGTCAAGTACTTGCTGTTAGTTGTTTTTTTTTTCGTAACTTCTGTTAGAAATGGAAAATCTTGGTTGGTCAACTGTAGGAATGAAATAATGGAGTAGGGAATCAGACGAGAATGTTTGATTACCAAGTGCAATTTAGGGGTTTCCATTAAGACAAATTACGGTATATTTTGTGCTTTTTTATGTCGCTAATAAAAGTTTGGAGCAGTGGACTGACTGGTTAATCATACTTCTGGTAGGTTCGGTTAGATGGTTAGTATTTGGGAGTACTCCTTTTGTGTGTGCTTGTGAAGCTTATGACCTTTTCCAATAAGTAGATAAGTTTCATTGAAGGGTGTTTTTTCATACTTTGATTAATATGTGTTTCAGATACAGTATTTACCTAATACTGCATGTGTAGAGAACTGTTTTCCTCGTGGTGCTTGCTTAGTTGGCAGGACTTTTGGTTGAGTCTATGAGTTAACTATGTGCAGATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAGGTAAAGCGGACTCAGACTAAACAAACCGTCCAGCTCTTTTTCTTAATCTGGAATTTTGTTTTAAATGCAAATCTTTTGTTTTTCAGTTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAGGTAATATTCTTTCTTAAAAGTAACTTTTCAATTGTCAATATTTTTTCTTAATTATGTTCAGTTTGTTTTCAATAGAACGCGACAATATATGCAAACCTGAATATATTGCCTTTGTTCTTATCAGCCATTTAACTTTTTCTCTAATTATTGTTCTTTTCTTATAGTGCGTCAACTTACATAGGAACTATCAAAAATCAAAATTAGGTCAGAACTGTACCTAGAAAATTTATCACCTGATGGGACCATTTTCAAGTCAAGTGCATGATGTTACTTTTGCTGATTGGAGCTGTAGGCTTTCTTATATCTTTGACACTCTTAACTTTGAGCTTAATTTGACATTTTAGATTCCTTACCTTCTAATTTATTTATTCGGAAGGTCATCCTGCTCTCTTACAGCTAGTACAATCCAATAGCAGTTCAGCAATCCTTGTTTGTTAATGTGTGAGCTAATTGGATTGAAAGCACATTAGTATATACATTCTGTCTTTCAGATTCCAGTTTGAAGCTTATCACCTAGTTACTCATCTTTTACTTGCCCTAAAATTTTGGTTTGACTGTGATGGGCCGATGACATTGTTCAAGTGCTTAGTTCCTCTGCAGCCAGCAACACCGTAGTGTTACCATGTCAATCCTTTAGCTTTGACTATCATTTTATTGAGATGAATTTTCTGTTAGCAATAACGAATCTACTGAAAGCACCTCCCCTTTACGACTTCCGTGATCTCTTTCCTTCATTTGGGTGGGCTACTGATGGACCGTCACTTTTAGGCCGATGACGTGAGAAGTAGAAATAATAACATGCCACAACTGCCTCTTAAACTGCTGCCTAATTGTTAACTGATGTTAGATTTGCTTCACGATAACCAGGTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAGGCAAGTGAAGTTATAGCATCTTGCAGGCAAACTGTAAATCTATTGATTCTAACCCTTGCATTTATGTAATGGCAGGCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGATGCCATATACTTCATTCAGGTTTGCTACAAATGTATCCCCTGCTCATACGCTATTGGACATCATGGTTGTTCATATGGAAATATAATCGATCAAGTATTATTACTTATTTTTATTTTGTCTCTAGTAATATGTGAATTCCTTTAAGATTCTTTTACGCCAGTCAAACCCATCTACTTTTGGGTTCTATTTGATAACCCCTTGTATTTTGGTGGTGACAGGGGTGGATTAGTGTAGAAGTTATGGGTTCAACTGAAAAAGGGTTCCTGGAACCCAACATTAGCTCAAACCCTGTATATATGTTAAAAATTTTGTAAACAAGTAAACATAATAGATTTTGAACCCACTAAATCAATCGGGTTGTGGTAGAATTTCTGAGACACATAAAGTTCGAATCCTGGAGCCGCCTCATTGATCTGTGGGCATATGTGTGCTTCTCAATATGTGGAATTCTGAGATATTCTTCTTTCTCAAAATGTTATGCCGGGTTAACCTGGGGTAACATGCTAGGAGAAAAGTTTAATTCGGAGCTCTCCATCTACTTCCATTATCAAATATTCATAGCTTGGTTCCGGTTATACCTTTAATTATTTTTTCGAGAACCGATGGAATATCTTTCCAAGATCTTGCAATAAATTTTTACAGAACCATATGCAAATTTAGCCTTGAAATAGGGCTAGATTCTCCTAATCCCCATCCCCTGAGAACCCTATCTCTTCCCTTTCCTAAAGGATAGAGCATTTCTAAATAAATAAAGATGTCCATTGTTCTTGATTTCTTGGTGAACATTTCCTATCGACCCGCTTGTCTCAAAAGCTAAGAATCTTCTTCAGTCTTCCTGGTTTTATCTCAGGTAATAAACTAAATACAACTGAAAAATCGTTTTTGTCAGGCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCATTGGGAAGATATTTATGGCAGGTGAATCTCTTATATATCAATTTTCTCCTTTTGCCCTATTTTACTGAAGGTTAGATCTGCTTTCAAAGTTTATTGCTTTCTTTAACCTTGCATGTTTATTTGGTGCAGTTGTATCAGTTATTGCAGCCTTGGGCTTTCTGCTATAT</genome_strand>
        <mrna_strand>GTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAG......................................................................................TTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAG...........................................................................GCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGGTGCCATATACTTCATTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCATTGGGAAGATATTTATGGCAG............................................................................................................TTGTATCAGTTATTGCAGCCTTGGGCTTTCTGCTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E594057" ref_strand="+" ref_description="SGN-E594057 	[37301]">
      <seq>atggcagttgtatcagttattgcagccttggggctttctgctatatggtggaaggttatttcgcatgctgcggcgctttcctattgaatctaaagggaggagaaagaagcttcatgaggttggatctgtgactgccatatgtttcacctgtttcctcattagatgctttgtggttgtgttatctgcttttgattctgacgcatctcttgacgtcttggaccatcctgttttgaatctgatatactacctgctagtagaaattcttccttcagctcttgtgctctacatcctgcgaaaattgcctccaaaaagagtgtctgcacaataccacccaatcagttagctgcagcagaattttatcgtcagtcatacacgttcccatggttgctgttgcagaagctaactggagttcttcaggaaaagtgaaactgcaaaaaagatattcagttgcaataattctgtggaaaggccaaagattcaacacttttttcgcagttgttaaacagaggttaagctgtttttcttacattatattgtttctgtggttgtagcgtgaagcatgagacgaataattgttccccacgtttgtgaaaaatatcctagtcatgatgtaatgatgcagagggtaatctcagttttcgccattgtactggccatattgtaactatgatgttctggatctcctttactgcaatgactgatgtcctttgtttggtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="82037" stop="86322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82230" g_stop="82236" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82237" i_stop="82344" i_length="108">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82345" g_stop="82390" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="54" r_length="47" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82391" i_stop="82516" i_length="126">
            <donor d_prob="0.987" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82517" g_stop="82580" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="118" r_length="64" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82581" i_stop="84920" i_length="2340">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84921" g_stop="84974" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="172" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84975" i_stop="85403" i_length="429">
            <donor d_prob="0.912" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85404" g_stop="85481" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="250" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85482" i_stop="85558" i_length="77">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85559" g_stop="86022" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="718" r_length="468" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="719" polyA_stop="728"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E594057" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E594057" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82230" e_stop="82236"/>
          <exon e_start="82345" e_stop="82390"/>
          <exon e_start="82517" e_stop="82580"/>
          <exon e_start="84921" e_stop="84974"/>
          <exon e_start="85404" e_stop="85481"/>
          <exon e_start="85559" e_stop="86022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCAGGTGAATCTCTTATATATCAATTTTCTCCTTTTGCCCTATTTTACTGAAGGTTAGATCTGCTTTCAAAGTTTATTGCTTTCTTTAACCTTGCATGTTTATTTGGTGCAGTTGTATCAGTTATTGCAGCCTT-GGGCTTTCTGCTATATGGTGGAAGGTGAATTTAAGTTCTAATTTTCTCTGTGCATTTATCTTCTAAAGCATTATTGATGATTCTTAGATGACCTTAGACATGATTAAATTTCATTGTTTTTCTTGTGGAATTTGTTTTTACAATCATCAGGTTATTTCTCATGCTGCGGCGCTTCCCTATTGAATCTAAAGGGAGGAGAAAGAAGCTTCATGAGGTTTGTGTACTATACATCTGTCTTCCTCTTTCTTTTTCTTTTTTTCTTTTCTTTTAACTGGTAAAGATTTTTACACTTTTATCTTCTTACTTTATGTATACAGAGGTTAGTGCTGTAGTTTGGCATAGAATACGTTTGCATGTAAGGCATAAGATGTATTCCTCACAAACTTAAGTTCTCCCTACAGCACCGAGAGGGAGAAACTTTTTAAACATGAAGTTTGATTAATTTCCTTGTCCTAAGAAGTCCTGCTAATTGTTCTGCTATATTATAATCTTAACTTGTGGTGAATGACTGCTATATTTAGTCCAGATAACATTTAAGTGGAGAGATAAGAGTAAGGCTATCTCTGAGATTGTATAATTTAATTCTAAAATGATAATTAACAAGAACAGATGGAACCTTGTTATGACATTCTTATTCAGACATTTTTATTCAGTGCGTGAAGGGGTAACCTTTTGGTCATGGATCCACTAAACTGTCAAAGGCTGGTGCATACTATCTTTTTCTATTTAGTTTGTGTCACATAATTTGTTTGACTTACACCATAAGCTCAACTCCAGCAAATTATTAATTTCTGTAGCTGCTATCTGATGGGACTGTTCAAAGTTGTTTGGATATACATAGACAGAAGATGTCAAGTAATAAAGATTGCCTAACAAAATGAGCAGGAATGTAACAAATTATAACATACAACATTAGGGTACCAACTGTTGATGTCTCCCTTCTCTAGATTCCTCTTTTTTGATGATTAAGTAAGATTTTATTAAACCATCTGCAGCACCAACAAGGTGTAAGAGTGCCCGATAGTAGCTAGAAATTTATTCCTTTAACAATATAAGGAGTCAATTAACTCCACTATATGGTCAAAATCACTAGCAGCATCCTGCTTCAAAAATTCATGTTCTGTAAGCATTTCAATATTACAAAAAATTAAGGAAGATGCTTTATCCTGAAAGCAGCTGCAGTTCCCTTTCTATATTAACCATCTGAAATAACATAGAGAGATTCTGTAAGTTCCTCTGTATATTTTTTAATAAGGTCCTCTGTTTCTTCTTTATTCCCTGCATTGTCATCTTTGTACTGCCTCTACCAGGCATCATCCAAACAATCCCAAACCGGTTTAGAAATATACACCAAGTTATCCATATGAATTTGCAACGTAGGAGTAACTGTCCAAATGATTTAAAGCCCTCTTTGCAGTAGTAGTATCTGCTGGAGAAGTGAAATCTTCCTCTGTGCTGGCTATCATATGTTACTATGTTTCATTCAAGGCTAATACCCAAAAAACAGCCACTTTGGGAGTAGCTCTGGTCCTCCAAGTCATCTTCCATGACTATTAGAGCCAATATTACCACATTCTTCCTTAACAACTAACTGTATCATGCTTTAGGTGAGAAGTTCGCATCATCCAATGATCCATTTCCATCACTCCCCCTAATTTAACAACTAGCACACACAGACTGTACCTAGTGTTGATGATTTTTTTAAGAAAAAAATTGATGATTTATTCTACATTGGAGATTCCAGCATTCTCCTTTGGAGGGTTCTCCAATGGTACGTCGAACACTCTTTGTTGATGACAAGATTATATTAACTTGGGAAGAGTTATTTCAGAGTTCTGGTTTCCAGTCATTTGTCTTGCCATAGTTTGTTCTTCTGCTGTTATCCACTTTGACCTTTCCATCTCTGCAAACTCTCCCCATGGATTTCCGATTCATCTTCCTAATACAACTCCATAAGATGTGACTGCTTTACTGCATCATTGTCCATCAATTCCATATTAATCTTTGATCATCCCTTCCACATCTTCTCTTTGTTTTCCATGGCCATTTGAACTTAAAAGACAATAAATAGTCTGAAGCTCTTCACTACTAGTCCCCAGTTGTTTGCTCATAAGTTAGAATACTTGCTAGACTCTTCATAAGCATTGACTGAAAACAAACTACTCTTGGCTGATTTCCTTTTCTTCTCTGTTGATGAATAAACAGGAAAAAAAATATCTTAGATTAGTCTGACTAGATGGAAACTCAATATTAACATATGATGTTTCTGAAGAAAGAATCTTTTTTATCATTATTTGTGAACCTAAGGAGTTCTTTTGTTCTTCAATGATCATTAGTGACCAACTCAAGAAAATGATTTATTGGTCTATCTGATTGTTCTAACATCGTCTTCTACATCACCAACCATTAAATGATGCTGCTGTGAATATGTTTGTGTTATCTGAAGTTCTAATGAATTGTTTCTAGGCATATGCATGCATGATAGGTCATGGCTTATAATTCTTAACATCTCTTACTGTAAATCATCTGATCTAATGTATGTATGTGAACACAGGTTGGATCGGTGACTGCCATATGTTTCACCTGTTTCCTCATTAGATGCTTTGTGGTAAGGCTTTATGTACCTGTTTCTTTCTCCCTATGCTGGTCAACCTTTTATCATCCAAAGTATAACAGTGTCCTAGCTCCATTATTAAGCTTTGCAAACTGGTTAACCAAATGAGACACTCTTAGCTTGTCTACGGGGAGGTCCAAGCAGGGAAATGAGGTTTTACACAATCGGTGCTTTAGTTTGTAAGAGGTGAAAACATTGAGGCTATCTTTATGAAATAAAGGGTTGCAACCTATGCCTTCCTTCAGGCTTCAGTCAAACCATAACTACTCCTGGGAACAAATAATAGGAAAAGGTAGACTAGAGAATAGGAACATGATCAAAAAAAGAGAAAGCATAGGTTTAAAGTAAAGCTAAACCGGCCTCAAATCTCTAACTCTCATGCACATGAGCTTGTTTTCTATGTCTAATCTTGGTTCGCTGCAGGTTGTGTTATCTGCTTTTGATTCTGACGCATCTCTTGACGTCTTGGATCATCCTGTTTTGAATCTGATATACTACCTGGTATGTATCATTTTCGTTATTTCATGTTCCTTGCGCTTACTGCTTTGTCTGAGTGATCACATTCTTCTCTGTGGCAGCTGGTAGAAATTCTTCCTTCAGCTCTTGTGCTGTACATCCTGCGAAAACTGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTTAGTGATACACGTTCCCATGGTTTCTGTTGCAGAAGCTAACTGGAGTTGTTCAGGAAAAGTGAAACTGC-AAAAGGATATTCGGTTGCAATAATTCTGCGGAAAGG-CAAAGATTCAACGCTTTTTTGGCAGTTGTTAAAACAGAGGTTAAGCTGTTTTGCTTACATTATATTGTTTCTGTGGTTTTAGTGTGAAGCATGAGACAAATAAGTGTTCCCCACGTCTGTG-AAAA-ATCCTAGTCATGATGTAATGACGCAGAGGGTAAATCTCAG-TATCGCCATTGTACTGG-CATGTTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTCA</genome_strand>
        <mrna_strand>ATGGCAG............................................................................................................TTGTATCAGTTATTGCAGCCTTGGGGCTTTCTGCTATATGGTGGAAG..............................................................................................................................GTTATTTCGCATGCTGCGGCGCTTTCCTATTGAATCTAAAGGGAGGAGAAAGAAGCTTCATGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGATCTGTGACTGCCATATGTTTCACCTGTTTCCTCATTAGATGCTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTTATCTGCTTTTGATTCTGACGCATCTCTTGACGTCTTGGACCATCCTGTTTTGAATCTGATATACTACCTG.............................................................................CTAGTAGAAATTCTTCCTTCAGCTCTTGTGCTCTACATCCTGCGAAAATTGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTCAGTCATACACGTTCCCATGGTTGCTGTTGCAGAAGCTAACTGGAGTTCTTCAGGAAAAGTGAAACTGCAAAAAAGATATTCAGTTGCAATAATTCTGTGGAAAGGCCAAAGATTCAACACTTTTTTCGCAGTTGTT-AAACAGAGGTTAAGCTGTTTTTCTTACATTATATTGTTTCTGTGGTTGTAGCGTGAAGCATGAGACGAATAATTGTTCCCCACGTTTGTGAAAAATATCCTAGTCATGATGTAATGATGCAGAGGGT-AATCTCAGTTTTCGCCATTGTACTGGCCATATTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E429869" ref_strand="-" ref_description="SGN-E429869 	[STM-52-D12]">
      <seq>agcttcatgaggttggatctgtgactgccatatgtttcacctgtttcctcattagatgctttgtggttgtgttatctgcttttgattctgatgcatctcttgacgtcttggaccatcctgttttgaatctgatatactacctgctagtagaaattcttccttcagctcttgtgctctacattctgcgaaaattgcctccaaaaagagtgtctgcacaataccacccaatcagttagctgcagcagaattttatcgtcagtcatacacgttcccatggttgctgttgcagaagctaactggagttcttcaggaaaagtgaaactgcaaaaaagatattcagttgcaataattctgtggaaaggccaaagattcaacacttttttcgcagttgttaaacagaggttaagctgtttttcttacattatattgtttctgtggttgtagcgtgaagcatgagacgaataattgttccccacgtttgtgaaaaatatcctagtcatgatgtaatgatgcagagggtaatctcagttttcgccattgtactggccatattgtaactatgatgttctggatctcctttactgcaatgactgatgtcctttgtttggtcaaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="84619" stop="128983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84921" g_stop="84974" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="65" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84975" i_stop="85403" i_length="429">
            <donor d_prob="0.912" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85404" g_stop="85481" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="143" r_length="78" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85482" i_stop="85558" i_length="77">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.931" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85559" g_stop="86022" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="611" r_length="468" r_score="0.922"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86023" i_stop="87616" i_length="1594">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.430" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87617" g_stop="87635" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="630" r_length="19" r_score="0.526"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E429869" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429869" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="84921" e_stop="84974"/>
          <exon e_start="85404" e_stop="85481"/>
          <exon e_start="85559" e_stop="86022"/>
          <exon e_start="87617" e_stop="87635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGATCGGTGACTGCCATATGTTTCACCTGTTTCCTCATTAGATGCTTTGTGGTAAGGCTTTATGTACCTGTTTCTTTCTCCCTATGCTGGTCAACCTTTTATCATCCAAAGTATAACAGTGTCCTAGCTCCATTATTAAGCTTTGCAAACTGGTTAACCAAATGAGACACTCTTAGCTTGTCTACGGGGAGGTCCAAGCAGGGAAATGAGGTTTTACACAATCGGTGCTTTAGTTTGTAAGAGGTGAAAACATTGAGGCTATCTTTATGAAATAAAGGGTTGCAACCTATGCCTTCCTTCAGGCTTCAGTCAAACCATAACTACTCCTGGGAACAAATAATAGGAAAAGGTAGACTAGAGAATAGGAACATGATCAAAAAAAGAGAAAGCATAGGTTTAAAGTAAAGCTAAACCGGCCTCAAATCTCTAACTCTCATGCACATGAGCTTGTTTTCTATGTCTAATCTTGGTTCGCTGCAGGTTGTGTTATCTGCTTTTGATTCTGACGCATCTCTTGACGTCTTGGATCATCCTGTTTTGAATCTGATATACTACCTGGTATGTATCATTTTCGTTATTTCATGTTCCTTGCGCTTACTGCTTTGTCTGAGTGATCACATTCTTCTCTGTGGCAGCTGGTAGAAATTCTTCCTTCAGCTCTTGTGCTGTACATCCTGCGAAAACTGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTTAGTGATACACGTTCCCATGGTTTCTGTTGCAGAAGCTAACTGGAGTTGTTCAGGAAAAGTGAAACTGC-AAAAGGATATTCGGTTGCAATAATTCTGCGGAAAGG-CAAAGATTCAACGCTTTTTTGGCAGTTGTTAAAACAGAGGTTAAGCTGTTTTGCTTACATTATATTGTTTCTGTGGTTTTAGTGTGAAGCATGAGACAAATAAGTGTTCCCCACGTCTGTG-AAAA-ATCCTAGTCATGATGTAATGACGCAGAGGGTAAATCTCAG-TATCGCCATTGTACTGG-CATGTTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTCAGTTTGTTCTAGTAATTTTACTCTTAGAACCGAGGAATTCTAAAGATTCAGTTACAGATGGTTCAAAATCCGGGTCGGTAACAGGTTTACTCGCTAATCAACATATCACACGATGCTGCTTGTACTACTCACTCGAAGCCCTTGGGGCACGGAGTTATTTCCAATTAACGGCAACAATTACACAACTTTGGGTGCAAAACTGATTCGTCATACAAAATATGGTGAACTGATGATAGAAAACATTCATTTTGCAGTTCTCCGAAACATTTTTGCTGCATGCATTGTTCTTTAACAGCTTTATTTTTATGTATATAATTGAGGTTACACAACAATCCTCATTAAACGCCAATGCGCACACGTATATGTACAGGAGTTCCTGCCTTAAACAGCAGGACCCGGTGGGTACAGCTAGTTTACAATAACCGGAAACCACAGCAAAATATATATATATATATATATATGTACTGGACTTCATGTATACAACCTACATAGATGAGATAGGTTTTCTTTGTCCTTTAAAATCTGGTTCCCCCTAAGTTGATGCATGCCATACCCCCAAAACTGGATTCAAAATTTCAGTTCAACCAGTTTTTGTTATATGTTCTGGACTGCATGTATACAACCTACATTGATGAGATAGGTTTTGTCCTTTAAAATCTGGTTTCCCTAAGTTGACGCATGACATACTCCAAAACTGGAGTTCATCAACCAGTTTTTGTTCGAGTCTCAATAATGCACGCACCTCTAATACCAAAAATCGGCCATTGGCTTCTAAGGGAAGGAGACACAACACCAATCAATTGAATTCTAAGACTTTTAACAGAGAAAAAACACTTCATATAGGCGAATTTTCTCTACCAGACAGCACTTCTCCAGTTCCAGATCTAAATTACAAAAAGCATTAATAACTAGCACAATCATCATCAACAACACCAACCCTGATTTCCTCCAACCAAATATCTACGGTCAATTTACAGAAACTGAAGACAGAGCCACTGGTTTACTTATAAAATTCTCTCATTGATTTGGTGGAACTTCATCAACAGGAGGAGCAGCGAAGCGAACATTAGCAGGGCGAGCCACCACTACCGGCTCATCAGCAAACAATGCTTTGATAACTGCTGGAGTTTTCAGGGGTCTACGACCAGTCATTCGCGGATAGACGTCTTCTAGGAAATAATAAGCATGGCCTGCAATCATTCCCTGAAACATGAAAGTTCACTTTCAGTATATAGCACCAACCCTGCATGTTATAGGGTGCGGTGAGTTTGGTAGGAGGAAAACATTTTCATGAAAATATATTAAGATTGTCGAAATTTTTGAAAAGTATTATCTCTAGAAATTATAAGTTCCCTTGAAAATGAGGAAAATGACTTCCCTAGTACAAGTCGGGAAAACAAGTTCCATAAGTGGCATTCCACATAATCGTTTCATCCCCACCCTCCAACACACACTACTTCCAACGTCATCCCCATCCCCCACACTTCTACCTTCTAACCCACCCCTAGAGTGTTTGTCTAGATTTTACAAAATATTTTCTGCTTACTCATCAAACACCAGAAAATAAGTAAAAATTCACTTATCTTATTTTTTAGGAAAACATTGTACAAGAAA</genome_strand>
        <mrna_strand>GTTGGATCTGTGACTGCCATATGTTTCACCTGTTTCCTCATTAGATGCTTTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTGTTATCTGCTTTTGATTCTGATGCATCTCTTGACGTCTTGGACCATCCTGTTTTGAATCTGATATACTACCTG.............................................................................CTAGTAGAAATTCTTCCTTCAGCTCTTGTGCTCTACATTCTGCGAAAATTGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTCAGTCATACACGTTCCCATGGTTGCTGTTGCAGAAGCTAACTGGAGTTCTTCAGGAAAAGTGAAACTGCAAAAAAGATATTCAGTTGCAATAATTCTGTGGAAAGGCCAAAGATTCAACACTTTTTTCGCAGTTGTT-AAACAGAGGTTAAGCTGTTTTTCTTACATTATATTGTTTCTGTGGTTGTAGCGTGAAGCATGAGACGAATAATTGTTCCCCACGTTTGTGAAAAATATCCTAGTCATGATGTAATGATGCAGAGGGT-AATCTCAGTTTTCGCCATTGTACTGGCCATATTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E574003" ref_strand="+" ref_description="SGN-E574003 	[33403]">
      <seq>cttggaccatcctgttttgaatctgatatactacctgctagtagaaattcttccttcagctctggtgctctacatcctgcgaaaattggcctccaaaaagagtgtctgcacaataccacccaatcagttagctgcagcagaattttatcgtcagtcatacacgttcccatggttgctgttgcagaagctaactggagttcttcaggaaaagtgaaactgcaaaaaagatattcagttgcaataattctgtggaaaggccaaagattcaacacttttttcgcagttgttaaacagaggttaagctgttttttcttacattatattgtttctgtggttgtagcgtgaagcatgagacgaataattgttccccacgtttgtgaaaaatatcctagtcatgatgtaatgatgcagagggtaatctcagttttcgccattgtactggccatattgtaactatgatgttctggatctcctttactgcaatgactgatgtcctttgtttggtcaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="85145" stop="128983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85445" g_stop="85481" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85482" i_stop="85558" i_length="77">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.931" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85559" g_stop="86022" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="507" r_length="470" r_score="0.914"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86023" i_stop="87616" i_length="1594">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.430" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87617" g_stop="87640" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="531" r_length="24" r_score="0.625"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E574003" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85445" e_stop="85481"/>
          <exon e_start="85559" e_stop="86022"/>
          <exon e_start="87617" e_stop="87640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGATCATCCTGTTTTGAATCTGATATACTACCTGGTATGTATCATTTTCGTTATTTCATGTTCCTTGCGCTTACTGCTTTGTCTGAGTGATCACATTCTTCTCTGTGGCAGCTGGTAGAAATTCTTCCTTCAGCTCTTGTGCTGTACATCCTGCGAAAACT-GCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTTAGTGATACACGTTCCCATGGTTTCTGTTGCAGAAGCTAACTGGAGTTGTTCAGGAAAAGTGAAACTGC-AAAAGGATATTCGGTTGCAATAATTCTGCGGAAAGG-CAAAGATTCAACGCTTTTTTGGCAGTTGTTAAAACAGAGGTTAAGCTG-TTTTGCTTACATTATATTGTTTCTGTGGTTTTAGTGTGAAGCATGAGACAAATAAGTGTTCCCCACGTCTGTG-AAAA-ATCCTAGTCATGATGTAATGACGCAGAGGGTAAATCTCAG-TATCGCCATTGTACTGG-CATGTTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTCAGTTTGTTCTAGTAATTTTACTCTTAGAACCGAGGAATTCTAAAGATTCAGTTACAGATGGTTCAAAATCCGGGTCGGTAACAGGTTTACTCGCTAATCAACATATCACACGATGCTGCTTGTACTACTCACTCGAAGCCCTTGGGGCACGGAGTTATTTCCAATTAACGGCAACAATTACACAACTTTGGGTGCAAAACTGATTCGTCATACAAAATATGGTGAACTGATGATAGAAAACATTCATTTTGCAGTTCTCCGAAACATTTTTGCTGCATGCATTGTTCTTTAACAGCTTTATTTTTATGTATATAATTGAGGTTACACAACAATCCTCATTAAACGCCAATGCGCACACGTATATGTACAGGAGTTCCTGCCTTAAACAGCAGGACCCGGTGGGTACAGCTAGTTTACAATAACCGGAAACCACAGCAAAATATATATATATATATATATATGTACTGGACTTCATGTATACAACCTACATAGATGAGATAGGTTTTCTTTGTCCTTTAAAATCTGGTTCCCCCTAAGTTGATGCATGCCATACCCCCAAAACTGGATTCAAAATTTCAGTTCAACCAGTTTTTGTTATATGTTCTGGACTGCATGTATACAACCTACATTGATGAGATAGGTTTTGTCCTTTAAAATCTGGTTTCCCTAAGTTGACGCATGACATACTCCAAAACTGGAGTTCATCAACCAGTTTTTGTTCGAGTCTCAATAATGCACGCACCTCTAATACCAAAAATCGGCCATTGGCTTCTAAGGGAAGGAGACACAACACCAATCAATTGAATTCTAAGACTTTTAACAGAGAAAAAACACTTCATATAGGCGAATTTTCTCTACCAGACAGCACTTCTCCAGTTCCAGATCTAAATTACAAAAAGCATTAATAACTAGCACAATCATCATCAACAACACCAACCCTGATTTCCTCCAACCAAATATCTACGGTCAATTTACAGAAACTGAAGACAGAGCCACTGGTTTACTTATAAAATTCTCTCATTGATTTGGTGGAACTTCATCAACAGGAGGAGCAGCGAAGCGAACATTAGCAGGGCGAGCCACCACTACCGGCTCATCAGCAAACAATGCTTTGATAACTGCTGGAGTTTTCAGGGGTCTACGACCAGTCATTCGCGGATAGACGTCTTCTAGGAAATAATAAGCATGGCCTGCAATCATTCCCTGAAACATGAAAGTTCACTTTCAGTATATAGCACCAACCCTGCATGTTATAGGGTGCGGTGAGTTTGGTAGGAGGAAAACATTTTCATGAAAATATATTAAGATTGTCGAAATTTTTGAAAAGTATTATCTCTAGAAATTATAAGTTCCCTTGAAAATGAGGAAAATGACTTCCCTAGTACAAGTCGGGAAAACAAGTTCCATAAGTGGCATTCCACATAATCGTTTCATCCCCACCCTCCAACACACACTACTTCCAACGTCATCCCCATCCCCCACACTTCTACCTTCTAACCCACCCCTAGAGTGTTTGTCTAGATTTTACAAAATATTTTCTGCTTACTCATCAAACACCAGAAAATAAGTAAAAATTCACTTATCTTATTTTTTAGGAAAACATTGTACAAGAAAAAAAT</genome_strand>
        <mrna_strand>CTTGGACCATCCTGTTTTGAATCTGATATACTACCTG.............................................................................CTAGTAGAAATTCTTCCTTCAGCTCTGGTGCTCTACATCCTGCGAAAATTGGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTCAGTCATACACGTTCCCATGGTTGCTGTTGCAGAAGCTAACTGGAGTTCTTCAGGAAAAGTGAAACTGCAAAAAAGATATTCAGTTGCAATAATTCTGTGGAAAGGCCAAAGATTCAACACTTTTTTCGCAGTTGTT-AAACAGAGGTTAAGCTGTTTTTTCTTACATTATATTGTTTCTGTGGTTGTAGCGTGAAGCATGAGACGAATAATTGTTCCCCACGTTTGTGAAAAATATCCTAGTCATGATGTAATGATGCAGAGGGT-AATCTCAGTTTTCGCCATTGTACTGGCCATATTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E353265" ref_strand="+" ref_description="SGN-E353265 	[cTOS-14-J6]">
      <seq>ctgttttgaatctgatatactacctgctggtagaaattcttccttcagctcttgtgctgtacatcctgcgaaaactgcctccaaaaagagtgtctgcacaataccacccaatcagttagctgcagcagaattttatcgttagtgatacacgttcccatggtttctgttgcagaagctaactggagttgttcaggaaaagtgaaactgcaaaaggatattcggttgcaataattctgcggaaaggcaaagattcaacgcttttttggcagttgttaaaacagaggttaagctgttttgcttacattatattgtttctgtggntttagtgtgaagcatgagacaaataagtgttccccacgtctgtgaaaaatcctagtcatgatgtaatgacgcagagggtaaatctcagtatcgccattgtactggcatgttgtaactatgatgttctggatctcctttactgcaatgactgatgtcctttgtttggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="85156" stop="86321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85456" g_stop="85481" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85482" i_stop="85558" i_length="77">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85559" g_stop="86021" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="489" r_length="463" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E353265" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85456" e_stop="85481"/>
          <exon e_start="85559" e_stop="86021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTTTGAATCTGATATACTACCTGGTATGTATCATTTTCGTTATTTCATGTTCCTTGCGCTTACTGCTTTGTCTGAGTGATCACATTCTTCTCTGTGGCAGCTGGTAGAAATTCTTCCTTCAGCTCTTGTGCTGTACATCCTGCGAAAACTGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTTAGTGATACACGTTCCCATGGTTTCTGTTGCAGAAGCTAACTGGAGTTGTTCAGGAAAAGTGAAACTGCAAAAGGATATTCGGTTGCAATAATTCTGCGGAAAGGCAAAGATTCAACGCTTTTTTGGCAGTTGTTAAAACAGAGGTTAAGCTGTTTTGCTTACATTATATTGTTTCTGTGGTTTTAGTGTGAAGCATGAGACAAATAAGTGTTCCCCACGTCTGTGAAAAATCCTAGTCATGATGTAATGACGCAGAGGGTAAATCTCAGTATCGCCATTGTACTGGCATGTTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTC</genome_strand>
        <mrna_strand>CTGTTTTGAATCTGATATACTACCTG.............................................................................CTGGTAGAAATTCTTCCTTCAGCTCTTGTGCTGTACATCCTGCGAAAACTGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTTAGTGATACACGTTCCCATGGTTTCTGTTGCAGAAGCTAACTGGAGTTGTTCAGGAAAAGTGAAACTGCAAAAGGATATTCGGTTGCAATAATTCTGCGGAAAGGCAAAGATTCAACGCTTTTTTGGCAGTTGTTAAAACAGAGGTTAAGCTGTTTTGCTTACATTATATTGTTTCTGTGGNTTTAGTGTGAAGCATGAGACAAATAAGTGTTCCCCACGTCTGTGAAAAATCCTAGTCATGATGTAATGACGCAGAGGGTAAATCTCAGTATCGCCATTGTACTGGCATGTTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E200967" ref_strand="+" ref_description="SGN-E200967 	[cLEC-5-I11]">
      <seq>caaaggacatcagtcattgcagtaaaggagatccagaacatcatagttacaacatgccagtacaatggcgatactgagatttaccctctgcgtcattacatcatgactaggatttttcacagacgtggggaacacttatttgtctcatgcttcacactaaaaccacagaaacaatataatgtaagcaaaacagcttaacctctgttttaacaactgccaaaaaagcgttgaatctttgcctttccgcagaattattgcaaccgaatatccttttgcagtttcacttttcctgaacaactccagttagcttctgcaacagaaaccatgggaacgtgtatcactaacgataaaattctgctgcagctaactgattgggtggtattgtgcagacactctttttggaggcagttttcgcaggatgtacagcacaagagctgaaggaagaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="86314" stop="85266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86014" g_stop="85566" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E200967" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86014" e_stop="85566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACGTGTATCACTAACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTCTTTTTGGAGGCAGTTTTCGCAGGATGTACAGCACAAGAGCTGAAGGAAGAATTT</genome_strand>
        <mrna_strand>CAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACGTGTATCACTAACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTCTTTTTGGAGGCAGTTTTCGCAGGATGTACAGCACAAGAGCTGAAGGAAGAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E458129" ref_strand="+" ref_description="SGN-E458129 	[cPRO-4-D10]">
      <seq>gtttttttttttttttttttgaccaaacaaaggacatcagtcattgcagtaaaggagatccagaacatcatagttacaatatggccagtacaatggcgaaaactgagattaccctctgcatcattacatcatgactaggatatttttcacaaacgtggggaacaattattcgtctcatgcttcacgctacaaccacagaaacaatataatgtaagaaaaacagcttaacctctgtttaacaactgcgaaaaaagtgttgaatctttggcctttccacagaattattgcaactgaatatcttttttgcagtttcacttttcctgaagaactccagttagcttctgcaacagcaaccatgggaacgtgtatgactgacgataaaattctgctgcagctaactgattgggtggtattgtgcagacactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="128983" stop="85320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86132" g_stop="86116" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="17" r_length="17" r_score="0.529"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86115" i_stop="86025" i_length="91">
            <donor d_prob="0.486" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86024" g_stop="85620" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="426" r_length="409" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E458129" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458129" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86132" e_stop="86116"/>
          <exon e_start="86024" e_stop="85620"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTGATATGTTGATTAGCGAGTAAACCTGTTACCGACCCGGATTTTGAACCATCTGTAACTGAATCTTTAGAATTCCTCGGTTCTAAGAGTAAAATTACTAGAACAAACTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACAT-GCCAGTACAATGGCG-ATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGG--ATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTT-GCCTTTCCGCAGAATTATTGCAACCGAATATC-CTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACGTGTATCACTAACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTC</genome_strand>
        <mrna_strand>GTTTTTTTTTTTTTTTT...........................................................................................TTTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAATATGGCCAGTACAATGGCGAAAACTGAGA-TTACCCTCTGCATCATTACATCATGACTAGGATATTTTTCACAAACGTGGGGAACAATTATTCGTCTCATGCTTCACGCTACAACCACAGAAACAATATAATGTAAGAAAAACAGCTTAACCTCTG-TTTAACAACTGCGAAAAAAGTGTTGAATCTTTGGCCTTTCCACAGAATTATTGCAACTGAATATCTTTTTTGCAGTTTCACTTTTCCTGAAGAACTCCAGTTAGCTTCTGCAACAGCAACCATGGGAACGTGTATGACTGACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E372563" ref_strand="+" ref_description="SGN-E372563 	[TUS-31-E9]">
      <seq>ttttttttttgaggattgttgtgtaacctcaattatatacataaaaataaagctgttaaagaacaatgcatgcagcaaaaatgtttcggagaactgcaaaatgaatgttttctatcatcagttcaccatattttgtatgacgaatcagttttgcacccaaagttgtgtaattgttgccgttaattggaaataactccgtgccccaagggcttcgagtgagtagtacaagcagcatcgtgtgatatgttgattagcgagtaaacctgttaccgacccggattttgaaccatctgtaactgaatctttagaattcctcggttctaagagtaaaattactagaacaaactgaccaaacaaaggacatcagtcattgcagtaaaggagatccagaacatcatagttacaacatgccagtacaatggcgatactgagatttaccctctgcgtcattacatcatgactaggatttttcacagacgtggggaacacttatttgtctcatgcttcacactaaaaccacagaaacaatataatgtaagcaaaacagcttaacctctgttttaacaactgccaaaaaagcgttgaatctttgcctttccgcagaattattgcaaccgaatatccttttgcagtttcacttttcctgaacaactccagttagcttctgcaacagaaaccatgggaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="86664" stop="85382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86368" g_stop="85682" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E372563" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86368" e_stop="85682"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGTTTAATGAGGATTGTTGTGTAACCTCAATTATATACATAAAAATAAAGCTGTTAAAGAACAATGCATGCAGCAAAAATGTTTCGGAGAACTGCAAAATGAATGTTTTCTATCATCAGTTCACCATATTTTGTATGACGAATCAGTTTTGCACCCAAAGTTGTGTAATTGTTGCCGTTAATTGGAAATAACTCCGTGCCCCAAGGGCTTCGAGTGAGTAGTACAAGCAGCATCGTGTGATATGTTGATTAGCGAGTAAACCTGTTACCGACCCGGATTTTGAACCATCTGTAACTGAATCTTTAGAATTCCTCGGTTCTAAGAGTAAAATTACTAGAACAAACTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACG</genome_strand>
        <mrna_strand>TTTTTTTTTTGAGGATTGTTGTGTAACCTCAATTATATACATAAAAATAAAGCTGTTAAAGAACAATGCATGCAGCAAAAATGTTTCGGAGAACTGCAAAATGAATGTTTTCTATCATCAGTTCACCATATTTTGTATGACGAATCAGTTTTGCACCCAAAGTTGTGTAATTGTTGCCGTTAATTGGAAATAACTCCGTGCCCCAAGGGCTTCGAGTGAGTAGTACAAGCAGCATCGTGTGATATGTTGATTAGCGAGTAAACCTGTTACCGACCCGGATTTTGAACCATCTGTAACTGAATCTTTAGAATTCCTCGGTTCTAAGAGTAAAATTACTAGAACAAACTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E395908" ref_strand="-" ref_description="SGN-E395908 	[TUS-18-F11]">
      <seq>gagcaagcaaaatccctttttccccaagggctttttggggtctgtttattttccccgcagcttacctcccatgggttcttttgcgcgcttttttgtgttagttggcgccagtgcttgggtggatttactgggaatgattgcaggccctgctttttttttcctagaagacgtctatccgcgaatgactggtcgtagacccctgaaaactccagcagttatcaaagccttgtttgctgatgagccggtagtggtggctccccctgctaatgttcgcttcgctgctcctcctgttgatgaagttcccccaaatcaatgagagaattttataagtaaacccgtggctctgttttcagtttttgtaaattgaccgtagatatttggttggaggaaatcagggttggtgttgttgatgatgattgtgctagttattaatgctttttgtaatttagatttggaactggagaagtgctgtttggtagagaaaattcgcctatatgaagtgttttttttctgtttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="91813" stop="45091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91513" g_stop="91441" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="0.88"/>
            <acceptor a_prob="0.997" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="130" r_length="56" r_score="0.852"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="0.83"/>
            <acceptor a_prob="0.988" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87224" g_stop="86836" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="519" r_length="389" r_score="0.967"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86835" i_stop="86044" i_length="792">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="86043" g_stop="86011" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="552" r_length="33" r_score="0.576"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E395908" ref_strand="-">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395908" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="91513" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="86836"/>
          <exon e_start="86043" e_stop="86011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAAGCAAAATCCATTTATCCACATGAGCTTTTT-GGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTG-G-GCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAAGTCTTAGAATTCAATTGATTGGTGTTGTGTCTCCTTCCCTTAGAAGCCAATGGCCGATTTTTGGTATTAGAGGTGCGTGCATTATTGAGACTCGAACAAAAACTGGTTGATGAACTCCAGTTTTGGAGTATGTCATGCGTCAACTTAGGGAAACCAGATTTTAAAGGACAAAACCTATCTCATCAATGTAGGTTGTATACATGCAGTCCAGAACATATAACAAAAACTGGTTGAACTGAAATTTTGAATCCAGTTTTGGGGGTATGGCATGCATCAACTTAGGGGGAACCAGATTTTAAAGGACAAAGAAAACCTATCTCATCTATGTAGGTTGTATACATGAAGTCCAGTACATATATATATATATATATATATTTTGCTGTGGTTTCCGGTTATTGTAAACTAGCTGTACCCACCGGGTCCTGCTGTTTAAGGCAGGAACTCCTGTACATATACGTGTGCGCATTGGCGTTTAATGAGGATTGTTGTGTAACCTCAATTATATACATAAAAATAAAGCTGTTAAAGAACAATGCATGCAGCAAAAATGTTTCGGAGAACTGCAAAATGAATGTTTTCTATCATCAGTTCACCATATTTTGTATGACGAATCAGTTTTGCACCCAAAGTTGTGTAATTGTTGCCGTTAATTGGAAATAACTCCGTGCCCCAAGGGCTTCGAGTGAGTAGTACAAGCAGCATCGTGTGATATGTTGATTAGCGAGTAAACCTGTTACCGACCCGGATTTTGAACCATCTGTAACTGAATCTTTAGAATTCCTCGGTTCTAAGAGTAAAATTACTAGAACAAACTGACCAAACAAA</genome_strand>
        <mrna_strand>GAGCAAGCAAAATCCCTTTTTCCCCAAGGGCTTTTTGGGGTCTGTTTATTTTCCCCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGCGCGCTTTTTTGTGTTAGTTGGCGCCAGTGCTTGGGTGGATTTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCCTGCTTTTTTTTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCCTTGTTTGCTGATGAGCCGGTAGTGGTGGCTCCCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCCCCAAATCAATGAGAGAATTTTATAAGTAAACCCGTGGCTCTGTTTTCAGTTTTTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATTTGGAACTGGAGAAGTGCTGTTTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTTTCTGTTTAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E344725" ref_strand="+" ref_description="SGN-E344725 	[cTOF-21-K10]">
      <seq>tggatctactgggaatgattgcaggccatgcttattatttcctagaagacgtctatccgcgaatgactggtcgtagacccctgaaaactccagcagttatcaaagcattgtttgctgatgagccggtagtggtggctcgccctgctaatgttcgcttcgctgctcctcctgttgatgaagttccaccaaatcaatgagagaattttataagtaaaccagtggctctgtcttcagtttctgtaaattgaccgtagatatttggttggaggaaatcagggttggtgttgttgatgatgattgtgctagttattaatgctttttgtaatttagatctggaactggagaagtgctgtctggtagagaaaattcgcctatatgaagtgttttttctctgttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="87529" stop="45091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87224" g_stop="86836" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="400" r_length="389" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86835" i_stop="86335" i_length="501">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.54"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86334" g_stop="86287" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="448" r_length="48" r_score="0.542"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E344725" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87224" e_stop="86836"/>
          <exon e_start="86334" e_stop="86287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAAGTCTTAGAATTCAATTGATTGGTGTTGTGTCTCCTTCCCTTAGAAGCCAATGGCCGATTTTTGGTATTAGAGGTGCGTGCATTATTGAGACTCGAACAAAAACTGGTTGATGAACTCCAGTTTTGGAGTATGTCATGCGTCAACTTAGGGAAACCAGATTTTAAAGGACAAAACCTATCTCATCAATGTAGGTTGTATACATGCAGTCCAGAACATATAACAAAAACTGGTTGAACTGAAATTTTGAATCCAGTTTTGGGGGTATGGCATGCATCAACTTAGGGGGAACCAGATTTTAAAGGACAAAGAAAACCTATCTCATCTATGTAGGTTGTATACATGAAGTCCAGTACATATATATATATATATATATATTTTGCTGTGGTTTCCGGTTATTGTAAACTAGCTGTACCCACCGGGTCCTGCTGTTTAAGGCAGGAACTCCTGTACATATACGTGTGCGCATTGGCGTTTAATGAGGATTGTTGTGTAACCTCAATTATATACATAAAAATAAAGCTGTTAAAGAACAATGCATGCAGCAAAAAT</genome_strand>
        <mrna_strand>GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E551640" ref_strand="+" ref_description="SGN-E551640 	[cTSB-1-G1]">
      <seq>gcaaaatccatttatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttgggcttctctgtgctagttggcgccagtgcttgggtggatctactgggaatgattgcaggccatgcttattatttcctagaagacgtctatccgcgaatgactggtcgtagacccctgaaaactccaacagttataaaagcattgtttgctgatgagccggtagtggtggctcgccctgctaatgttcgcttcgctgctcctcctgttgatgaagttccaccaaatcaatgagagaattttataagtaaaccagtggctctgtcttcagtttctgtaaattgaccgtagatatttggttggaggaaatcagggttggtgttgttgatgatgattgtgctagttattaatgctttttgtaatttagatctggaactggagaagtgctgtctggtagagaaaattcgcctatatgaagtgttttttctctgttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaattcaagggggggcccccgggggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="91807" stop="45091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91507" g_stop="91441" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="121" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87224" g_stop="86836" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="510" r_length="389" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86835" i_stop="86554" i_length="282">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.101" a_score="0.45"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="86553" g_stop="86510" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="553" r_length="43" r_score="0.455"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="86509" i_stop="86430" i_length="80">
            <donor d_prob="0.492" d_score="0.45"/>
            <acceptor a_prob="0.941" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="86429" g_stop="86410" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="573" r_length="20" r_score="0.400"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E551640" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91507" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="86836"/>
          <exon e_start="86553" e_stop="86510"/>
          <exon e_start="86429" e_stop="86410"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAAGTCTTAGAATTCAATTGATTGGTGTTGTGTCTCCTTCCCTTAGAAGCCAATGGCCGATTTTTGGTATTAGAGGTGCGTGCATTATTGAGACTCGAACAAAAACTGGTTGATGAACTCCAGTTTTGGAGTATGTCATGCGTCAACTTAGGGAAACCAGATTTTAAAGGACAAAACCTATCTCATCAATGTAGGTTGTATACATGCAGTCCAGAACATATAACAAAAACTGGTTGAACTGAAATTTTGAATCCAGTTTTGGGGGTATGGCATGCATCAACTTAGGGGGAACCAGATTTTAAAGGACAAAGAAAACCTATCTCATCTATGTAGGTTGTATACATGAAGTCCAGTACATATATATATATATATATATATTTTGCTGTGGTTTCCGGTTATTGTAAACTAGCTGTACCCACCGGGTCCTGC</genome_strand>
        <mrna_strand>GCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAACAGTTATAAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAA..........................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT-TCAAGGGG................................................................................GGGCCCCCGGGGGGGGGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E369435" ref_strand="-" ref_description="SGN-E369435 	[TUS-23-M9]">
      <seq>gtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccttatgtctcagagtcatttgcaaggatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccatttatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttgggcttctctgtgctagttggcgccagtgcttgggtggatctactgggaatgattgcaggccatgcttattatttcctagaagacgtctatccgcgaatgactggtcgtagacccctgaaaactccagcagttatcaaagcattgtttgctgatgagccggtagtggtggctcgccctgctaatgttcgcttcgctgctcctcctgttgatgaagttccaccaaatcaatgagagaattttataagtaaaccagtggctctgtcttcagtttctgtaaattgaccgtagatatttggttggaggaaatcagggttggtgttgttgatgatgattgtgctagttattaatgctttttgtaatttagatctggaactggagaagtgctgtctggtagagaaaattcgcctatatgaagtgttttttctctgttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="92121" stop="86536"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91821" g_stop="91620" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="202" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="286" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="340" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87224" g_stop="86831" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="734" r_length="394" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E369435" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369435" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="91821" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="86831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAAGTCTT</genome_strand>
        <mrna_strand>GTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E379217" ref_strand="-" ref_description="SGN-E379217 	[TUS-3-B2]">
      <seq>ttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccttatgtctcagagtcatttgcaaggatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccatttatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttgggcttctctgtgctagttggcgccagtgcttgggtggatctactgggaatgattgcaggccatgcttattatttcctagaagacgtctatccgcgaatgactggtcgtagacccctgaaaactccagcagttatcaaagcattgtttgctgatgagccggtagtggtggctcgccctgctaatgttcgcttcgctgctcctcctgttgatgaagttccaccaaatcaatgagagaattttataagtaaaccagtggctctgtcttcagtttctgtaaattgaccgtagatatttggttggaggaaatcagggttggtgttgttgatgatgattgtgctagttattaatgcttttggtaatttagatctggaacttcagaagtgcgactggtagagaaaattcgcctatatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="92135" stop="86556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="227" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="311" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="365" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87224" g_stop="86856" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="733" r_length="368" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E379217" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379217" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="86856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAA</genome_strand>
        <mrna_strand>ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTGGTAATTTAGATCTGGAACTTCAGAAGTGC-GACTGGTAGAGAAAATTCGCCTATATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E549612" ref_strand="-" ref_description="SGN-E549612 	[TUS-6-B10]">
      <seq>aggggaaggacggcagatttcttctacatgctcttgttggtgcccactgttttaacaggaattgttcttgtcggggggatgataccttatgtctcagagtcatttgcaaggatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccatttatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttgggcttctctgtgctagttggcgccagtgcttgggtggatctactgggaatgattgcaggccatgcttattatttcctagaagacgtctatccgcgaatgactggtcgtagacccctgaaaactccagcagttatcaaagcattgtttgctgatgagccggtagtggtggctcgccctgctaatgttcgcttcgctgctcctcctgttgatgaagttccaccaaatcaatgagagaattttataagtaaaccagtggctctgtcttcagtttctgtaaattgaccgtagatatttggttggaggaaatcagggttggtgttgttgatgatgattgtgctagttattaatgcttgtttaatttagatctggaactggagaagtgattcggtagagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="92066" stop="86571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91766" g_stop="91620" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="231" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="285" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87224" g_stop="86871" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="636" r_length="351" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E549612" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549612" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="91766" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="86871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAA</genome_strand>
        <mrna_strand>AGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTGGTGCCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTGTT-TAATTTAGATCTGGAACTGGAGAAGTGAT-TC-GGTAGAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E610627" ref_strand="+" ref_description="SGN-E610627 	[57791]">
      <seq>cgaatgactggtcgtagacccctgaaaacaccagcagttatcaaagcattgtttgctgacgagccagtagtggtggctcgacctgctaatgttcgcttcgctgctcctcctgttgatgaagttccaccaaatcaatgagataattttataagtaaaccagtggctctgtcttcagttcctgtaaattgaccttagatatttggttggagggaatcagggttggtcttgttgatgatgattgtcctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="87476" stop="86630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87176" g_stop="86930" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E610627" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>247</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E610627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87176" e_stop="86930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAG</genome_strand>
        <mrna_strand>CGAATGACTGGTCGTAGACCCCTGAAAACACCAGCAGTTATCAAAGCATTGTTTGCTGACGAGCCAGTAGTGGTGGCTCGACCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGATAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTCCTGTAAATTGACCTTAGATATTTGGTTGGAGGGAATCAGGGTTGGTCTTGTTGATGATGATTGTCCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E559813" ref_strand="+" ref_description="SGN-E559813 	[19369]">
      <seq>caggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccgtatgtctcagagtcatttgcaaagatcatgattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccgtatatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttggggttctctgtgcttgttggcgccagtgcttggggggatctactgggaatgattgcaggccatgcttattatttcctagaaggcgtctatccgcgaatgactggtcgtagacccctgaaaacaccagcagttatcaaagcattgtttgctgacgagccagtagtggtggctcgacctgctaatgttcgcttcgctgctcctcctgttgatgaagttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="92869" stop="86752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92569" g_stop="92524" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="262" r_length="216" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.94"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="346" r_length="84" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="400" r_length="54" r_score="0.944"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87224" g_stop="87052" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="573" r_length="173" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E559813" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E559813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92569" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="87052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCAT-ATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCC</genome_strand>
        <mrna_strand>CAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCGTATGTCTCAGAGTCATTTGCAAAGATCATGATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCGTATATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGGTTCTCTGTGCTTGTTGGCGCCAGTGCTTGGGGGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGGCGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACACCAGCAGTTATCAAAGCATTGTTTGCTGACGAGCCAGTAGTGGTGGCTCGACCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E258643" ref_strand="+" ref_description="SGN-E258643 	[cLEG-50-C20]">
      <seq>ccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccttatgtctcagagtcatttgcaaggatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccatttatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttgggcttctctgtgctagttggcgccagtgcttgggtggatctactgggaatgattgcangccatgcttattatttcctagaagacgtctatccgcgaatgactggtcgtagaccccctgaaactccagcagttatcaaagcattgtttgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94099" stop="86818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93799" g_stop="93737" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="163" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="378" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="462" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="516" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87224" g_stop="87118" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="623" r_length="107" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E258643" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93799" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="87118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGA</genome_strand>
        <mrna_strand>CCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCANGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCCTGAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E453648" ref_strand="+" ref_description="SGN-E453648 	[cSTS-20-N21]">
      <seq>gctaaataaaatccaatcacatacatatatatacatattatatgcatgtgagtgtgtatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaaacagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggatgataccgtatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccgtatatccacatgagctttttggggtctgtttactttcaccgcagcttacctcccatgggttcttttggggttctctgtgcttgttggcgccagtgcttggggggatctactgggaatgattgcaggccatgcttattatttcctagaaggcgtctatccgcgaatgactggtcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="86862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94019" g_stop="93737" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="370" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91765" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="440" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91764" i_stop="91692" i_length="73">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91691" g_stop="91620" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="512" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="597" r_length="85" r_score="0.952"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="651" r_length="54" r_score="0.944"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87224" g_stop="87162" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="714" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E453648" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.017" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94019" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91765"/>
          <exon e_start="91691" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="87162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTT-GGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGT</genome_strand>
        <mrna_strand>GCTAAATAAAATCCAATCACATACATAT--AT--ATACATATTATATGCATGTGAGTGTG------TAT--ATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTT-TTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAACAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAG.........................................................................GGGATGATACCGTATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCGTATATCCACATGAGCTTTTTGGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGGTTCTCTGTGCTTGTTGGCGCCAGTGCTTGGGGGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGGCGTCTATCCGCGAATGACTGGTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E424992" ref_strand="+" ref_description="SGN-E424992 	[STM-44-K24]">
      <seq>gctaaataaaatccaatcacatacatatatatacatattatatgtatgtgagtgtgtatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaaacagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggatgataccgtatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccgtatatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttggggttctctgtgcttgttggcgccagtgcttggggggatctactgggaatgattgcaggccatgcttattatttcctagaaggcgtctatccgcgaatgactggtcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="86862"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94019" g_stop="93737" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="370" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91765" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="440" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91764" i_stop="91692" i_length="73">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91691" g_stop="91620" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="512" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="596" r_length="84" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="650" r_length="54" r_score="0.944"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87224" g_stop="87162" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="713" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E424992" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E424992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94019" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91765"/>
          <exon e_start="91691" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="87162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGT</genome_strand>
        <mrna_strand>GCTAAATAAAATCCAATCACATACATAT--AT--ATACATATTATAT----GT-A-TGTG-A-GTGTGTATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTT-TTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAACAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAG.........................................................................GGGATGATACCGTATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCGTATATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGGTTCTCTGTGCTTGTTGGCGCCAGTGCTTGGGGGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGGCGTCTATCCGCGAATGACTGGTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E401826" ref_strand="+" ref_description="SGN-E401826 	[PPC-5-O6]">
      <seq>gatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccatatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgacttttatgatggnttatgtatggagcaagcaaaatccgtatatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatggggaatgattgcaggccatgcttattatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94146" stop="86895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93846" g_stop="93737" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="210" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="425" r_length="215" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="509" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91440" i_stop="87225" i_length="4216">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87224" g_stop="87195" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="539" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E401826" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E401826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93846" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="87224" e_stop="87195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTATTTC</genome_strand>
        <mrna_strand>GATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCATATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GNTTATGTATGGAGCAAGCAAAATCCGTATATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E405854" ref_strand="+" ref_description="SGN-E405854 	[PPI-1-F24]">
      <seq>gtgagtggtgtatatttattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagttgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccatatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccgtatatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttggggttctctgtgcttgttggcgccagtgcttggggggatctactgggaatgattgcaggccatgcttatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94253" stop="86899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93962" g_stop="93737" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="325" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="540" r_length="215" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="624" r_length="84" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88279" g_stop="88226" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="678" r_length="54" r_score="0.944"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001">
            <donor d_prob="0.981" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87224" g_stop="87199" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="679" r_stop="704" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E405854" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93962" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88226"/>
          <exon e_start="87224" e_stop="87199"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTGGTACGCTTCTGGTGACTCATGTGCTTTTATTAGGTTTTACTTGTTTCATGCTACTATATGAGACTCTTAAGAGTTTGAGTTAAATGGTTTTTGCTCCTGCTTGAGCCTCCCTGTTGGATATCTTGAAGAGTTGAATCTTTGATAAAAGTTCTGGTAGCCTGGATGTTCTTACTTTTTTTCATTTAGTGAGAGAGATTCATCACTTTTCTGCTTTCCCCAACTACAAAGATGTGTCGATGCCTTCACCAACCAGCCATATTTATGTTTTCTACTGAGGATTTTGTCCAAGGTGATAAACCCCCAAAACTGGATGCTGATCTGTAGTATAGTGGTAAAAAAGTTCTTGTTTGTCAAAGAAGATATGGACTCTTGCACATCTATCGTTCACTAGTTTCTTTCTGTTACAATGTATTGTTATGCTTTTCTGTGTAGACCTTTCTACCTGCACTGGTGCCTGTTGTTTTTATGCCATCACTCAGTTACCTTGCATTTTAAACTTCCTTTAGTGGGGTTTGAATATTCCAGTTTCCTTTCGTTGAACTTTATGTGTGCATTTGTTACGAAGGAAAATGTTTTTTTTTGAAGATTTTTTTCTTGTACAATGTTTTCCTAAAAAATAAGATAAGTGAATTTTTACTTATTTTCTGGTGTTTGATGAGTAAGCAGAAAATATTTTGTAAAATCTAGACAAACACTCTAGGGGTGGGTTAGAAGGTAGAAGTGTGGGGGATGGGGATGACGTTGGAAGTAGTGTGTGTTGGAGGGTGGGGATGAAACGATTATGTGGAATGCCACTTATGGAACTTGTTTTCCCGACTTGTACTAGGGAAGTCATTTTCCTCATTTTCAAGGGAACTTATAATTTCTAGAGATAATACTTTTCAAAAATTTCGACAATCTTAATATATTTTCATGAAAATGTTTTCCTCCTACCAAACTCACCGCACCCTATAACATGCAGGGTTGGTGCTATATACTGAAAGTGAACTTTCATGTTTCAGGGAATGATTGCAGGCCATGCTTATTA</genome_strand>
        <mrna_strand>GTG-AGTGGTGTATATTTATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCATATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCGTATATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGGTTCTCTGTGCTTGTTGGCGCCAGTGCTTGGGGGGATCTACTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGATTGCAGGCCATGCTTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E379093" ref_strand="+" ref_description="SGN-E379093 	[TUS-3-B2]">
      <seq>tccgatcacatatatatacatacatacatattatatacacgtgagtgtgtatatatatatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgattaagcggaatggcacaagctgtggaagaatggtacaagcagatgccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccttatgtctcagagtcatttgcaaggatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcnaaatccatttatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttgggcttctctgtgctagttggcgccagtgcttgggtggatctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94308" stop="87927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94008" g_stop="93737" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="372" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="587" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="671" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88279" g_stop="88227" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="724" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E379093" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94008" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACT</genome_strand>
        <mrna_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCNAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E369436" ref_strand="+" ref_description="SGN-E369436 	[TUS-23-M9]">
      <seq>tccgatcacatatatatacatacatacatattatatacacgtgagtgtgtatatatatatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgattaagcggaatggcacaagctgtggaagaatggtacaagcagatgccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccttatgtctcagagtcatttgcaaggatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccatttatccacatgagctttttgggtctgtttactttcaccgcagcttacctcccatgggttcttttgggcttctctgtgctagttggcgccagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94308" stop="87944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94008" g_stop="93737" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="372" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="587" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="671" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88279" g_stop="88244" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="707" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E369436" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94008" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
          <exon e_start="88279" e_stop="88244"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGGGTTAGTGTTTATTACTTAATCCATCATACTTTGCTTCACAAATCTTTAGCTTTTAAATTTAATAGCTGCCTCACCTGTGGTTTGTCCCCTTGCATCTTTGTGTTTCTTCTGCTAGATATGAAATTATCAATTTGCCATTTCTTTAATGAATCCTGAAGTAGCAGGTGTTTTATGACACTTGCTCCTGGTGTTTCCATACTAGAGCTGAGCTGCTAAAGCCACTCTAAAAGTATATGCTGCGACCAGACACATTGCAGAAACCACTTGGTTCCTTTTTTTCGTTCGATTTTTTCAGAAAGAGCAGTACTTCAAAGCTCATGCCTTGTGTATTTGGTTTTCCTTATTTATATGTTTTAAGGAAGATTTGGTTTAGTGCATTTTACAGATGAAAATGCACATATAATAAACAAGGAAAATCTCTTGGGCCAATTTGACTTGGCTTAAATAAAGTGCTTTTTAAAAGTATTTTTCAAAAAGTCATACTTCATAATTTTTAAGTTAAAAAATGAAAGTAGTATCCAACTTTTAAGCCAAGTCAGAACACCCTCTTGTACTCTCTGTGGTACAGAGGACTTGTGTTGAAATGGTCTACTTATGCTAGCATGGTCAATGATGCTTTTGACGTGAGTTGCTTGGAAATAGAACTCTGGTCAAAATCTGCCAGATATCTTTTCTGCTTTATTGTGGGTTCCATGACCGCAGCTGGTTTGGATTTGACTATGCCTCTCACAATAAGACAGTGGGCTTAAAACATGGCAAGTAACTTTGTTAAACAAATAATGTTTGATAGCAGACAATTAATTTGAAAAAATGGTAAATTTATAAAGAGTACTGGTTTAAGTCTTCAAAGAAAATAATATTACCTTCTAAAAAAAAACCTCTTCAAAGAAAATATGTAGGGGAAAGGAATTCGTACATGTGTGTGTTGTAAATTGAGAGGTTAAATGACCACCCAGGGGAGTAGCTACACTATACCGAGGGTGGTTAGCTGGACATACATCGTCGGAAAATTTTATCGGACATATAGGTGAAATTTTGTAATTTAGGTTATATATAACACAATGTACACCCTTCGAACAATTGTGTTCCACGACTCAGTGGTGAAGGATGCCCAGTGTGTGTCAGGCACTGCGGGTTCGAATCTTCGATGAAGCAGTGGATAGGCTCTCTTTTTTACTATTAAAAACAAAGCTGTTTGACAAGCACTGGATTTGCCTTTATTACTTTCTATTCTTTCTAAAAGATAAGGATATATTATTGAAAAGTATATTTCTAAACAAACCCTTCTTTCTAAATATTTATCTTAATATATATTTTGCAAAGAAGTAAATAGAAAGATTTTACTTATATTATTTTGAAAATTTCAAATTACACCTGATACAATGTAAACATTTAATCTTATGATTATCCTTTTTTCCTACACCCATATATCAAATGTTGAGATATAGAATATACCAATCTTTTTTGAAGGTCAAAATTTTAGTAATTAAGATTACACCAATTGAAGTCAGAAAAGAAAAAAGTAAGAAAATTATTTACATAGGTAATTTAATTATTTATATAAATAAATATGTACTAAGTCTCCGATACATGTATATTTATAAGTGGAAGTTTTCTTTAATTGTTTTTTTGTAGGAACATTTGATAATGAAATATGCAGTTCAATCTAAATTTTGAATATAACAAAACCGTTTATATTTGTGATTTCAATAATATATTACTATTTTTATATGTATATATCTGTAAGTGCCTGAAAAAATTTACTTAAGTATTATTTTTAAATTTATCGATGTTTTTCACATCACATGAAGAGCAAATAATTTTAGTAGTTTTATTTAAAATAAACTACAGTTGACTTTTGTTTAGAATTTTGTCCTCTTCACTTGTCGGACACCACTAATGGTTCTTGGTTATTCTCTTTTGTTATTTTCTAACCTTGTTGTTTCACTGATTCCGGTGATTTTCTTTACTGGGAATTTTAAAGATATTTTCTTTTCTTAACTAAAATTTTCCGTGACAACACATTACAAATGTAGCATTTGGATATGCTCCGAGAACAAACTACGAAGAAAAATGGCAAACTAATATTATGTAGTTTGTTTTAATTGGTGCATCCATTCATTGAGGTGATTTTACTATATAAGTTTGAACACCCTTAATCAAATTCCTAGCTCCACCGTGGAAACCACCTACCGGAAGGTAGTCGAATTCATGTTTACCCATCATTTATGAACAACCCTTACTAGTTGTGGCTTTTTACTCATCTAAGTACCTATCTCTAACTTTTGATACATAGGGGGGATGAGTTAAAATACTTGGGATTAGCCTTTACAGGTATTAGTATGAAGTTGACAAATCAGCGATCATAGACTCTGTTTAAAGAAGACTTCATTGGTTCTTTTTCCAAAAAAGAAAAAAGACTTCATTGGTTATGCTTGGGCAAGACATCTTGTAGTTGCTATATATGAGCTATCAAACCTGAAGGGCTACAGCAGATCCATTACTCAAGTATTGTTCCTGTTCATTCCTATTCACTGGGTTGGGGTTTTGGGGTTGGAAGAGCATCAGCTGGGTCCAGGAAAGCTTTTCCTGTGCGCCAGGTTTCTTATTCATTTTGTTTTGGATCTATGCAATCGTAGGTGGTGTTTTGCATTCAAGATAATGAACCTTGCAGTATGTTGATTTTGAAAATCACTCCCTTCTTTATTATGTGAACAAGGGGTTATTTGCAGAGCCATGCTTTTATGTAGTCCCTTATGTTTCCAGTTTTTAGGATCTATTTTGGCTAGAAACCCTTTCTGTAACACAGTTATGGAGTTCTTCACCAACATAGTCTTGGCAAGAAAGACACAGTGAGAAATCCAAAAACTTATTTGCCCCTTACATATTGCTGAGCCAATAGCTGTTCCAAGCACCCGGATATTTGGCAGTGATGTTCTTTTTGGGAGAACTACTAAAAGAACATTGAATATAAATAGAAACACATTCTTGAATTAGAATAGAATTAGGAAACCAGGAAATTAATATTTACACGGGTCACAATGTTTTTCATATTTTATTTCTTGAAGTGGAAAACTACTTGTAGTTTTGCTTCTATGAATTTTGTTGTTTATGTTTGTGGTGGATATTAACATCATCACACTTCTTTCTCCTTGTCGCAGGTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGT</genome_strand>
        <mrna_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E616238" ref_strand="+" ref_description="SGN-E616238 	[66045]">
      <seq>aatccgatcacatacatatatatacatattatatgcatgtgagtgtgtatatttattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagttgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccatatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccgtatatccacatgaactttttgggtctgtttactttcaccggagnttacctcccatgggttctttaggggttctctgtgcttgttggggccagtgcttggggggatctactgggaatgattgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="91138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94010" g_stop="93737" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="362" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="577" r_length="215" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91441" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="661" r_length="84" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E616238" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94010" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91441"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG</genome_strand>
        <mrna_strand>AATCCGATCACATACATATA--T--ATACATATTATATGCATGTGAGTGTG------TATAT-T-TATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCATATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCGTATATCCACATGAACTTTTTGGGTCTGTTTACTTTCACCGGAGNTTACCTCCCATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E549823" ref_strand="+" ref_description="SGN-E549823 	[TUS-6-B10]">
      <seq>atccgatcacatatatatacatacatacatattatatacacgtgagtgtgtatatatatatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgattaagcggaatggcacaagctgtggaagaatggtacaagcagatgccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccttatgtctcagagtcatttgcaaggatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaaggcaaatccatttatccacatgagctttttgggtctgtttacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94309" stop="91163"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94009" g_stop="93737" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="373" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="588" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91463" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="650" r_length="62" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E549823" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94009" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91463"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTT</genome_strand>
        <mrna_strand>ATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGGCAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E614793" ref_strand="+" ref_description="SGN-E614793 	[64584]">
      <seq>tggctaaataaaatccgatcacatacatatatatacatattatatgcatgtgagtgtgtatatttattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagttgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccatatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgacttttatgatggttcatgtatggagcaagcaaatccgtatatccacatgaggctttatagggatctgtttaactttcaccggaggcttacctccccatggggttcttttaggggttctctgttgcttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94321" stop="91132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94021" g_stop="93737" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.916"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="373" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="588" r_length="215" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91476" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="637" r_length="49" r_score="0.837"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E614793" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94021" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGA-GCTTTTTGG</genome_strand>
        <mrna_strand>TGGCTAAATAAAATCCGATCACATACATAT--AT--ATACATATTATATGCATGTGAGTGTGTATAT-------T-TATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCATATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTCATGTATGGAGCAAGC-AAATCCGTATATCCACATGAGGCTTTATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E569576" ref_strand="+" ref_description="SGN-E569576 	[14033]">
      <seq>aaatccgatcacatacatatatatacttattatatgcatgtgagtgtgtatatatattagaaatcctcgaattgatcaactttcagataacctaaaggctttatcagtcgggttgttaggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctgtgagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaggggtgtggcgcctgggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcagggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccgtatgtctcagagtcatttgcaagatcatattcctgagcaattcattgacttttatgatggtttatgtatggagcaagcaaaatccgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="91197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94011" g_stop="93737" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="0.898"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="366" r_length="103" r_score="0.930"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.87"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="579" r_length="213" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91496" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="608" r_length="29" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E569576" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94011" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTG-GAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCA--GGTGTGGCGCCT-GGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATGTATGGAGCAAGCAAAATCCATT</genome_strand>
        <mrna_strand>AAATCCGATCACATACATAT--AT--ATACTTATTATATGCATGTGAGTGTG----T--ATATATAT-T-AGAAATCCTCGAATTGATCAACTTTCAGATAACCTAAAGGCTTTATCAGTCGGGTTGTTA-GGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGGGTGTGGCGCCTGGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCA-GGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCGTATGTCTCAGAGTCATTTGCAA-GATCATATTCCTGAGCAATTCATTGACTTTTATGATG...............................................................................................GTTTATGTATGGAGCAAGCAAAATCCGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E407492" ref_strand="+" ref_description="SGN-E407492 	[PPI-7-B23]">
      <seq>aataaaatccgatccatacatatatatacatattatatgcatgtgagtgtgtatatttattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagttgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccatatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgacttttattgaggtttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="91314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94015" g_stop="93737" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="366" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91620" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="581" r_length="215" r_score="0.977"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95">
            <donor d_prob="0.981" d_score="0.92"/>
            <acceptor a_prob="0.985" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91524" g_stop="91518" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="588" r_length="7" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E407492" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.022" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407492" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94015" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91620"/>
          <exon e_start="91524" e_stop="91518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATGGTTAGCTCCTCTGCAGTATAACTCCATTTTTGACTCGGCTTTGTTTTATGTCTTAGTCTTTCTTTTTTCATCGTTCTGCTTCCTTCTATGTGTAGGTTTATG</genome_strand>
        <mrna_strand>AATAAAATCCGATC-CATACATATA--T--ATACATATTATATGCATGTGAGTGTG------TATAT-T-TATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCATATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTATTGAG...............................................................................................GTTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E449658" ref_strand="+" ref_description="SGN-E449658 	[cSTS-7-K15]">
      <seq>atacatatatatacatattatatgcatgtgagtgtgtatatttattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagttgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgataccatatgtctcagagtcatttgcaaagatcatattcctgagcaattcattgactttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="91325"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93995" g_stop="93737" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="0.919"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="351" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91625" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="561" r_length="210" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E449658" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93995" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTA</genome_strand>
        <mrna_strand>ATACATATATATACATATTATATGCATGTGAGTGTG----T--ATAT-T-TATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCATATGTCTCAGAGTCATTTGCAAAGATCATATTCCTGAGCAATTCATTGACTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E395909" ref_strand="+" ref_description="SGN-E395909 	[TUS-18-F11]">
      <seq>atccgatcacatatatatacatacatacatattatatacacgtgagtgtgtatatatatatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgattaagcggaatggcacaagctgtggaagaatggtacaagcagatgccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcgggcttctagaagagaactccttcaggggaaggacggcagatttcttctacttgctcttgtttggtgcccctgttttaacaggaaattgttcttgtcgggggggatgataccttatgtctcagagtcatttgccaggatcataattcctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94309" stop="91344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94009" g_stop="93737" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="373" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91643" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="568" r_length="195" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E395909" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94009" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91643"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGG-AATTGTTCTTGTC-GGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCAT-ATTCCTGA</genome_strand>
        <mrna_strand>ATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCGGGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACTTGCTCTTGTTTGGTGCCCCTGTTTTAACAGGAAATTGTTCTTGTCGGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCCAGGATCATAATTCCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E246841" ref_strand="+" ref_description="SGN-E246841 	[cLEF-41-A14]">
      <seq>tccgatcacatatatatacatacatacatattatatacacgtgagtgtgtatatatatatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgattaagcggaatggcacaagctgtggaagaatggtacaagcagatgccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatgatancctatgtctcagagtcatttgcaaggatcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94308" stop="91350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94008" g_stop="93737" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="372" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91650" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="557" r_length="185" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E246841" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94008" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATA</genome_strand>
        <mrna_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATANCCTATGTCTCAGAGTCATTTGCAAGGATCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E582848" ref_strand="+" ref_description="SGN-E582848 	[8481]">
      <seq>aaaatccgatcacatacatatatatacttattatatgcatgtgagtgtgtatatatattagaaatcctgcgaattgatcaactttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacanggaattgttcttgtcgagggggatgataccgtatgtctcaagagtcatttgcaaagatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94312" stop="91352"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94012" g_stop="93737" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.906"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="365" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91652" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="551" r_length="186" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E582848" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94012" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91652"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCT-CGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACA-GGAATTGTTCTTGTCG-GGGGGATGATACCTTATGTCTC-AGAGTCATTTGCAAGGATCA</genome_strand>
        <mrna_strand>AAAATCCGATCACATACATAT--AT--ATACTTATTATATGCATGTGAGTGTG----T--ATATATAT--TAGAAATCCTGCGAATTGATCAACTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACANGGAATTGTTCTTGTCGAGGGGGATGATACCGTATGTCTCAAGAGTCATTTGCAAAGATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E583549" ref_strand="+" ref_description="SGN-E583549 	[9370]">
      <seq>catatatatacatattatatgcatgtgagtgtgtatatttattagaaatcctcggaattgatcaattttcagataacctagaggctttatcagttgggttgttcagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggaccggcagatttcttctaccatgctcttgtttggtagccacctgttttaacaggaaattgttcttgtccgggggggatgataccatatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="91375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93992" g_stop="93737" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="350" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91675" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="517" r_length="167" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E583549" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E583549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93992" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTC-GAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTT-AGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGA-CGGCAGATTTCTTCTA-CATGCTCTTGTTTGGT-GCCA-CTGTTTTAACAGG-AATTGTTCTTGT-C-GGGGGGATGATACCTTATGT</genome_strand>
        <mrna_strand>CATATATATACATATTATATGCATGTGAGTGTG----TATAT-T-TAT-T-AGAAATCCTCGGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTCAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACCGGCAGATTTCTTCTACCATGCTCTTGTTTGGTAGCCACCTGTTTTAACAGGAAATTGTTCTTGTCCGGGGGGGATGATACCATATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E581331" ref_strand="+" ref_description="SGN-E581331 	[6574]">
      <seq>atttcctctagctaaataaaatccgatcacatacatatatatacatattatatgcatgtgagtgtgtatatttattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagttgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaagtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagaagaactccttcaggggaaggacggcaggatttcttctacatgctcttgtaaggtgccactgttttaacaggaattgttcttgtacggggggatgataccatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94329" stop="91377"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94029" g_stop="93737" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="381" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91677" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="542" r_length="161" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E581331" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.017" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E581331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94029" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCCTCTAGCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAG-AGAACTCCTTCAGGGGAAGGACGGCA-GATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGT-CGGGGGGATGATACCTTAT</genome_strand>
        <mrna_strand>ATTTCCTCTAGCTAAATAAAATCCGATCACATACATAT--AT--ATACATATTATATGCATGTGAGTGTG------TATAT-T-TATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAAGAACTCCTTCAGGGGAAGGACGGCAGGATTTCTTCTACATGCTCTTGTAAGGTGCCACTGTTTTAACAGGAATTGTTCTTGTACGGGGGGATGATACCATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E251394" ref_strand="+" ref_description="SGN-E251394 	[cLEG-9-C17]">
      <seq>atccgatcacatatatatacatacatacatattatatacacgtgagtgtgtatatatatatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgattaagcggaatggcacaagctgtggaagaatggtacaagcagatgccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgctggcttctagaagagaactccttcaggggaaggacggcagatttcttctacatgctcttgtttggtgccactgttttaacaggaattgttcttgtcggggggatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94309" stop="91385"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94009" g_stop="93737" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="373" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91685" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="523" r_length="150" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E251394" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94009" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91685"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGA</genome_strand>
        <mrna_strand>ATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCTGGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E405834" ref_strand="+" ref_description="SGN-E405834 	[PPI-1-B24]">
      <seq>cgatcacatacatatatatacatattgtatgcatgtgagtgtgtatatttattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagttgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggatgctctctggagattatatctccttataagttgtacctgaaccccaagttaatggtgaagcaataccaagtgtggcgcctggttacaaattttctttactttcggaagatggactgggactttctgtgacacatgtttttcctagctaggtactgcaagcttctagaagagaactccttcacgggaaggacggcagattgcttatacatgctcttgattggagccactgattcaacaggaattgttcttgataggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94267" stop="91390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93953" g_stop="93737" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="258" r_length="217" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="358" r_length="100" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.853" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91689" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="504" r_length="146" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E405834" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405834" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93953" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGG</genome_strand>
        <mrna_strand>TGTATATTTATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTTGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGATGCTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAATGGTGAAGCAATACCAAGTGTGGCGCCTGGTTACAAATTTTCTTTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGGACTTTCTGTGACACATGTTTTTCCTAGCTAGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCACGGGAAGGACGGCAGATTGCTTATACATGCTCTTGATTGGAGCCACTGATTCAACAGGAATTGTTCTTGATAGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E585902" ref_strand="+" ref_description="SGN-E585902 	[68367]">
      <seq>gatcacatacatatatatacttattatatgcatgtgagtgtgtatatatattagaaatcctcgaattgatcaactttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgatttggctgaatggcacaagctgtggaagaatggtacaagcagatgccgataatcacccgttcctatctcactgctgcaatcgtcaccacaatcggttgttctctggagattatatctccttataagttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagcttctagaagagaactccttcaggggaaggacggcagatttcttctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94263" stop="91440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93951" g_stop="93737" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="257" r_length="215" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="357" r_length="100" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91740" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="452" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E585902" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585902" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93951" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTAC</genome_strand>
        <mrna_strand>TATATATATTAGAAATCCTCGAATTGATCAACTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTTGGCTGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATAATCACCCGTTCCTATCTCACTGCTGCAATCGTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAAGTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E210083" ref_strand="+" ref_description="SGN-E210083 	[cLEC-40-G22]">
      <seq>tccgatcacatatatatacatacatacatattatatacacgtgagtgtgtatatatatatatatattagaaatcctcgaattgatcaattttcagataacctagaggctttatcagtcgggttgttagggatttctgggaagttttgttttggggaaagtttgattaagcggaatggcacaagctgtggaagaatggtacaagcagatgccgattatcacccgttcctacctcactgccgcaatcctcaccacaatcggttgttctctggagattatatctccttataacttgtacctgaaccccaagttagtggtgaagcaataccaggtgtggcgcctggttacaaattttctctactttcggaagatggacttggactttctgtttcacatgtttttcctagctcggtactgcaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="94308" stop="91487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94008" g_stop="93737" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92623" g_stop="92524" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="372" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.853" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91834" g_stop="91787" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="420" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E210083" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210083" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94008" e_stop="93737"/>
          <exon e_start="92623" e_stop="92524"/>
          <exon e_start="91834" e_stop="91787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAGGTATGGATATGATTCATCTTAAGGAAAAACATTAGACTTTCAAGATTGATTTTTTTAAAAAGTTCCCTGCAAAATTAATTCCTGGCACACAACATTATTTTAACTCGAATTTGAGGATTTTTTTTTTTGAGATATCAATGATAAAAATTGAGGGTTGTTTGTATGATGATTGTTTGTTAATTGGGGTTTGTAATTTGGGATGTTGAGATGAACCTTGATTAATGGATACAGGGGTTTCATATAGCTAACCCTAATTAATTTGGGATTGGGGTGTTGTTGATTGATTGTTGTAATTTGGGATGTTGAAATGGACCTGAATTGAGAAGAATGGATTTACATGTTGTATAGCTGGTCCTAACTAGTGTAGGATTGGAACTTGCACACGATGATTGTTTACCGTATCTACGTTAAACACTGTGGGTGCCACGGCACCAGGTGGTTTCGATTGGAACTATGTTTACATACCCGTATATCTATATTTATGTATCAGGATTATTATAAATATAAATCGTGGCACCCAGAGCAATAATGGAGCTCATGGTACCAACGGTCAAAGCTCAGCTTTTCCTCCCTAGGGACGCAAGTTCGAATCAGGCTGAGTTTATTTTATGGAACTATTTTAGCATGCTGGAATCATTGTTAAAAAAATTGTTAAGTTATGGTTTTCTAGATTAGAACGTTTGACCTCTTATAACTAAAATCTTAACTATACCAAGTAGACTAGAGTATATCTTGTACAAAATTACGCTGATGAATAATAATTGTTTGTTTCCTCTATGAATATTGCCACCACTTTTGCAAAATATTTCATACGTTACGCGACAAAGTAGCATGGCACCTGAAGCTTCCAAATCTTATTTTACTCTTTTCCTTAAACCGTTTATAGTAGCTCTACCCAGTATCCTACTTTCTGGTAGGTTTATCATTCAAATTGTTGATTTGTGATATTATGTAACGACAAAGAAAATTGCAGTATATCCAAATGTAATATTCATTAAAACAATACGGTACAATGCAACAGAACATGATACGATACATTATTAAACAATATGTAACAATCATCTACATAAGAATGTTGGTTGACTGATTGATTGTATTTTGTGTGTGTTGCAGATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGGGTAATTTCTCATCTCCCAGCAGTTAGCTTCTTTTTCTGAAAAGATTTTTTCCTCCTTTAGCTTTAGAGTGGATGAGCGTCTTAATGAGGCATAAGTTTAATTGAACAGCCATGAATCTTTTAAGGCTTTAATGACTAGGCTCTTTTGTTCAATAACTATCCTGGCTAAATACAGGGTTCAGCCAGTACTTTGTAGTCTGACTGATTGTTTTGTAGCACTTCTGTTCAATACACTCTTCTCTCATTATGGTTAATGCTTTAGCAACTCTTTCCAATGGTCATTCGTTAATATGTTTGTAGAAGTCAATTTCCTGATATTTACTTCTTTCTGATCTTGGGAAAAGATATCTCACTCACAGCGAGACGAAGTTGGGTACAAAAAAAGTTGAGAGAAGTGGAAAAAACAAGTCACAGAAATAAATTTTGTAGTTCTTAACAGTATGATAGAATAAATCCAAAATGGTAACTGAGCTCATCCTTGCCTCCTATTTACTACAATTTGTGAATTTTGATTTGCTGCTAATCAGCCCTACAACTTTTCCTTTTAATCATATAATTTTATTTGTGAATGCATCTGAAATTATGAGATGAAGGCAGAGTCACTTGTTTGGAGGAATACATCAACATGAGAAGACACTTCCTATTTCTTTTTCTACGTTAGTCTGACATCCTTTTTCTTAATTTTTTCAGACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGC</genome_strand>
        <mrna_strand>TCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E419124" ref_strand="+" ref_description="SGN-E419124 	[STM-29-C3]">
      <seq>ctagaaagaggctcctaggtgcctttatttttcaatacaagtttcattattgaccttttctattcctgcttataatcaacataatgcatggtattccaggggtctcttgctaccgtaacgtctcaaaattgggttaccaggctcttgaacttaaaatactactgcaagcagtagtaaagttgcaaaggtggtggagatgtaaattgcttcatgcacagagaacaaaagccgtagttgtcatccaatcgcatgccttaggatggattgcccggcaacgtgcttcaagaaacaaggaacgattacttcaatcagcattaaagttgcaaaggtggtggagaagtaaattgcttcatgaacagagaacgaaagcagcagttgtcatccaatcacatatcctaggatggttagcccggcaaggtgcttcaagaaataaggaccaattacttcaagcaatattaaagttgcaaaggtggtggagaggtaaattgcttcataaacagagaacaaaagcagcagttgtcatccaatcacatgcccaaggatggaaagcccgacaaagtgcttcaagaaagaagtacctgacactgttagcagtattaaagttgcaaaggtggtggagaggtaaattacttcataaacagagaacanaatcagcagttgtcatccaatcgtatgtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="107686" stop="108961"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107986" g_stop="108661" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="678" r_length="678" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E419124" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107986" e_stop="108661"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGAAAGAGGCTCTTAGGTGCCTTTATTTTTCAATCACAAGTTTCCTTATTGACCTTTTCTATTCCTGCTTATAATCAATATAATGCATGGTATTCCAGGGGCCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGCGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCACAGTTGTCATCCAATCGCATGTTTTAGGATGGATTGCCTGGAAACGTGCTTC---AAACAAGGAACGATTACTTCAAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGTCCGGCAAAGTATTTCAAGAAATAAGGACCAATTACTTCAAGCAACATTGAAGTTGCAAAGGTGGTGGAGAGATAAATTGCTTCATAAACAGAAAACAAAAGCAGCAGTTGTCATCCAATCGCATGTCCAAGGATGGAAAGCTCGACAAAGTGCTTCAAGGAAGAAGCACCTAACGTTGCTAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAGGAAAATTACTTCATAAACAGAGAACAAAATCAGCAGTTGTCATCCAATCGCATGTCC</genome_strand>
        <mrna_strand>CTAGAAAGAGGCTCCTAGGTGCCTTTATTTTTCAAT-ACAAGTTTCATTATTGACCTTTTCTATTCCTGCTTATAATCAACATAATGCATGGTATTCCAGGGGTCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGAGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCGTAGTTGTCATCCAATCGCATGCCTTAGGATGGATTGCCCGGCAACGTGCTTCAAGAAACAAGGAACGATTACTTCAATCAGCATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACGAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGCCCGGCAAGGTGCTTCAAGAAATAAGGACCAATTACTTCAAGCAATATTAAAGTTGCAAAGGTGGTGGAGAGGTAAATTGCTTCATAAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATGCCCAAGGATGGAAAGCCCGACAAAGTGCTTCAAGAAAGAAGTACCTGACACTGTTAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAGGTAAATTACTTCATAAACAGAGAACANAATCAGCAGTTGTCATCCAATCGTATGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E443533" ref_strand="+" ref_description="SGN-E443533 	[cSTA-38-D22]">
      <seq>ctagaaagaggctcctaggtgcctttatttttcaatcacaagtttcattattgaccttttctattcctgcttataatcaacataatgcatggtattccaggggtctcttgctaccgtaacgtctcaaaattgggttaccaggctcttgaacttaaaatactactgcaagcagtagtaaagttgcaaaggtggtggagatgtaaattgcttcatgcacagagaacaaaagccgtagttgtcatccaatcgcatgccttaggatggattgcccggcaacgtgcttcaagaaacaaggaacgattacttcaatcagcattaaagttgcaaaggtggtggagaagtaaattgcttcatgaacagagaacgaaagcagcagttgtcatccaatcacatatcctaggatggttagcccggcaaggtgcttcaagaaataaggaccaattacttcaagcaatattaaagttgcaaaggtggtggagaggtaaattgcttcataaacagagaacaaaagcagcagttgtcatccaatcacatgcccaaggatggaaagcccgacaaagtgcttcaagaaagaagtacctgacactgttagcagtattaaagttgcaaaggtggtggagaggtaaattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="107686" stop="108914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107986" g_stop="108614" g_length="629"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E443533" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E443533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107986" e_stop="108614"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGAAAGAGGCTCTTAGGTGCCTTTATTTTTCAATCACAAGTTTCCTTATTGACCTTTTCTATTCCTGCTTATAATCAATATAATGCATGGTATTCCAGGGGCCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGCGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCACAGTTGTCATCCAATCGCATGTTTTAGGATGGATTGCCTGGAAACGTGCTTC---AAACAAGGAACGATTACTTCAAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGTCCGGCAAAGTATTTCAAGAAATAAGGACCAATTACTTCAAGCAACATTGAAGTTGCAAAGGTGGTGGAGAGATAAATTGCTTCATAAACAGAAAACAAAAGCAGCAGTTGTCATCCAATCGCATGTCCAAGGATGGAAAGCTCGACAAAGTGCTTCAAGGAAGAAGCACCTAACGTTGCTAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAGGAAAATTACT</genome_strand>
        <mrna_strand>CTAGAAAGAGGCTCCTAGGTGCCTTTATTTTTCAATCACAAGTTTCATTATTGACCTTTTCTATTCCTGCTTATAATCAACATAATGCATGGTATTCCAGGGGTCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGAGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCGTAGTTGTCATCCAATCGCATGCCTTAGGATGGATTGCCCGGCAACGTGCTTCAAGAAACAAGGAACGATTACTTCAATCAGCATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACGAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGCCCGGCAAGGTGCTTCAAGAAATAAGGACCAATTACTTCAAGCAATATTAAAGTTGCAAAGGTGGTGGAGAGGTAAATTGCTTCATAAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATGCCCAAGGATGGAAAGCCCGACAAAGTGCTTCAAGAAAGAAGTACCTGACACTGTTAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAGGTAAATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E419141" ref_strand="+" ref_description="SGN-E419141 	[STM-29-E13]">
      <seq>ctagaaagaggctcctaggtgcctttatttttcaatcacaagtttcattattgaccttttctattcctgcttataatcaacataatgcatggtattccaggggtctcttgctaccgtaacgtctcaaaattgggttaccaggctcttgaacttaaaatactactgcaagcagtagtaaagttgcaaaggtggtggagatgtaaattgcttcatgcacagagaacaaaagccgtagttgtcatccaatcgcatgccttaggatggattgcccggcaacgtgcttcaagaaacaaggaacgattacttcaatcagcattaaagttgcaaaggtggtggagaagtaaattgcttcatgaacagagaacgaaagcagcagttgtcatccaatcacatatcctaggatggttagcccggcaaggtgcttcaagaaataaggaccaattacttcaagcaatattaaagttgcaaaggtggtggagaggtaaattgcttcataaacagagaacaaaagcagcagttgtcatccaatcacatgcccaaggatggaaagcccgacaaagtgcttcaagaaagaaagacctgacactgttagcagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="107686" stop="108878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107986" g_stop="108578" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E419141" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107986" e_stop="108578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGAAAGAGGCTCTTAGGTGCCTTTATTTTTCAATCACAAGTTTCCTTATTGACCTTTTCTATTCCTGCTTATAATCAATATAATGCATGGTATTCCAGGGGCCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGCGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCACAGTTGTCATCCAATCGCATGTTTTAGGATGGATTGCCTGGAAACGTGCTTC---AAACAAGGAACGATTACTTCAAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGTCCGGCAAAGTATTTCAAGAAATAAGGACCAATTACTTCAAGCAACATTGAAGTTGCAAAGGTGGTGGAGAGATAAATTGCTTCATAAACAGAAAACAAAAGCAGCAGTTGTCATCCAATCGCATGTCCAAGGATGGAAAGCTCGACAAAGTGCTTCAAGGAAGAAGCACCTAACGTTGCTAGCAGT</genome_strand>
        <mrna_strand>CTAGAAAGAGGCTCCTAGGTGCCTTTATTTTTCAATCACAAGTTTCATTATTGACCTTTTCTATTCCTGCTTATAATCAACATAATGCATGGTATTCCAGGGGTCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGAGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCGTAGTTGTCATCCAATCGCATGCCTTAGGATGGATTGCCCGGCAACGTGCTTCAAGAAACAAGGAACGATTACTTCAATCAGCATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACGAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGCCCGGCAAGGTGCTTCAAGAAATAAGGACCAATTACTTCAAGCAATATTAAAGTTGCAAAGGTGGTGGAGAGGTAAATTGCTTCATAAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATGCCCAAGGATGGAAAGCCCGACAAAGTGCTTCAAGAAAGAAAGACCTGACACTGTTAGCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E443494" ref_strand="+" ref_description="SGN-E443494 	[cSTA-38-K13]">
      <seq>ctagaaagaggctcctaggtgcctttatttttcaatcacaagtttcattattgaccttttctattcctgcttataatcaacataatgcatggtattccaggggtctcttgctaccgtaacgtctcaaaattgggttaccaggctcttgaacttaaaatactactgcaagcagtagtaaagttgcaaaggtggtggagatgtaaattgcttcatgcacagagaacaaaagccgtagttgtcatccaatcgcatgccttaagatggattgcccggcaacgtgcttcaagaaacaaggaacgattacttcaatcagcattaaagttgcaaaagtggtggagaagtaaattgcttcatgaacagagaacgaaagcagcagttgtcatccaatcacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="107686" stop="108676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107986" g_stop="108376" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E443494" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E443494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107986" e_stop="108376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGAAAGAGGCTCTTAGGTGCCTTTATTTTTCAATCACAAGTTTCCTTATTGACCTTTTCTATTCCTGCTTATAATCAATATAATGCATGGTATTCCAGGGGCCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGCGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCACAGTTGTCATCCAATCGCATGTTTTAGGATGGATTGCCTGGAAACGTGCTTC---AAACAAGGAACGATTACTTCAAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATA</genome_strand>
        <mrna_strand>CTAGAAAGAGGCTCCTAGGTGCCTTTATTTTTCAATCACAAGTTTCATTATTGACCTTTTCTATTCCTGCTTATAATCAACATAATGCATGGTATTCCAGGGGTCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGAGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCGTAGTTGTCATCCAATCGCATGCCTTAAGATGGATTGCCCGGCAACGTGCTTCAAGAAACAAGGAACGATTACTTCAATCAGCATTAAAGTTGCAAAAGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACGAAAGCAGCAGTTGTCATCCAATCACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E304768" ref_strand="+" ref_description="SGN-E304768 	[cLEX-11-N24]">
      <seq>tgaacttaaaatactactgcaagcagtagtaaagttgcaaaggtggtggcgatgtaaattgcttcatgcacagagaacaaaagccacagttgtcatccaatcgcatgttttaggatggattgcctggaaacgtgcttcaaacaaggaacgattacttcaagcagtattaaagttgcaaaggtggtggagaagtaaattgcttcatgaacagagaacaaaagcagcagttgtcatccaatcacatatcctaggatggttagtccggcaaagtatttcaagaaataaggaccaattacttcaagcaacattgaagttgcaaaggtggtggagagataaattgcttcataaacagaaaacaaaagcagcagttgtcatccaatcgcatgtccaaggatggaaagctcgacaaagtgcttcaaggaagaagcacctaacgttgctagcagtattaaagttgcaaaggtggtggagaggaaaattacttcataaacagagaacaaaatcagcagttgtcatccaatcgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="107832" stop="108958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108132" g_stop="108658" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="527" r_length="527" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E304768" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E304768" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108132" e_stop="108658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGCGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCACAGTTGTCATCCAATCGCATGTTTTAGGATGGATTGCCTGGAAACGTGCTTCAAACAAGGAACGATTACTTCAAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGTCCGGCAAAGTATTTCAAGAAATAAGGACCAATTACTTCAAGCAACATTGAAGTTGCAAAGGTGGTGGAGAGATAAATTGCTTCATAAACAGAAAACAAAAGCAGCAGTTGTCATCCAATCGCATGTCCAAGGATGGAAAGCTCGACAAAGTGCTTCAAGGAAGAAGCACCTAACGTTGCTAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAGGAAAATTACTTCATAAACAGAGAACAAAATCAGCAGTTGTCATCCAATCGCATG</genome_strand>
        <mrna_strand>TGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGCGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCACAGTTGTCATCCAATCGCATGTTTTAGGATGGATTGCCTGGAAACGTGCTTCAAACAAGGAACGATTACTTCAAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGTCCGGCAAAGTATTTCAAGAAATAAGGACCAATTACTTCAAGCAACATTGAAGTTGCAAAGGTGGTGGAGAGATAAATTGCTTCATAAACAGAAAACAAAAGCAGCAGTTGTCATCCAATCGCATGTCCAAGGATGGAAAGCTCGACAAAGTGCTTCAAGGAAGAAGCACCTAACGTTGCTAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAGGAAAATTACTTCATAAACAGAGAACAAAATCAGCAGTTGTCATCCAATCGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E432681" ref_strand="+" ref_description="SGN-E432681 	[STM-57-K22]">
      <seq>gcaaccaaccacgtctcttgcagccaccattttttcctacctaaatcctcttctttcttccaacttccaagaaaatggaattctcaactttccatccctcaacatggaattcttttttcacctctcctctcctttttccctatcagttcattcctgagaattatgttcactggagagagacccctgaatctcacatatactctgctgatcttccaggtgtgaagaaagaggaaataaaggtggaagttgaggattcaagctatctgataataagaactgaagcagccaatgaaacaacagagccaataaggagctttatgaggaaatttaggctacctggaatggtggatatggatggaatttctgctagttatagagatggtgttttgacagtcacagttccaagaacacttgtgagaaggggatttttcattgaaccagatgacttgccagaaagcatagtgaatcttggtgctagtgctgcttgattattttgcttccaaacaagatttggttgatattaatacctaatcttattattagtagtagtagtattgggtttagggagggggatttcaagattgtgctatcttggagattgtgtacataagttagatcaatggtaatccttaaactgaatttgctgtcattccaaaaacttttgagcttgaaaaatactatatttgtaacaaaaggatggagtgaagtctatttacccctgcttttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="112402" stop="45096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112048" g_stop="111896" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="216" r_length="153" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111895" i_stop="111782" i_length="114">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111781" g_stop="111275" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="729" r_length="513" r_score="0.913"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111274" i_stop="110577" i_length="698">
            <donor d_prob="0.998" d_score="0.72"/>
            <acceptor a_prob="0.097" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110576" g_stop="110565" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="730" r_stop="741" r_length="12" r_score="0.583"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E432681" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E432681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112048" e_stop="111896"/>
          <exon e_start="111781" e_stop="111275"/>
          <exon e_start="110576" e_stop="110565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCAAGAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAGGTAAACACACACACACATAAAAAAGAACAGTTGAAGTGACTCTTTTTTGGACACCCTTTTTTTTTTGTATTGGGTATTAATTTTCTTGAAGTTTGGATGTTTTTGTTTTGACAGGTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTA-T--TA-T--T--T-TTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAGTGGTAATCCTTAAACTGAATTTGCTGTTATTTCAAAAACTATTGAGCTTGAAAAATACTATATTTGTCACAAAAGAATGGAGAGCAGTCTATTTCCAAGGGTGTGTTTGATGCTAGAAAATAAATATTTGGTAAAACTATTAGCTTAAACATTAATATAGTACAATTTAACAAAATATTATGAGGGTGAAAAAATGAGGGGTTTGTGGGGCATAGAGTAGGTGTAGAGAAGATAATGAATTTGAAGGTGACTTGTTCTTCTTCATTTATTAAATTATCTTTTCTCATGTTTATTTAAACAAATTAAACATGATTTTTAAAAAAATATTTTCCTCTTTGCCAAACAATTCCCAAAGCTTTCCAGGGAAGATCTGGGCCGATACCATTGGAAGTTGAATTTGTTTAATTAAGAAGAAATTCATTGGAAGCTTCAAAAAATATCTTCATCTTTAACGAGGGAGCATGGAAGAGGATAATATGGATTTTAAACTGTTGAGTCTTTAAAAAAATGTGGCCAAATTATTACTCAAGGCATCCCTGCAATTCACAAATCCCCATCTAAAGAGGTACTCCTAAAACAAATAAGTTTTTTTTGTTTAAATAAATGAATGGAAGAGTGGAAAAAGAGGGTAGAATTATTTAACCTAAAATTCAATAAACAAGTTTTGGGCTAAACAAGAACTTAACAGTAGGTGGGTGGTGATATTTTTTTGGCTACATAATCTAAATAAAGCTGGGGACGGCAGCCACAAGGTTCACATCTACTTTAACCAACTTTTAGTTTAATGAACTGGAACTTGACCTTGCCAGATGATTTAAAAA</genome_strand>
        <mrna_strand>CTTCCAAGAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTTTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAG..................................................................................................................GTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTATCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGCCAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTA-TTTTGCTTCCAAACAAGATTTGGTTGATATTAATACCTAATCTTATTATTAGTAGTAGTAGTATTGGGTTTAGGGAGGGGGATTTCAAGATTGTGCTATCTTGGAGATTGTGTACATAAGTTAGATCAATGGTAATCCTTAAACTGAATTTGCTGTCATTCCAAAAACTTTTGAGCTTGAAAAATACTATATTTGTAACAAAAGGATGGAGTGAAGTCTATTT--ACCCCTGCTTTTAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E393110" ref_strand="+" ref_description="SGN-E393110 	[TUS-38-D1]">
      <seq>gaaaatggaattctcaactttccatccctcaacatggaattcttttttcacctctcctctcctctttccctatcagttcattcctgagaattatgttcactggagagagacccctgaatctcacatatactctgctgatcttccaggtgtgaagaaagaggaaataaaggtggaagttgaggattcaagctacctgataataagaactgaagcagccaatgaaacaacagagccaataaggagctttatgaggaaatttaggctacctggaatggtggatatggatggaatttctgctagttatagagatggtgttttgacagtcacagttccaagaacacttgtgagaaggggatttttcattgaaccagatgacttgacagaaagcatagtgaatcttggtgctagtgctgcttgattatttttgcttccaaacaagatttggttgatattgatacctaatcttattattatttttgggtttagggagagggatttcaagattgtgctctctttgagattatgtacataagttagatcagtggtaatccttaaactgaatttgctgttatttccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="112341" stop="111048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112041" g_stop="111896" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111895" i_stop="111782" i_length="114">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111781" g_stop="111341" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="587" r_length="441" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E393110" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393110" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112041" e_stop="111896"/>
          <exon e_start="111781" e_stop="111341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAGGTAAACACACACACACATAAAAAAGAACAGTTGAAGTGACTCTTTTTTGGACACCCTTTTTTTTTTGTATTGGGTATTAATTTTCTTGAAGTTTGGATGTTTTTGTTTTGACAGGTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAGTGGTAATCCTTAAACTGAATTTGCTGTTATTTCAAAAACTATTGA</genome_strand>
        <mrna_strand>GAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAG..................................................................................................................GTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAGTGGTAATCCTTAAACTGAATTTGCTGTTATTTCCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E393111" ref_strand="+" ref_description="SGN-E393111 	[TUS-38-D3]">
      <seq>gaaaatggaattctcaactttccatccctcaacatggaattcttttttcacctctcctctcctctttccctatcagttcattcctgagaattatgttcactggagagagacccctgaatctcacatatactctgctgatcttccaggtgtgaagaaagaggaaataaaggtggaagttgaggattcaagctacctgataataagaactgaagcagccaatgaaacaacagagccaataaggagctttatgaggaaatttaggctacctggaatggtggatatggatggaatttctgctagttatagagatggtgttttgacagtcacagttccaagaacacttgtgagaaggggatttttcattgaaccagatgacttgacagaaagcatagtgaatcttggtgctagtgctgcttgattatttttgcttccaaacaagatttggttgatattgatacctaatcttattattatttttgggtttagggagagggatttcaagattgtgctctctttgagattatgtacataagttagatcattggtaatccttaaactgaatttgctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="112341" stop="111059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112041" g_stop="111896" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111895" i_stop="111782" i_length="114">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111781" g_stop="111359" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="569" r_length="423" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E393111" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112041" e_stop="111896"/>
          <exon e_start="111781" e_stop="111359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAGGTAAACACACACACACATAAAAAAGAACAGTTGAAGTGACTCTTTTTTGGACACCCTTTTTTTTTTGTATTGGGTATTAATTTTCTTGAAGTTTGGATGTTTTTGTTTTGACAGGTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAGTGGTAATCCTTAAACTGAATTTGCTGT</genome_strand>
        <mrna_strand>GAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAG..................................................................................................................GTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCATTGGTAATCCTTAAACTGAATTTGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E374425" ref_strand="+" ref_description="SGN-E374425 	[TUS-38-D2]">
      <seq>aaaatggaattctcaactttccatccctcaacatggaattcttttttcacctctcctctcctctttccctatcagttcattcctgagaattatgttcactggagagagacccctgaatctcacatatactctgctgatcttccaggtgtgaagaaagaggaaataaaggtggaagttgaggattcaagctacctgataataagaactgaagcagccaatgaaacaacagagccaataaggagctttatgaggaaatttaggctacctggaatggtggatatggatggaatttctgctagttatagagatggtgttttgacagtcacagttccaagaacacttgtgagaaggggatttttcattgaaccagatgacttgacagaaagcatagtgaatcttggtgctagtgctgcttgattatttttgcttccaaacaagatttggttgatattgatacctaatcttattattatttttgggtttagggagagggatttcaagattgtgctctctttgagattatgtacataaagttagatcagtggtaatccttcaactgaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="112340" stop="111063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112040" g_stop="111896" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="145" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111895" i_stop="111782" i_length="114">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111781" g_stop="111363" g_length="419"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="565" r_length="420" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E374425" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112040" e_stop="111896"/>
          <exon e_start="111781" e_stop="111363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAGGTAAACACACACACACATAAAAAAGAACAGTTGAAGTGACTCTTTTTTGGACACCCTTTTTTTTTTGTATTGGGTATTAATTTTCTTGAAGTTTGGATGTTTTTGTTTTGACAGGTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACAT-AAGTTAGATCAGTGGTAATCCTTAAACTGAATTTG</genome_strand>
        <mrna_strand>AAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAG..................................................................................................................GTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAAGTTAGATCAGTGGTAATCCTTCAACTGAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E205242" ref_strand="+" ref_description="SGN-E205242 	[cLEC-25-D1]">
      <seq>aaacacctccctagcagccatcattttttcctcctaaatcctcttctttcttccaagaaaatggaattctcaactttccatccctcaacatggaattcttttttcacctctcctctcctctttccctatcagttcattcctgagaattatgttcactggagagagacccctgaatctcacatatactctgctgatcttccaggtgtgaagaaagaggaaataaaggtggaagttgaggattcaagctacctgataataagaactgaagcagccaatgaaacaacagagccaataaggagctttatgaggaaatttaggctacctggaatggtggatatggatggaatttctgctagttatagagatggtgttttgacagtcacagttccaagaacacttgtgagaaggggatttttcattgaaccagatgacttgacagaaagcatagtgaatcttggtgctagtgctgcttgattatttttgcttccaaacaagatttggttgatattgatacctaatcttattattatttttgggtttagggagagggatttcaagattgtgctctctttgagattatgtacataagttagatcagtggtaatccttaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="112397" stop="111069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112097" g_stop="111896" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="202" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111895" i_stop="111782" i_length="114">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111781" g_stop="111369" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="615" r_length="413" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E205242" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112097" e_stop="111896"/>
          <exon e_start="111781" e_stop="111369"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACCTCCCTAGCAGCCATCATTTTTTCCTCCTAAATCCTCTTCTTTCTTCCAAGAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAGGTAAACACACACACACATAAAAAAGAACAGTTGAAGTGACTCTTTTTTGGACACCCTTTTTTTTTTGTATTGGGTATTAATTTTCTTGAAGTTTGGATGTTTTTGTTTTGACAGGTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAGTGGTAATCCTTAAACTG</genome_strand>
        <mrna_strand>AAACACCTCCCTAGCAGCCATCATTTTTTCCTCCTAAATCCTCTTCTTTCTTCCAAGAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAG..................................................................................................................GTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAGTGGTAATCCTTAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E614684" ref_strand="+" ref_description="SGN-E614684 	[64474]">
      <seq>ctctcttgcagccaccattttttcctcctaaatcctcttcttctttccaagaaaatgggaattctcaactttccatccctcaacatggaattcttttttcacctctcctctcctttttccctatcagttcattcctgagaattatgttcactggagagagacccctgaatctcacatatactctgctgatcttccaggtgtgaagaaagaggaaataaaggtggaagttgaggattcaagctatctgataataagaactgaagcagccaatgaaacaacagagccaataaggagctttatgaggaaatttaggctacctggaatggtggatatggatggaatttctgctagttatagagatggtgttttgacagtcacagttccaagaacacttgtgagaagggggatttttcattgaaccagatgacttgccagagagcatagtgaatcttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="112391" stop="111225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112091" g_stop="111896" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111895" i_stop="111782" i_length="114">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111781" g_stop="111525" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="455" r_length="258" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E614684" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E614684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112091" e_stop="111896"/>
          <exon e_start="111781" e_stop="111525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTAGCAGCCATCATTTTTTCCTCCTAAATCCTCTTCTTTCTTCCAAGAAAAT-GGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAGGTAAACACACACACACATAAAAAAGAACAGTTGAAGTGACTCTTTTTTGGACACCCTTTTTTTTTTGTATTGGGTATTAATTTTCTTGAAGTTTGGATGTTTTTGTTTTGACAGGTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAA-GGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGT</genome_strand>
        <mrna_strand>CTCTCTTGCAGCCACCATTTTTTCCTCCTAAATCCTCTTCTTCTTTCCAAGAAAATGGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTTTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAG..................................................................................................................GTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTATCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGGATTTTTCATTGAACCAGATGACTTGCCAGAGAGCATAGTGAATCTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E582046" ref_strand="+" ref_description="SGN-E582046 	[7679]">
      <seq>catccttctagggttccatcgttccccctctctgaaccccatctttatcacgatgcagccagcgaattccatggttccaccaccacagtaccagcagacacagcagtggatggctcagcagccgccgcagtatcaggttgcgcctccgcagcaatcgggatattattaccagcaacctccgcaacagggcggagttcctccaccccaacaacaacaacctcagtacaacgcctctggtttggctgctactaccggttctgtcctgccgactagtgctgatgagatccgaagcctttggatcggagatctacagttttggatggatgaacaatacattctcaactgtttcgcacaaactggagaggtgacctctgctaaagttatccgtaacaagcaaagtggacagtcagagggttatggctttattgagtttattagtcatgctgctgcagaaaggaatctgcaagcatataatgggaccttgatgcctaatattgagcaaaatttcagactcaactgggcttcactcggttccggtgaaaaacgttctgataatggtcctgaacatacaatatttgttggcgacttggcagctgatgtttctgattatatgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="115482" stop="118235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115757" g_stop="116121" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116122" i_stop="117682" i_length="1561">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117683" g_stop="117935" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="617" r_length="253" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E582046" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E582046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115757" e_stop="116121"/>
          <exon e_start="117683" e_stop="117935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCTTATAGGGTTCCACCGTTCCCCCCCTCTCTGAACCCCAT-TTCATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGCAACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAAACTGGAGAGGTTTGTTTATATAAACGCCTCTTTTTTTTCTTGAACAATTTGATATAGATTCTTGGTAAGTTTTCGAATGGTTCTTGTTCTTGAATGAGTTTGAAAAATTTATTGGGGTACAAAACGATAAGTTCTTTCGTATTGAATGTTTATTTGAGTAATGTTAATTTGATAGTCTCTCTACATATAGTGAATATGATGTAGTTTCATAGCAAAAAAACTTTCGGTTACATTCTTGGTTAAATGTATGTGAATAAACTGTTATTTGTATTCAGTGACTTGTCTTTCATGGTTGGTGAAAGGTATGAGGGTATGCTGTCGTTTGTATTCAGTGGCTAGTATTAACTTTGTTGGCTAGTATTAACTTTGTTTATATGTAAGCTTAGTGTGTCAATATGCTGTTGTTTGTATTCAGTAACTTGTGTTATGTTGGTGAAAGATATGTGAATATGCTGTAGTTTGTATCAGAAACTTTCTTTACCTTGGTGGTAAAACCAGTGTGTGAAAGGCGATTCATTGCCTGAGGTGATCTCCAAAAGGCGACGCCATGGAGACAAAAGGCAAGAGGCAAGAAAGGCGGGAAAGGTGTCACCTTTTGTATTATCTTTAAAAAATGCAACCAATTTAGGTTTTTAAAAGTTAAAAGGTACTTTTTGGGTTTTCGACCCTACTCCTCCCACGACCAGCCAGACTTTTTCAGCTACTTCAAAGTCCAACCAATACATATTTCTTCTTCCGATTTTCTTCCTCTATTTTTTTATCGTCTTCTTCATACTTTAGAGTCACTTCTATCTCTATTTGACTTTTGTTCTGTTTTTTTCTCATTCAAGTTTTACACTTTTAGTATGTACCATGTATTTTCAGTTTTTGAATTGAAACATTTGCTAATATGTTATTGCTATTGAGAATCTGATTATTTACATATGCAATTAATATTTTAACTTTTTGGTATTAATTGATATCACATTAAAAAAAGGCAGACCCTTGTCGCCTTTTATCGCCTTTCGCCGTCCAAAACACGGGGTAAAACATAAAAGTATGCATCATGCAAATGCAGAAGTTTGTATTCATGAACTTGTATTACCTCTTCGTTGAAGGGATGTGAGTATGCTGTAATTTCTCTTTTGCAACCTGTATTGTGTTACGGTTTATCCTGAACATTTTGAGATTAACCATAAACAAGGCAACCTTGCTGGTTCATTCTTTTATTGACTTTGGGTATTGACACTAGGAAGGGTTTTGGTGAATGCTTTTGCCAATTGTTACATTATTTGAGATAGTGAAAGAAGGGAGCTAATAATCCTTACACAACCTTATTAAATTAATGAATAACTCCGTGCCTAAATCTGTGTGTAAACTTGTTCATACTAAATGATTGCGTGGTGGTTGCCTTTAGGTGCATCTTGACGAAATATACCAAAAAACATTCACTTGCCCCCTCCCCCTCCCCTCTCTAATTTAACTTTCTTGTCTTTTGTACTGTATGAGCAGCATTGTTACTACTATTGACAGTCTTTTTTCTCTTTCACTTGCCCTTTTTAGAGATATAAACTGTTTGTCTATTATATAGGTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAATCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGTACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCTGGTGAAAAACGTTCTGATAATGGTCCTGAATATACAATATTTGTTGGTGACTTGGCAGCCGATGTTTCTGATTATATGCTTC</genome_strand>
        <mrna_strand>CATCCTTCTAGGGTTCCATCGTT--CCCCCTCTCTGAACCCCATCTTTATCACGATGCAGCCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCAGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTATTACCAGCAACCTCCGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACCTCAGTACAACGCCTCTGGTTTGGCTGCTACTACCGGTTCTGTCCTGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAACAATACATTCTCAACTGTTTCGCACAAACTGGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAGTCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGGACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCCGGTGAAAAACGTTCTGATAATGGTCCTGAACATACAATATTTGTTGGCGACTTGGCAGCTGATGTTTCTGATTATATGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E583386" ref_strand="+" ref_description="SGN-E583386 	[9207]">
      <seq>catccttctagggttccatcgttccccctctctgaaccccatctttatcacgatgcagccagcgaattccatggttccaccaccacagtaccagcagacacagcagtggatggcttcaagcagccgccgcagtatcaggttgcgcctccgcagcaatcgggatattattaccagcaaacctccgcaacagggcggagttcctccaccccaacaacaacaacctcagtacaacgcctctggtttggctgctactaccggttctgtcctgccgactagtgctgatgagatcccgaagccttttggatcggagatctacagtttttggatggatgaacaatacattctcaactgtttcgcacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="115482" stop="116412"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115757" g_stop="116112" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="361" r_length="361" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E583386" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E583386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115757" e_stop="116112"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTCTTATAGGGTTCCACCGTTCCCCCCCTCTCTGAACCCCAT-TTCATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGC-TC-AGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGC-AACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGAT-CCGAAGCC-TTTGGATCGGAGATCTACAG-TTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAA</genome_strand>
        <mrna_strand>CATCCTTCTAGGGTTCCATCGTT--CCCCCTCTCTGAACCCCATCTTTATCACGATGCAGCCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTTCAAGCAGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTATTACCAGCAAACCTCCGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACCTCAGTACAACGCCTCTGGTTTGGCTGCTACTACCGGTTCTGTCCTGCCGACTAGTGCTGATGAGATCCCGAAGCCTTTTGGATCGGAGATCTACAGTTTTTGGATGGATGAACAATACATTCTCAACTGTTTCGCACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E422947" ref_strand="+" ref_description="SGN-E422947 	[STM-41-C14]">
      <seq>gttccatcgttccccctctctgaaccccatcttcatcacgatgcagccagcgaattccatggttccaccaccacagtaccagcagacacagcagtggatggctcagcagccgccgcagtatcatgttgcgcctccgcagcaatcgggatattattaccagcaacctccgcaacagggcggagttcctccaccccaacaacaacaacctcagtacaacgcctctggtttggctgctactaacggttctgtccagccgactagtgctgatgagatccgaagcctttggatcggagatctacagttttggatggatgaacaatacattctcaactgtttcgcacaaactggagaggtgacctctgctaaagttatccgtaacaagcaaagtggacagtcagagggttatggctttattgagtttattagtcatgctgctgcagaaaggaatctgcaagcatataatgggaccttgatgcctaatattgagcaaaatttcagactcaactgggcttcactcggttccggtgaaaacgttctgataatgggcctggacatacaatatttggtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="115482" stop="118200"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115769" g_stop="116121" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116122" i_stop="117682" i_length="1561">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117683" g_stop="117900" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="569" r_length="217" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E422947" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E422947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115769" e_stop="116121"/>
          <exon e_start="117683" e_stop="117900"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCCACCGTTCCCCCCCTCTCTGAACCCCAT-TTCATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGCAACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAAACTGGAGAGGTTTGTTTATATAAACGCCTCTTTTTTTTCTTGAACAATTTGATATAGATTCTTGGTAAGTTTTCGAATGGTTCTTGTTCTTGAATGAGTTTGAAAAATTTATTGGGGTACAAAACGATAAGTTCTTTCGTATTGAATGTTTATTTGAGTAATGTTAATTTGATAGTCTCTCTACATATAGTGAATATGATGTAGTTTCATAGCAAAAAAACTTTCGGTTACATTCTTGGTTAAATGTATGTGAATAAACTGTTATTTGTATTCAGTGACTTGTCTTTCATGGTTGGTGAAAGGTATGAGGGTATGCTGTCGTTTGTATTCAGTGGCTAGTATTAACTTTGTTGGCTAGTATTAACTTTGTTTATATGTAAGCTTAGTGTGTCAATATGCTGTTGTTTGTATTCAGTAACTTGTGTTATGTTGGTGAAAGATATGTGAATATGCTGTAGTTTGTATCAGAAACTTTCTTTACCTTGGTGGTAAAACCAGTGTGTGAAAGGCGATTCATTGCCTGAGGTGATCTCCAAAAGGCGACGCCATGGAGACAAAAGGCAAGAGGCAAGAAAGGCGGGAAAGGTGTCACCTTTTGTATTATCTTTAAAAAATGCAACCAATTTAGGTTTTTAAAAGTTAAAAGGTACTTTTTGGGTTTTCGACCCTACTCCTCCCACGACCAGCCAGACTTTTTCAGCTACTTCAAAGTCCAACCAATACATATTTCTTCTTCCGATTTTCTTCCTCTATTTTTTTATCGTCTTCTTCATACTTTAGAGTCACTTCTATCTCTATTTGACTTTTGTTCTGTTTTTTTCTCATTCAAGTTTTACACTTTTAGTATGTACCATGTATTTTCAGTTTTTGAATTGAAACATTTGCTAATATGTTATTGCTATTGAGAATCTGATTATTTACATATGCAATTAATATTTTAACTTTTTGGTATTAATTGATATCACATTAAAAAAAGGCAGACCCTTGTCGCCTTTTATCGCCTTTCGCCGTCCAAAACACGGGGTAAAACATAAAAGTATGCATCATGCAAATGCAGAAGTTTGTATTCATGAACTTGTATTACCTCTTCGTTGAAGGGATGTGAGTATGCTGTAATTTCTCTTTTGCAACCTGTATTGTGTTACGGTTTATCCTGAACATTTTGAGATTAACCATAAACAAGGCAACCTTGCTGGTTCATTCTTTTATTGACTTTGGGTATTGACACTAGGAAGGGTTTTGGTGAATGCTTTTGCCAATTGTTACATTATTTGAGATAGTGAAAGAAGGGAGCTAATAATCCTTACACAACCTTATTAAATTAATGAATAACTCCGTGCCTAAATCTGTGTGTAAACTTGTTCATACTAAATGATTGCGTGGTGGTTGCCTTTAGGTGCATCTTGACGAAATATACCAAAAAACATTCACTTGCCCCCTCCCCCTCCCCTCTCTAATTTAACTTTCTTGTCTTTTGTACTGTATGAGCAGCATTGTTACTACTATTGACAGTCTTTTTTCTCTTTCACTTGCCCTTTTTAGAGATATAAACTGTTTGTCTATTATATAGGTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAATCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGTACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCTGGTGAAAAACGTTCTGATAATGGTCCTGAATATACAATATTTGTTGG</genome_strand>
        <mrna_strand>GTTCCATCGTT-C-CCCCTCTCTGAACCCCATCTTCATCACGATGCAGCCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCAGCCGCCGCAGTATCATGTTGCGCCTCCGCAGCAATCGGGATATTATTACCAGCAACCTCCGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACCTCAGTACAACGCCTCTGGTTTGGCTGCTACTAACGGTTCTGTCCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAACAATACATTCTCAACTGTTTCGCACAAACTGGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAGTCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGGACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCCGGTG-AAAACGTTCTGATAATGGGCCTGGACATACAATATTTGGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E329974" ref_strand="+" ref_description="SGN-E329974 	[cTOD-5-H15]">
      <seq>caccgttccccccctctctgaaccccatttgatcacgatgcaaccagcgaattccatggttccaccaccacagtaccagcagacacagcagtggatggctcagccgccgccgcagtatcaggttgcgcctccgcagcaatcgggatattactaccagcaacctcagcaacagggcggagttcctccaccccaacaacaacaacttcagtacaacgcctctggtttggctgctactgccggttctgttcagccgactagtgctgatgagatccgaagcctttggatcggagatctacagttttggatggatgagcaataccttctcaactgtttcgcacaaactggagaggtgacctctgctaaagttatccgtaacaagcaaagtggacaatcagagggttatggctttattgagtttattagtcatgctgctgcagaaaggaatctgcaagcatataatggtaccttgatgcctaatattgagcaaaatttcagactcaactgggcttcactcggttctggtgaaaaacgttctgataatggtcctgaatatacaatatttgttggtgacttggcagccgatgtttctgattatatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="115473" stop="118233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115773" g_stop="116121" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="349" r_length="349" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116122" i_stop="117682" i_length="1561">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117683" g_stop="117933" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="600" r_length="251" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E329974" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115773" e_stop="116121"/>
          <exon e_start="117683" e_stop="117933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCGTTCCCCCCCTCTCTGAACCCCATTTCATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGCAACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAAACTGGAGAGGTTTGTTTATATAAACGCCTCTTTTTTTTCTTGAACAATTTGATATAGATTCTTGGTAAGTTTTCGAATGGTTCTTGTTCTTGAATGAGTTTGAAAAATTTATTGGGGTACAAAACGATAAGTTCTTTCGTATTGAATGTTTATTTGAGTAATGTTAATTTGATAGTCTCTCTACATATAGTGAATATGATGTAGTTTCATAGCAAAAAAACTTTCGGTTACATTCTTGGTTAAATGTATGTGAATAAACTGTTATTTGTATTCAGTGACTTGTCTTTCATGGTTGGTGAAAGGTATGAGGGTATGCTGTCGTTTGTATTCAGTGGCTAGTATTAACTTTGTTGGCTAGTATTAACTTTGTTTATATGTAAGCTTAGTGTGTCAATATGCTGTTGTTTGTATTCAGTAACTTGTGTTATGTTGGTGAAAGATATGTGAATATGCTGTAGTTTGTATCAGAAACTTTCTTTACCTTGGTGGTAAAACCAGTGTGTGAAAGGCGATTCATTGCCTGAGGTGATCTCCAAAAGGCGACGCCATGGAGACAAAAGGCAAGAGGCAAGAAAGGCGGGAAAGGTGTCACCTTTTGTATTATCTTTAAAAAATGCAACCAATTTAGGTTTTTAAAAGTTAAAAGGTACTTTTTGGGTTTTCGACCCTACTCCTCCCACGACCAGCCAGACTTTTTCAGCTACTTCAAAGTCCAACCAATACATATTTCTTCTTCCGATTTTCTTCCTCTATTTTTTTATCGTCTTCTTCATACTTTAGAGTCACTTCTATCTCTATTTGACTTTTGTTCTGTTTTTTTCTCATTCAAGTTTTACACTTTTAGTATGTACCATGTATTTTCAGTTTTTGAATTGAAACATTTGCTAATATGTTATTGCTATTGAGAATCTGATTATTTACATATGCAATTAATATTTTAACTTTTTGGTATTAATTGATATCACATTAAAAAAAGGCAGACCCTTGTCGCCTTTTATCGCCTTTCGCCGTCCAAAACACGGGGTAAAACATAAAAGTATGCATCATGCAAATGCAGAAGTTTGTATTCATGAACTTGTATTACCTCTTCGTTGAAGGGATGTGAGTATGCTGTAATTTCTCTTTTGCAACCTGTATTGTGTTACGGTTTATCCTGAACATTTTGAGATTAACCATAAACAAGGCAACCTTGCTGGTTCATTCTTTTATTGACTTTGGGTATTGACACTAGGAAGGGTTTTGGTGAATGCTTTTGCCAATTGTTACATTATTTGAGATAGTGAAAGAAGGGAGCTAATAATCCTTACACAACCTTATTAAATTAATGAATAACTCCGTGCCTAAATCTGTGTGTAAACTTGTTCATACTAAATGATTGCGTGGTGGTTGCCTTTAGGTGCATCTTGACGAAATATACCAAAAAACATTCACTTGCCCCCTCCCCCTCCCCTCTCTAATTTAACTTTCTTGTCTTTTGTACTGTATGAGCAGCATTGTTACTACTATTGACAGTCTTTTTTCTCTTTCACTTGCCCTTTTTAGAGATATAAACTGTTTGTCTATTATATAGGTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAATCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGTACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCTGGTGAAAAACGTTCTGATAATGGTCCTGAATATACAATATTTGTTGGTGACTTGGCAGCCGATGTTTCTGATTATATGCT</genome_strand>
        <mrna_strand>CACCGTTCCCCCCCTCTCTGAACCCCATTTGATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGCAACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAAACTGGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAATCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGTACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCTGGTGAAAAACGTTCTGATAATGGTCCTGAATATACAATATTTGTTGGTGACTTGGCAGCCGATGTTTCTGATTATATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E337710" ref_strand="+" ref_description="SGN-E337710 	[cTOE-17-F20]">
      <seq>ttccccccctctctgaaccccatttcatcacgatgcaaccagcgaattccatggttccaccaccacagtaccagcagacacagcagtggatggctcagccgccgccgcagtatcaggttgcgcctccgcagcaatcgggatattactaccagcaacctcagcaacagggcggagttcctccaccccaacaacaacaacttcagtacaacgcctctggtttggctgctactgccggttctgttcagccgactagtgctgatgagatccgaagcctttggatcggagatctacagttttggatggatgagcaataccttctcaactgtttcgcacaaactggagaggtgacctctgctaaagttatccgtaacaagcaaagtggacaatcagagggttatggctttattgagtttattagtcatgctgctgcagaaaggaatctgcaagcatataatggtaccttgatgcctaatattgagcaaaatttcagactcaactgggcttcactcggttctggtgaaaaacgttctgataatggtcctgaatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="115478" stop="118187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115778" g_stop="116121" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116122" i_stop="117682" i_length="1561">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117683" g_stop="117887" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="549" r_length="205" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E337710" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115778" e_stop="116121"/>
          <exon e_start="117683" e_stop="117887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCCCCCTCTCTGAACCCCATTTCATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGCAACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAAACTGGAGAGGTTTGTTTATATAAACGCCTCTTTTTTTTCTTGAACAATTTGATATAGATTCTTGGTAAGTTTTCGAATGGTTCTTGTTCTTGAATGAGTTTGAAAAATTTATTGGGGTACAAAACGATAAGTTCTTTCGTATTGAATGTTTATTTGAGTAATGTTAATTTGATAGTCTCTCTACATATAGTGAATATGATGTAGTTTCATAGCAAAAAAACTTTCGGTTACATTCTTGGTTAAATGTATGTGAATAAACTGTTATTTGTATTCAGTGACTTGTCTTTCATGGTTGGTGAAAGGTATGAGGGTATGCTGTCGTTTGTATTCAGTGGCTAGTATTAACTTTGTTGGCTAGTATTAACTTTGTTTATATGTAAGCTTAGTGTGTCAATATGCTGTTGTTTGTATTCAGTAACTTGTGTTATGTTGGTGAAAGATATGTGAATATGCTGTAGTTTGTATCAGAAACTTTCTTTACCTTGGTGGTAAAACCAGTGTGTGAAAGGCGATTCATTGCCTGAGGTGATCTCCAAAAGGCGACGCCATGGAGACAAAAGGCAAGAGGCAAGAAAGGCGGGAAAGGTGTCACCTTTTGTATTATCTTTAAAAAATGCAACCAATTTAGGTTTTTAAAAGTTAAAAGGTACTTTTTGGGTTTTCGACCCTACTCCTCCCACGACCAGCCAGACTTTTTCAGCTACTTCAAAGTCCAACCAATACATATTTCTTCTTCCGATTTTCTTCCTCTATTTTTTTATCGTCTTCTTCATACTTTAGAGTCACTTCTATCTCTATTTGACTTTTGTTCTGTTTTTTTCTCATTCAAGTTTTACACTTTTAGTATGTACCATGTATTTTCAGTTTTTGAATTGAAACATTTGCTAATATGTTATTGCTATTGAGAATCTGATTATTTACATATGCAATTAATATTTTAACTTTTTGGTATTAATTGATATCACATTAAAAAAAGGCAGACCCTTGTCGCCTTTTATCGCCTTTCGCCGTCCAAAACACGGGGTAAAACATAAAAGTATGCATCATGCAAATGCAGAAGTTTGTATTCATGAACTTGTATTACCTCTTCGTTGAAGGGATGTGAGTATGCTGTAATTTCTCTTTTGCAACCTGTATTGTGTTACGGTTTATCCTGAACATTTTGAGATTAACCATAAACAAGGCAACCTTGCTGGTTCATTCTTTTATTGACTTTGGGTATTGACACTAGGAAGGGTTTTGGTGAATGCTTTTGCCAATTGTTACATTATTTGAGATAGTGAAAGAAGGGAGCTAATAATCCTTACACAACCTTATTAAATTAATGAATAACTCCGTGCCTAAATCTGTGTGTAAACTTGTTCATACTAAATGATTGCGTGGTGGTTGCCTTTAGGTGCATCTTGACGAAATATACCAAAAAACATTCACTTGCCCCCTCCCCCTCCCCTCTCTAATTTAACTTTCTTGTCTTTTGTACTGTATGAGCAGCATTGTTACTACTATTGACAGTCTTTTTTCTCTTTCACTTGCCCTTTTTAGAGATATAAACTGTTTGTCTATTATATAGGTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAATCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGTACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCTGGTGAAAAACGTTCTGATAATGGTCCTGAATATA</genome_strand>
        <mrna_strand>TTCCCCCCCTCTCTGAACCCCATTTCATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGCAACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAAACTGGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAATCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGTACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCTGGTGAAAAACGTTCTGATAATGGTCCTGAATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E567669" ref_strand="+" ref_description="SGN-E567669 	[11831]">
      <seq>caagggttatggttttgttaagtttggggatgaaagtgagcagttacgtgctatgactgagatgaatggacagttttgctccactaggcccatgcggattggtcctgcagctaataagaagagtatgggtggtcaaagtcaagcttcgtatcaaagttcacctgggaactcaaaatgaggatgacccttctaataccactatttttgttgggcaacgttggattccaatataacggatgaacatctaaggcagatatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="117709" stop="121086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118009" g_stop="118151" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118152" i_stop="120596" i_length="2445">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.916" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120597" g_stop="120652" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="200" r_length="57" r_score="0.929"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120653" i_stop="120727" i_length="75">
            <donor d_prob="0.995" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120728" g_stop="120786" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="261" r_length="61" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E567669" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>258</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E567669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118009" e_stop="118151"/>
          <exon e_start="120597" e_stop="120652"/>
          <exon e_start="120728" e_stop="120786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGGTTATGGTTTTGTTAAGTTTGGGGATGAAAGTGAGCAGTTGCGCGCTATGACTGAGATGAATGGACAGTTTTGCTCCACTAGGCCCATGCGGATTGGTCCCGCAGCTAACAAGAAGAGTATGGGTGGTCAAAGTCAAGGTATGGCTCAACCTAGTTGGTATATGTATTGTGTTGTGTGGTAATCTTTGTAGCAGTTAAGTGAAACAAATCCAGCTTGCAGTTGTTTGCTAACGTCTGTCGGCATTTAGATTCTGGATCTTGTCTTGTTTAGTTGTCATAAATTCCTTTAGTGATCAAGTTGTGATTGCTCGAGGATGCTATTCCTTTAATTTGGTGGGTGAAGTGATAGTCTATATTTGTTCTGCTTGCCTATGCAGGTGTTATGTTTTCTTTCATTGGTTATGCTCTTGAATTTTTGATGAGTACCCAGCTATCGAAGTCATTTCGTTCCAGTAGTTAAAAACTTCCCCTTGAAATATTAAATCTCATAAAACTCCGCTTGTCTCCAAGCAGGATGATTTGGAGGCTCTATGATATAAGGGCCTGGATGCTTGTTTCAGCTGAAATACCTTTTAGGACGTGGTGTGGCGTAAGTCAGTTCATTTAAATGTGGTTAAATTTCGCTATGTAGGATCCTCTTGACATTTATTCTTTCTAAGTTTTGCTACTTTTTCCCATTACTCCATACTCCAGTCAGATTGCTTTTTCTTTATTATCAGCCATTATACTTCATCATTACTTTTCAGCCATTTTACTTTGTCTTTAATTTTCAGTCATTTTACTTCACCATTACTTTCCAGTCATTTTGCTTTATCATTATGTTTCAGCCATTTCGCTTTAGCATTATGTTTCAGCCATTTCGCTTTAGCATTATGTTTCAGCCTTTTCACTTTAGCATTATGTTTCAGCCATTTCTTTTAGTGTTATGTTTCCGCCATTTCACTTTAGCGTTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTTTCTTTAGTGTTATGCTTCCGCCATTTCACTTTAGCGTTATGTTTCAGCCATTTCACTTTTGCGTTGTGTTTCAGCCATTTCACTTTAGCGTTGTGTTTCAGCCATTTCACTTTAGCGTTATATTTCAGCCATTTCACTTTAGTGTTATGTTTCAGCCATTTCACTTTAGCGTTATGTTTCAGCCTTCTAATTCTTTAATTCCAATATCTTGTTAGCTTGCTCGTATTACACTCTGATCTTTAGTATACCTCTACGATTTGTGGCCAGTCTCATTCATTAATTTAGCAATCCTAGTCAATCTTAGTTCTGCTCCATTTACCTTGTGAGCCTGTTCAGTAAATTCCCCTTCATAGGGACTAGAAGCTTCCTGCCATCATTTGTTTATTGTTGGTACAGCAGTTCAGTACTCATTTTTGTGATGCTATTACTATTTGGGGGGTGTTAAAATCATTTTTTCTTCGACTATGATTTTTTTCTTGTTTTCAAATTATGAACTAATATACTTGGAATACTTATTATACAATTAATTCAGATATCTGTAGGTTTTATTCAAGAAGCTTGAAGAATCTATGCCCATTAGCAAATTAATAGTAATATCTTCTTGATCAAAAATGGGATTATAATTTTTATCTACTGGAGTGCTGGTAGCTGTATGTATAGCTACTTGTTAGTTGTTACATTATTTAGGAAACTAGCACCCCCTTCCTGCCTTTTCTCGCCTTTCTTGTTTGATAGGCACGTGCCAAAGCATTCAAAAATAAAATTCATGCATGAAATAGTATGTAACAAAATAATGATGTGCGGGCTGGCAATTCATGATATTATATAGAAATTGCAGATCCATCTGATGGTGTGTATACAACTTCTAAATAATTTTTCTATTTGTATATTTATATATTGGTCTTCCTCTTGTCCCTTTGCCAAACTATGGCCCCATCCTTCACAAATTTGAACATGCATCTTTTCTTGCTTCTGAATCCCAAAAGCACATCTGAGTATATACATTGTTGTATGTGAAGAACCTTTTTTTGGGTGATCCATCAGTTGAAATGTGTGTCCTTTTCTCGAATGCTTGATTGCATCTCCAAAACTGTAAAACATGCCTCTTGATTTTCTTAGACCTTTTAGTCTGTCTGTCAGCTTGTGTTCTCAATATATATACATATTCTACTTCTTTTGAGACCTGTAAGAGCTAAAAGTTACTAGTCTTCTTGCCCTGTTGGAACAATGCAATCATAAGTCTGATGCTTGAACTACTTAATTGTGAAATGATAGTGCAGTCTCATCTCTTGAATCATATATAATAGTGTCCTCTTACTGGGTACCTTTCCACTTATTTGTTCTAGTGATGGTGATAGTGGTAGTTTTCTGACCAGCCTTTGCCTTGTAGTTATGGTTTATTTATGATACATACATAGGCTTTCTAGTTTTGTATTCCTACTGTCCTTTCATTGCAATAATGTGCAATGTACTTCATCTTACTCATGGAGCATAAAGTTCACCCTCTATTCACATTTGCCTCTTCCATTTGCAGCTTCGTATCAAAGTTCACCT-GGAACTCAAAATGAGGACGACCCATCTAATACCACTGTCAGTACATTTCTTTCTGGTATCATTTGATGTTTTCTTGGCTTGTACTCATATCCAAATGAATTTTCGTTGCAGATTTTTGTTGGG-AAC-TTGGATTCCAATATAACGGATGAACATTTAAGGCAGATTTTTGG</genome_strand>
        <mrna_strand>CAAGGGTTATGGTTTTGTTAAGTTTGGGGATGAAAGTGAGCAGTTACGTGCTATGACTGAGATGAATGGACAGTTTTGCTCCACTAGGCCCATGCGGATTGGTCCTGCAGCTAATAAGAAGAGTATGGGTGGTCAAAGTCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTATCAAAGTTCACCTGGGAACTCAAAATGAGGATGACCCTTCTAATACCACT...........................................................................ATTTTTGTTGGGCAACGTTGGATTCCAATATAACGGATGAACATCTAAGGCAGATATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E582288" ref_strand="+" ref_description="SGN-E582288 	[7921]">
      <seq>tgctatgactgagatgaatggacagttttgctgcactaagcccatgcggattggtcctgcagctaataagaagagtatgggtggtcaaagtcaagcttcgtatcagagttcacctgggaactcaaaatgaggatgacccttctaataccactatttttgttgggaacttggattccaatataacggatgaacatctaaggcagatttttggacattatgggcagttgcttcatgtaaaaataccagtaggcaagcggtgtggctttattcagtttgctgacagaagttgtgctgaggaagctatacgggtattaaatggaactcagctgggtggacaaagcatccgtctttcctggggtcgaagtcctgcaaacaagcagcaggctcaggttgatccaaaccaatatggtggttattatgggtatacagctggatatgatggttatggttatgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="117758" stop="121510"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118057" g_stop="118151" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118152" i_stop="120596" i_length="2445">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.916" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120597" g_stop="120652" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="152" r_length="57" r_score="0.911"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120653" i_stop="120727" i_length="75">
            <donor d_prob="0.995" d_score="0.90"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120728" g_stop="120858" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="283" r_length="131" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="120859" i_stop="120947" i_length="89">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120948" g_stop="121047" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="383" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="121048" i_stop="121137" i_length="90">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121138" g_stop="121210" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="456" r_length="73" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E582288" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E582288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118057" e_stop="118151"/>
          <exon e_start="120597" e_stop="120652"/>
          <exon e_start="120728" e_stop="120858"/>
          <exon e_start="120948" e_stop="121047"/>
          <exon e_start="121138" e_stop="121210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTATGACTGAGATGAATGGACAGTTTTGCTCCACTAGGCCCATGCGGATTGGTCCCGCAGCTAACAAGAAGAGTATGGGTGGTCAAAGTCAAGGTATGGCTCAACCTAGTTGGTATATGTATTGTGTTGTGTGGTAATCTTTGTAGCAGTTAAGTGAAACAAATCCAGCTTGCAGTTGTTTGCTAACGTCTGTCGGCATTTAGATTCTGGATCTTGTCTTGTTTAGTTGTCATAAATTCCTTTAGTGATCAAGTTGTGATTGCTCGAGGATGCTATTCCTTTAATTTGGTGGGTGAAGTGATAGTCTATATTTGTTCTGCTTGCCTATGCAGGTGTTATGTTTTCTTTCATTGGTTATGCTCTTGAATTTTTGATGAGTACCCAGCTATCGAAGTCATTTCGTTCCAGTAGTTAAAAACTTCCCCTTGAAATATTAAATCTCATAAAACTCCGCTTGTCTCCAAGCAGGATGATTTGGAGGCTCTATGATATAAGGGCCTGGATGCTTGTTTCAGCTGAAATACCTTTTAGGACGTGGTGTGGCGTAAGTCAGTTCATTTAAATGTGGTTAAATTTCGCTATGTAGGATCCTCTTGACATTTATTCTTTCTAAGTTTTGCTACTTTTTCCCATTACTCCATACTCCAGTCAGATTGCTTTTTCTTTATTATCAGCCATTATACTTCATCATTACTTTTCAGCCATTTTACTTTGTCTTTAATTTTCAGTCATTTTACTTCACCATTACTTTCCAGTCATTTTGCTTTATCATTATGTTTCAGCCATTTCGCTTTAGCATTATGTTTCAGCCATTTCGCTTTAGCATTATGTTTCAGCCTTTTCACTTTAGCATTATGTTTCAGCCATTTCTTTTAGTGTTATGTTTCCGCCATTTCACTTTAGCGTTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTTTCTTTAGTGTTATGCTTCCGCCATTTCACTTTAGCGTTATGTTTCAGCCATTTCACTTTTGCGTTGTGTTTCAGCCATTTCACTTTAGCGTTGTGTTTCAGCCATTTCACTTTAGCGTTATATTTCAGCCATTTCACTTTAGTGTTATGTTTCAGCCATTTCACTTTAGCGTTATGTTTCAGCCTTCTAATTCTTTAATTCCAATATCTTGTTAGCTTGCTCGTATTACACTCTGATCTTTAGTATACCTCTACGATTTGTGGCCAGTCTCATTCATTAATTTAGCAATCCTAGTCAATCTTAGTTCTGCTCCATTTACCTTGTGAGCCTGTTCAGTAAATTCCCCTTCATAGGGACTAGAAGCTTCCTGCCATCATTTGTTTATTGTTGGTACAGCAGTTCAGTACTCATTTTTGTGATGCTATTACTATTTGGGGGGTGTTAAAATCATTTTTTCTTCGACTATGATTTTTTTCTTGTTTTCAAATTATGAACTAATATACTTGGAATACTTATTATACAATTAATTCAGATATCTGTAGGTTTTATTCAAGAAGCTTGAAGAATCTATGCCCATTAGCAAATTAATAGTAATATCTTCTTGATCAAAAATGGGATTATAATTTTTATCTACTGGAGTGCTGGTAGCTGTATGTATAGCTACTTGTTAGTTGTTACATTATTTAGGAAACTAGCACCCCCTTCCTGCCTTTTCTCGCCTTTCTTGTTTGATAGGCACGTGCCAAAGCATTCAAAAATAAAATTCATGCATGAAATAGTATGTAACAAAATAATGATGTGCGGGCTGGCAATTCATGATATTATATAGAAATTGCAGATCCATCTGATGGTGTGTATACAACTTCTAAATAATTTTTCTATTTGTATATTTATATATTGGTCTTCCTCTTGTCCCTTTGCCAAACTATGGCCCCATCCTTCACAAATTTGAACATGCATCTTTTCTTGCTTCTGAATCCCAAAAGCACATCTGAGTATATACATTGTTGTATGTGAAGAACCTTTTTTTGGGTGATCCATCAGTTGAAATGTGTGTCCTTTTCTCGAATGCTTGATTGCATCTCCAAAACTGTAAAACATGCCTCTTGATTTTCTTAGACCTTTTAGTCTGTCTGTCAGCTTGTGTTCTCAATATATATACATATTCTACTTCTTTTGAGACCTGTAAGAGCTAAAAGTTACTAGTCTTCTTGCCCTGTTGGAACAATGCAATCATAAGTCTGATGCTTGAACTACTTAATTGTGAAATGATAGTGCAGTCTCATCTCTTGAATCATATATAATAGTGTCCTCTTACTGGGTACCTTTCCACTTATTTGTTCTAGTGATGGTGATAGTGGTAGTTTTCTGACCAGCCTTTGCCTTGTAGTTATGGTTTATTTATGATACATACATAGGCTTTCTAGTTTTGTATTCCTACTGTCCTTTCATTGCAATAATGTGCAATGTACTTCATCTTACTCATGGAGCATAAAGTTCACCCTCTATTCACATTTGCCTCTTCCATTTGCAGCTTCGTATCAAAGTTCACCT-GGAACTCAAAATGAGGACGACCCATCTAATACCACTGTCAGTACATTTCTTTCTGGTATCATTTGATGTTTTCTTGGCTTGTACTCATATCCAAATGAATTTTCGTTGCAGATTTTTGTTGGGAACTTGGATTCCAATATAACGGATGAACATTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAGGTAAAGTAATAAATGAGCCTTCTCAAGAGGATCAATCTCAATTCTCAACGCTTTGAGAATTAACACATGGTCCATCCTTGTTATTGCAGAAGTTGTGCTGAGGAAGCTCTACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAGGTAAGGAATGCCAAAATTATAATTTCTGTTTTCGGCACTTGCCAGTCAAATACCAATCTGAATCTTATGTTTCATCTCTGGTATGTGCAGCCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCC</genome_strand>
        <mrna_strand>TGCTATGACTGAGATGAATGGACAGTTTTGCTGCACTAAGCCCATGCGGATTGGTCCTGCAGCTAATAAGAAGAGTATGGGTGGTCAAAGTCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTATCAGAGTTCACCTGGGAACTCAAAATGAGGATGACCCTTCTAATACCACT...........................................................................ATTTTTGTTGGGAACTTGGATTCCAATATAACGGATGAACATCTAAGGCAGATTTTTGGACATTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAG.........................................................................................AAGTTGTGCTGAGGAAGCTATACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCCTGGGGTCGAAGTCCTGCAAACAAGCAGCAG..........................................................................................GCTCAGGTTGATCCAAACCAATATGGTGGTTATTATGGGTATACAGCTGGATATGATGGTTATGGTTATGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E592196" ref_strand="-" ref_description="SGN-E592196 	[45925]">
      <seq>gcagctaataagaagagtatgggtggtcaaagtcaagcttcgtatcaaagttcacctggaactcaaaatgaggatgacccttcctaataccactatttttgtttgggaactttggattccaatataacggatgaacatctaaggcagatttttggacattatgggcagttgcttcatgtaaaaataccagtaggcaagcggtgtggctttattcagtttgctgacagaagttgtgctgaggaagctatacgggtattaaatggaactcagctgggtggacaaagcatccgtctttcctggggtcgaagtcctgcaaacaagcagcagcctcaggttgatccaaaccaatatgctggttattatgggtatacagctggatatgatggttatggttatgctccccctgctcaggatccaaatcagtattatgcgggctatgctggatatggaaattacgcacaacctcaacagcagcagcaagttttgcagcatcctcagtgatatgctggtcaaaggatttgctgagtgcttcccggcgtgatttgtgtattgatgttataagcgggacatgagattatcagttggaatccagatgtgtatttcactatctttgggtgttggaaacttttgtaggctatttattgaggatacgatttatggttctgatcaactgattgtgtgctgtttgttttttttcgtgttgccattttggtacttagatatgagatctagatatacttgaaggtctcggagaagtgtaggcatgtaattttatacttgtgtgctttttggctatctctgcaatgcttaacactctattttgctcgttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="117815" stop="122144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118115" g_stop="118151" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118152" i_stop="120596" i_length="2445">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.916" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120597" g_stop="120652" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="94" r_length="57" r_score="0.929"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120653" i_stop="120727" i_length="75">
            <donor d_prob="0.995" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120728" g_stop="120858" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="227" r_length="133" r_score="0.954"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="120859" i_stop="120947" i_length="89">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120948" g_stop="121047" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="327" r_length="100" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="121048" i_stop="121137" i_length="90">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121138" g_stop="121308" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="498" r_length="171" r_score="0.977"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="121309" i_stop="121505" i_length="197">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="121506" g_stop="121844" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="831" r_length="333" r_score="0.885"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E592196" ref_strand="-">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>834</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E592196" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="118115" e_stop="118151"/>
          <exon e_start="120597" e_stop="120652"/>
          <exon e_start="120728" e_stop="120858"/>
          <exon e_start="120948" e_stop="121047"/>
          <exon e_start="121138" e_stop="121308"/>
          <exon e_start="121506" e_stop="121844"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCTAACAAGAAGAGTATGGGTGGTCAAAGTCAAGGTATGGCTCAACCTAGTTGGTATATGTATTGTGTTGTGTGGTAATCTTTGTAGCAGTTAAGTGAAACAAATCCAGCTTGCAGTTGTTTGCTAACGTCTGTCGGCATTTAGATTCTGGATCTTGTCTTGTTTAGTTGTCATAAATTCCTTTAGTGATCAAGTTGTGATTGCTCGAGGATGCTATTCCTTTAATTTGGTGGGTGAAGTGATAGTCTATATTTGTTCTGCTTGCCTATGCAGGTGTTATGTTTTCTTTCATTGGTTATGCTCTTGAATTTTTGATGAGTACCCAGCTATCGAAGTCATTTCGTTCCAGTAGTTAAAAACTTCCCCTTGAAATATTAAATCTCATAAAACTCCGCTTGTCTCCAAGCAGGATGATTTGGAGGCTCTATGATATAAGGGCCTGGATGCTTGTTTCAGCTGAAATACCTTTTAGGACGTGGTGTGGCGTAAGTCAGTTCATTTAAATGTGGTTAAATTTCGCTATGTAGGATCCTCTTGACATTTATTCTTTCTAAGTTTTGCTACTTTTTCCCATTACTCCATACTCCAGTCAGATTGCTTTTTCTTTATTATCAGCCATTATACTTCATCATTACTTTTCAGCCATTTTACTTTGTCTTTAATTTTCAGTCATTTTACTTCACCATTACTTTCCAGTCATTTTGCTTTATCATTATGTTTCAGCCATTTCGCTTTAGCATTATGTTTCAGCCATTTCGCTTTAGCATTATGTTTCAGCCTTTTCACTTTAGCATTATGTTTCAGCCATTTCTTTTAGTGTTATGTTTCCGCCATTTCACTTTAGCGTTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTCACTTTAGCATTATGTTTCAGCCATTTTTCTTTAGTGTTATGCTTCCGCCATTTCACTTTAGCGTTATGTTTCAGCCATTTCACTTTTGCGTTGTGTTTCAGCCATTTCACTTTAGCGTTGTGTTTCAGCCATTTCACTTTAGCGTTATATTTCAGCCATTTCACTTTAGTGTTATGTTTCAGCCATTTCACTTTAGCGTTATGTTTCAGCCTTCTAATTCTTTAATTCCAATATCTTGTTAGCTTGCTCGTATTACACTCTGATCTTTAGTATACCTCTACGATTTGTGGCCAGTCTCATTCATTAATTTAGCAATCCTAGTCAATCTTAGTTCTGCTCCATTTACCTTGTGAGCCTGTTCAGTAAATTCCCCTTCATAGGGACTAGAAGCTTCCTGCCATCATTTGTTTATTGTTGGTACAGCAGTTCAGTACTCATTTTTGTGATGCTATTACTATTTGGGGGGTGTTAAAATCATTTTTTCTTCGACTATGATTTTTTTCTTGTTTTCAAATTATGAACTAATATACTTGGAATACTTATTATACAATTAATTCAGATATCTGTAGGTTTTATTCAAGAAGCTTGAAGAATCTATGCCCATTAGCAAATTAATAGTAATATCTTCTTGATCAAAAATGGGATTATAATTTTTATCTACTGGAGTGCTGGTAGCTGTATGTATAGCTACTTGTTAGTTGTTACATTATTTAGGAAACTAGCACCCCCTTCCTGCCTTTTCTCGCCTTTCTTGTTTGATAGGCACGTGCCAAAGCATTCAAAAATAAAATTCATGCATGAAATAGTATGTAACAAAATAATGATGTGCGGGCTGGCAATTCATGATATTATATAGAAATTGCAGATCCATCTGATGGTGTGTATACAACTTCTAAATAATTTTTCTATTTGTATATTTATATATTGGTCTTCCTCTTGTCCCTTTGCCAAACTATGGCCCCATCCTTCACAAATTTGAACATGCATCTTTTCTTGCTTCTGAATCCCAAAAGCACATCTGAGTATATACATTGTTGTATGTGAAGAACCTTTTTTTGGGTGATCCATCAGTTGAAATGTGTGTCCTTTTCTCGAATGCTTGATTGCATCTCCAAAACTGTAAAACATGCCTCTTGATTTTCTTAGACCTTTTAGTCTGTCTGTCAGCTTGTGTTCTCAATATATATACATATTCTACTTCTTTTGAGACCTGTAAGAGCTAAAAGTTACTAGTCTTCTTGCCCTGTTGGAACAATGCAATCATAAGTCTGATGCTTGAACTACTTAATTGTGAAATGATAGTGCAGTCTCATCTCTTGAATCATATATAATAGTGTCCTCTTACTGGGTACCTTTCCACTTATTTGTTCTAGTGATGGTGATAGTGGTAGTTTTCTGACCAGCCTTTGCCTTGTAGTTATGGTTTATTTATGATACATACATAGGCTTTCTAGTTTTGTATTCCTACTGTCCTTTCATTGCAATAATGTGCAATGTACTTCATCTTACTCATGGAGCATAAAGTTCACCCTCTATTCACATTTGCCTCTTCCATTTGCAGCTTCGTATCAAAGTTCACCTGGAACTCAAAATGAGGACGACCCAT-CTAATACCACTGTCAGTACATTTCTTTCTGGTATCATTTGATGTTTTCTTGGCTTGTACTCATATCCAAATGAATTTTCGTTGCAGATTTTTG-TTGGGAAC-TTGGATTCCAATATAACGGATGAACATTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAGGTAAAGTAATAAATGAGCCTTCTCAAGAGGATCAATCTCAATTCTCAACGCTTTGAGAATTAACACATGGTCCATCCTTGTTATTGCAGAAGTTGTGCTGAGGAAGCTCTACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAGGTAAGGAATGCCAAAATTATAATTTCTGTTTTCGGCACTTGCCAGTCAAATACCAATCTGAATCTTATGTTTCATCTCTGGTATGTGCAGCCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAGGTTTGATTAACCCGTTGAGCTTATTTATTAACTAAAGCTACTTTATACCGACATCTCCATTTTGGAATAGAAATGACTGAAATTTTATGAGATAATATCTTTTTACTTGTATGGCCAAATGGGTTCTTAAACTGATAATAGTTTTTTCATAAAAAATAATGAGTTGTTTGAATACTTATCTCACTTCCTCCTTGCAGTGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATAC-T-TGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTTGC</genome_strand>
        <mrna_strand>GCAGCTAATAAGAAGAGTATGGGTGGTCAAAGTCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTATCAAAGTTCACCTGGAACTCAAAATGAGGATGACCCTTCCTAATACCACT...........................................................................ATTTTTGTTTGGGAACTTTGGATTCCAATATAACGGATGAACATCTAAGGCAGATTTTTGGACATTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAG.........................................................................................AAGTTGTGCTGAGGAAGCTATACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCCTGGGGTCGAAGTCCTGCAAACAAGCAGCAG..........................................................................................CCTCAGGTTGATCCAAACCAATATGCTGGTTATTATGGGTATACAGCTGGATATGATGGTTATGGTTATGCTCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAG.....................................................................................................................................................................................................TG--ATATGCTGGTCAAAGGATTTGCTGAGTGCTTCCCGGCGTGATTTGTGTATTGATGTTATAAGCGGGACATGAGATTATCAGTTGGAATCCAGATGTGTATTTCACTATCTTTGGGTGTTGGAAACTTTTGTAGGCTATTT-ATTGAGGATACGATTTATGGTTCTGATCAACTGATTGTGTGCTGTTTG---TTTT-TTTTCGTGTTGCCATTTTGGTACTTAGATATGAGATCTAGATATACTTGAAGGTC-TCGGAGAAGTGTAGGCATGTAATTTTATACTTGTGTGCTTTTTGGCTATCTCTGCAATGCTTAACACTCTATTTTGCTCGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E545658" ref_strand="-" ref_description="SGN-E545658 	[TUS-68-J23]">
      <seq>atttaaggcagatttttggacactatgggcagttgcttcatgtaaaaataccagtaggcaagcggtgtggctttattcagtttgctgacagaagttgtgctgaggaagctctacgggctattaaatggaactcagctgggtggacaaagcatccgtctttcatggggtcgaagtcctgcaaacaagcagcagcctcagcttgatccaaaccaatatgctggttattatgggtatactgctggatatgaaggttatggttatgccccccctgctcaggatccaaatcagtattatgcgggctatgctggatatggaaattacgcacaacctcaacagcagcagcaagttttgcagcatcctcagtgatatatgctggtgaaaggatttactgagtgcttcccggcgtgatttgtgtattgatttcaaaagcgggacatgaggttatcagttgggatccagatgtgtatttcacaatcttagggtgttggaaacctttgtaggctatttcattgaggatacaatttatggtttcgatcaactgattgtatgctgtttgtttttttatttttgcgttgcccttttattacttagatatgagatctagatatacttgaaggtctttggagaagtgtaggcatgtaactgtatacttgtgctttttggctatcctggcaatgctgaacaccctattttgctcgttgctcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="120468" stop="122147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120768" g_stop="120858" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120859" i_stop="120947" i_length="89">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120948" g_stop="121047" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="192" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121048" i_stop="121137" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121138" g_stop="121308" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="363" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121309" i_stop="121505" i_length="197">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121506" g_stop="121842" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="700" r_length="337" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="705" polyA_stop="714"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E545658" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545658" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="120768" e_stop="120858"/>
          <exon e_start="120948" e_stop="121047"/>
          <exon e_start="121138" e_stop="121308"/>
          <exon e_start="121506" e_stop="121842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAGGTAAAGTAATAAATGAGCCTTCTCAAGAGGATCAATCTCAATTCTCAACGCTTTGAGAATTAACACATGGTCCATCCTTGTTATTGCAGAAGTTGTGCTGAGGAAGCTCTACGGG-TATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAGGTAAGGAATGCCAAAATTATAATTTCTGTTTTCGGCACTTGCCAGTCAAATACCAATCTGAATCTTATGTTTCATCTCTGGTATGTGCAGCCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAGGTTTGATTAACCCGTTGAGCTTATTTATTAACTAAAGCTACTTTATACCGACATCTCCATTTTGGAATAGAAATGACTGAAATTTTATGAGATAATATCTTTTTACTTGTATGGCCAAATGGGTTCTTAAACTGATAATAGTTTTTTCATAAAAAATAATGAGTTGTTTGAATACTTATCTCACTTCCTCCTTGCAGTGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATACTTGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTT</genome_strand>
        <mrna_strand>ATTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAG.........................................................................................AAGTTGTGCTGAGGAAGCTCTACGGGCTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAG..........................................................................................CCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAG.....................................................................................................................................................................................................TGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATACTTGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E549243" ref_strand="+" ref_description="SGN-E549243 	[TUS-68-J23]">
      <seq>atttaaggcagatttttggacactatgggcagttgcttcatgtaaaaataccagtaggcaagcggtgtggctttattcagtttgctgacagaagttgtgctgaggaagctctacgggtattaaatggaactcagctgggtggacaaagcatccgtctttcatggggtcgaagtcctgcaaacaagcagcagcctcagcttgatccaaaccaatatgctggttattatgggtatactgctggatatgaaggttatggttatgccccccctgctcaggatccaaatcagtattatgcgggctatgctggatatggaaattacgcacaacctcaacagcagcagcaagttttgcagcatcctcagtgatatatgctggtgaaaggatttactgagtgcttcccggcgtgatttgtgtattgatttcaaaagcgggacatgaggttatcagttgggatccagatgtgtatttcacaatcttagggtgttggaaacctttgtaggctatttcattgaggatacaatttatggtttcgatcaactgattgtatgctgattgtttttttatttttgcgttgcccttttattacttagatatgagatctagatatacttgaaggtctttggagaagtgtaggcatgtaactgtatacttgtgctttttggctatcctggcaatgctgaacaccctattttgctcgttgctcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="120468" stop="122147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120768" g_stop="120858" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120859" i_stop="120947" i_length="89">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120948" g_stop="121047" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="191" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121048" i_stop="121137" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121138" g_stop="121308" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="362" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121309" i_stop="121505" i_length="197">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121506" g_stop="121842" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="699" r_length="337" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E549243" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549243" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120768" e_stop="120858"/>
          <exon e_start="120948" e_stop="121047"/>
          <exon e_start="121138" e_stop="121308"/>
          <exon e_start="121506" e_stop="121842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAGGTAAAGTAATAAATGAGCCTTCTCAAGAGGATCAATCTCAATTCTCAACGCTTTGAGAATTAACACATGGTCCATCCTTGTTATTGCAGAAGTTGTGCTGAGGAAGCTCTACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAGGTAAGGAATGCCAAAATTATAATTTCTGTTTTCGGCACTTGCCAGTCAAATACCAATCTGAATCTTATGTTTCATCTCTGGTATGTGCAGCCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAGGTTTGATTAACCCGTTGAGCTTATTTATTAACTAAAGCTACTTTATACCGACATCTCCATTTTGGAATAGAAATGACTGAAATTTTATGAGATAATATCTTTTTACTTGTATGGCCAAATGGGTTCTTAAACTGATAATAGTTTTTTCATAAAAAATAATGAGTTGTTTGAATACTTATCTCACTTCCTCCTTGCAGTGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATACTTGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTT</genome_strand>
        <mrna_strand>ATTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAG.........................................................................................AAGTTGTGCTGAGGAAGCTCTACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAG..........................................................................................CCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAG.....................................................................................................................................................................................................TGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGATTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATACTTGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E310651" ref_strand="+" ref_description="SGN-E310651 	[cLEZ-19-D6]">
      <seq>tttaaggcagatttttggacactatgggcagttgcttcatgtaaaaataccagtaggcaagcggtgtggctttattcagtttgctgacagaagttgtgctgaggaagctctacgggtattaaatggaactcagctgggtggacaaagcatccgtctttcatggggtcgaagtcctgcaaacaagcagcagcctcagcttgatccaaaccaatatgctggttattatgggtatactgctggatatgaaggttatggttatgccccccctgctcaggatccaaatcagtattatgcgggctatgctggatatggaaattacgcacaacctcaacagcagcagcaagttttgcagcatcctcagtgatatatgctggtgaaaggatttactgagtgcttcccggcgtgatttgtgtattgatttcaaaagcgggacatgaggttatcagttgggatccagatgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="120469" stop="121906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120769" g_stop="120858" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120859" i_stop="120947" i_length="89">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120948" g_stop="121047" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="190" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121048" i_stop="121137" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121138" g_stop="121308" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="361" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121309" i_stop="121505" i_length="197">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121506" g_stop="121606" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="462" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E310651" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120769" e_stop="120858"/>
          <exon e_start="120948" e_stop="121047"/>
          <exon e_start="121138" e_stop="121308"/>
          <exon e_start="121506" e_stop="121606"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAGGTAAAGTAATAAATGAGCCTTCTCAAGAGGATCAATCTCAATTCTCAACGCTTTGAGAATTAACACATGGTCCATCCTTGTTATTGCAGAAGTTGTGCTGAGGAAGCTCTACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAGGTAAGGAATGCCAAAATTATAATTTCTGTTTTCGGCACTTGCCAGTCAAATACCAATCTGAATCTTATGTTTCATCTCTGGTATGTGCAGCCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAGGTTTGATTAACCCGTTGAGCTTATTTATTAACTAAAGCTACTTTATACCGACATCTCCATTTTGGAATAGAAATGACTGAAATTTTATGAGATAATATCTTTTTACTTGTATGGCCAAATGGGTTCTTAAACTGATAATAGTTTTTTCATAAAAAATAATGAGTTGTTTGAATACTTATCTCACTTCCTCCTTGCAGTGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTG</genome_strand>
        <mrna_strand>TTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAG.........................................................................................AAGTTGTGCTGAGGAAGCTCTACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAG..........................................................................................CCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAG.....................................................................................................................................................................................................TGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E582725" ref_strand="+" ref_description="SGN-E582725 	[8358]">
      <seq>acaaagcatccgtctttcctggggtcgaagtcctgcaaacaagcagcagcctcaggttgatccaaaccaatatgctggttattatgggtatacagctggatatgatggttatggttatgctccccctgctcaggatccaaatcagtattatgcgggctatgctggatatggaaattacgctcaacctcaacagcagcagcaagttttgcagcatcctcagtgatatgctggtcaaaggatttgctgagtgcttcccggcgtgatttgtgtattgatgttataagcgggacatgagattatcagttggaatccagatgtgtatttcactatctttggctgttggaaacttttgtaggctatttattgaggatacgatttatggttctgatcaactgattgtgtgctgtttgttttttttcgtgttgccattttggtacttagatctgagatctagatatacttgaaggtctcggagaagtgtaggcatgtaattttatacttgtgtgctttttggctatctcagcaatgcttaacactcaaaaaaagaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="120699" stop="122131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120999" g_stop="121047" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121048" i_stop="121137" i_length="90">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121138" g_stop="121308" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="220" r_length="171" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121309" i_stop="121505" i_length="197">
            <donor d_prob="0.956" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121506" g_stop="121786" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="493" r_length="273" r_score="0.890"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="539" polyA_stop="549"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E582725" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E582725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120999" e_stop="121047"/>
          <exon e_start="121138" e_stop="121308"/>
          <exon e_start="121506" e_stop="121786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAGGTAAGGAATGCCAAAATTATAATTTCTGTTTTCGGCACTTGCCAGTCAAATACCAATCTGAATCTTATGTTTCATCTCTGGTATGTGCAGCCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAGGTTTGATTAACCCGTTGAGCTTATTTATTAACTAAAGCTACTTTATACCGACATCTCCATTTTGGAATAGAAATGACTGAAATTTTATGAGATAATATCTTTTTACTTGTATGGCCAAATGGGTTCTTAAACTGATAATAGTTTTTTCATAAAAAATAATGAGTTGTTTGAATACTTATCTCACTTCCTCCTTGCAGTGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACT</genome_strand>
        <mrna_strand>ACAAAGCATCCGTCTTTCCTGGGGTCGAAGTCCTGCAAACAAGCAGCAG..........................................................................................CCTCAGGTTGATCCAAACCAATATGCTGGTTATTATGGGTATACAGCTGGATATGATGGTTATGGTTATGCTCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCTCAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAG.....................................................................................................................................................................................................TG--ATATGCTGGTCAAAGGATTTGCTGAGTGCTTCCCGGCGTGATTTGTGTATTGATGTTATAAGCGGGACATGAGATTATCAGTTGGAATCCAGATGTGTATTTCACTATCTTTGGCTGTTGGAAACTTTTGTAGGCTATTT-ATTGAGGATACGATTTATGGTTCTGATCAACTGATTGTGTGCTGTTTG---TTTT-TTTTCGTGTTGCCATTTTGGTACTTAGATCTGAGATCTAGATATACTTGAAGGTC-TCGGAGAAGTGTAGGCATGTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E219526" ref_strand="-" ref_description="SGN-E219526 	[cLEL-11-C10]">
      <seq>cagcaagttttgcagcatcctcagtgatatatgctggtgaaaggatttactgagtgcttcccggcgtgatttgtgtattgatttcaaaagcgggacatgaggttatcagttgggatccagatgtgtatttcacaatcttagggtgttggaaacctttgtaggctatttcattgaggatacaatttatggtttcgatcaactgattgtatgctgtttgtttttttatttttgcgttgcccttttattacttagatatgagatctagatatacttgaaggtctttggagaagtgtaggcatgtaactgtatacttgtgctttttggctatcctggcaatgctgaacaccctattttgctcgttgctccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="121187" stop="128983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121285" g_stop="121308" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121309" i_stop="121505" i_length="197">
            <donor d_prob="0.956" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121506" g_stop="121852" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="371" r_length="347" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121853" i_stop="122572" i_length="720">
            <donor d_prob="0.972" d_score="0.88"/>
            <acceptor a_prob="0.265" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="122573" g_stop="122599" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="398" r_length="27" r_score="0.556"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E219526" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E219526" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="121285" e_stop="121308"/>
          <exon e_start="121506" e_stop="121852"/>
          <exon e_start="122573" e_stop="122599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAAGTTTTGCAGCATCCTCAGGTTTGATTAACCCGTTGAGCTTATTTATTAACTAAAGCTACTTTATACCGACATCTCCATTTTGGAATAGAAATGACTGAAATTTTATGAGATAATATCTTTTTACTTGTATGGCCAAATGGGTTCTTAAACTGATAATAGTTTTTTCATAAAAAATAATGAGTTGTTTGAATACTTATCTCACTTCCTCCTTGCAGTGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATACTTGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTTGCTCATTTTGGTTCACCTTTCAATAGCAATTCTTACTAATGTTTCCTCCAAAATAATTGCAATCGTCTGAATGATTTCCGTGATAGTTTTATTTTGATAAAAATGTCTTATGTATTGTAGTCTTCAATACGTCTCCTGCGTTAGTTTCTTCATTCATGTATTGATGCCAATTGTCATATGACGTGGTTGAGTCCTTCTACCAGTCATAGTTGGACCCACGTTCTATCTAAATTTTAGCATTCAACAAACCCCGATGGCTGTAAATTCTTCTCTTCGTTGCTGTCACGCTTACATATTAGGCAGACAAGGTTTTCTATATATTTTGTGTGGTTGCTACTTGTTTTCGGCCACGCCTCAGTTCCAGCACGACAAGAAAATATTCTGGCGATATGCAATCTAAACTCCCAAAGTACCCAGACACAGCCCAAAATGTGTCTACGAATTAAAATCATCAACTCGGTAGGGTAGTTGTGCATGCCAGCTGCCATGTTTTGGGATCACATGTTTACGAAGTCAGTCTGATAATTGCATAACTTTTGACAAGTGCTGGAGCAGAGAAACTAGCCAACTTCTAAATTGAACACGTGGCACAGAAGACACTAATATTTAAGGATGTGGAGACAAAAAAACTGCTGATTTTTGCTATTTAGGCACATTATCCCTACCTCTTTTCATTCTATAAACACAGCTCTAAACCAGATACAATAGTATACTGAATTCTTTTCTTCAGCAGTGGCCAAGAACTTAAAAAAAAAAT</genome_strand>
        <mrna_strand>CAGCAAGTTTTGCAGCATCCTCAG.....................................................................................................................................................................................................TGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATACTTGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTTGCTCCAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E551169" ref_strand="+" ref_description="SGN-E551169 	[TUS-55-J2]">
      <seq>caacacctttggtactcttcagagggacgcccctcctgtgcgtctatcacctaattatccagaacctccacctgctaatcccacagaagactcagctaatgttgcagaacaaccaaagcaaatgagtgctgcttttgttaaggctgccaagcagcagttcgatgtgttggttgctgctcttcctttatcggatgggagtgaagaagcccaattgaaaagaattgcagaactccaggctgagaacgatgcagttggccaagaacttcaaaaacaactggaagctgcagagaaggagctaaagcaggtccaggagttgtttaaccaagcaacagataactgcctgaacttgaagaagccagaatgaataaggtagtagatatttcagtttgcttgaggagcccattcttgctggaatataccctggaggaacaacaaattgattgtgtccatgtctgttatgggtacatttattaactaattataattaggcatgctctgacattattttttttttaagttcttggccactgctgaagaaaagaattcagtatactattgtatctggtttagagctgtgtttatagaatgaaaagaggtagggataatgtgcctaaatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="124856" stop="122185"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124556" g_stop="124403" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124402" i_stop="123267" i_length="1136">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123266" g_stop="123186" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="235" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="123185" i_stop="123014" i_length="172">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123013" g_stop="122962" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="287" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="122961" i_stop="122816" i_length="146">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122815" g_stop="122485" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="618" r_length="331" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E551169" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124556" e_stop="124403"/>
          <exon e_start="123266" e_stop="123186"/>
          <exon e_start="123013" e_stop="122962"/>
          <exon e_start="122815" e_stop="122485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACACCTTTGGTACTCTTCAGAGGGACGCCCCTCCTGTGCGTCTATCACCTAATTATCCAGAACCTCCACCTGCTAATCCCACAGAAGACTCAGCTAATGTTGCAGAACAACCAAAGCAAATGAGTGCTGCTTTTGTTAAGGCTGCCAAGCAGGTGAAACTCCATACTCCATACCTTCACTTTTTCTGCTTATTCATCAACGAATATGAACAAGCCACAGACCAGGGTATAAAAGTAATCTGCGTGTACTTCGAGAATAGGGAATTTTCTCTTTTTTCGGAAGATCAAGATAAACTATTTAGTTTAGTTTCCTTTTTTGTGTAGACATTTTTTTTGTAAATGAGCCTGAATAAGTGATTGAACTTGTAGAATCCCTTTAAGAATAGGAAGGTATATCTTTGTGTTCCCTGTAAATGTTGTTGATTGCACCTTCTTGGTGCTGTATTACAAATGCACTTACCATTCCTTCAAAAAATCATTTTTGGACAAAATAATGTTTCTTTTGTCTTCTTTTGACTAGTATGTTTACTTTTGGAAACGTCAAATCTTTAGATATATGATGTGTTTGTGCAGTTCTATACAAGATAACACTAAGTTGTATCTTGGCTCATCATATCTAATGCGTACATGCAGTTCTATACCAGATGATATTAAGTCTTTGTTTGTTCAGACTTGAGACCTGCGTGGTTGAGTTCAAAGACCTTAGTCCTGATTCCTGAGACCAGTGTGGTTGAGTTCAAATACCTAGTCTTTTGTCCTTAGTTTAACGAGAAATACAATAATGCTATTAGCATCACCAACTACTTCAATAAAACTTGACTGAATCACATAATGGCGGACAAATTCCAACTACTAGCTGGACAGGATTGCATGCCTCTAGGGATTTTTACTAGAGAACTTGATGTCAGCCTCTCAGGTTTGGTAACCATGACATCTAGGCCAAGACTCACCGGGTAAACCTGGTGTCAAAACCGGAAAACTGAGTTCTAGTTTATCGCCCTTTAGCTGTCTTCTATGAAATGTATATGGACAACCCTGTGATTAGTTCTAAGGTGTTCAAGTTTACAGTTATGTTTCCCTTGTTTTCTTCTTGGCCTCACAATCAGAGGTTGTCTAATCTAGCATCCTATCAAACTTAAGCAGCACAGCCGACACTTGAGAGTAGCCTTGAGGATTGTGTGGCTCTAATTCAGACCAATTGCAAATTTTCATTGTGATCCTAAAGTGTATGCTTTGCTACAATGTCATTGTATTAAATCTATCTTCTCTTTTTCTTATCCTTCTTTGAGCAGTTCGATGTGTTGGTTGCTGCTCTTCCTTTATCGGATGGGAGTGAAGAAGCCCAATTGAAAAGAATTGCAGAACTCCAGGTATATGCTTCTTTGTGAATAATTGGTGGAATTCACTTTTTGACATCCTCTAATTCTGATGTGTTATAGCTTAACAGTATTTAAACTAAAAAAATAAAGAAGGATAAATAAAGATTAGTCTGTCTATTTTGGGCTTAGTAGTCTTACTCGGTTGTGTATGTATGTGATGTAGGCTGAGAACGATGCAGTTGGCCAAGAACTTCAAAAACAACTGGAAGCTGCAGGTAAGAGTTTGTTTTTCCCTTGCTTTCTTTCTGAAAGATAGTGGAAGCTGTTCTGATTAGGCTAAGGTCCAAATTTCCGTTTTCCTGTCTGTATTATTAATTTTTTGTTTATTCTGAGACTCAGTTTGCTGATTTTGGTGATTTAGAGAAGGAGCTAAAGCAGGTCCAGGAGTTGTTTAACCAAGCAACAGATAACTGCCTGAACTTGAAGAAGCCAGAATGAATAAGGTAGTAGATATTTCAGTTTGCTTGAGGAGCCCATTCTTGCTGGAATATACCCTGGAGGAACAACAAATTGATTGTGTCCATGTCTGTTATGGGTACATTTATTAACTAATTATAATTAGGCATGCTCTGACATTATTTTTTTTTTAAGTTCTTGGCCACTGCTGAAGAAAAGAATTCAGTATACTATTGTATCTGGTTTAGAGCTGTGTTTATAGAATGAAAAGAGGTAGGGATAATGTGCCTAAATAG</genome_strand>
        <mrna_strand>CAACACCTTTGGTACTCTTCAGAGGGACGCCCCTCCTGTGCGTCTATCACCTAATTATCCAGAACCTCCACCTGCTAATCCCACAGAAGACTCAGCTAATGTTGCAGAACAACCAAAGCAAATGAGTGCTGCTTTTGTTAAGGCTGCCAAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGATGTGTTGGTTGCTGCTCTTCCTTTATCGGATGGGAGTGAAGAAGCCCAATTGAAAAGAATTGCAGAACTCCAG............................................................................................................................................................................GCTGAGAACGATGCAGTTGGCCAAGAACTTCAAAAACAACTGGAAGCTGCAG..................................................................................................................................................AGAAGGAGCTAAAGCAGGTCCAGGAGTTGTTTAACCAAGCAACAGATAACTGCCTGAACTTGAAGAAGCCAGAATGAATAAGGTAGTAGATATTTCAGTTTGCTTGAGGAGCCCATTCTTGCTGGAATATACCCTGGAGGAACAACAAATTGATTGTGTCCATGTCTGTTATGGGTACATTTATTAACTAATTATAATTAGGCATGCTCTGACATTATTTTTTTTTTAAGTTCTTGGCCACTGCTGAAGAAAAGAATTCAGTATACTATTGTATCTGGTTTAGAGCTGTGTTTATAGAATGAAAAGAGGTAGGGATAATGTGCCTAAATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E261643" ref_strand="+" ref_description="SGN-E261643 	[cLEG-61-G19]">
      <seq>aacacctttggtactcttcagagggacgcccctcctgtgcgtctatcacctaattatccagaacctccacctgctaatcccacagaagactcagctaatgttgcagaacaaccaaagcaaatgagtgctgcttttgttaaggctgccaagcagcagttcgatgtgttggttgctgctcttcctttatcggatgggagtgaagaagcccaattgaaaagaattgcagaactccaggctgagaacgatgcagttggccaagaacttcaaaaacaactggaagctgcagagaaggagctaaagcaggtccaggagttgtttaaccaagcaacagataactgcctgaacttgaagaagccagaatgaataaggtagtagatatttcagtttgcttgaggagcccattcttgctggaatataccctggaggaacaacaaattgattgtgtccatgtctgttatgggtacatttattaactaattataattaggcatgctctgacattattttttttttaagttcttggccactgctgaagaaaagaattcagtatactattgtatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="124855" stop="122239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124555" g_stop="124403" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124402" i_stop="123267" i_length="1136">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="123266" g_stop="123186" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="234" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="123185" i_stop="123014" i_length="172">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="123013" g_stop="122962" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="286" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="122961" i_stop="122816" i_length="146">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122815" g_stop="122539" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="563" r_length="277" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E261643" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124555" e_stop="124403"/>
          <exon e_start="123266" e_stop="123186"/>
          <exon e_start="123013" e_stop="122962"/>
          <exon e_start="122815" e_stop="122539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACCTTTGGTACTCTTCAGAGGGACGCCCCTCCTGTGCGTCTATCACCTAATTATCCAGAACCTCCACCTGCTAATCCCACAGAAGACTCAGCTAATGTTGCAGAACAACCAAAGCAAATGAGTGCTGCTTTTGTTAAGGCTGCCAAGCAGGTGAAACTCCATACTCCATACCTTCACTTTTTCTGCTTATTCATCAACGAATATGAACAAGCCACAGACCAGGGTATAAAAGTAATCTGCGTGTACTTCGAGAATAGGGAATTTTCTCTTTTTTCGGAAGATCAAGATAAACTATTTAGTTTAGTTTCCTTTTTTGTGTAGACATTTTTTTTGTAAATGAGCCTGAATAAGTGATTGAACTTGTAGAATCCCTTTAAGAATAGGAAGGTATATCTTTGTGTTCCCTGTAAATGTTGTTGATTGCACCTTCTTGGTGCTGTATTACAAATGCACTTACCATTCCTTCAAAAAATCATTTTTGGACAAAATAATGTTTCTTTTGTCTTCTTTTGACTAGTATGTTTACTTTTGGAAACGTCAAATCTTTAGATATATGATGTGTTTGTGCAGTTCTATACAAGATAACACTAAGTTGTATCTTGGCTCATCATATCTAATGCGTACATGCAGTTCTATACCAGATGATATTAAGTCTTTGTTTGTTCAGACTTGAGACCTGCGTGGTTGAGTTCAAAGACCTTAGTCCTGATTCCTGAGACCAGTGTGGTTGAGTTCAAATACCTAGTCTTTTGTCCTTAGTTTAACGAGAAATACAATAATGCTATTAGCATCACCAACTACTTCAATAAAACTTGACTGAATCACATAATGGCGGACAAATTCCAACTACTAGCTGGACAGGATTGCATGCCTCTAGGGATTTTTACTAGAGAACTTGATGTCAGCCTCTCAGGTTTGGTAACCATGACATCTAGGCCAAGACTCACCGGGTAAACCTGGTGTCAAAACCGGAAAACTGAGTTCTAGTTTATCGCCCTTTAGCTGTCTTCTATGAAATGTATATGGACAACCCTGTGATTAGTTCTAAGGTGTTCAAGTTTACAGTTATGTTTCCCTTGTTTTCTTCTTGGCCTCACAATCAGAGGTTGTCTAATCTAGCATCCTATCAAACTTAAGCAGCACAGCCGACACTTGAGAGTAGCCTTGAGGATTGTGTGGCTCTAATTCAGACCAATTGCAAATTTTCATTGTGATCCTAAAGTGTATGCTTTGCTACAATGTCATTGTATTAAATCTATCTTCTCTTTTTCTTATCCTTCTTTGAGCAGTTCGATGTGTTGGTTGCTGCTCTTCCTTTATCGGATGGGAGTGAAGAAGCCCAATTGAAAAGAATTGCAGAACTCCAGGTATATGCTTCTTTGTGAATAATTGGTGGAATTCACTTTTTGACATCCTCTAATTCTGATGTGTTATAGCTTAACAGTATTTAAACTAAAAAAATAAAGAAGGATAAATAAAGATTAGTCTGTCTATTTTGGGCTTAGTAGTCTTACTCGGTTGTGTATGTATGTGATGTAGGCTGAGAACGATGCAGTTGGCCAAGAACTTCAAAAACAACTGGAAGCTGCAGGTAAGAGTTTGTTTTTCCCTTGCTTTCTTTCTGAAAGATAGTGGAAGCTGTTCTGATTAGGCTAAGGTCCAAATTTCCGTTTTCCTGTCTGTATTATTAATTTTTTGTTTATTCTGAGACTCAGTTTGCTGATTTTGGTGATTTAGAGAAGGAGCTAAAGCAGGTCCAGGAGTTGTTTAACCAAGCAACAGATAACTGCCTGAACTTGAAGAAGCCAGAATGAATAAGGTAGTAGATATTTCAGTTTGCTTGAGGAGCCCATTCTTGCTGGAATATACCCTGGAGGAACAACAAATTGATTGTGTCCATGTCTGTTATGGGTACATTTATTAACTAATTATAATTAGGCATGCTCTGACATTATTTTTTTTTTAAGTTCTTGGCCACTGCTGAAGAAAAGAATTCAGTATACTATTGTATCTG</genome_strand>
        <mrna_strand>AACACCTTTGGTACTCTTCAGAGGGACGCCCCTCCTGTGCGTCTATCACCTAATTATCCAGAACCTCCACCTGCTAATCCCACAGAAGACTCAGCTAATGTTGCAGAACAACCAAAGCAAATGAGTGCTGCTTTTGTTAAGGCTGCCAAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTTCGATGTGTTGGTTGCTGCTCTTCCTTTATCGGATGGGAGTGAAGAAGCCCAATTGAAAAGAATTGCAGAACTCCAG............................................................................................................................................................................GCTGAGAACGATGCAGTTGGCCAAGAACTTCAAAAACAACTGGAAGCTGCAG..................................................................................................................................................AGAAGGAGCTAAAGCAGGTCCAGGAGTTGTTTAACCAAGCAACAGATAACTGCCTGAACTTGAAGAAGCCAGAATGAATAAGGTAGTAGATATTTCAGTTTGCTTGAGGAGCCCATTCTTGCTGGAATATACCCTGGAGGAACAACAAATTGATTGTGTCCATGTCTGTTATGGGTACATTTATTAACTAATTATAATTAGGCATGCTCTGACATTATTTTTTTTTTAAGTTCTTGGCCACTGCTGAAGAAAAGAATTCAGTATACTATTGTATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E205335" ref_strand="+" ref_description="SGN-E205335 	[cLEC-25-J19]">
      <seq>gcaccttcatatgatacaaatcagttacatgctgctgtggtggaattgtattgccatgaaggtgcagagattaagtactcaaccgtgcagaattggtacgctggagatgaggaagggagaggagggatttataatttcgttacaaagagaggaatatgtgctggggctagatcgaagatatcatggacacaagttgagactggctcagctattacctggaagtatccaagtgttgtattagagggtgatgaatcagttggtgaattctattctgtggcattgaccaacaactatcagcaggcagatacaggaacaaagatggtacacaaagggaagaatacgaggagtaggattatttcaaagggtatttctgcaggaaattctagaaattgttacagaggactagttcaggtcttatcaagtgcagagaatgctcggaattcctcccagtgtgattcaatgctcatcggtgataaagctgcagccaacacttatccatatattcaggcgaagaacccctctgcccggatagaacatgaagcaacaacttcaaagattggtgaagatcagttgttctactttcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="126167" stop="130154"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126467" g_stop="126973" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="507" r_length="507" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126974" i_stop="129775" i_length="2802">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129776" g_stop="129854" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="586" r_length="79" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E205335" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126467" e_stop="126973"/>
          <exon e_start="129776" e_stop="129854"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACCTTCATATGATACAAATCAGTTACATGCTGCTGTGGTGGAATTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGAGATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATATGTGCTGGGGCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTATCCAAGTGTTGTATTAGAGGGTGATGAATCAGTTGGTGAATTCTATTCTGTGGCATTGACCAACAACTATCAGCAGGCAGATACAGGAACAAAGATGGTACACAAAGGGAAGAATACGAGGAGTAGGATTATTTCAAAGGGTATTTCTGCAGGAAATTCTAGAAATTGTTACAGAGGACTAGTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTCATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAGGTTAGTAGCTCTCTGTGAATTTTAATTTTGCTTTCTGTCTCCGCATGATAAAATAATTATTGATGTAACTTTAGCTCTCTACTTATAGAAGTATAATAATTAGTTTTGACTTATGGCCTTATTACTCTTTAGGTGGAAAACATGATCTTTCTGTGATCACAGTGTACTTCACTGTATTCTGTGGTCTCTTGATTTATGCATGATGCTGTTGTCATTAAGTTCCAATCTTTCATATAAAATTTAGTTACCTGATCAAAGAAAAAATCATTAAGTTCCAATCTTTGAAGAAAAATTTATTTACCTGATCAAAGAAAAAATCATTAAGTTCCAATCTTTGATGAAAATTTTATTTACCTGATCAAAAAAGGAAAAGGGAAAATGCATAAGTACCTCCTAGACTATGACCGAAACCCCAGAGACACACCTTAACTAAACTAAGGTCCTATTGTCCCCTGAACTTATTTTTTTGTAATTTTGTGCACTTTTTTGGCTTACGTGGCATCCAAATATCTCCCATGCGCCTCAACTGCGTGGAGTCACGAAGTGTGCCACGTAAGACAAAAGGTGCACAAAATTACAAAAAAAAAAATGTTCAGGGGTAATAGGATCTTAGTTTAGTTAAGGTTTGTCTCTGAAATTTCGGTCATACTCTAGGGTACTTGTGCATTTTCCCTCATTAAGTTCCATTTACCTTTCTCATAGTACAGGAGCAATGATTTTAGTCTACCACTAACCACCCTATCTATCAGAACATTATGGAGTGAATTCAAAACCAAAATTAAGATTAAAGTTGCAAACGGGGCTAAAACTGATTTTTGGAAAGATGAATGGCATGAGTCAGGAAGACTGGAAAATTTGTTCCCAGATATTCATGCATTAGTCTCTCACCAACAAAAGACTATTGTAGAATTTTGGACACCCCATGGATGGAGATTCAACTTTAGAAGGCATCTAAATGACTGGGAGATCCAAAGAGTTGCAGATTTCTTAAATACCATCGAACAATTCAATGGACTGGAGGTAGGTCAATATACCTTATGATGGAAAGATAATAAGAAGGTCCAGTTCAAAGTAAGTAACGCTTAGAGGTGGATGAATCAAACACCTCAATGCATAAGCAACTGGCCATGGAAAAACAAAATTCCACACAAAGTGGCCTGCTTTATCTGGTTGCTAGCCAAGGAAGCAACTTTCACCCAAGACAGAGGAGAGGATTACCACTTTGTCCTAGGTGTTTTTTTTGTGGGGAAAAGGCTGAGACAGTTAATCATCTATTTCTTCATTGCAAAGTCACTGGACAGCTATGGATGATTTTCTTAAGTCTCAAAGGCATCTCATGGGCTATGCCTGGAAAGATTACTGAAGCAATTCAGAGCTGAGAGGAAGCTGGTGTGCAAGCAAAAAACAGAGATAGATGGAAAATTGTCCTGCTTGTATCTGGTGGACAATTTGGAAGGAAAGGAATGCTAGATGTTTTGATATCATAGAGAATAGTATGCAAAAGATTAAGTTAAACTGCTTTTGTTACTACGTTTTTGGTGTAATCAAATATACTCAAATGGCATTATCTCCATAATTGATGTTCCAGATTCAATTTAGGTAGGAGTTAGCAGGATTTGAAGAAAAATTTGTATATATGGTTTTCAGTACAACCTATGTACTGTTTGTGAGAACTATACGAAGTTACCTGTTCAAAAAAAAAAAAAAACACCCTATCCAAGAGCTCCCCTATTCCAATTGCAGAAAAGGAAAAGGAAGAAGAAAGAAGGATTTCATCTTGAATCAGAATCATTCGACAAGAGCTTAGCAAAAAAGGTTCAACAAAATGTACATAGTTCCTTCTAAAACAAGTCAATTAGGTCCCCATGCTAGGACCTTCGGCTTGGAAATATTCGAGCTGTCCGGCAGGTCTATAAATAGTCTCTCTTTCATTGGCGTCTGAGAATGTTCTCATGTAGACCACAAAACTAGTGGTTTGTCTGTTACTCATGGTGAATCGAAAATGAAAATAGAGGAGGGGTAAAGGGTACTGCTTACTTTCATTTGAAGTTCATTGTCATGAGAAGATGTCCATAGATCATGTGTTGGATGAAAAGCATTAACTTGTATCCCTGTGCATGACAGTGTGTGATTATTCTGGAGTTGACTAAGCCTCCGTTGCCGAAAACTAGTGTGTACTTGTGCACGGAGAAGGTGCAAATAGTAATTGTTATGGATGCGTTGTATGTTTTGAACTAGCAGCAAACTGCATGTCCGTCTGTTTGATTAACTTATCGTTATGCTTGGTCCAGAACTCCAGATGAAGTACATTTACTAATAAATATAGTTTAAATCAGTGGCCTTTGATAATCATCTTAAATTTTGTTAACTCGAGGAAACTTAACCTTTAATTTAATTTGGCATGTGATAGTTTTCTAGTAAAATGCCACAAAAAACACGCTCCCATCTTTGCGAATTGTTGGAGAAACTAATGCAAACTGCAAACTAATTTAAAAGCAGTCTACAGTCTCTAAATATTCTTAATTGGATTTACCCGATAAATCCTTCTATATTTTAAGATCTCTCAGAAAGCATCTGTAGTATCTATATAGAAATAGATTAGTGCATAGGGGTCAAAGAAGACAACATTTGTTTCTTTTGGTGTGGCTTTTAAGTTCTAAGTCAGATGCTACATGAATTTTGTAGTTATCTTGGTAGCTGCTTGTGTAAATATAACTCTTGTTCTACTTGGAACTTGGAATCTAATGTAACTGCGTTTTTGCTCTTCTGTTTCTATATTTACATATGGCATCATTTTAACAGGCGAAGAACCCCTCTGCCCGGATAGAACATGAAGCAACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTTCAGC</genome_strand>
        <mrna_strand>GCACCTTCATATGATACAAATCAGTTACATGCTGCTGTGGTGGAATTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGAGATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATATGTGCTGGGGCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTATCCAAGTGTTGTATTAGAGGGTGATGAATCAGTTGGTGAATTCTATTCTGTGGCATTGACCAACAACTATCAGCAGGCAGATACAGGAACAAAGATGGTACACAAAGGGAAGAATACGAGGAGTAGGATTATTTCAAAGGGTATTTCTGCAGGAAATTCTAGAAATTGTTACAGAGGACTAGTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTCATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGAACCCCTCTGCCCGGATAGAACATGAAGCAACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E551285" ref_strand="+" ref_description="SGN-E551285 	[TUS-50-F19]">
      <seq>caccttcatatgatacaaatcagttacatgctgctgtggtggaattgtattgccatgaaggtgcagagattaagtactcaaccgtgcagaattggtacgctggagatgaggaagggagaggagggatttataatttcgttacaaagagaggaatatgtgctggggctagatcgaagatatcatggacacaagttgagactggctcagctattacctggaagtatccaagtgttgtattagagggtgatgaatcagttggtgaattctattctgtggcattgaccaacaactatcagcaggcagatacaggaacaaagatggtacacaaagggaagaatacgaggagtaggattatttcaaagggtatttctgcaggaaattctagaaattgttacagaggactagttcaggtcttatcaagtgcagagaatgctcggaattcctcccagtgtgattcaatgctcatcggtgataaagctgcagccaacacttatccatatattcaggcgaagaacccctctgcccggatagaacatgaagcaacaacttcaaagattggtgaagatcagttgttctactttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="126168" stop="130152"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126468" g_stop="126973" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126974" i_stop="129775" i_length="2802">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129776" g_stop="129852" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="583" r_length="77" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E551285" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E551285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126468" e_stop="126973"/>
          <exon e_start="129776" e_stop="129852"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTTCATATGATACAAATCAGTTACATGCTGCTGTGGTGGAATTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGAGATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATATGTGCTGGGGCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTATCCAAGTGTTGTATTAGAGGGTGATGAATCAGTTGGTGAATTCTATTCTGTGGCATTGACCAACAACTATCAGCAGGCAGATACAGGAACAAAGATGGTACACAAAGGGAAGAATACGAGGAGTAGGATTATTTCAAAGGGTATTTCTGCAGGAAATTCTAGAAATTGTTACAGAGGACTAGTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTCATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAGGTTAGTAGCTCTCTGTGAATTTTAATTTTGCTTTCTGTCTCCGCATGATAAAATAATTATTGATGTAACTTTAGCTCTCTACTTATAGAAGTATAATAATTAGTTTTGACTTATGGCCTTATTACTCTTTAGGTGGAAAACATGATCTTTCTGTGATCACAGTGTACTTCACTGTATTCTGTGGTCTCTTGATTTATGCATGATGCTGTTGTCATTAAGTTCCAATCTTTCATATAAAATTTAGTTACCTGATCAAAGAAAAAATCATTAAGTTCCAATCTTTGAAGAAAAATTTATTTACCTGATCAAAGAAAAAATCATTAAGTTCCAATCTTTGATGAAAATTTTATTTACCTGATCAAAAAAGGAAAAGGGAAAATGCATAAGTACCTCCTAGACTATGACCGAAACCCCAGAGACACACCTTAACTAAACTAAGGTCCTATTGTCCCCTGAACTTATTTTTTTGTAATTTTGTGCACTTTTTTGGCTTACGTGGCATCCAAATATCTCCCATGCGCCTCAACTGCGTGGAGTCACGAAGTGTGCCACGTAAGACAAAAGGTGCACAAAATTACAAAAAAAAAAATGTTCAGGGGTAATAGGATCTTAGTTTAGTTAAGGTTTGTCTCTGAAATTTCGGTCATACTCTAGGGTACTTGTGCATTTTCCCTCATTAAGTTCCATTTACCTTTCTCATAGTACAGGAGCAATGATTTTAGTCTACCACTAACCACCCTATCTATCAGAACATTATGGAGTGAATTCAAAACCAAAATTAAGATTAAAGTTGCAAACGGGGCTAAAACTGATTTTTGGAAAGATGAATGGCATGAGTCAGGAAGACTGGAAAATTTGTTCCCAGATATTCATGCATTAGTCTCTCACCAACAAAAGACTATTGTAGAATTTTGGACACCCCATGGATGGAGATTCAACTTTAGAAGGCATCTAAATGACTGGGAGATCCAAAGAGTTGCAGATTTCTTAAATACCATCGAACAATTCAATGGACTGGAGGTAGGTCAATATACCTTATGATGGAAAGATAATAAGAAGGTCCAGTTCAAAGTAAGTAACGCTTAGAGGTGGATGAATCAAACACCTCAATGCATAAGCAACTGGCCATGGAAAAACAAAATTCCACACAAAGTGGCCTGCTTTATCTGGTTGCTAGCCAAGGAAGCAACTTTCACCCAAGACAGAGGAGAGGATTACCACTTTGTCCTAGGTGTTTTTTTTGTGGGGAAAAGGCTGAGACAGTTAATCATCTATTTCTTCATTGCAAAGTCACTGGACAGCTATGGATGATTTTCTTAAGTCTCAAAGGCATCTCATGGGCTATGCCTGGAAAGATTACTGAAGCAATTCAGAGCTGAGAGGAAGCTGGTGTGCAAGCAAAAAACAGAGATAGATGGAAAATTGTCCTGCTTGTATCTGGTGGACAATTTGGAAGGAAAGGAATGCTAGATGTTTTGATATCATAGAGAATAGTATGCAAAAGATTAAGTTAAACTGCTTTTGTTACTACGTTTTTGGTGTAATCAAATATACTCAAATGGCATTATCTCCATAATTGATGTTCCAGATTCAATTTAGGTAGGAGTTAGCAGGATTTGAAGAAAAATTTGTATATATGGTTTTCAGTACAACCTATGTACTGTTTGTGAGAACTATACGAAGTTACCTGTTCAAAAAAAAAAAAAAACACCCTATCCAAGAGCTCCCCTATTCCAATTGCAGAAAAGGAAAAGGAAGAAGAAAGAAGGATTTCATCTTGAATCAGAATCATTCGACAAGAGCTTAGCAAAAAAGGTTCAACAAAATGTACATAGTTCCTTCTAAAACAAGTCAATTAGGTCCCCATGCTAGGACCTTCGGCTTGGAAATATTCGAGCTGTCCGGCAGGTCTATAAATAGTCTCTCTTTCATTGGCGTCTGAGAATGTTCTCATGTAGACCACAAAACTAGTGGTTTGTCTGTTACTCATGGTGAATCGAAAATGAAAATAGAGGAGGGGTAAAGGGTACTGCTTACTTTCATTTGAAGTTCATTGTCATGAGAAGATGTCCATAGATCATGTGTTGGATGAAAAGCATTAACTTGTATCCCTGTGCATGACAGTGTGTGATTATTCTGGAGTTGACTAAGCCTCCGTTGCCGAAAACTAGTGTGTACTTGTGCACGGAGAAGGTGCAAATAGTAATTGTTATGGATGCGTTGTATGTTTTGAACTAGCAGCAAACTGCATGTCCGTCTGTTTGATTAACTTATCGTTATGCTTGGTCCAGAACTCCAGATGAAGTACATTTACTAATAAATATAGTTTAAATCAGTGGCCTTTGATAATCATCTTAAATTTTGTTAACTCGAGGAAACTTAACCTTTAATTTAATTTGGCATGTGATAGTTTTCTAGTAAAATGCCACAAAAAACACGCTCCCATCTTTGCGAATTGTTGGAGAAACTAATGCAAACTGCAAACTAATTTAAAAGCAGTCTACAGTCTCTAAATATTCTTAATTGGATTTACCCGATAAATCCTTCTATATTTTAAGATCTCTCAGAAAGCATCTGTAGTATCTATATAGAAATAGATTAGTGCATAGGGGTCAAAGAAGACAACATTTGTTTCTTTTGGTGTGGCTTTTAAGTTCTAAGTCAGATGCTACATGAATTTTGTAGTTATCTTGGTAGCTGCTTGTGTAAATATAACTCTTGTTCTACTTGGAACTTGGAATCTAATGTAACTGCGTTTTTGCTCTTCTGTTTCTATATTTACATATGGCATCATTTTAACAGGCGAAGAACCCCTCTGCCCGGATAGAACATGAAGCAACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTTCA</genome_strand>
        <mrna_strand>CACCTTCATATGATACAAATCAGTTACATGCTGCTGTGGTGGAATTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGAGATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATATGTGCTGGGGCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTATCCAAGTGTTGTATTAGAGGGTGATGAATCAGTTGGTGAATTCTATTCTGTGGCATTGACCAACAACTATCAGCAGGCAGATACAGGAACAAAGATGGTACACAAAGGGAAGAATACGAGGAGTAGGATTATTTCAAAGGGTATTTCTGCAGGAAATTCTAGAAATTGTTACAGAGGACTAGTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTCATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGAACCCCTCTGCCCGGATAGAACATGAAGCAACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E459526" ref_strand="+" ref_description="SGN-E459526 	[cPRO-28-I23]">
      <seq>caccttcgtatgatactaatcagttacatgctgctgtggtggagttgtattgccatgaaggtgcggagattaagtattccactgtgcagaattggtatgcaggagatgaggaaggtgtaggagggatttataattttgttacaaagaggggaatttgtgctggggctaggtcgaagatttcgtggacacaagtggagacaggatcagctattacctggaagtatccgagtgttgtgttagaaggtgatgaatcagttggtgagttctattccgtggcngtaaccaataattatcagcaggcagatacagggacaaagatgatacacaaaggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="126168" stop="127100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126468" g_stop="126800" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="333" r_length="333" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E459526" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126468" e_stop="126800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTTCATATGATACAAATCAGTTACATGCTGCTGTGGTGGAATTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGAGATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATATGTGCTGGGGCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTATCCAAGTGTTGTATTAGAGGGTGATGAATCAGTTGGTGAATTCTATTCTGTGGCATTGACCAACAACTATCAGCAGGCAGATACAGGAACAAAGATGGTACACAAAGGGA</genome_strand>
        <mrna_strand>CACCTTCGTATGATACTAATCAGTTACATGCTGCTGTGGTGGAGTTGTATTGCCATGAAGGTGCGGAGATTAAGTATTCCACTGTGCAGAATTGGTATGCAGGAGATGAGGAAGGTGTAGGAGGGATTTATAATTTTGTTACAAAGAGGGGAATTTGTGCTGGGGCTAGGTCGAAGATTTCGTGGACACAAGTGGAGACAGGATCAGCTATTACCTGGAAGTATCCGAGTGTTGTGTTAGAAGGTGATGAATCAGTTGGTGAGTTCTATTCCGTGGCNGTAACCAATAATTATCAGCAGGCAGATACAGGGACAAAGATGATACACAAAGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E619488" ref_strand="+" ref_description="SGN-E619488 	[70178]">
      <seq>caaagggtatttctgcaggaaattctagaaactgttacagaggactagttcaggtcttatcaagtgcagagaatgctcggaattcctcccagtgtgattcaatgctcatcggtgataaagctgcagccaacacttatccatatattcaggccaagaacccctctgctcagatagaacatgaagccacaacttcaaagattggtgaagatcagttgttctacttccagcagagaggaatcgactatgagaaagcaatggctgcaatgatctctgggttttgcagagatgttttcaatgaactccctgatgaatttggcgctgaggtgaaccaattaatgagcttgaagcttgaagggtctgtaggttaatcaaagctgattgctggtgtggaaattttggactttgtagccatttgttttgtcatctgtaaagttgtaatagtatcatacccaaacaaacttttgctatttacaccatgtaaattaatcatgtgtcaaggcattgtcttctaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="126525" stop="130440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126825" g_stop="126973" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126974" i_stop="129775" i_length="2802">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129776" g_stop="130140" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="512" r_length="363" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="513" polyA_stop="523"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E619488" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E619488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126825" e_stop="126973"/>
          <exon e_start="129776" e_stop="130140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGGGTATTTCTGCAGGAAATTCTAGAAATTGTTACAGAGGACTAGTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTCATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAGGTTAGTAGCTCTCTGTGAATTTTAATTTTGCTTTCTGTCTCCGCATGATAAAATAATTATTGATGTAACTTTAGCTCTCTACTTATAGAAGTATAATAATTAGTTTTGACTTATGGCCTTATTACTCTTTAGGTGGAAAACATGATCTTTCTGTGATCACAGTGTACTTCACTGTATTCTGTGGTCTCTTGATTTATGCATGATGCTGTTGTCATTAAGTTCCAATCTTTCATATAAAATTTAGTTACCTGATCAAAGAAAAAATCATTAAGTTCCAATCTTTGAAGAAAAATTTATTTACCTGATCAAAGAAAAAATCATTAAGTTCCAATCTTTGATGAAAATTTTATTTACCTGATCAAAAAAGGAAAAGGGAAAATGCATAAGTACCTCCTAGACTATGACCGAAACCCCAGAGACACACCTTAACTAAACTAAGGTCCTATTGTCCCCTGAACTTATTTTTTTGTAATTTTGTGCACTTTTTTGGCTTACGTGGCATCCAAATATCTCCCATGCGCCTCAACTGCGTGGAGTCACGAAGTGTGCCACGTAAGACAAAAGGTGCACAAAATTACAAAAAAAAAAATGTTCAGGGGTAATAGGATCTTAGTTTAGTTAAGGTTTGTCTCTGAAATTTCGGTCATACTCTAGGGTACTTGTGCATTTTCCCTCATTAAGTTCCATTTACCTTTCTCATAGTACAGGAGCAATGATTTTAGTCTACCACTAACCACCCTATCTATCAGAACATTATGGAGTGAATTCAAAACCAAAATTAAGATTAAAGTTGCAAACGGGGCTAAAACTGATTTTTGGAAAGATGAATGGCATGAGTCAGGAAGACTGGAAAATTTGTTCCCAGATATTCATGCATTAGTCTCTCACCAACAAAAGACTATTGTAGAATTTTGGACACCCCATGGATGGAGATTCAACTTTAGAAGGCATCTAAATGACTGGGAGATCCAAAGAGTTGCAGATTTCTTAAATACCATCGAACAATTCAATGGACTGGAGGTAGGTCAATATACCTTATGATGGAAAGATAATAAGAAGGTCCAGTTCAAAGTAAGTAACGCTTAGAGGTGGATGAATCAAACACCTCAATGCATAAGCAACTGGCCATGGAAAAACAAAATTCCACACAAAGTGGCCTGCTTTATCTGGTTGCTAGCCAAGGAAGCAACTTTCACCCAAGACAGAGGAGAGGATTACCACTTTGTCCTAGGTGTTTTTTTTGTGGGGAAAAGGCTGAGACAGTTAATCATCTATTTCTTCATTGCAAAGTCACTGGACAGCTATGGATGATTTTCTTAAGTCTCAAAGGCATCTCATGGGCTATGCCTGGAAAGATTACTGAAGCAATTCAGAGCTGAGAGGAAGCTGGTGTGCAAGCAAAAAACAGAGATAGATGGAAAATTGTCCTGCTTGTATCTGGTGGACAATTTGGAAGGAAAGGAATGCTAGATGTTTTGATATCATAGAGAATAGTATGCAAAAGATTAAGTTAAACTGCTTTTGTTACTACGTTTTTGGTGTAATCAAATATACTCAAATGGCATTATCTCCATAATTGATGTTCCAGATTCAATTTAGGTAGGAGTTAGCAGGATTTGAAGAAAAATTTGTATATATGGTTTTCAGTACAACCTATGTACTGTTTGTGAGAACTATACGAAGTTACCTGTTCAAAAAAAAAAAAAAACACCCTATCCAAGAGCTCCCCTATTCCAATTGCAGAAAAGGAAAAGGAAGAAGAAAGAAGGATTTCATCTTGAATCAGAATCATTCGACAAGAGCTTAGCAAAAAAGGTTCAACAAAATGTACATAGTTCCTTCTAAAACAAGTCAATTAGGTCCCCATGCTAGGACCTTCGGCTTGGAAATATTCGAGCTGTCCGGCAGGTCTATAAATAGTCTCTCTTTCATTGGCGTCTGAGAATGTTCTCATGTAGACCACAAAACTAGTGGTTTGTCTGTTACTCATGGTGAATCGAAAATGAAAATAGAGGAGGGGTAAAGGGTACTGCTTACTTTCATTTGAAGTTCATTGTCATGAGAAGATGTCCATAGATCATGTGTTGGATGAAAAGCATTAACTTGTATCCCTGTGCATGACAGTGTGTGATTATTCTGGAGTTGACTAAGCCTCCGTTGCCGAAAACTAGTGTGTACTTGTGCACGGAGAAGGTGCAAATAGTAATTGTTATGGATGCGTTGTATGTTTTGAACTAGCAGCAAACTGCATGTCCGTCTGTTTGATTAACTTATCGTTATGCTTGGTCCAGAACTCCAGATGAAGTACATTTACTAATAAATATAGTTTAAATCAGTGGCCTTTGATAATCATCTTAAATTTTGTTAACTCGAGGAAACTTAACCTTTAATTTAATTTGGCATGTGATAGTTTTCTAGTAAAATGCCACAAAAAACACGCTCCCATCTTTGCGAATTGTTGGAGAAACTAATGCAAACTGCAAACTAATTTAAAAGCAGTCTACAGTCTCTAAATATTCTTAATTGGATTTACCCGATAAATCCTTCTATATTTTAAGATCTCTCAGAAAGCATCTGTAGTATCTATATAGAAATAGATTAGTGCATAGGGGTCAAAGAAGACAACATTTGTTTCTTTTGGTGTGGCTTTTAAGTTCTAAGTCAGATGCTACATGAATTTTGTAGTTATCTTGGTAGCTGCTTGTGTAAATATAACTCTTGTTCTACTTGGAACTTGGAATCTAATGTAACTGCGTTTTTGCTCTTCTGTTTCTATATTTACATATGGCATCATTTTAACAGGCGAAGAACCCCTCTGCCCGGATAGAACATGAAGCAACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTTCAGCAGAGAGGAATCGACTATGAGAAAGCAATGGCTGCAATGATCTCTGGGTTTTGCAGAGATGTTTTCAATGAACTCCCTGATGAATTTGGTGCTGAGGTGAACCAATTAATGAGCTTGAAGCTTGAAGGTTCTGTAGGTTAAACAAAGCTGATAGATGCTGTGGAAAATGTGGACTTTTTAGCCATTTCTTTTGTCATCTGTAAAGTTGTAATAGTATCATACGCAAACAAACTTTTGCTATTTACACTTCATGTAAATAAATAATATGTCAAGGCATTGTCTTCTAA</genome_strand>
        <mrna_strand>CAAAGGGTATTTCTGCAGGAAATTCTAGAAACTGTTACAGAGGACTAGTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTCATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAACCCCTCTGCTCAGATAGAACATGAAGCCACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTCCAGCAGAGAGGAATCGACTATGAGAAAGCAATGGCTGCAATGATCTCTGGGTTTTGCAGAGATGTTTTCAATGAACTCCCTGATGAATTTGGCGCTGAGGTGAACCAATTAATGAGCTTGAAGCTTGAAGGGTCTGTAGGTTAATCAAAGCTGATTGCTGGTGTGGAAATTTTGGACTTTGTAGCCATTTGTTTTGTCATCTGTAAAGTTGTAATAGTATCATACCCAAACAAACTTTTGCTATTTACAC--CATGTAAATTAATCATGTGTCAAGGCATTGTCTTCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E577636" ref_strand="+" ref_description="SGN-E577636 	[LE15BB02]">
      <seq>gctttacttgattctggtttgactgctgaaaggattcatactcttgagcttgtaggatcaggttctcgaattccagctatgggaagaattttaaattctgttttcagaaaagaaccggggaggacaataaatgctagtgagtgtgttgcacgtggatgtgctcttcaatgtgcgatgctcagccccatatttcgtgttagagagtacgagattcaggattcgtttcctttctccattgggtttgcatctgatgagggcccagtttgcaccctatcaaatggcgtattgtttccaaagggccatagttttccgagcatgaaagtgctcacattgcaaaggagcaacagtttccacttggaagcattctacactaaccagaatgagttgccacctggtgtatccgataaaataagcaaatatacgcttggcccattccaggttcctcattctgaaaaagcaaaggtcaaagtcaaaattcaattaaacctccatggtgttgttacagtagaatcggcttggctgatcaaagatcaatcaagtcattctacgtcggaaaataatattgatacttatgcagaaaatatggagggagatgatacaaggaaaagtaaggccgttaagagacaggatattcctgtcagtggaagtgttgatggtggaatgaccctcatggagctatcccaagctaaggaaaaggaacgccagttaacggagcaagacataaaggtggagcgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="146073" stop="154917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146373" g_stop="146582" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146583" i_stop="148143" i_length="1561">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="148144" g_stop="148356" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="423" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="148357" i_stop="151251" i_length="2895">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="151252" g_stop="151347" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="519" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="151348" i_stop="151463" i_length="116">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="151464" g_stop="151532" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="588" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="151533" i_stop="154469" i_length="2937">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="154470" g_stop="154617" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="736" r_length="148" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E577636" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146373" e_stop="146582"/>
          <exon e_start="148144" e_stop="148356"/>
          <exon e_start="151252" e_stop="151347"/>
          <exon e_start="151464" e_stop="151532"/>
          <exon e_start="154470" e_stop="154617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTACTTGATTCTGGTTTGACTGCTGAAAGGATTCATACTCTTGAGCTTGTAGGATCAGGTTCTCGAATTCCAGCTATGGGAAGAATTTTAAATTCTGTTTTCAGAAAAGAACCGGGGAGGACAATAAATGCTAGTGAGTGTGTTGCACGTGGATGTGCTCTTCAATGTGCGATGCTCAGCCCCATATTTCGTGTTAGAGAGTACGAGGTTTGTGATGTGAACTATTACAGTAATACTTGTGATCAATATGGCTGAGTTTCTTTCTATTTCTTAGTCGCATTTTCATTTCTTAGTCCCATTTTCATTTAATTGGCCTAAATTAGATTCAAAGTCCAATATGGATAGGTTTATCCCTCTTCTATGGGGTATTTAGTTTTAGTGACCCGAGATACAAGACCTTCTATGCTCTCATTGGCTGGTTTTACTTTACTTTCTCAATTATGGTGAATATGGTTGTGATGTTAGATGAGTCAAGTTTTCCTTCTCTTTGTTTTTCAATTTACTTCTCTTTCTATCGGGAGTTTGAAGTTCTATGATGTAAAAACTCTATTTGTAGAAACGATCTCTTCTATGGCTATAGAACATTCTAGAATATTCGCTGCTGAAATAGTATTCCTGCAGTTAATTGAACAAATATTAGAAAAACAACCTCGAGTAATGAGTGAAAACATGATTAAATGAAAAATTCATTAGACTAGAAAGACCATGGAGAAATTAAGTGACTTTGCTATCGAAATGGACACTCTAGCAGATGCAGATCATGATGCTGATAAACTACTTCAGAAGACATGAAGCATTGCATAATTCTTTGGACTTCAAAGACCATGGAGAAATTAAGAAACTTTTCTATTGTAATGACCACTCCACCAGATCATGAGGCTAATACACTACTTCAGAAAGCCTAAATGTTACTCCGGGGAGCAACATAGTTGGGTGTTAAAAGACGCATAAAATCAAAAGAAATAATTCATTGAGTTATGAGAACCATACATGTTAATAATTGATAAACCAGAGTTGCAATATTCATCGAGGCAGAGAGCATTCTAGAGAGATTAAATTGAATGAAATGAGGACATGACCTAGCAAATTTGTTGACTTAGTCATTCTTTCGGAGTTGGAGCCAGGCAGGGTGACTGCAGATGTCTTTGAAAAGTAAAAATGAGTAGCTAGATCAACCATATGAGCGGTTCCTGTTGATATCGAAATAATAGACTACACTCTTTACTATGTGTTACCACCTTTTACTTCACTACAGTCATTCTGTTGCTAATTTTAGTGTTTCTTTCTTGTAATAAACTAGAAGTACATTTGAAAGAAGTACAAAGAGGTCTTTTTGGGTAGGGGCAAGGCTGTTCATGTTGCTGTTGTTGTACAAAAATGAGAAAGAATTATTGCGCGTTGGGATAGCTTACTACATCTGTGTCAAAATTATGCCTTTTACAGTTTTACTGCTTAAATAGTTGTCATGCATAGGTACCCAAAGCTTAAAATTCATCTCACAACCACTAGCTTGAAAAGAAACAATACAAAACAATGTTCTTGTGAGCTACTGATCTATTCTTGTAAAGCTTGCATCTTCTTGATACCTTTAAATTAATCTACTTCATTTAAAAAAAAATACAAAGCAATATCCAGAGGATAATAGGAACAAAACATAAGTGTACCAAGTCCTAACTCCGGCATGAACATTGTTTAGTGCATGGCGTTTTATTGAGGTATAGTTGTTGGTTTCATCATTATTTTGAGTTCGGAAATCTTTTATTTACAGATTCAGGATTCGTTTCCTTTCTCCATTGGGTTTGCATCTGATGAGGGCCCAGTTTGCACCCTATCAAATGGCGTATTGTTTCCAAAGGGCCATAGTTTTCCGAGCATGAAAGTGCTCACATTGCAAAGGAGCAACAGTTTCCACTTGGAAGCATTCTACACTAACCAGAATGAGTTGCCACCTGGTGTATCCGATAAAATAAGCAAATATACGGTACAGTGCATTTTTCCCTGATAACTAATATGAGAACTTCTATCCTCTAGTTTTGTTTGAGATTTCTAGATGTATTATATAACATTTGATCTAATTTTCTTGATTATGTTCGGAATGATTCTCGATAATTGGATTACTCTAATCTAGTCATAGCTAAAGTTCTAGTTGTTGAGGTTACAACTTAAGATCTCTATGCATTTGATTTTTTCAAAGCCCATTGAACCACCTTTGAGAACTTACTACAGCAGACAATTGTATCATTTGTCACATATTTGTTCTTCTAACCCAAATTAGTTGTCCACTTCCCTTTTTGGTTTGTTTCCAGTAATTTATCCCTTGAAAGAGAAGTTCTTATCTTGATGGATATCTCAATATGTCTGTATATCATATTCCCGAAAAGGTAAGTAGACATCAAAAGAGAAAGAAAAATTCAATAAGTCAACTATGTCTACAGGGAGTATTAGATATTGTACTATTTCATTGTATGTTTAAATAGCTACATGCACTACCCAGTAGCTTTGCATATTTTATGTCGCAATATCTTGGTGATCTTCTCTATTGAATGAGCCCGCTTGAGAAGGTCCTCACTGAACCACTCCCAGAAGCAGTTTTACCTTCCAACATACAACAACATACCCAGTGTAATCTCACAAGTGGGTCTGGGGAGGGTAATGTGTACTTGGGAGGGTGATGTGTACACAAATTGTTTCTGGTAGACTTTTGCCGTCCAATGTGAGCCCTATAAATAAGGCAAAAAAAATTGAACGTAATATCTCTGCTATATTTGGACAATCTAGGGTATAAAACTGAACCACATGTGTTCATAGCTAATGTACATCAGCCAATTTTGTGATTCAAGATTTTCAAAACTAGACATTGCCGGTGCACACTATGTAAACCTTTGATCCGTTGTACAGTTTGGACTGCTACTTCAGTCTCTTGCATTGCAGATTAGCTACAGAGTCGACGATAATTTGCTGGGTTTCAATTTCTCCGGTTTACTTGAAAGGAACTTTCATATCTGCTGTTATTACCTAAATTAGCATCATGCATGAGAAGGTAAAGAAAAAAGGGATGTCATTGGTACGAACGAAATGTAGTTTTGATAAGCTTTATTGTGACTGAATATATGCAGCTGTGATGATTTATCATTAAACGAGAAAAAAATTATCTTCTGATATTTTGGAGGATTAAGTTCTGGTAGTACATTCACTTTTCTAATAGGTAGAATAATATATAGTTGCTCAAATACCAGAAAATGTTGTATCATGATTTGTTATGCAAACAAACATACGTGTACATCTGTCCACGAATGACTTTGTCTCCCAGAAAAAAACACATTTAGGTGGTTTCTGTGACATTAAAGAAAGTGCAGTAAATTGGAAATCATAATTTTGATGGAATATTGTGAGCAGTGTTTAAATTAACATGGTATTGAGGGATGATGCAAAAAGATGTATTGGTGTTAATTATAGCAGTGATGCAACTTCCTTATTTTCTTAAATATTTGGCTATCATAAGTTTCACTATAAACTCTTTGACCATGAGCGTTATTGGTTTAGTACTGTCAAATGTTGTACTTATCCTATAATTAAAACATGTTCTCAAGGCCTATTGTTCTGCCCTTGCAATTTCATGGGCTCACAATGAAAACTTGTGAAACACCCTTTTCTGCTAAAATGTTCATAAAATTTATTACTGTACATTATAAAATGTGATGAAGTTGCGAAACACCCTTTTTGGTTGCCCTTCTATACTGTTTCAAATATCAGTTAGATTCTCTCGCTGTCTAACTTGGATAATTTCAAGGTTTAAAATAAAAGAAGGAAGTGGCATTCAGGGTTTTAAATAAGGTCATTTGGGCCTTTTGCTTTCAGGAAAGTTTTTGGACATCTGAGAGACTGACTAACACCGAGGTCATATTGGTTTTTGTTGGTGTTACACGAGAATTGGCAAGTTACTGGTCAATGTTTGTGAGTCTTTTAAGCATGCTAAGAAAATGCTCTTCGGGCTAACTCGATCCCAAAGATAGCTCATGAGGTGAGGATTTTTTTTTGTTGTTATGGTGAGGACTGCCTAAAGCCATATAATGAGACAATCAGTTCTCTCAACCAATGTGGATGCCTTAACATCCCTTTGCACACTATCTTGGATATTTGGAGCGTGATCAACATAATATAGGGGTCCAACACTAGGTAAACCAGGAGTAGAGATGAGTCTGAGTCTAATTCCAAGTCTAATACCAGGTTGAATTGTCTGACCTCATTGTTTAAAAGCTTAAGTTATTTGGGAAAACATATTTTTAGTTGCTTAGTTATATTATTTTTCTACACAGTATAAACAACAATAACAAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCTTGGGTAAGTGCCAATTTTCATAGTATGGAAATTCAACTGCATTTTGTCATCCCTTCAGCTGATTAAACTTAATTGAATATGTAACCCAATGTTGTTACTGCATTATGTCATCTCTTCAGCTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAATATGGAGGTAAGCACTCGTGAAGCTTCTGTGTCATGCATAGTTCTGATGATAGTTACTCTGCACATTTTGCTGTATGATACTGATTAGTTAGAACTTATAGTATCTTTTGGTAATTCTTGAAATCACTGCTTAATTTGCGTCCCTTTTTTGGTTCTGTTTGGACCTCAGTATTAAGACTTAAGAGGATTGGTGGTTTTCTTCTTCTTGTTTGTTGGGCACTCAAAGTTACTAGTCGGTTCTCTCTAAAAAGAATGACACAATTACTATTCGGGACTTGAACATTTCTTTCTTTTGTTACTAAGTTGTCAAACATTTTAAATATTTTTTTACTATAAAAATTGTAGATCATTATTCTATTTATGTACTGTTTAAATATATAATCTTATTTAAAAGAGATTAATCTTGCACTTCATCCCATGGAGATTGTTGGTTGAGTTGTTAAGGCTCGAGTAACAACCTGAATATCCTAGATTCAGATTCAGGCTTAACACTCAACATGAGCCCATCTGTTCTAGCCTGTGTGAGCACTGAGTAGGACTACCCCACACTTATGCTTGTACGCTATCATAGGTTGTTCTGTGATTTAGTCGAGTGTGAAGCTGGTTTCAGCACCATCATTTGAAACAGTGTATAAAAGATAGATTCATCTTGTTCTTTGCTTTTCCTGGCCAAACGAAGTAGTCCTCCTCTAGGACGTTAACCTTGTGTAATTTCAAATGGTCGACAACAATCAGAACCCAGGGAACAAATCCTCAAAGATAGCAACAAGTGGCTCAATCAACCTCAATCTAATACCTGACTATACTTCTATACTTGAATTTGCTGAAGATATCTTTAAATAGTTGGTAGAAAATTTTGAAGAAACCATATAGCCGTAGACCTAAATAAATTATAAAATAAAGTATCCCCTCTCTAATTGCTTATGTTTTTAAATGAGGCGGTTTGCATAATTCAACATGACTATCATAATTGGAGTCGCACTGCCACCCCTTAAGGAAAATATTTCCGTGTGCTCGACTCACATAAAAGAATCAGATCTGCATGTGAGGTGGCGTGCTGTAGACCTAAATAACTGTAATAAATAAAACCATCCTTGTAAACTTTTAGATTCGATAGTCATATAACTCAAAGAATAGCACTTCGTATTCAAATTAATTAATATAAACTAGTATATAGTTGTCAGTTTATCTCTTTGGAGTAGGGATGACAATGGGGCGGTGCAGGGCAGGCTGGTGTGGGTTGACCTTAGCCTGCAAATTTTTTAATCCGCCCCGCCCAACATAGCAACAGTTTTCATTTTCAACCCGCCCCACATTATTTTTTAATATTTTCTTTTTATAGTTATGTTTGATACTAAAAAAAATCATGAAAATAAATTCATTTTTTCATTAAGTTGTATTAATTTAATAGGATAGTGACTTAAATTTTTACTTTTTAGAGGTCAATTGGAAAATATGCAAGAAATTGTATTATTTTTATTGAACCATTTTCATTTATTATCTTGAATATTGTAGTAGCTTTAATGAATTTATCTTAATAAGTAATGCTCTATCAATCTATAACATGTAAAAAGTTAAAATTAAGTTTGAACTCACGTAAAAATTATAAAATGACATGTATCGCAATCGCCCCGCCCCATATTAATTAAAAAAATCCACTCCAACCCACCTCGCATCCGACCTGTCCTACATAACCTTAAACCCGCTCCACCCCATTGCCATCCATACTTTTGAGGTTGTAGACTTTTCTGTTAAAAGAAAGAGTCCTCAAGATTGGATGGGCTAAGTTAAGATTTAGAATGGAAGATGGGCGGATGGGGGTGGTAGGTATCTGGAAGTTGTGCGGTGACCTTATAATTTTTTTCAAAAAATATTTAATGAAGACCATAACACAATTTGTTTTACTCAAATTTTGTCAGAAACAACCAGACCTAAAATTGAAATAAATTGAAGTATCTGTACCAAGGTAAGTATTATTAAAAACACTGATGACACCAAGTAGGAAATGTTCCTAACTCAGAGACTGTTTTAGAAAGGCTCTAACAATAAATTAGATCCCAATGGTCACATACTTATACATACAAGTCATTAGTGCTAGACTGCTAGTAGAATATATGCTTTTGTGATTCGTTCAACAAGATACAAGATACTTGATCAATTCAAGTGCTCTATTTGACATTTTTTATATTTTTTGGGCTACAATTTCTTTTACTTTCTCAAAAAAAAAAAACCCCTTCTAAAAAACAGTACAATTTTTTCTTACGAAGATAATGATTTTAAAATATAAAACAGAAGGATTCAAGCTAGTGAATTTTGAAAAATATATATAGTTATTTTGATGATTGACCATCGTACTCAATCAGTAACCATGTTTTAAATGGAGGTTTTGACCTTTTTATGACTGAATTATTTACACATGCCTCACACTTTGTTTTTACTTTTTTGTCATGGTTGCTAGAAAGATTCTGTTTTAAAATTATTTAGAGCTAAGGGATCAGTGTGGTTCATGTTGCTTCGTCTCATCTCTAGTAATTAAATGGGCTTGGACTTTGAACAATTAGGCAAGATTTATGATAAAGTGGAAAAAGTTACCAAGAGCCTTGGTGCTGGTCTGGAAGACCATGGAGGAATCATGTATGGAATCTGCATGTGGAAGTGGTGAAATTGCATTTTCACTCCTCCTCTTTCTTATTGATGTTGCAGTGTTTCCATTACTTTAGTTAGGGCATACTCTAGGGTAATTGATTATTTATTTTCCTTGAAAAGATGTATACTTATCCGATGTCAGCTGATTATAAATTGGTCATAAACTAGGACCCGACACTAGGACATCAGTGAGTTGTTATTCCATTTGTGTGCTATTGTTCTTTGGTTAAAAGGCTTTTGCCTATTTCACATGTGTACCTGGCTACTTGTGAATGGAGTCCTGTGGTTCTTTATGCAGGGAGATGATACAAGGAAAAGTAAGGCCGTTAAGAGACAGGATATTCCTGTCAGTGGAAGTGTTGATGGTGGAATGACCCTCATGGAGCTATCCCAAGCTAAGGAAAAGGAACGCCAGTTAACGGAGCAAGACATAAAGGTGGAGCGAA</genome_strand>
        <mrna_strand>GCTTTACTTGATTCTGGTTTGACTGCTGAAAGGATTCATACTCTTGAGCTTGTAGGATCAGGTTCTCGAATTCCAGCTATGGGAAGAATTTTAAATTCTGTTTTCAGAAAAGAACCGGGGAGGACAATAAATGCTAGTGAGTGTGTTGCACGTGGATGTGCTCTTCAATGTGCGATGCTCAGCCCCATATTTCGTGTTAGAGAGTACGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGGATTCGTTTCCTTTCTCCATTGGGTTTGCATCTGATGAGGGCCCAGTTTGCACCCTATCAAATGGCGTATTGTTTCCAAAGGGCCATAGTTTTCCGAGCATGAAAGTGCTCACATTGCAAAGGAGCAACAGTTTCCACTTGGAAGCATTCTACACTAACCAGAATGAGTTGCCACCTGGTGTATCCGATAAAATAAGCAAATATACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCTTGG....................................................................................................................CTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAATATGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATGATACAAGGAAAAGTAAGGCCGTTAAGAGACAGGATATTCCTGTCAGTGGAAGTGTTGATGGTGGAATGACCCTCATGGAGCTATCCCAAGCTAAGGAAAAGGAACGCCAGTTAACGGAGCAAGACATAAAGGTGGAGCGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E477742" ref_strand="+" ref_description="SGN-E477742 	[cSTD-1-J17]">
      <seq>cgatgagggcccagtttgcaccctatcaaatggcgtattgtttccaaagggccatagttttccgagcatgaaagtgctcacattgcaaaggagcaacagtttccacttggaagcattctacactaaccagaatgagttgccacctggtgtatccgataaaataagcaaatctacgattggcccattccaggttcctcattctgaaaaagcaaaggtcaaagtcaaaattcaattaaacctccatggtgttgttacagtagaatcggcctggctgatcaaagatcaatcaagtcattctacgtcggaaaataatattgatactcatgcagaaaatatggagggagatgatacaaggaaaagtaaggccgttaagagacaggatattcctgtcagtgaaagtgttgatggtggaatgaccctcatggagctatcccaagctcaggaaaaggaatgccagttagctgagcaagacataaaggtggagcgaactaaagacaagaaaaacactctggaggcatacgtctatgatactcgtaataagcttttgaatacctaccggagctttgctacggattcggagagggagggtatctcttgtaatctacaggagactgaagaatggctctatgaagatggagatgatgagtctgaacaggtttatgcagagaagctagaggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="147883" stop="155637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="148182" g_stop="148356" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="175" r_length="175" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="148357" i_stop="151251" i_length="2895">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="151252" g_stop="151347" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="271" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="151348" i_stop="151463" i_length="116">
            <donor d_prob="0.899" d_score="0.98"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="151464" g_stop="151532" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="340" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="151533" i_stop="154469" i_length="2937">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="154470" g_stop="154670" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="541" r_length="201" r_score="0.965"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="154671" i_stop="155198" i_length="528">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="155199" g_stop="155337" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="680" r_length="139" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E477742" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="148182" e_stop="148356"/>
          <exon e_start="151252" e_stop="151347"/>
          <exon e_start="151464" e_stop="151532"/>
          <exon e_start="154470" e_stop="154670"/>
          <exon e_start="155199" e_stop="155337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGAGGGCCCAGTTTGCACCCTATCAAATGGCGTATTGTTTCCAAAGGGCCATAGTTTTCCGAGCATGAAAGTGCTCACATTGCAAAGGAGCAACAGTTTCCACTTGGAAGCATTCTACACTAACCAGAATGAGTTGCCACCTGGTGTATCCGATAAAATAAGCAAATATACGGTACAGTGCATTTTTCCCTGATAACTAATATGAGAACTTCTATCCTCTAGTTTTGTTTGAGATTTCTAGATGTATTATATAACATTTGATCTAATTTTCTTGATTATGTTCGGAATGATTCTCGATAATTGGATTACTCTAATCTAGTCATAGCTAAAGTTCTAGTTGTTGAGGTTACAACTTAAGATCTCTATGCATTTGATTTTTTCAAAGCCCATTGAACCACCTTTGAGAACTTACTACAGCAGACAATTGTATCATTTGTCACATATTTGTTCTTCTAACCCAAATTAGTTGTCCACTTCCCTTTTTGGTTTGTTTCCAGTAATTTATCCCTTGAAAGAGAAGTTCTTATCTTGATGGATATCTCAATATGTCTGTATATCATATTCCCGAAAAGGTAAGTAGACATCAAAAGAGAAAGAAAAATTCAATAAGTCAACTATGTCTACAGGGAGTATTAGATATTGTACTATTTCATTGTATGTTTAAATAGCTACATGCACTACCCAGTAGCTTTGCATATTTTATGTCGCAATATCTTGGTGATCTTCTCTATTGAATGAGCCCGCTTGAGAAGGTCCTCACTGAACCACTCCCAGAAGCAGTTTTACCTTCCAACATACAACAACATACCCAGTGTAATCTCACAAGTGGGTCTGGGGAGGGTAATGTGTACTTGGGAGGGTGATGTGTACACAAATTGTTTCTGGTAGACTTTTGCCGTCCAATGTGAGCCCTATAAATAAGGCAAAAAAAATTGAACGTAATATCTCTGCTATATTTGGACAATCTAGGGTATAAAACTGAACCACATGTGTTCATAGCTAATGTACATCAGCCAATTTTGTGATTCAAGATTTTCAAAACTAGACATTGCCGGTGCACACTATGTAAACCTTTGATCCGTTGTACAGTTTGGACTGCTACTTCAGTCTCTTGCATTGCAGATTAGCTACAGAGTCGACGATAATTTGCTGGGTTTCAATTTCTCCGGTTTACTTGAAAGGAACTTTCATATCTGCTGTTATTACCTAAATTAGCATCATGCATGAGAAGGTAAAGAAAAAAGGGATGTCATTGGTACGAACGAAATGTAGTTTTGATAAGCTTTATTGTGACTGAATATATGCAGCTGTGATGATTTATCATTAAACGAGAAAAAAATTATCTTCTGATATTTTGGAGGATTAAGTTCTGGTAGTACATTCACTTTTCTAATAGGTAGAATAATATATAGTTGCTCAAATACCAGAAAATGTTGTATCATGATTTGTTATGCAAACAAACATACGTGTACATCTGTCCACGAATGACTTTGTCTCCCAGAAAAAAACACATTTAGGTGGTTTCTGTGACATTAAAGAAAGTGCAGTAAATTGGAAATCATAATTTTGATGGAATATTGTGAGCAGTGTTTAAATTAACATGGTATTGAGGGATGATGCAAAAAGATGTATTGGTGTTAATTATAGCAGTGATGCAACTTCCTTATTTTCTTAAATATTTGGCTATCATAAGTTTCACTATAAACTCTTTGACCATGAGCGTTATTGGTTTAGTACTGTCAAATGTTGTACTTATCCTATAATTAAAACATGTTCTCAAGGCCTATTGTTCTGCCCTTGCAATTTCATGGGCTCACAATGAAAACTTGTGAAACACCCTTTTCTGCTAAAATGTTCATAAAATTTATTACTGTACATTATAAAATGTGATGAAGTTGCGAAACACCCTTTTTGGTTGCCCTTCTATACTGTTTCAAATATCAGTTAGATTCTCTCGCTGTCTAACTTGGATAATTTCAAGGTTTAAAATAAAAGAAGGAAGTGGCATTCAGGGTTTTAAATAAGGTCATTTGGGCCTTTTGCTTTCAGGAAAGTTTTTGGACATCTGAGAGACTGACTAACACCGAGGTCATATTGGTTTTTGTTGGTGTTACACGAGAATTGGCAAGTTACTGGTCAATGTTTGTGAGTCTTTTAAGCATGCTAAGAAAATGCTCTTCGGGCTAACTCGATCCCAAAGATAGCTCATGAGGTGAGGATTTTTTTTTGTTGTTATGGTGAGGACTGCCTAAAGCCATATAATGAGACAATCAGTTCTCTCAACCAATGTGGATGCCTTAACATCCCTTTGCACACTATCTTGGATATTTGGAGCGTGATCAACATAATATAGGGGTCCAACACTAGGTAAACCAGGAGTAGAGATGAGTCTGAGTCTAATTCCAAGTCTAATACCAGGTTGAATTGTCTGACCTCATTGTTTAAAAGCTTAAGTTATTTGGGAAAACATATTTTTAGTTGCTTAGTTATATTATTTTTCTACACAGTATAAACAACAATAACAAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCTTGGGTAAGTGCCAATTTTCATAGTATGGAAATTCAACTGCATTTTGTCATCCCTTCAGCTGATTAAACTTAATTGAATATGTAACCCAATGTTGTTACTGCATTATGTCATCTCTTCAGCTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAATATGGAGGTAAGCACTCGTGAAGCTTCTGTGTCATGCATAGTTCTGATGATAGTTACTCTGCACATTTTGCTGTATGATACTGATTAGTTAGAACTTATAGTATCTTTTGGTAATTCTTGAAATCACTGCTTAATTTGCGTCCCTTTTTTGGTTCTGTTTGGACCTCAGTATTAAGACTTAAGAGGATTGGTGGTTTTCTTCTTCTTGTTTGTTGGGCACTCAAAGTTACTAGTCGGTTCTCTCTAAAAAGAATGACACAATTACTATTCGGGACTTGAACATTTCTTTCTTTTGTTACTAAGTTGTCAAACATTTTAAATATTTTTTTACTATAAAAATTGTAGATCATTATTCTATTTATGTACTGTTTAAATATATAATCTTATTTAAAAGAGATTAATCTTGCACTTCATCCCATGGAGATTGTTGGTTGAGTTGTTAAGGCTCGAGTAACAACCTGAATATCCTAGATTCAGATTCAGGCTTAACACTCAACATGAGCCCATCTGTTCTAGCCTGTGTGAGCACTGAGTAGGACTACCCCACACTTATGCTTGTACGCTATCATAGGTTGTTCTGTGATTTAGTCGAGTGTGAAGCTGGTTTCAGCACCATCATTTGAAACAGTGTATAAAAGATAGATTCATCTTGTTCTTTGCTTTTCCTGGCCAAACGAAGTAGTCCTCCTCTAGGACGTTAACCTTGTGTAATTTCAAATGGTCGACAACAATCAGAACCCAGGGAACAAATCCTCAAAGATAGCAACAAGTGGCTCAATCAACCTCAATCTAATACCTGACTATACTTCTATACTTGAATTTGCTGAAGATATCTTTAAATAGTTGGTAGAAAATTTTGAAGAAACCATATAGCCGTAGACCTAAATAAATTATAAAATAAAGTATCCCCTCTCTAATTGCTTATGTTTTTAAATGAGGCGGTTTGCATAATTCAACATGACTATCATAATTGGAGTCGCACTGCCACCCCTTAAGGAAAATATTTCCGTGTGCTCGACTCACATAAAAGAATCAGATCTGCATGTGAGGTGGCGTGCTGTAGACCTAAATAACTGTAATAAATAAAACCATCCTTGTAAACTTTTAGATTCGATAGTCATATAACTCAAAGAATAGCACTTCGTATTCAAATTAATTAATATAAACTAGTATATAGTTGTCAGTTTATCTCTTTGGAGTAGGGATGACAATGGGGCGGTGCAGGGCAGGCTGGTGTGGGTTGACCTTAGCCTGCAAATTTTTTAATCCGCCCCGCCCAACATAGCAACAGTTTTCATTTTCAACCCGCCCCACATTATTTTTTAATATTTTCTTTTTATAGTTATGTTTGATACTAAAAAAAATCATGAAAATAAATTCATTTTTTCATTAAGTTGTATTAATTTAATAGGATAGTGACTTAAATTTTTACTTTTTAGAGGTCAATTGGAAAATATGCAAGAAATTGTATTATTTTTATTGAACCATTTTCATTTATTATCTTGAATATTGTAGTAGCTTTAATGAATTTATCTTAATAAGTAATGCTCTATCAATCTATAACATGTAAAAAGTTAAAATTAAGTTTGAACTCACGTAAAAATTATAAAATGACATGTATCGCAATCGCCCCGCCCCATATTAATTAAAAAAATCCACTCCAACCCACCTCGCATCCGACCTGTCCTACATAACCTTAAACCCGCTCCACCCCATTGCCATCCATACTTTTGAGGTTGTAGACTTTTCTGTTAAAAGAAAGAGTCCTCAAGATTGGATGGGCTAAGTTAAGATTTAGAATGGAAGATGGGCGGATGGGGGTGGTAGGTATCTGGAAGTTGTGCGGTGACCTTATAATTTTTTTCAAAAAATATTTAATGAAGACCATAACACAATTTGTTTTACTCAAATTTTGTCAGAAACAACCAGACCTAAAATTGAAATAAATTGAAGTATCTGTACCAAGGTAAGTATTATTAAAAACACTGATGACACCAAGTAGGAAATGTTCCTAACTCAGAGACTGTTTTAGAAAGGCTCTAACAATAAATTAGATCCCAATGGTCACATACTTATACATACAAGTCATTAGTGCTAGACTGCTAGTAGAATATATGCTTTTGTGATTCGTTCAACAAGATACAAGATACTTGATCAATTCAAGTGCTCTATTTGACATTTTTTATATTTTTTGGGCTACAATTTCTTTTACTTTCTCAAAAAAAAAAAACCCCTTCTAAAAAACAGTACAATTTTTTCTTACGAAGATAATGATTTTAAAATATAAAACAGAAGGATTCAAGCTAGTGAATTTTGAAAAATATATATAGTTATTTTGATGATTGACCATCGTACTCAATCAGTAACCATGTTTTAAATGGAGGTTTTGACCTTTTTATGACTGAATTATTTACACATGCCTCACACTTTGTTTTTACTTTTTTGTCATGGTTGCTAGAAAGATTCTGTTTTAAAATTATTTAGAGCTAAGGGATCAGTGTGGTTCATGTTGCTTCGTCTCATCTCTAGTAATTAAATGGGCTTGGACTTTGAACAATTAGGCAAGATTTATGATAAAGTGGAAAAAGTTACCAAGAGCCTTGGTGCTGGTCTGGAAGACCATGGAGGAATCATGTATGGAATCTGCATGTGGAAGTGGTGAAATTGCATTTTCACTCCTCCTCTTTCTTATTGATGTTGCAGTGTTTCCATTACTTTAGTTAGGGCATACTCTAGGGTAATTGATTATTTATTTTCCTTGAAAAGATGTATACTTATCCGATGTCAGCTGATTATAAATTGGTCATAAACTAGGACCCGACACTAGGACATCAGTGAGTTGTTATTCCATTTGTGTGCTATTGTTCTTTGGTTAAAAGGCTTTTGCCTATTTCACATGTGTACCTGGCTACTTGTGAATGGAGTCCTGTGGTTCTTTATGCAGGGAGATGATACAAGGAAAAGTAAGGCCGTTAAGAGACAGGATATTCCTGTCAGTGGAAGTGTTGATGGTGGAATGACCCTCATGGAGCTATCCCAAGCTAAGGAAAAGGAACGCCAGTTAACGGAGCAAGACATAAAGGTGGAGCGAACTAAAGACAAGAAAAACACCCTGGAGGCATACGTCTATGAAACTCGTAATAAGGTATGACATCAAATTTTAAGTCTCATAATTATCTTTGCTTGGAAGACTTTAATTCAAATGATCTGTTTCACACTTTTAAGCCGAGAATATGTCTTTTGAGGATATAACATTTTTATCTTTAAAATATAAAATTTCAAACTGAAGCAGTAGGTTTAGGAGTGATGAATGCATCAATGTGAAATTTTACTTTCTGATTATCCTTTCCTTTACAAGTCATGTTCTTTCAGTTTTCAGTGGGCTGTTGAATTTGGCAGTATCACTTGCATTTATAACTTGTCCTTCTGCATAATTTTGTTTTGCAAATACCACTATGTGACACTCATTACTTTTAGACACATGTTGGAGCTGATACATACTACTTTATCACTATTTAGTACCTTGTCATTTTGTTATGGAAGTTTGTGTCCTTTTCCAGATAGTTTCAGATACACCATTTCTTTAAATTTTGGTTTTGGTTTTAATTTAGTTGTTGTTATCACTTATCAGTATCTGCCCCATTTCCTTTATTTTATGCATCTATTTGAATAGCTTTTGAATACCTACCGGAGCTTTGCTACGGATTCGGAGAGGGAGGGTATCTCTTGTAATCTACAACAGACTGAAGAATGGCTCTATGAAGATGGAGATGATGAGTCTGAACAAGTTTATGCAGAGAAGCTGGAGGATC</genome_strand>
        <mrna_strand>CGATGAGGGCCCAGTTTGCACCCTATCAAATGGCGTATTGTTTCCAAAGGGCCATAGTTTTCCGAGCATGAAAGTGCTCACATTGCAAAGGAGCAACAGTTTCCACTTGGAAGCATTCTACACTAACCAGAATGAGTTGCCACCTGGTGTATCCGATAAAATAAGCAAATCTACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCCTGG....................................................................................................................CTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTCATGCAGAAAATATGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATGATACAAGGAAAAGTAAGGCCGTTAAGAGACAGGATATTCCTGTCAGTGAAAGTGTTGATGGTGGAATGACCCTCATGGAGCTATCCCAAGCTCAGGAAAAGGAATGCCAGTTAGCTGAGCAAGACATAAAGGTGGAGCGAACTAAAGACAAGAAAAACACTCTGGAGGCATACGTCTATGATACTCGTAATAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGAATACCTACCGGAGCTTTGCTACGGATTCGGAGAGGGAGGGTATCTCTTGTAATCTACAGGAGACTGAAGAATGGCTCTATGAAGATGGAGATGATGAGTCTGAACAGGTTTATGCAGAGAAGCTAGAGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E333167" ref_strand="+" ref_description="SGN-E333167 	[cTOD-19-L8]">
      <seq>ctcgtgccgttctctctctcaaaagaaaagaaatcatattcgttataaaggtttcaaaattttcaattgaaggacaggaagatggctttctgctagcctatttccctgaaagcacactaacgtgttgcatgttaaatgttattctcatgtggaatatgatcaaaagacgccttttatttggtcttattatgctatcaagtatctaccgggatctaatcttatgctgtaaaaggagttatccgatgactgtgtctttttgaatctctttggtcggtgagtctagaagttgagaatatttgtagcattaactttatttcttccttgctttagaaggcaggttatgcaccttctgcttccttgctgaatctcaatgtgcaacagtttgaggagaatgcttaactgtaaaaataattaatttcagcagttttagaaactcaaattaatgccagagatatgctgttgccaagtgtcttaagaatttgcaattaatgctctcatccttgatgccaagttgactccatcaatttgtcagttaatctcactctgttcttatttttttttcagcttggcccatttcaggttcctcattctgaaaaagcaaaggtcaaagtcaaaattcaattaaacctccatggtgttgttacagtagaatcggcttggctgatcaaagatcaatcaagtcattctacgtcggaaaataatattgatacttatgcagaaaatatggagggagatgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="150407" stop="151835"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150708" g_stop="151347" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="660" r_length="640" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="151348" i_stop="151463" i_length="116">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="151464" g_stop="151532" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="729" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E333167" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150708" e_stop="151347"/>
          <exon e_start="151464" e_stop="151532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCTTGGGTAAGTGCCAATTTTCATAGTATGGAAATTCAACTGCATTTTGTCATCCCTTCAGCTGATTAAACTTAATTGAATATGTAACCCAATGTTGTTACTGCATTATGTCATCTCTTCAGCTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAATATGGAG</genome_strand>
        <mrna_strand>AAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTTCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCTTGG....................................................................................................................CTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAATATGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E332575" ref_strand="+" ref_description="SGN-E332575 	[cTOD-18-C18]">
      <seq>ctcgtgccgttctctctctcaaaagaaaagaaatcatattcgttataaaggtttcaaaattttcaattgaaggacaggaagatggctttctgctagcctatttccctgaaagcacactaacgtgttgcatgttaaatgttattctcatgtggaatatgatcaaaagacgccttttatttggtcttattatgctatcaagtatctaccgggatctaatcttatgctgtaaaaggagttatccgatgactgtgtctttttgaatctctttggtcggtgagtctagaagttgagaatatttgtagcattaactttatttcttccttgctttagaaggcaggttatgcaccttctgcttccttgctgaatctcaatgtgcaacagtttgaggagaatgcttaactgtaaaaataattaatttcagcagttttagaaactcaaattaatgccagagatatgctgttgccaagtgtcttaagaatttgcaattaatgctctcatccttgatgccaagttgactccatcaatttgtcagttaatctcactctgttcttatttttttttcagcttggcccattccaggttcctcattctgaaaaagcaaaggtcaaagtcaaaattcaattaaacctnccatggtgttgttacagtagaatcggcttggctgatcaaagatcaatcaagtcattctacgtcggaaaataatattgatacttatgcagaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="150407" stop="151826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150708" g_stop="151347" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="661" r_length="641" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="151348" i_stop="151463" i_length="116">
            <donor d_prob="0.899" d_score="0.96"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="151464" g_stop="151526" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="724" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E332575" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150708" e_stop="151347"/>
          <exon e_start="151464" e_stop="151526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCT-CCATGGTGTTGTTACAGTAGAATCGGCTTGGGTAAGTGCCAATTTTCATAGTATGGAAATTCAACTGCATTTTGTCATCCCTTCAGCTGATTAAACTTAATTGAATATGTAACCCAATGTTGTTACTGCATTATGTCATCTCTTCAGCTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAAT</genome_strand>
        <mrna_strand>AAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTNCCATGGTGTTGTTACAGTAGAATCGGCTTGG....................................................................................................................CTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E333960" ref_strand="+" ref_description="SGN-E333960 	[cTOD-24-N9]">
      <seq>ctcgtgccgttctctctctcaaaagaaaagaaatcatattcgttataaaggtttcaaaattttcaattgaaggacaggaagatggctttctgctagcctatttccctgaaagcacactaacgtgttgcatgttaaatgttattctcatgtggaatatgatcaaaagacgccttttatttggtcttattatgctatcaagtatctaccgggatctaatcttatgctgtaaaaggagttatccgatgactgtgtctttttgaatctctttggtcggtgagtctagaagttgagaatatttgtagcattaactttatttcttccttgctttagaaggcaggttatgcaccttctgcttccttgctgaatctcaatgtgcaacagtttgaggagaatgcttaactgtaaaaataattaatttcagcagttttagaaactcaaattaatgccagagatatgctgttgccaagtgtcttaagaatttgcaattaatgctctcatccttgatgccaagttgactccatcaatttgtcangtaatctcactctgttcttatttttttttcagcttggcccattccaggntcctcattctgaaaaagcaaaggtcaaagtcaaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="150407" stop="151605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150708" g_stop="151305" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="618" r_length="598" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E333960" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150708" e_stop="151305"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATT</genome_strand>
        <mrna_strand>AAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCANGTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGNTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E210654" ref_strand="+" ref_description="SGN-E210654 	[cLEC-68-D13]">
      <seq>caagctaaggaaaaggaacgccagttaacggagcaagacataaaggtggagcgaactaaagacaagaaaaacaccctggaggcatacgtctatgaaactcgtaataagcttttgaatacctaccggagctttgctacggattcggagagggagggtatctcttgtaatctacaacagactgaagaatggctctatgaagatggagatgatgagtctgaacaagtttatgcagagaagctggaggatcttaaaaagatggtggaccctgtggagcatcgatataaggaagaagaggcgcgggcacaagcaacacgacatctattaaataccattgtggaacatcgaatggctgcaggatcacttccagccagtgagaaagaagctgtcactaatgaatgccataaagcagagcagtggcttcgagataaatcccaccagcaggagacattgcccaaaagtgctgatccagtattgtggtctactgaaatcaagagaaagaccgaggcttttgaagcgatgtgtaagcatgtaacgaggcacaagtcatcgccccaaaagactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="154263" stop="156757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154563" g_stop="154670" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154671" i_stop="155198" i_length="528">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="155199" g_stop="155345" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="255" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="155346" i_stop="155433" i_length="88">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="155434" g_stop="155562" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="384" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="155563" i_stop="155636" i_length="74">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="155637" g_stop="155767" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="515" r_length="131" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="155768" i_stop="156410" i_length="643">
            <donor d_prob="0.799" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="156411" g_stop="156457" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="562" r_length="47" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E210654" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154563" e_stop="154670"/>
          <exon e_start="155199" e_stop="155345"/>
          <exon e_start="155434" e_stop="155562"/>
          <exon e_start="155637" e_stop="155767"/>
          <exon e_start="156411" e_stop="156457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCTAAGGAAAAGGAACGCCAGTTAACGGAGCAAGACATAAAGGTGGAGCGAACTAAAGACAAGAAAAACACCCTGGAGGCATACGTCTATGAAACTCGTAATAAGGTATGACATCAAATTTTAAGTCTCATAATTATCTTTGCTTGGAAGACTTTAATTCAAATGATCTGTTTCACACTTTTAAGCCGAGAATATGTCTTTTGAGGATATAACATTTTTATCTTTAAAATATAAAATTTCAAACTGAAGCAGTAGGTTTAGGAGTGATGAATGCATCAATGTGAAATTTTACTTTCTGATTATCCTTTCCTTTACAAGTCATGTTCTTTCAGTTTTCAGTGGGCTGTTGAATTTGGCAGTATCACTTGCATTTATAACTTGTCCTTCTGCATAATTTTGTTTTGCAAATACCACTATGTGACACTCATTACTTTTAGACACATGTTGGAGCTGATACATACTACTTTATCACTATTTAGTACCTTGTCATTTTGTTATGGAAGTTTGTGTCCTTTTCCAGATAGTTTCAGATACACCATTTCTTTAAATTTTGGTTTTGGTTTTAATTTAGTTGTTGTTATCACTTATCAGTATCTGCCCCATTTCCTTTATTTTATGCATCTATTTGAATAGCTTTTGAATACCTACCGGAGCTTTGCTACGGATTCGGAGAGGGAGGGTATCTCTTGTAATCTACAACAGACTGAAGAATGGCTCTATGAAGATGGAGATGATGAGTCTGAACAAGTTTATGCAGAGAAGCTGGAGGATCTTAAAAAGGTTCTTGTCATTTCGTATTAGTTGAAGAATTTAGTTTTTCTTTTCCAGAGCTTATTTTGAAAGTGAGCAACCAACCTTATATTATTAGATGGTGGACCCTGTGGAGCATCGATATAAGGAAGAAGAGGCGCGGGCACAAGCAACACGACATCTATTAAATACCATTGTGGAACATCGAATGGCTGCAGGATCACTTCCAGCCAGTGAGAAAGAAGCTGTATGACCTTGTCTATGTATAACATGCTACAGGTCCTTGTTACATTGTATTAACCTGAATTTTTTTCTTTGCAGGTCACTAATGAATGCCATAAAGCAGAGCAGTGGCTTCGAGATAAATCCCACCAGCAGGAGACATTGCCCAGAAGTGCTGATCCAGTATTGTGGTCTACTGAAATCAAGAGAAAGACCGAGGCTTTTGAAGCGTATGTTTGTCATCTTAAAAACCTGCCTAATTAACATGAATCTTGTTTCCCCACATGGTTGTTAGACATCTTATGATTGCGTGTTTTCTGTACTTCTTTCACCCACAATTAGATTTTCGCACTGTCTACAAAATCATACTAGAACTACTAAGTCTGAATCCCTTCAACATCCATTTCAATCCCTAAAGAACTAGATGTGAGTGACTTTTGAATTTATCCCTAATTTTGATGTAGAAACACTCAACCAAAATCCCTTTTAGTAGTTTCACATGATAAAGGTTGTAATCGAAGATAAGTGTGTGCGTGTGAGTATACATAGGTATACATACCCATCCAGACACACATATATAATTCCACGTGTTTTTCAGACTTAGAGAACATATTTCTCATTTTAAACTGCCTACACTTATCACATACACTTAGAAGAGGCATCAAAGCTAAGCAATTCTAGCCTTACTCCTTAACAAAGTAGTTAGAATTTACTACTGATTGGTTCTTGAATTATGGTTAAGACCAAAATTAGAAGATCCTAGCAAGTGTCTCTTGAGAGAACTGCAGCTTATTAGTTTTGCTGCATCTCGTGTTTTTGAGCATCAACTTTTTCTTTGCCTGATGTGCTACAATATTGTGACACACATTTCAGGATGTGTAAGCATGTAACGAGGCACAAGTCATCGCCCCAAAAGACTG</genome_strand>
        <mrna_strand>CAAGCTAAGGAAAAGGAACGCCAGTTAACGGAGCAAGACATAAAGGTGGAGCGAACTAAAGACAAGAAAAACACCCTGGAGGCATACGTCTATGAAACTCGTAATAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGAATACCTACCGGAGCTTTGCTACGGATTCGGAGAGGGAGGGTATCTCTTGTAATCTACAACAGACTGAAGAATGGCTCTATGAAGATGGAGATGATGAGTCTGAACAAGTTTATGCAGAGAAGCTGGAGGATCTTAAAAAG........................................................................................ATGGTGGACCCTGTGGAGCATCGATATAAGGAAGAAGAGGCGCGGGCACAAGCAACACGACATCTATTAAATACCATTGTGGAACATCGAATGGCTGCAGGATCACTTCCAGCCAGTGAGAAAGAAGCT..........................................................................GTCACTAATGAATGCCATAAAGCAGAGCAGTGGCTTCGAGATAAATCCCACCAGCAGGAGACATTGCCCAAAAGTGCTGATCCAGTATTGTGGTCTACTGAAATCAAGAGAAAGACCGAGGCTTTTGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGTAAGCATGTAACGAGGCACAAGTCATCGCCCCAAAAGACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E332354" ref_strand="+" ref_description="SGN-E332354 	[cTOD-17-L18]">
      <seq>gaagaagaggcgcgggcacaagcaacacgacatctattaaataccattgtggaacatcgaatggctgcaggatcacttccagccagtgagaaagaagctgtcactaatgaatgccataaagcagagcagtggcttcgagataaatcccaccagcaggagacattgcccagaagtgctgatccagtattgtggtctactgaaatcaagagaaagaccgaggcttttgaagcgatgtgtaagcatgtaacgaggcacaagtcatcgccccaaaagactgaggatggttcaggtttaaaccccagaaataaaagggaagatgggatggatgtagattaaactgcatcagagacaagtatgatagcaggcatgagaaatgatcagattagttgttactgaggctggggaaacaccagccactagaggcctattgcgagttatctccggtatttaaatcaaatcacattctctattttgggtagaatcatttgttatttactcaaatttcacgtttctcgtgatgtgttatcttgtggcctcaaaattaattattgcagagtttctgctgctattgtagtttttaacagcttataggaagcagcacattctgtacttggatattgagaaaaaactaaagatttttcatcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="155164" stop="157124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="155464" g_stop="155562" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="155563" i_stop="155636" i_length="74">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="155637" g_stop="155767" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="230" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="155768" i_stop="156410" i_length="643">
            <donor d_prob="0.799" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="156411" g_stop="156825" g_length="415"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="645" r_length="415" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="646" polyA_stop="655"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E332354" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="155464" e_stop="155562"/>
          <exon e_start="155637" e_stop="155767"/>
          <exon e_start="156411" e_stop="156825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAGAGGCGCGGGCACAAGCAACACGACATCTATTAAATACCATTGTGGAACATCGAATGGCTGCAGGATCACTTCCAGCCAGTGAGAAAGAAGCTGTATGACCTTGTCTATGTATAACATGCTACAGGTCCTTGTTACATTGTATTAACCTGAATTTTTTTCTTTGCAGGTCACTAATGAATGCCATAAAGCAGAGCAGTGGCTTCGAGATAAATCCCACCAGCAGGAGACATTGCCCAGAAGTGCTGATCCAGTATTGTGGTCTACTGAAATCAAGAGAAAGACCGAGGCTTTTGAAGCGTATGTTTGTCATCTTAAAAACCTGCCTAATTAACATGAATCTTGTTTCCCCACATGGTTGTTAGACATCTTATGATTGCGTGTTTTCTGTACTTCTTTCACCCACAATTAGATTTTCGCACTGTCTACAAAATCATACTAGAACTACTAAGTCTGAATCCCTTCAACATCCATTTCAATCCCTAAAGAACTAGATGTGAGTGACTTTTGAATTTATCCCTAATTTTGATGTAGAAACACTCAACCAAAATCCCTTTTAGTAGTTTCACATGATAAAGGTTGTAATCGAAGATAAGTGTGTGCGTGTGAGTATACATAGGTATACATACCCATCCAGACACACATATATAATTCCACGTGTTTTTCAGACTTAGAGAACATATTTCTCATTTTAAACTGCCTACACTTATCACATACACTTAGAAGAGGCATCAAAGCTAAGCAATTCTAGCCTTACTCCTTAACAAAGTAGTTAGAATTTACTACTGATTGGTTCTTGAATTATGGTTAAGACCAAAATTAGAAGATCCTAGCAAGTGTCTCTTGAGAGAACTGCAGCTTATTAGTTTTGCTGCATCTCGTGTTTTTGAGCATCAACTTTTTCTTTGCCTGATGTGCTACAATATTGTGACACACATTTCAGGATGTGTAAGCATGTAACGAGGCACAAGTCATCGCCCCAAAAGACTGAGGATGGTTCAGGTTTAAACCCCAGAAATAAAAGGGAAGATGGGATGGATGTAGATTAAACTGCATCAGAGACAAGTATGATAGCAGGCATGAGAAATGATCAGATTAGTTGTTACTGAGGCTGGGGAAACACCAGCCACTAGAGGCCTATTGCGAGTTATCTCCGGTATTTAAATCAAATCACATTCTCTATTTTGGGTAGAATCATTTGTTATTTACTCAAATTTCACGTTTCTCGTGATGTGTTATCTTGTGGCCTCAAAATTAATTATTGCAGAGTTTCTGCTGCTATTGTAGTTTTTAACAGCTTATAGGAGGCAGCACATTCTGTACTTGGATATTGAGAAAAAACTAAAGATTTTTCATCC</genome_strand>
        <mrna_strand>GAAGAAGAGGCGCGGGCACAAGCAACACGACATCTATTAAATACCATTGTGGAACATCGAATGGCTGCAGGATCACTTCCAGCCAGTGAGAAAGAAGCT..........................................................................GTCACTAATGAATGCCATAAAGCAGAGCAGTGGCTTCGAGATAAATCCCACCAGCAGGAGACATTGCCCAGAAGTGCTGATCCAGTATTGTGGTCTACTGAAATCAAGAGAAAGACCGAGGCTTTTGAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGTAAGCATGTAACGAGGCACAAGTCATCGCCCCAAAAGACTGAGGATGGTTCAGGTTTAAACCCCAGAAATAAAAGGGAAGATGGGATGGATGTAGATTAAACTGCATCAGAGACAAGTATGATAGCAGGCATGAGAAATGATCAGATTAGTTGTTACTGAGGCTGGGGAAACACCAGCCACTAGAGGCCTATTGCGAGTTATCTCCGGTATTTAAATCAAATCACATTCTCTATTTTGGGTAGAATCATTTGTTATTTACTCAAATTTCACGTTTCTCGTGATGTGTTATCTTGTGGCCTCAAAATTAATTATTGCAGAGTTTCTGCTGCTATTGTAGTTTTTAACAGCTTATAGGAAGCAGCACATTCTGTACTTGGATATTGAGAAAAAACTAAAGATTTTTCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E234559" ref_strand="-" ref_description="SGN-E234559 	[cLEL-6-L69]">
      <seq>gaagatgggatggatgtagattaaactgcatcagagacaagtatgatagcaggcatgagaaatgatcagattagttgttactgaggctggggaaacaccagccactagaggcctattgcgagttatctccggtatttaaatcaaatcacattctctattttgggtagaatcatttgttatttactcaaatttcacgtttctcgtgatgtgttatcttgtggcctcaaaattaattattgcagagtttctgctgctattgtagtttttaacagcttataggaggcagcacattctgtacttggatattgagaaaaaactaaagatttttcatccgttttgttctgattgttctctattgtgagtagcgcaacagccttagggggtgttttggttgcggataaagttagataggaattgtaatgcaacaattgtaacacatggataaataatcatttcattatctggtgaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="156193" stop="157263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="156493" g_stop="156958" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="468" polyA_stop="486"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E234559" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E234559" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="156493" e_stop="156958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGGGATGGATGTAGATTAAACTGCATCAGAGACAAGTATGATAGCAGGCATGAGAAATGATCAGATTAGTTGTTACTGAGGCTGGGGAAACACCAGCCACTAGAGGCCTATTGCGAGTTATCTCCGGTATTTAAATCAAATCACATTCTCTATTTTGGGTAGAATCATTTGTTATTTACTCAAATTTCACGTTTCTCGTGATGTGTTATCTTGTGGCCTCAAAATTAATTATTGCAGAGTTTCTGCTGCTATTGTAGTTTTTAACAGCTTATAGGAGGCAGCACATTCTGTACTTGGATATTGAGAAAAAACTAAAGATTTTTCATCCGTTTTGTTCTGATTGTTCTCTATTGTGAGTAGCGCAACAGCCTTAGGGGGTGTTTTGGTTGCGGATAAAGTTAGATAGGAATTGTAATGCAACAATTGTAACACATGGATAAATAATCATTTCATTATCTGGT</genome_strand>
        <mrna_strand>GAAGATGGGATGGATGTAGATTAAACTGCATCAGAGACAAGTATGATAGCAGGCATGAGAAATGATCAGATTAGTTGTTACTGAGGCTGGGGAAACACCAGCCACTAGAGGCCTATTGCGAGTTATCTCCGGTATTTAAATCAAATCACATTCTCTATTTTGGGTAGAATCATTTGTTATTTACTCAAATTTCACGTTTCTCGTGATGTGTTATCTTGTGGCCTCAAAATTAATTATTGCAGAGTTTCTGCTGCTATTGTAGTTTTTAACAGCTTATAGGAGGCAGCACATTCTGTACTTGGATATTGAGAAAAAACTAAAGATTTTTCATCCGTTTTGTTCTGATTGTTCTCTATTGTGAGTAGCGCAACAGCCTTAGGGGGTGTTTTGGTTGCGGATAAAGTTAGATAGGAATTGTAATGCAACAATTGTAACACATGGATAAATAATCATTTCATTATCTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E235231" ref_strand="-" ref_description="SGN-E235231 	[cLEL-6-L69]">
      <seq>atggatgtagattaaactgcatcagaggcaagtatgatagcaggcatgagaaatgatcagattagttgttactgaggctggggaaacaccagccactagaggcctattgcgagttatctccggtatttaaatcaaatcacattctctattttgggtagaatcatttgttatttactcaaatttcacgtttctcgtgatgtgttatcttgtggcctcaaaattaattattgcagagtttctgctgctattgtagtttttaacagcttataggaggcagcacattctgtacttggatattgagaaaaaactaaagatttttcatccgttttgttctgattgttctctattgtgagtagcgcaacagccttagggggtgttttggttgcggataaagttagataggaattgtaatgcaacaattgtaacacatggataaataatcatttcattatctggtgaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="+" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="156202" stop="157263"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="156502" g_stop="156958" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="457" r_length="457" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="459" polyA_stop="477"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="+" ref_id="SGN-E235231" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235231" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="156502" e_stop="156958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGATGTAGATTAAACTGCATCAGAGACAAGTATGATAGCAGGCATGAGAAATGATCAGATTAGTTGTTACTGAGGCTGGGGAAACACCAGCCACTAGAGGCCTATTGCGAGTTATCTCCGGTATTTAAATCAAATCACATTCTCTATTTTGGGTAGAATCATTTGTTATTTACTCAAATTTCACGTTTCTCGTGATGTGTTATCTTGTGGCCTCAAAATTAATTATTGCAGAGTTTCTGCTGCTATTGTAGTTTTTAACAGCTTATAGGAGGCAGCACATTCTGTACTTGGATATTGAGAAAAAACTAAAGATTTTTCATCCGTTTTGTTCTGATTGTTCTCTATTGTGAGTAGCGCAACAGCCTTAGGGGGTGTTTTGGTTGCGGATAAAGTTAGATAGGAATTGTAATGCAACAATTGTAACACATGGATAAATAATCATTTCATTATCTGGT</genome_strand>
        <mrna_strand>ATGGATGTAGATTAAACTGCATCAGAGGCAAGTATGATAGCAGGCATGAGAAATGATCAGATTAGTTGTTACTGAGGCTGGGGAAACACCAGCCACTAGAGGCCTATTGCGAGTTATCTCCGGTATTTAAATCAAATCACATTCTCTATTTTGGGTAGAATCATTTGTTATTTACTCAAATTTCACGTTTCTCGTGATGTGTTATCTTGTGGCCTCAAAATTAATTATTGCAGAGTTTCTGCTGCTATTGTAGTTTTTAACAGCTTATAGGAGGCAGCACATTCTGTACTTGGATATTGAGAAAAAACTAAAGATTTTTCATCCGTTTTGTTCTGATTGTTCTCTATTGTGAGTAGCGCAACAGCCTTAGGGGGTGTTTTGGTTGCGGATAAAGTTAGATAGGAATTGTAATGCAACAATTGTAACACATGGATAAATAATCATTTCATTATCTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E309704" ref_strand="+" ref_description="SGN-E309704 	[cLEY-26-E2]">
      <seq>atttgttgccataccgtgaatgtggggtgttattatggtgtaggaattccattgggatgtcttcttggccttcaaatatgacccttggtgcctaagggtatatggacctgggatgattggagggacctgtcatgccaacccttcattctgatttggttcacattccgtaccagattggaacaaagaggtagagaaagctaaagaacgtttagaccaaatgggagaatgtaaaagaacctctaagcaagaaatgaaggtggcgaagaagtcaaccaccagttcaccataagcgtatcgaccaaaagagaattgaaatccgttatgaaataatttacctatttctgattttcgagaaaacagatgaaagtaattattcaaatattaagtgatttaatagttttctactttagctgatattcaaaatattcgattcaagtaaacaaagagatatggttgaattaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="158494" stop="157038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="158194" g_stop="158104" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.890"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158103" i_stop="157997" i_length="107">
            <donor d_prob="0.996" d_score="0.87"/>
            <acceptor a_prob="0.999" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="157996" g_stop="157910" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="187" r_length="91" r_score="0.897"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="157909" i_stop="157612" i_length="298">
            <donor d_prob="0.795" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="157611" g_stop="157335" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="468" r_length="281" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E309704" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309704" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="158194" e_stop="158104"/>
          <exon e_start="157996" e_stop="157910"/>
          <exon e_start="157611" e_stop="157335"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTTGC-ATA-CGTGAATGTGGGGTGTTATTATGGTGTAGGAATTCCATTGGGATGTCTTCTTGG-CTTCAAATATGA-CCTTGGTG-CTAAGGTTTCTCAATTACACACAACCTTCTATATTATATCTCTAAATATTTTATAATATACACACATATAATATAAACGTGTATTAATTTTTAATTGGAAATTAAATGGCAGGGTATATGGA-CTGGGATGATTGGAGGGA-CTGTCATG-CAAACCTTCATTCTGATTTGGTTCACATTCCGTA-CAGATTGGAACAAAGAGGTGCCTAACTCACTTCTTCTCAACTACTCTCTCTGCCTGACTCTGTCCGTTTTTGCTTCTCTAATATTAATTTAACAAACCTTTAAGGAGCAATAAATAAAATGACAATTTCACTTTATTACTCTGGAAATATAATAAATTCAACATTGAGAAATGACTTTAGTATGATGGACAAATGAAAGTGGACGGACGGAGAATGACTTCTAAAGTTAATAAGTCAATAGTTCTTGGGATGCACAAAGAAGTTTGTAAATAAATTTGGATCCCTTTTTTTGTAATTTTTTTTTTTAATTTTCAGGTAGAGAAAGCTAAAGAACGTTTAGA-CAAATGGGAGAATGTAAAAGAACCTCTAAGCAAGAAATGAAGGTGGCGAAGAAGTCAA-CAACAGTTCA-CATAAGCGTATCGACCAAAAGAGAATTGAAATCCGTTATGAAATAATTTA-CTATTTCTGATTTTCGAGAAAACAGATGAAAGTAATTATTCAAATATTAAGTGATTTAATAGTTTTCTACTTTAGCTGATATTCAAAATATTCGATTCAAGTAAACAAAGAGATATGGTTGAATTAAAAAGGA</genome_strand>
        <mrna_strand>ATTTGTTGCCATACCGTGAATGTGGGGTGTTATTATGGTGTAGGAATTCCATTGGGATGTCTTCTTGGCCTTCAAATATGACCCTTGGTGCCTAAG...........................................................................................................GGTATATGGACCTGGGATGATTGGAGGGACCTGTCATGCCAACCCTTCATTCTGATTTGGTTCACATTCCGTACCAGATTGGAACAAAGAG..........................................................................................................................................................................................................................................................................................................GTAGAGAAAGCTAAAGAACGTTTAGACCAAATGGGAGAATGTAAAAGAACCTCTAAGCAAGAAATGAAGGTGGCGAAGAAGTCAACCACCAGTTCACCATAAGCGTATCGACCAAAAGAGAATTGAAATCCGTTATGAAATAATTTACCTATTTCTGATTTTCGAGAAAACAGATGAAAGTAATTATTCAAATATTAAGTGATTTAATAGTTTTCTACTTTAGCTGATATTCAAAATATTCGATTCAAGTAAACAAAGAGATATGGTTGAATTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E545081" ref_strand="+" ref_description="SGN-E545081 	[TUS-67-L23]">
      <seq>ggcatttgttgcatacgtgaatgtggggtgttattatggtgtaggaattccattgggatgtcttcttggcttcaaatatgaccttggtgctaagggtatatggactgggatgattggagggactgtcatgcaaaccttcattctgatttggttcacattccgtacagattggaacaaagaggtagagaaagctaaagaacgtttagacaaatgggagaatgtaaaagaacctctaagcaagaaatgaaggtggcgaagaagtcaacaacagttcacataagcgtatcgaccaaaagagaattgaaatccgttatgaaataatttactatttctgattttcgagaaaacagatgaaagtaattattcaaatattaagtgatttaatagttttctactttagctgatattcaaaatattcgattcaagtaaacaaagagatatggttgaattcncaaacagcaaaaaaaccaaatctaaaacaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="158497" stop="157043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="158197" g_stop="158104" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158103" i_stop="157997" i_length="107">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="157996" g_stop="157910" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="181" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="157909" i_stop="157612" i_length="298">
            <donor d_prob="0.795" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="157611" g_stop="157346" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="447" r_length="266" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="476" polyA_stop="493"/>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E545081" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="158197" e_stop="158104"/>
          <exon e_start="157996" e_stop="157910"/>
          <exon e_start="157611" e_stop="157346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCATTTGTTGCATACGTGAATGTGGGGTGTTATTATGGTGTAGGAATTCCATTGGGATGTCTTCTTGGCTTCAAATATGACCTTGGTGCTAAGGTTTCTCAATTACACACAACCTTCTATATTATATCTCTAAATATTTTATAATATACACACATATAATATAAACGTGTATTAATTTTTAATTGGAAATTAAATGGCAGGGTATATGGACTGGGATGATTGGAGGGACTGTCATGCAAACCTTCATTCTGATTTGGTTCACATTCCGTACAGATTGGAACAAAGAGGTGCCTAACTCACTTCTTCTCAACTACTCTCTCTGCCTGACTCTGTCCGTTTTTGCTTCTCTAATATTAATTTAACAAACCTTTAAGGAGCAATAAATAAAATGACAATTTCACTTTATTACTCTGGAAATATAATAAATTCAACATTGAGAAATGACTTTAGTATGATGGACAAATGAAAGTGGACGGACGGAGAATGACTTCTAAAGTTAATAAGTCAATAGTTCTTGGGATGCACAAAGAAGTTTGTAAATAAATTTGGATCCCTTTTTTTGTAATTTTTTTTTTTAATTTTCAGGTAGAGAAAGCTAAAGAACGTTTAGACAAATGGGAGAATGTAAAAGAACCTCTAAGCAAGAAATGAAGGTGGCGAAGAAGTCAACAACAGTTCACATAAGCGTATCGACCAAAAGAGAATTGAAATCCGTTATGAAATAATTTACTATTTCTGATTTTCGAGAAAACAGATGAAAGTAATTATTCAAATATTAAGTGATTTAATAGTTTTCTACTTTAGCTGATATTCAAAATATTCGATTCAAGTAAACAAAGAGATATGGTTGA</genome_strand>
        <mrna_strand>GGCATTTGTTGCATACGTGAATGTGGGGTGTTATTATGGTGTAGGAATTCCATTGGGATGTCTTCTTGGCTTCAAATATGACCTTGGTGCTAAG...........................................................................................................GGTATATGGACTGGGATGATTGGAGGGACTGTCATGCAAACCTTCATTCTGATTTGGTTCACATTCCGTACAGATTGGAACAAAGAG..........................................................................................................................................................................................................................................................................................................GTAGAGAAAGCTAAAGAACGTTTAGACAAATGGGAGAATGTAAAAGAACCTCTAAGCAAGAAATGAAGGTGGCGAAGAAGTCAACAACAGTTCACATAAGCGTATCGACCAAAAGAGAATTGAAATCCGTTATGAAATAATTTACTATTTCTGATTTTCGAGAAAACAGATGAAAGTAATTATTCAAATATTAAGTGATTTAATAGTTTTCTACTTTAGCTGATATTCAAAATATTCGATTCAAGTAAACAAAGAGATATGGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E269412" ref_strand="+" ref_description="SGN-E269412 	[cLEM-2-G21]">
      <seq>atgagtgtaaggggtcaagtgaacctttaatagaagagaaagaagcaacagtggaacatttaagctccgagcttgaagacatattgttggatgcaagattgtcgcattttcagcggcttagacgggcatctgccgttgaattcagtaatctgtttcgactagcagctccagcaatcattgtttatttgctcaacaatgttacgtctgtgtctactcaaatgttctgtggtcatcttggtaatcttgaacttgctgctgcttcacttggcaatgaaggtattcaactcttggcttatggcgtcatgttagggatggggagtgcagtggagacactatgtgggcaagcatatggagctcacaagtatgaaacattgggaatatatcttcaaagatcgacaattctgcttatgttatctggaataccgattatggtggcttacttatattcaaagccaattttaatcttactaggagaatcagagaaagttgcatcagcagctgcattattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="169471" stop="168000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="169171" g_stop="168867" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="168866" i_stop="168504" i_length="363">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="168503" g_stop="168300" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="509" r_length="204" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E269412" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="169171" e_stop="168867"/>
          <exon e_start="168503" e_stop="168300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGTGTAAGGGGTCAAGTGAACCTTTAATAGAAGAGAAAGAAGCAACAGTGGAACATGTAAGCTCCGAGCTTGAAGACATATTGTTGGACGCAAGATTGTCGCATTTTCAGCGGCTTAGACGGGCATCTGCCGTTGAATTCAGTAATCTGTTTCGACTAGCAGCTCCAGCAATCATTGTTTATTTGCTCAACAATGTTACGTCTGTGTCTACTCAAATATTCTGTGGTCATCTTGGTAATCTTGAACTTGCTGCTGCTTCACTTGGCAATGAAGGTATTCAACTCTTGGCTTATGGCGTCATGGTAAGATTCGTGTCAACTTTATTTGTACTTGCTCTCTTGAGGATTACCTTTTATGTTTGTTAATCGACCTAGCATATGAACAGAGCTTCTTTAAATTGCTCGAATTTCATATACTTACTTTGTTCGAACTTATGTCATATATTGTTCAGGTTTTGAGAGTCGAATACTTCAATCCTCTTAATTTTGAAAATGAAGTCATACATAGAATCTTTGGTTTCTCGAAAAGTGAAATTGTTTTGACTCTCGAAATCTGAAAATTTACACATAAATTGGGATGGAATGAGTTATAGTTTTTAATTTTACTGAGGAATAGTAATGGTTGTAGACATAATGATGTGTTATTTATCAATTTTGTTGGAGCAGTTAGGGATGGGGAGTGCAGTGGAGACACTATGTGGGCAAGCATATGGAGCTCACAAGTATGAAACATTGGGAATATATCTTCAAAGATCGACAATTCTGCTTATGTTATCTGGAATACCGATTATGGTGGCTTACTTATATTCAAAGCCAATTTTAATCTTACTAGGAGAATCAGAGAAAGTTGCATCAGCAGCTGCATTATTC</genome_strand>
        <mrna_strand>ATGAGTGTAAGGGGTCAAGTGAACCTTTAATAGAAGAGAAAGAAGCAACAGTGGAACATTTAAGCTCCGAGCTTGAAGACATATTGTTGGATGCAAGATTGTCGCATTTTCAGCGGCTTAGACGGGCATCTGCCGTTGAATTCAGTAATCTGTTTCGACTAGCAGCTCCAGCAATCATTGTTTATTTGCTCAACAATGTTACGTCTGTGTCTACTCAAATGTTCTGTGGTCATCTTGGTAATCTTGAACTTGCTGCTGCTTCACTTGGCAATGAAGGTATTCAACTCTTGGCTTATGGCGTCATG...........................................................................................................................................................................................................................................................................................................................................................................TTAGGGATGGGGAGTGCAGTGGAGACACTATGTGGGCAAGCATATGGAGCTCACAAGTATGAAACATTGGGAATATATCTTCAAAGATCGACAATTCTGCTTATGTTATCTGGAATACCGATTATGGTGGCTTACTTATATTCAAAGCCAATTTTAATCTTACTAGGAGAATCAGAGAAAGTTGCATCAGCAGCTGCATTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E336939" ref_strand="+" ref_description="SGN-E336939 	[cTOE-5-M1]">
      <seq>taagtgttactaaaataataaaatagtagtaatactttatgtataatatactaataaagttcagtgcatataaaatgtaaaataaacaaaattaatttaagaaagattttcaacttttgtccgtgtagttcaattatttaccattagactttaatgtacaaatatttgttctttcaaatcagatcgagggggctaaggcctaacagtctagtgaagttgtcagtgggtcgcttcgagcaagatattgcttataccaataggtcacaccatagttacagtatttctatctttaattttttgcctagtaaataagctatcttgattcgtcttcgactttgatttattgatatttattattggaaaacatggatgagtgtaaggggtcaagtgaacctttaatagaagagaaagaagcaacagtggaacatgtaagctccgagcttgaagacatattgttggatgcaagattgtcgcattttcagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="169841" stop="168757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="169541" g_stop="169057" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E336939" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336939" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="169541" e_stop="169057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGTGTTACTAAAATAATAAAATAGTAGTAATACTTTATGTATAATATACTAATAAAGTTCAGTGCATATAAAATGTAAAATAAACAAAATTAATTTAAGAAAGATTTTCAACTTTTGTCCGTGTAGTTCAATTATTTACCATTAGACTTTAATGTACAAATATTTGTTCTTTCAAATCAGATCGAGGGGGCTAAGGCCTAACAGTCTAGTGAAGTTGTCAGTGGGTCGCTTCGGAGCAAGATATTGCTTATACCAATAGGTCACACCATAGTTACAGTATTTCTATCTTTAATTTTTTGCCTAGTAAATAAGCTATCTTGATTCGTCTTCGACTTTGATTTATTGATATTTATTATTGGAAAACATGGATGAGTGTAAGGGGTCAAGTGAACCTTTAATAGAAGAGAAAGAAGCAACAGTGGAACATGTAAGCTCCGAGCTTGAAGACATATTGTTGGACGCAAGATTGTCGCATTTTCAGCG</genome_strand>
        <mrna_strand>TAAGTGTTACTAAAATAATAAAATAGTAGTAATACTTTATGTATAATATACTAATAAAGTTCAGTGCATATAAAATGTAAAATAAACAAAATTAATTTAAGAAAGATTTTCAACTTTTGTCCGTGTAGTTCAATTATTTACCATTAGACTTTAATGTACAAATATTTGTTCTTTCAAATCAGATCGAGGGGGCTAAGGCCTAACAGTCTAGTGAAGTTGTCAGTGGGTCGCTTC-GAGCAAGATATTGCTTATACCAATAGGTCACACCATAGTTACAGTATTTCTATCTTTAATTTTTTGCCTAGTAAATAAGCTATCTTGATTCGTCTTCGACTTTGATTTATTGATATTTATTATTGGAAAACATGGATGAGTGTAAGGGGTCAAGTGAACCTTTAATAGAAGAGAAAGAAGCAACAGTGGAACATGTAAGCTCCGAGCTTGAAGACATATTGTTGGATGCAAGATTGTCGCATTTTCAGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E300334" ref_strand="+" ref_description="SGN-E300334 	[cLEW-17-F3]">
      <seq>ttagactttaatgtacaaatatttgttctttcaaatcagatcgagggggctaaggcctaacagtctagtgaagttgtcagtgggtcgcttcgagcaagatattgcttataccaataggtcacaccatagttacagtatttctatctttaattttttgcctagtaaataagctatcttgattcgtcttcgactttgatttattgatatttattattggaaaacatggatgagtgtaaggggtcaagtgaacctttaatagaagagaaagaagcaacagtggaacatgtaagctccgagcttgaagacatattgttggatgcaagattgtcgcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="169698" stop="168763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="169398" g_stop="169063" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E300334" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>336</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="169398" e_stop="169063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGACTTTAATGTACAAATATTTGTTCTTTCAAATCAGATCGAGGGGGCTAAGGCCTAACAGTCTAGTGAAGTTGTCAGTGGGTCGCTTCGGAGCAAGATATTGCTTATACCAATAGGTCACACCATAGTTACAGTATTTCTATCTTTAATTTTTTGCCTAGTAAATAAGCTATCTTGATTCGTCTTCGACTTTGATTTATTGATATTTATTATTGGAAAACATGGATGAGTGTAAGGGGTCAAGTGAACCTTTAATAGAAGAGAAAGAAGCAACAGTGGAACATGTAAGCTCCGAGCTTGAAGACATATTGTTGGACGCAAGATTGTCGCATTT</genome_strand>
        <mrna_strand>TTAGACTTTAATGTACAAATATTTGTTCTTTCAAATCAGATCGAGGGGGCTAAGGCCTAACAGTCTAGTGAAGTTGTCAGTGGGTCGCTTC-GAGCAAGATATTGCTTATACCAATAGGTCACACCATAGTTACAGTATTTCTATCTTTAATTTTTTGCCTAGTAAATAAGCTATCTTGATTCGTCTTCGACTTTGATTTATTGATATTTATTATTGGAAAACATGGATGAGTGTAAGGGGTCAAGTGAACCTTTAATAGAAGAGAAAGAAGCAACAGTGGAACATGTAAGCTCCGAGCTTGAAGACATATTGTTGGATGCAAGATTGTCGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-0WnINt/sgn_ests_tomato_potato" ref_id="SGN-E622034" ref_strand="+" ref_description="SGN-E622034 	[72397]">
      <seq>acagaaagccaatgttagcaaaaatatatacaaactttgtcacattagcctcaaggacttttctgtgcaagtcgcacccgaagtttctgggtgtcttttgcctagtctaccatcagatgctgtacttgaccaaagttcggggatcagcttcgtctgtgatttaaacgataacattccagccccttggccatctctctctcacttaccagtttcgtcatgcaataaaactatgaaaattcctgcgcttcctgcggcagcatctggccagatcagtctgaacagcttaagcatcgggtctcatctgcgtctcttggccttgacggctcttggaagcctcttttatacttaatgctgccattcctgctcaattaacctttattgcgagcaaatctcatgaaatgatgatacaagtaacgaatatctttaagttaatagtgctgagggttctgattttcctcaagtctaatgtgtacaaaagcaggtggaaaatcatgatccggagtaagaatcccactcggagaagattccaagtttgagttttccgaccctatctgttcctcattcttgcgtaatgaggaaattttgtaaaagtaattcaggaggaggttgaattccatgtaattatttatttccacttagaaaaaccctgtcttgtattgtatatgtctgaaattcaaagtcctgagaaattattgtgtcattagctaatgcattagggtaggtctctaggggttggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-jRrpd/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0204D01.1" temp_strand="-" temp_description="C02HBa0204D01.1  submitted_to_sgn_as:C02HBa0204D01">
        <position start="174456" stop="171004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="174156" g_stop="174086" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="174085" i_stop="173964" i_length="122">
            <donor d_prob="0.918" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="173963" g_stop="173952" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="83" r_length="12" r_score="0.917"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="173951" i_stop="173386" i_length="566">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.681" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="173385" g_stop="173242" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="227" r_length="144" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="173241" i_stop="173144" i_length="98">
            <donor d_prob="0.993" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="173143" g_stop="173099" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="272" r_length="45" r_score="0.933"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="173098" i_stop="171745" i_length="1354">
            <donor d_prob="0.999" d_score="0.93"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="171744" g_stop="171314" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="716" r_length="444" r_score="0.875"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0204D01.1" gen_strand="-" ref_id="SGN-E622034" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0204D01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E622034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="174156" e_stop="174086"/>
          <exon e_start="173963" e_stop="173952"/>
          <exon e_start="173385" e_stop="173242"/>
          <exon e_start="173143" e_stop="173099"/>
          <exon e_start="171744" e_stop="171314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAAAGCCAATGTGAGCAAAAATATATACAAACTTTGTCACATTAGCCTCAAGGACTTCTCTGTGCAAGGTAATTTATTATTTAGATGCCGCTTTTTGAGCATTTTGCTGCCTTCAAATCTACCAAGCTAACTTGGAATTTCTATTTTGTATCTCCATCTGTTCTGGGTTCTCTTCAAATGACTACAACAGTTGCACCCGAAGGTAATTTACCTACTTGTCTATTTCTTAATTCATCTGCATGCCCTGTGTTTTCTTCGGTCCTTTATTTATCACTAGAATTCGAAGCATCTGCTCTACGAAAGAAATATAATTTTGAAACCCCCACCCCCCACTTCCTCTTAATGACTTACGTTGAAGTATCAGAAATTCAATCATGGGACGTGGAAACAGTTGGTTCAATCACATGATAATGGATTAAAAGAATATTATTAGTCAATATTGCACTGGACGTATCATTGAAGATCAATGTAGTGGACAAAGGGGACAACTTTTCACTGTACAGTAGTCACAGTGACTTCATGTCTGTAAAGTTTGGAAATTACACTGTCGTTTCATGCCTGAGAGAAGAAATCTACATTTTGTCTTGGAAAACATTGTTTTTGCCTTGGTATTTATTACATGCATCAAATTGTCAAACTACTACATGTTAATTTTCTTCCTTTGGATGAGGTTCCTTGTGTGTTATATCATGTTTTTTGCCCATGTCAGTTTCTTCGTGATAGTTTTAGTTGATTAGTTTTTTTTTCTTGCTCTTTTTGCGGGAGTAGTTTCTGGGTGTCTTTTGCCTAGTCTACCATCAGATGCTGTACTTGACCAAAGTTCGGGGATCAGCTTCGTCTGTGATTTGAACGATAACATTCCAGCCCCTTGGCCATCTCTCTCTCACTTACCAGTTTCCTCATGCAATAAATGTATGTCAGATCTCTTACTTCTTATTATATCCAGTGACCAAAGTCCATTTTCTTGTATAACTAACTGCTGATCTTATTACTACTTTCTGCTATTGCAGCTGTGAAAATTCCTGCACTTCCTGCGGCAGCATCTGGCCAGCTCAGTAAGACTATCTACCTTTCTCATTAACAGTTTCATAGTATGCTGGTTTCTTTTTGTGCTTCCATTAGTAATAAGTTTCAACTTCTCCGGATATGGACATGAGGGGTAAAATAAAACCTGGTAGCTAAAATAGTTTTCAGTTTCACATCATATATCTTGATGGATACATTTATCATTGTTAAGTCCCTCATTTGTTGATAATTCTTTTTCTTATGAGCTTGATTTGGCGTAAGTTAGGCCAGTGACCATTTCTTGACATGGTATGAGAGCCCGACCAATCGATCCTTATTGTGTTTCTCAAAGTTGTGCCTCGATCCATGTTCTACTTGAGTCTTGAGCATGTCGGGGAGTGTTAGCTCCCATATTGGTTGAGGAATGAGTTGTGGCCTCCTTATATTGTTTTTGACAATCCTCCCTTCATGAACTAGTTTTTGGGGTTGAGTTATATGTGTAGTTGTATAAGATACAAGGATCGTGATTGGGTGATATTTTTGAGTATTAGAAGTTGCAACAATAGCTAAATTTTGATTGAAGCTAGTGATTGGAGTAAGAATTGGAATATTTGTAAAGAAAAGTGAACTTATGCTCTTAAGTAACGGTACGCTGGAATATTTATTTCATGAAACATTTCCGGCTATCCCAAAGTGGAGATAGTTATCATGCATGTTTTAGTTGAAACAAACATGAAGATTTACTGTTTCCATTCCAATTATTTGTCTTACTTCCCTTTTTTAGTCCTTTTTTAAATAGATCGATTCTTTCCTGTTTTAGCAACTTTCTTAGTTTCTTCATGACATGCTTAAGACCTCAAGATTGTAGGGCATTTGGTACATTCAACATATCTTTTGTTTAAGACCACAAGATTCAAAAGTTCTTTAATTTCTTAAACTGTTGTCAAGTCAAAACCAAAAAAACAATTAGAAACAGAGGAAGTAACTTCTTTGAAATACCCTGGTGTGAGATCAAGAATTTTGTTGACCAATGGTAATTAATATGTTTACATAGATGCATAACGGAAGGATGGATATGTAGAACATCATGAAGCATCATTTTATTAGTGAAGATACGTCAGGCCTCGACTTCCATTTAGTTGCTTTGTACCATTTTTAGTATGTACTATTTATAGTATATTCTGAGCACTGTTGTCTGAAAGCAAAATTAAAGCTACTTTGGAGGTTCAAGAGAAAAGGTTTAATAAACAAATAAGAGTTCAAATGCCATCTATCTCTACTCTAAAATGAATCTATACTAATGAATCTATACTTAGTCGCAGATTTAGTTTGAGAAAGCTTGATTGTTTATCTTCTATTAAGGTTGATCTACTTCTCACTGATACGTTCTCGTTAATTTGTCAGGTCTGAATAGCTTGAGCATCGGGTCTCATCTGCGTCTCTTAGCCTTGACGGCTCTTGGAAGCCTCTTTTATACTTAATGCTGCCACTCCTGCTCAATTAACCTTGATGGCGAGCAAATCTTATGAAATAATGATACAAGTAACGAATA----TAAGTTAATGGTGCTGAAGGTTCTGATTTTCCTCAAGTCTAATGTGTACAAAAGC---TGGAAAATCATGATCCAGAGTAAGAATGCCACTCGGAGAAGATTACAAGTTTGAGTTTTCCTACCATATTTGTTCCTCATTGTTGCGTAATAAGAAAATTTTGTAAAAGTACTTCAGGAGGAGGTTAAATTCCATGT-A--A-TTATTTCCACTTAGAAATA-CC-ATCTTGTATTGTATATGTTTGATACTCAAAGTCCTGAAAAATTATTGTGTCATTAACTAATGCATTAG</genome_strand>
        <mrna_strand>ACAGAAAGCCAATGTTAGCAAAAATATATACAAACTTTGTCACATTAGCCTCAAGGACTTTTCTGTGCAAG..........................................................................................................................TCGCACCCGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGGGTGTCTTTTGCCTAGTCTACCATCAGATGCTGTACTTGACCAAAGTTCGGGGATCAGCTTCGTCTGTGATTTAAACGATAACATTCCAGCCCCTTGGCCATCTCTCTCTCACTTACCAGTTTCGTCATGCAATAAAA..................................................................................................CTATGAAAATTCCTGCGCTTCCTGCGGCAGCATCTGGCCAGATCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGAACAGCTTAAGCATCGGGTCTCATCTGCGTCTCTTGGCCTTGACGGCTCTTGGAAGCCTCTTTTATACTTAATGCTGCCATTCCTGCTCAATTAACCTTTATTGCGAGCAAATCTCATGAAATGATGATACAAGTAACGAATATCTTTAAGTTAATAGTGCTGAGGGTTCTGATTTTCCTCAAGTCTAATGTGTACAAAAGCAGGTGGAAAATCATGATCCGGAGTAAGAATCCCACTCGGAGAAGATTCCAAGTTTGAGTTTTCCGACCCTATCTGTTCCTCATTCTTGCGTAATGAGGAAATTTTGTAAAAGTAATTCAGGAGGAGGTTGAATTCCATGTAATTATTTATTTCCACTTAGAAAAACCCTGTCTTGTATTGTATATGTCTGAAATTCAAAGTCCTGAGAAATTATTGTGTCATTAGCTAATGCATTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>151</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="4347" PGL_stop="5051"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4347" e_stop="4588"/>
            <exon e_start="4674" e_stop="4791"/>
            <exon e_start="4953" e_stop="5051"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.996"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="4347" e_stop="4588" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="4589" i_stop="4673" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4674" e_stop="4791" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="4792" i_stop="4952" i_length="161"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4953" e_stop="5051" e_length="99"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4347" stop="4588"/>
              <exon start="4674" stop="4791"/>
              <exon start="4953" stop="5051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265216" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAAGGTATTCAAGATGTTTAATAACCACCAGCACTTGCTCGATATATCGTCCTCAGCTCAACGAACACCTGATAACGAGTTGGATTTCATTCGTGATGAAGAGTTTGATAGCAACTCTGGTGCTGATAACATGGAAGCTCCCAATTCAGGTGATGACGATCAAGCTGATCCAAACCAACCTCCAAACAAGAAGAAGCGTTATCATCGCCACACTCAGAATCAGATTCAGGAAATGGAGTC : CTTTTACAAGGAATGCAATCATCCAGATGACAAGCAAAGGAAGGAATTGGGAAGAAGACTTGGTTTGGAGCCATTACAAGTGAAATTTTGGTTCCAGAACAAGCGTACTCAGATGAAG : GCTCAACATGAGCGATGTGAGAACACACAGTTGAGGAATGAAAATGAGAAGCTTCGCGCTGAGAACATAAGGTACAAAGAAGCTTTGAGTAATGCAGCA</gDNA_template>
            <first_frame> E  K  V  F  K  M  F  N  N  H  Q  H  L  L  D  I  S  S  S  A  Q  R  T  P  D  N  E  L  D  F  I  R  D  E  E  F  D  S  N  S  G  A  D  N  M  E  A  P  N  S  G  D  D  D  Q  A  D  P  N  Q  P  P  N  K  K  K  R  Y  H  R  H  T  Q  N  Q  I  Q  E  M  E  S :   F  Y  K  E  C  N  H  P  D  D  K  Q  R  K  E  L  G  R  R  L  G  L  E  P  L  Q  V  K  F  W  F  Q  N  K  R  T  Q  M  K  :  A  Q  H  E  R  C  E  N  T  Q  L  R  N  E  N  E  K  L  R  A  E  N  I  R  Y  K  E  A  L  S  N  A  A </first_frame>
            <second_frame>  R  R  Y  S  R  C  L  I  T  T  S  T  C  S  I  Y  R  P  Q  L  N  E  H  L  I  T  S  W  I  S  F  V  M  K  S  L  I  A  T  L  V  L  I  T  W  K  L  P  I  Q  V  M  T  I  K  L  I  Q  T  N  L  Q  T  R  R  S  V  I  I  A  T  L  R  I  R  F  R  K  W  S   : P  F  T  R  N  A  I  I  Q  M  T  S  K  G  R  N  W  E  E  D  L  V  W  S  H  Y  K  *  N  F  G  S  R  T  S  V  L  R  *  R :   L  N  M  S  D  V  R  T  H  S  *  G  M  K  M  R  S  F  A  L  R  T  *  G  T  K  K  L  *  V  M  Q   </second_frame>
            <third_frame>   E  G  I  Q  D  V  *  *  P  P  A  L  A  R  Y  I  V  L  S  S  T  N  T  *  *  R  V  G  F  H  S  *  *  R  V  *  *  Q  L  W  C  *  *  H  G  S  S  Q  F  R  *  *  R  S  S  *  S  K  P  T  S  K  Q  E  E  A  L  S  S  P  H  S  E  S  D  S  G  N  G  V  :  L  L  Q  G  M  Q  S  S  R  *  Q  A  K  E  G  I  G  K  K  T  W  F  G  A  I  T  S  E  I  L  V  P  E  Q  A  Y  S  D  E   : G  S  T  *  A  M  *  E  H  T  V  E  E  *  K  *  E  A  S  R  *  E  H  K  V  Q  R  S  F  E  *  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4347" stop="4588"/>
                    <exon start="4674" stop="4791"/>
                    <exon start="4953" stop="5051"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKVFKMFNNHQHLLDISSSAQRTPDNELDFIRDEEFDSNSGADNMEAPNSGDDDQADPNQPPNKKKRYHRHTQNQIQEMESFYKECNHPDDKQRKELGRRLGLEPLQVKFWFQNKRTQMKAQHERCENTQLRNENEKLRAENIRYKEALSNAA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="19198" PGL_stop="13872"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19198" e_stop="19111"/>
            <exon e_start="16555" e_stop="15830"/>
            <exon e_start="14181" e_stop="13872"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.743" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.910" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19198" e_stop="19111" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.743">
            <gDNA_intron_boundary i_start="19110" i_stop="16556" i_length="2555"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16555" e_stop="15830" e_length="726"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.910">
            <gDNA_intron_boundary i_start="15829" i_stop="14182" i_length="1648"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="14181" e_stop="13872" e_length="310"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19198" stop="19111"/>
              <exon start="16555" stop="16071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19197" stop="19111"/>
              <exon start="16555" stop="16192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19186" stop="19111"/>
              <exon start="16555" stop="16188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19147" stop="19111"/>
              <exon start="16555" stop="16388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19129" stop="19111"/>
              <exon start="16555" stop="16077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202048" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16544" stop="16144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16186" stop="15830"/>
              <exon start="14181" stop="13872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371401" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16125" stop="15830"/>
              <exon start="14181" stop="13872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273301" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16015" stop="15830"/>
              <exon start="14181" stop="13872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271449" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACAATACCCCTTTCTCTCTCTTATTCTTGATTACCTGCAACACTCTTCCCATTATTCAAAGTCCCGTCTTTCACCTTCTTCTTTACC : TGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAG : ATCCATATATCGTAAGGGGTCCAGATACGTAGCTACAATATTAGGCCAAACAGCTAGGAATATGTAATGAAGCTGCTGTCTCAGTCCCTAGCTATTTACTTTCATTCAAAGTTAATAACTACAAGACACTGGTCTGGACCACTTACCATCAACATGTTAACTATTTGTGTTCCTTTTGTGAGCAGCTAGAGGAGAAGTAGATGATCATCAACAGTGAAACTAATTGTACTATAAAAAGTGGGGAGACTATCGATTAATGCATTTGTACTACTTTGTGTTTTATGTCATTCTGGTCGTCTATTTGATTTGT</gDNA_template>
            <first_frame> D  N  T  P  F  S  L  L  F  L  I  T  C  N  T  L  P  I  I  Q  S  P  V  F  H  L  L  L  Y   : L  T  K  T  S  I  F  A  R  V  P  S  S  S  P  T  F  L  T  K  V  K  I  L  L  P  T  P  M  E  V  K  L  W  N  D  K  R  E  R  E  M  Y  E  N  F  A  E  L  F  A  I  I  K  A  T  E  K  L  E  K  A  Y  V  R  D  I  I  S  P  A  E  Y  E  A  E  C  Q  K  L  I  A  H  F  K  T  L  S  S  T  L  K  D  T  V  P  S  I  E  R  F  H  D  T  Y  K  M  D  C  P  A  A  L  N  R  L  V  T  S  G  V  P  A  T  V  E  H  R  A  A  A  A  T  S  S  A  S  S  A  S  V  V  A  E  C  V  Q  N  F  I  T  A  M  D  S  L  K  L  N  M  I  A  V  D  Q  V  H  P  L  L  S  D  L  S  S  S  L  N  K  L  L  I  L  P  S  D  F  E  G  K  T  K  M  R  E  W  L  S  R  L  S  K  M  G  A  A  D  E  L  T  E  Q  Q  A  R  Q  L  H  F  D  L  E  S  S  Y  N  S  F  M  A  A  L  P  S  A  G  T  *  L  L  I  S   : D  P  Y  I  V  R  G  P  D  T  *  L  Q  Y  *  A  K  Q  L  G  I  C  N  E  A  A  V  S  V  P  S  Y  L  L  S  F  K  V  N  N  Y  K  T  L  V  W  T  T  Y  H  Q  H  V  N  Y  L  C  S  F  C  E  Q  L  E  E  K  *  M  I  I  N  S  E  T  N  C  T  I  K  S  G  E  T  I  D  *  C  I  C  T  T  L  C  F  M  S  F  W  S  S  I  *  F   </first_frame>
            <second_frame>  T  I  P  L  S  L  S  Y  S  *  L  P  A  T  L  F  P  L  F  K  V  P  S  F  T  F  F  F  T  :  *  Q  R  L  A  S  L  R  V  S  H  P  L  L  Q  P  F  *  Q  R  S  K  Y  C  C  Q  L  P  W  R  L  N  Y  G  M  I  S  G  K  E  K  C  T  K  T  L  Q  S  S  L  L  *  *  R  Q  P  K  S  S  R  R  L  M  F  V  T  S  F  H  Q  L  N  M  K  L  N  A  R  S  *  L  L  I  S  K  L  Y  L  P  R  *  K  I  P  Y  L  A  L  S  D  F  M  T  P  T  K  W  I  A  L  L  P  *  T  G  L  *  P  L  G  C  L  P  L  W  S  T  V  P  P  L  L  H  H  L  H  P  Q  L  L  L  W  L  S  V  C  R  T  S  S  L  R  W  T  L  *  S  *  I  *  L  L  *  T  R  S  I  P  F  C  Q  T  Y  H  L  P  L  I  N  F  *  Y  F  H  L  I  L  R  G  R  Q  R  *  E  S  G  S  Q  G  C  Q  K  W  E  L  Q  M  S  *  Q  N  S  R  P  V  N  S  I  S  I  L  N  H  H  T  I  L  S  W  R  H  C  P  L  L  E  L  N  C  L  F  Q  :  I  H  I  S  *  G  V  Q  I  R  S  Y  N  I  R  P  N  S  *  E  Y  V  M  K  L  L  S  Q  S  L  A  I  Y  F  H  S  K  L  I  T  T  R  H  W  S  G  P  L  T  I  N  M  L  T  I  C  V  P  F  V  S  S  *  R  R  S  R  *  S  S  T  V  K  L  I  V  L  *  K  V  G  R  L  S  I  N  A  F  V  L  L  C  V  L  C  H  S  G  R  L  F  D  L  </second_frame>
            <third_frame>   Q  Y  P  F  L  S  L  I  L  D  Y  L  Q  H  S  S  H  Y  S  K  S  R  L  S  P  S  S  L  P :   D  K  D  *  H  L  C  A  C  P  I  L  F  S  N  L  F  D  K  G  Q  N  I  V  A  N  S  H  G  G  *  T  M  E  *  *  A  G  K  R  N  V  R  K  L  C  R  A  L  C  Y  N  K  G  N  R  K  A  R  E  G  L  C  S  *  H  H  F  T  S  *  I  *  S  *  M  P  E  V  D  C  S  F  Q  N  F  I  F  H  V  E  R  Y  R  T  *  H  *  A  I  S  *  H  L  Q  N  G  L  P  C  C  L  K  P  A  C  D  L  W  G  A  C  H  C  G  A  P  C  R  R  C  Y  I  I  C  I  L  S  F  C  C  G  *  V  C  A  E  L  H  H  C  D  G  L  F  E  A  E  Y  D  C  C  R  P  G  P  S  P  F  V  R  P  I  I  F  P  *  *  T  F  N  T  S  I  *  F  *  G  E  D  K  D  E  R  V  A  L  K  A  V  K  N  G  S  C  R  *  V  D  R  T  A  G  P  S  T  P  F  R  S  *  I  I  I  Q  F  F  H  G  G  T  A  L  C  W  N  L  I  A  Y  F  R :   S  I  Y  R  K  G  S  R  Y  V  A  T  I  L  G  Q  T  A  R  N  M  *  *  S  C  C  L  S  P  *  L  F  T  F  I  Q  S  *  *  L  Q  D  T  G  L  D  H  L  P  S  T  C  *  L  F  V  F  L  L  *  A  A  R  G  E  V  D  D  H  Q  Q  *  N  *  L  Y  Y  K  K  W  G  D  Y  R  L  M  H  L  Y  Y  F  V  F  Y  V  I  L  V  V  Y  L  I  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19198" stop="19111"/>
                    <exon start="16555" stop="15843"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>798</number_coding_nucleotides>
                  <number_encoded_amino_acids>266</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DNTPFSLLFLITCNTLPIIQSPVFHLLLYLTKTSIFARVPSSSPTFLTKVKILLPTPMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYVRDIISPAEYEAECQKLIAHFKTLSSTLKDTVPSIERFHDTYKMDCPAALNRLVTSGVPATVEHRAAAATSSASSASVVAECVQNFITAMDSLKLNMIAVDQVHPLLSDLSSSLNKLLILPSDFEGKTKMREWLSRLSKMGAADELTEQQARQLHFDLESSYNSFMAALPSAGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19198" e_stop="19111"/>
            <exon e_start="16555" e_stop="15494"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.743" e_score="1.000"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19198" e_stop="19111" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.743">
            <gDNA_intron_boundary i_start="19110" i_stop="16556" i_length="2555"/>
          </intron>
          <exon e_serial="2" e_score="0.958">
            <gDNA_exon_boundary e_start="16555" e_stop="15494" e_length="1062"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19198" stop="19111"/>
              <exon start="16555" stop="16071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19197" stop="19111"/>
              <exon start="16555" stop="16192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19186" stop="19111"/>
              <exon start="16555" stop="16188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19147" stop="19111"/>
              <exon start="16555" stop="16388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E566519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19129" stop="19111"/>
              <exon start="16555" stop="16077"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202048" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16544" stop="16144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16270" stop="15607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16270" stop="15649"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16089" stop="15494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544421" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACAATACCCCTTTCTCTCTCTTATTCTTGATTACCTGCAACACTCTTCCCATTATTCAAAGTCCCGTCTTTCACCTTCTTCTTTACC : TGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCATTTTATTCAATGAACTCAGCCCCAGACAAGATGCTTATTTGGTTTGCATATCTTTTCTTTTTGTTACATTAATCATATTACAAGGAAATATTGAGCTGTTAGATATGCTTTTGTAAATTTAAGTGGAAATTTTGATGTAAAACTTAGTTCCATGGTATTAAATCAACTCAAGAAATATCACATTTGTT</gDNA_template>
            <first_frame> D  N  T  P  F  S  L  L  F  L  I  T  C  N  T  L  P  I  I  Q  S  P  V  F  H  L  L  L  Y   : L  T  K  T  S  I  F  A  R  V  P  S  S  S  P  T  F  L  T  K  V  K  I  L  L  P  T  P  M  E  V  K  L  W  N  D  K  R  E  R  E  M  Y  E  N  F  A  E  L  F  A  I  I  K  A  T  E  K  L  E  K  A  Y  V  R  D  I  I  S  P  A  E  Y  E  A  E  C  Q  K  L  I  A  H  F  K  T  L  S  S  T  L  K  D  T  V  P  S  I  E  R  F  H  D  T  Y  K  M  D  C  P  A  A  L  N  R  L  V  T  S  G  V  P  A  T  V  E  H  R  A  A  A  A  T  S  S  A  S  S  A  S  V  V  A  E  C  V  Q  N  F  I  T  A  M  D  S  L  K  L  N  M  I  A  V  D  Q  V  H  P  L  L  S  D  L  S  S  S  L  N  K  L  L  I  L  P  S  D  F  E  G  K  T  K  M  R  E  W  L  S  R  L  S  K  M  G  A  A  D  E  L  T  E  Q  Q  A  R  Q  L  H  F  D  L  E  S  S  Y  N  S  F  M  A  A  L  P  S  A  G  T  *  L  L  I  S  G  D  M  F  V  H  M  W  L  N  S  C  F  F  P  T  K  F  I  L  H  M  M  L  Y  L  V  E  V  L  I  D  E  D  S  E  K  S  L  V  I  Y  G  T  C  V  W  W  F  H  F  I  Q  *  T  Q  P  Q  T  R  C  L  F  G  L  H  I  F  S  F  C  Y  I  N  H  I  T  R  K  Y  *  A  V  R  Y  A  F  V  N  L  S  G  N  F  D  V  K  L  S  S  M  V  L  N  Q  L  K  K  Y  H  I  C  </first_frame>
            <second_frame>  T  I  P  L  S  L  S  Y  S  *  L  P  A  T  L  F  P  L  F  K  V  P  S  F  T  F  F  F  T  :  *  Q  R  L  A  S  L  R  V  S  H  P  L  L  Q  P  F  *  Q  R  S  K  Y  C  C  Q  L  P  W  R  L  N  Y  G  M  I  S  G  K  E  K  C  T  K  T  L  Q  S  S  L  L  *  *  R  Q  P  K  S  S  R  R  L  M  F  V  T  S  F  H  Q  L  N  M  K  L  N  A  R  S  *  L  L  I  S  K  L  Y  L  P  R  *  K  I  P  Y  L  A  L  S  D  F  M  T  P  T  K  W  I  A  L  L  P  *  T  G  L  *  P  L  G  C  L  P  L  W  S  T  V  P  P  L  L  H  H  L  H  P  Q  L  L  L  W  L  S  V  C  R  T  S  S  L  R  W  T  L  *  S  *  I  *  L  L  *  T  R  S  I  P  F  C  Q  T  Y  H  L  P  L  I  N  F  *  Y  F  H  L  I  L  R  G  R  Q  R  *  E  S  G  S  Q  G  C  Q  K  W  E  L  Q  M  S  *  Q  N  S  R  P  V  N  S  I  S  I  L  N  H  H  T  I  L  S  W  R  H  C  P  L  L  E  L  N  C  L  F  Q  V  I  C  L  Y  I  C  G  *  I  L  V  F  F  L  Q  S  L  Y  Y  I  *  C  F  I  W  S  K  C  *  L  T  R  I  Q  K  R  V  L  *  F  M  E  L  V  S  G  G  S  I  L  F  N  E  L  S  P  R  Q  D  A  Y  L  V  C  I  S  F  L  F  V  T  L  I  I  L  Q  G  N  I  E  L  L  D  M  L  L  *  I  *  V  E  I  L  M  *  N  L  V  P  W  Y  *  I  N  S  R  N  I  T  F  V </second_frame>
            <third_frame>   Q  Y  P  F  L  S  L  I  L  D  Y  L  Q  H  S  S  H  Y  S  K  S  R  L  S  P  S  S  L  P :   D  K  D  *  H  L  C  A  C  P  I  L  F  S  N  L  F  D  K  G  Q  N  I  V  A  N  S  H  G  G  *  T  M  E  *  *  A  G  K  R  N  V  R  K  L  C  R  A  L  C  Y  N  K  G  N  R  K  A  R  E  G  L  C  S  *  H  H  F  T  S  *  I  *  S  *  M  P  E  V  D  C  S  F  Q  N  F  I  F  H  V  E  R  Y  R  T  *  H  *  A  I  S  *  H  L  Q  N  G  L  P  C  C  L  K  P  A  C  D  L  W  G  A  C  H  C  G  A  P  C  R  R  C  Y  I  I  C  I  L  S  F  C  C  G  *  V  C  A  E  L  H  H  C  D  G  L  F  E  A  E  Y  D  C  C  R  P  G  P  S  P  F  V  R  P  I  I  F  P  *  *  T  F  N  T  S  I  *  F  *  G  E  D  K  D  E  R  V  A  L  K  A  V  K  N  G  S  C  R  *  V  D  R  T  A  G  P  S  T  P  F  R  S  *  I  I  I  Q  F  F  H  G  G  T  A  L  C  W  N  L  I  A  Y  F  R  *  Y  V  C  T  Y  V  A  E  F  L  F  F  S  Y  K  V  Y  T  T  Y  D  A  L  F  G  R  S  A  D  *  R  G  F  R  K  E  S  C  N  L  W  N  L  C  L  V  V  P  F  Y  S  M  N  S  A  P  D  K  M  L  I  W  F  A  Y  L  F  F  L  L  H  *  S  Y  Y  K  E  I  L  S  C  *  I  C  F  C  K  F  K  W  K  F  *  C  K  T  *  F  H  G  I  K  S  T  Q  E  I  S  H  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19198" stop="19111"/>
                    <exon start="16555" stop="15843"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>798</number_coding_nucleotides>
                  <number_encoded_amino_acids>266</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DNTPFSLLFLITCNTLPIIQSPVFHLLLYLTKTSIFARVPSSSPTFLTKVKILLPTPMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYVRDIISPAEYEAECQKLIAHFKTLSSTLKDTVPSIERFHDTYKMDCPAALNRLVTSGVPATVEHRAAAATSSASSASVVAECVQNFITAMDSLKLNMIAVDQVHPLLSDLSSSLNKLLILPSDFEGKTKMREWLSRLSKMGAADELTEQQARQLHFDLESSYNSFMAALPSAGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="16564" e_stop="15494"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="16564" e_stop="15494" e_length="1071"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16564" stop="15942"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210513" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16544" stop="16144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16270" stop="15607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575429" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16270" stop="15649"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16089" stop="15494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544421" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTTGCAGTGACAAAGACTAGCATCTTTGCGCGTGTCCCATCCTCTTCTCCAACCTTTTTGACAAAGGTCAAAATATTGTTGCCAACTCCCATGGAGGTTAAACTATGGAATGATAAGCGGGAAAGAGAAATGTACGAAAACTTTGCAGAGCTCTTTGCTATAATAAAGGCAACCGAAAAGCTCGAGAAGGCTTATGTTCGTGACATCATTTCACCAGCTGAATATGAAGCTGAATGCCAGAAGTTGATTGCTCATTTCAAAACTTTATCTTCCACGTTGAAAGATACCGTACCTAGCATTGAGCGATTTCATGACACCTACAAAATGGATTGCCCTGCTGCCTTAAACCGGCTTGTGACCTCTGGGGTGCCTGCCACTGTGGAGCACCGTGCCGCCGCTGCTACATCATCTGCATCCTCAGCTTCTGTTGTGGCTGAGTGTGTGCAGAACTTCATCACTGCGATGGACTCTTTGAAGCTGAATATGATTGCTGTAGACCAGGTCCATCCCCTTTTGTCAGACCTATCATCTTCCCTTAATAAACTTTTAATACTTCCATCTGATTTTGAGGGGAAGACAAAGATGAGAGAGTGGCTCTCAAGGCTGTCAAAAATGGGAGCTGCAGATGAGTTGACAGAACAGCAGGCCCGTCAACTCCATTTCGATCTTGAATCATCATACAATTCTTTCATGGCGGCACTGCCCTCTGCTGGAACTTAATTGCTTATTTCAGGTGATATGTTTGTACATATGTGGCTGAATTCTTGTTTTTTTCCTACAAAGTTTATACTACATATGATGCTTTATTTGGTCGAAGTGCTGATTGACGAGGATTCAGAAAAGAGTCTTGTAATTTATGGAACTTGTGTCTGGTGGTTCCATTTTATTCAATGAACTCAGCCCCAGACAAGATGCTTATTTGGTTTGCATATCTTTTCTTTTTGTTACATTAATCATATTACAAGGAAATATTGAGCTGTTAGATATGCTTTTGTAAATTTAAGTGGAAATTTTGATGTAAAACTTAGTTCCATGGTATTAAATCAACTCAAGAAATATCACATTTGTT</gDNA_template>
            <first_frame> F  L  Q  *  Q  R  L  A  S  L  R  V  S  H  P  L  L  Q  P  F  *  Q  R  S  K  Y  C  C  Q  L  P  W  R  L  N  Y  G  M  I  S  G  K  E  K  C  T  K  T  L  Q  S  S  L  L  *  *  R  Q  P  K  S  S  R  R  L  M  F  V  T  S  F  H  Q  L  N  M  K  L  N  A  R  S  *  L  L  I  S  K  L  Y  L  P  R  *  K  I  P  Y  L  A  L  S  D  F  M  T  P  T  K  W  I  A  L  L  P  *  T  G  L  *  P  L  G  C  L  P  L  W  S  T  V  P  P  L  L  H  H  L  H  P  Q  L  L  L  W  L  S  V  C  R  T  S  S  L  R  W  T  L  *  S  *  I  *  L  L  *  T  R  S  I  P  F  C  Q  T  Y  H  L  P  L  I  N  F  *  Y  F  H  L  I  L  R  G  R  Q  R  *  E  S  G  S  Q  G  C  Q  K  W  E  L  Q  M  S  *  Q  N  S  R  P  V  N  S  I  S  I  L  N  H  H  T  I  L  S  W  R  H  C  P  L  L  E  L  N  C  L  F  Q  V  I  C  L  Y  I  C  G  *  I  L  V  F  F  L  Q  S  L  Y  Y  I  *  C  F  I  W  S  K  C  *  L  T  R  I  Q  K  R  V  L  *  F  M  E  L  V  S  G  G  S  I  L  F  N  E  L  S  P  R  Q  D  A  Y  L  V  C  I  S  F  L  F  V  T  L  I  I  L  Q  G  N  I  E  L  L  D  M  L  L  *  I  *  V  E  I  L  M  *  N  L  V  P  W  Y  *  I  N  S  R  N  I  T  F  V </first_frame>
            <second_frame>  S  C  S  D  K  D  *  H  L  C  A  C  P  I  L  F  S  N  L  F  D  K  G  Q  N  I  V  A  N  S  H  G  G  *  T  M  E  *  *  A  G  K  R  N  V  R  K  L  C  R  A  L  C  Y  N  K  G  N  R  K  A  R  E  G  L  C  S  *  H  H  F  T  S  *  I  *  S  *  M  P  E  V  D  C  S  F  Q  N  F  I  F  H  V  E  R  Y  R  T  *  H  *  A  I  S  *  H  L  Q  N  G  L  P  C  C  L  K  P  A  C  D  L  W  G  A  C  H  C  G  A  P  C  R  R  C  Y  I  I  C  I  L  S  F  C  C  G  *  V  C  A  E  L  H  H  C  D  G  L  F  E  A  E  Y  D  C  C  R  P  G  P  S  P  F  V  R  P  I  I  F  P  *  *  T  F  N  T  S  I  *  F  *  G  E  D  K  D  E  R  V  A  L  K  A  V  K  N  G  S  C  R  *  V  D  R  T  A  G  P  S  T  P  F  R  S  *  I  I  I  Q  F  F  H  G  G  T  A  L  C  W  N  L  I  A  Y  F  R  *  Y  V  C  T  Y  V  A  E  F  L  F  F  S  Y  K  V  Y  T  T  Y  D  A  L  F  G  R  S  A  D  *  R  G  F  R  K  E  S  C  N  L  W  N  L  C  L  V  V  P  F  Y  S  M  N  S  A  P  D  K  M  L  I  W  F  A  Y  L  F  F  L  L  H  *  S  Y  Y  K  E  I  L  S  C  *  I  C  F  C  K  F  K  W  K  F  *  C  K  T  *  F  H  G  I  K  S  T  Q  E  I  S  H  L   </second_frame>
            <third_frame>   L  A  V  T  K  T  S  I  F  A  R  V  P  S  S  S  P  T  F  L  T  K  V  K  I  L  L  P  T  P  M  E  V  K  L  W  N  D  K  R  E  R  E  M  Y  E  N  F  A  E  L  F  A  I  I  K  A  T  E  K  L  E  K  A  Y  V  R  D  I  I  S  P  A  E  Y  E  A  E  C  Q  K  L  I  A  H  F  K  T  L  S  S  T  L  K  D  T  V  P  S  I  E  R  F  H  D  T  Y  K  M  D  C  P  A  A  L  N  R  L  V  T  S  G  V  P  A  T  V  E  H  R  A  A  A  A  T  S  S  A  S  S  A  S  V  V  A  E  C  V  Q  N  F  I  T  A  M  D  S  L  K  L  N  M  I  A  V  D  Q  V  H  P  L  L  S  D  L  S  S  S  L  N  K  L  L  I  L  P  S  D  F  E  G  K  T  K  M  R  E  W  L  S  R  L  S  K  M  G  A  A  D  E  L  T  E  Q  Q  A  R  Q  L  H  F  D  L  E  S  S  Y  N  S  F  M  A  A  L  P  S  A  G  T  *  L  L  I  S  G  D  M  F  V  H  M  W  L  N  S  C  F  F  P  T  K  F  I  L  H  M  M  L  Y  L  V  E  V  L  I  D  E  D  S  E  K  S  L  V  I  Y  G  T  C  V  W  W  F  H  F  I  Q  *  T  Q  P  Q  T  R  C  L  F  G  L  H  I  F  S  F  C  Y  I  N  H  I  T  R  K  Y  *  A  V  R  Y  A  F  V  N  L  S  G  N  F  D  V  K  L  S  S  M  V  L  N  Q  L  K  K  Y  H  I  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16562" stop="15843"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LAVTKTSIFARVPSSSPTFLTKVKILLPTPMEVKLWNDKREREMYENFAELFAIIKATEKLEKAYVRDIISPAEYEAECQKLIAHFKTLSSTLKDTVPSIERFHDTYKMDCPAALNRLVTSGVPATVEHRAAAATSSASSASVVAECVQNFITAMDSLKLNMIAVDQVHPLLSDLSSSLNKLLILPSDFEGKTKMREWLSRLSKMGAADELTEQQARQLHFDLESSYNSFMAALPSAGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="15483" PGL_stop="16089"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15483" e_stop="16089"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="15483" e_stop="16089" e_length="607"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15483" stop="16089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422274" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAACCAAAATAACAAATGTGATATTTCTTGAGTTGATTTAATACCATGGAACTAAGTTTTACATCAAAATTTCCACTTAAATTTACAAAAGCATATCTAACAGCTCAATATTTCCTTGTAATATGATTAATGTAACAAAAAGAAAAGATATGCAAACCAAATAAGCATCTTGTCTGGGGCTGAGTTCATTGAATAAAATGGAACCACCAGACACAAGTTCCATAAATTACAAGACTCTTTTCTGAATCCTCGTCAATCAGCACTTCGACCAAATAAAGCATCATATGTAGTATAAACTTTGTAGGAAAAAAACAAGAATTCAGCCACATATGTACAAACATATCACCTGAAATAAGCAATTAAGTTCCAGCAGAGGGCAGTGCCGCCATGAAAGAATTGTATGATGATTCAAGATCGAAATGGAGTTGACGGGCCTGCTGTTCTGTCAACTCATCTGCAGCTCCCATTTTTGACAGCCTTGAGAGCCACTCTCTCATCTTTGTCTTCCCCTCAAAATCAGATGGAAGTATTAAAAGTTTATTAAGGGAAGATGATAGGTCTGACAAAAGGGGATGGACCTGGTCTACAGCAATCATATTCAGCTTC</gDNA_template>
            <first_frame> I  T  K  I  T  N  V  I  F  L  E  L  I  *  Y  H  G  T  K  F  Y  I  K  I  S  T  *  I  Y  K  S  I  S  N  S  S  I  F  P  C  N  M  I  N  V  T  K  R  K  D  M  Q  T  K  *  A  S  C  L  G  L  S  S  L  N  K  M  E  P  P  D  T  S  S  I  N  Y  K  T  L  F  *  I  L  V  N  Q  H  F  D  Q  I  K  H  H  M  *  Y  K  L  C  R  K  K  T  R  I  Q  P  H  M  Y  K  H  I  T  *  N  K  Q  L  S  S  S  R  G  Q  C  R  H  E  R  I  V  *  *  F  K  I  E  M  E  L  T  G  L  L  F  C  Q  L  I  C  S  S  H  F  *  Q  P  *  E  P  L  S  H  L  C  L  P  L  K  I  R  W  K  Y  *  K  F  I  K  G  R  *  *  V  *  Q  K  G  M  D  L  V  Y  S  N  H  I  Q  L  </first_frame>
            <second_frame>  *  P  K  *  Q  M  *  Y  F  L  S  *  F  N  T  M  E  L  S  F  T  S  K  F  P  L  K  F  T  K  A  Y  L  T  A  Q  Y  F  L  V  I  *  L  M  *  Q  K  E  K  I  C  K  P  N  K  H  L  V  W  G  *  V  H  *  I  K  W  N  H  Q  T  Q  V  P  *  I  T  R  L  F  S  E  S  S  S  I  S  T  S  T  K  *  S  I  I  C  S  I  N  F  V  G  K  K  Q  E  F  S  H  I  C  T  N  I  S  P  E  I  S  N  *  V  P  A  E  G  S  A  A  M  K  E  L  Y  D  D  S  R  S  K  W  S  *  R  A  C  C  S  V  N  S  S  A  A  P  I  F  D  S  L  E  S  H  S  L  I  F  V  F  P  S  K  S  D  G  S  I  K  S  L  L  R  E  D  D  R  S  D  K  R  G  W  T  W  S  T  A  I  I  F  S  F </second_frame>
            <third_frame>   N  Q  N  N  K  C  D  I  S  *  V  D  L  I  P  W  N  *  V  L  H  Q  N  F  H  L  N  L  Q  K  H  I  *  Q  L  N  I  S  L  *  Y  D  *  C  N  K  K  K  R  Y  A  N  Q  I  S  I  L  S  G  A  E  F  I  E  *  N  G  T  T  R  H  K  F  H  K  L  Q  D  S  F  L  N  P  R  Q  S  A  L  R  P  N  K  A  S  Y  V  V  *  T  L  *  E  K  N  K  N  S  A  T  Y  V  Q  T  Y  H  L  K  *  A  I  K  F  Q  Q  R  A  V  P  P  *  K  N  C  M  M  I  Q  D  R  N  G  V  D  G  P  A  V  L  S  T  H  L  Q  L  P  F  L  T  A  L  R  A  T  L  S  S  L  S  S  P  Q  N  Q  M  E  V  L  K  V  Y  *  G  K  M  I  G  L  T  K  G  D  G  P  G  L  Q  Q  S  Y  S  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204D01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="25680" PGL_stop="27881"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27078" e_stop="27565"/>
            <exon e_start="27641" e_stop="27881"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="27078" e_stop="27565" e_length="488"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.994">
            <gDNA_intron_boundary i_start="27566" i_stop="27640" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="27641" e_stop="27881" e_length="241"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27078" stop="27565"/>
              <exon start="27641" stop="27881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27078" stop="27565"/>
              <exon start="27641" stop="27674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209169" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCTGATGTTTGGTAGTAAAATGAAACAGGAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCAGTAAGTTATAACTGTCACTAGTCGATCTCTTCCCTTCATTTTAAGCAAATACTACTAATTGTCATTTACATTGAACCATCTTTCTCTTCGTCGGTTGTAAATTTGACTCAGAGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAGGTCAATTCGGCTTCACTTGCTAATAGTTTTAAGATATTTATAAATACAAAATGAAGCAAAAAAGTTAATAGGGGGCTCAGACGACTTCTTTATGTTCTGTGAATTCAGGGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACAAATACA : GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGACTAGGAACTTACCCTCCAAGTCGATGCTCCGGTATAGTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTGTCAGCACTTACCGT</gDNA_template>
            <first_frame> I  L  M  F  G  S  K  M  K  Q  E  D  I  K  L  M  E  D  M  G  V  N  G  Y  R  F  S  I  S  W  A  R  I  L  P  S  K  L  *  L  S  L  V  D  L  F  P  S  F  *  A  N  T  T  N  C  H  L  H  *  T  I  F  L  F  V  G  C  K  F  D  S  E  G  T  F  G  D  V  N  M  A  G  I  E  H  Y  N  K  L  I  D  A  L  L  Q  K  G  Q  F  G  F  T  C  *  *  F  *  D  I  Y  K  Y  K  M  K  Q  K  S  *  *  G  A  Q  T  T  S  L  C  S  V  N  S  G  I  Q  P  L  I  T  L  T  H  Y  D  I  P  Q  E  L  E  E  R  Y  G  G  W  L  S  S  Q  I  Q :   D  D  F  S  Y  Y  A  D  I  C  F  K  Y  F  G  D  R  V  K  Y  W  T  T  I  N  E  P  N  L  M  A  V  R  G  Y  R  L  G  T  Y  P  P  S  R  C  S  G  I  V  G  N  C  S  A  G  D  S  E  R  E  P  F  I  A  A  H  N  M  I  L  S  H  A  A  A  V  S  T  Y  R </first_frame>
            <second_frame>  F  *  C  L  V  V  K  *  N  R  R  T  L  S  S  W  K  I  W  V  L  M  A  I  V  S  L  S  R  G  P  E  F  C  P  V  S  Y  N  C  H  *  S  I  S  S  L  H  F  K  Q  I  L  L  I  V  I  Y  I  E  P  S  F  S  S  S  V  V  N  L  T  Q  R  G  H  L  E  M  L  I  W  P  E  L  S  T  T  I  S  L  L  M  H  S  Y  R  K  V  N  S  A  S  L  A  N  S  F  K  I  F  I  N  T  K  *  S  K  K  V  N  R  G  L  R  R  L  L  Y  V  L  *  I  Q  G  S  N  R  *  S  H  *  H  I  M  T  Y  H  K  N  L  R  K  D  M  V  V  G  L  V  H  K  Y   : R  M  I  S  A  I  M  Q  T  Y  A  S  N  I  L  G  T  E  S  N  T  G  Q  P  S  M  S  L  T  L  W  L  F  V  A  I  D  *  E  L  T  L  Q  V  D  A  P  V  *  L  G  I  V  V  L  V  I  Q  K  G  S  P  S  L  Q  L  T  I  *  S  Y  L  M  Q  L  L  S  A  L  T   </second_frame>
            <third_frame>   S  D  V  W  *  *  N  E  T  G  G  H  *  A  H  G  R  Y  G  C  *  W  L  S  F  L  Y  L  V  G  Q  N  S  A  Q  *  V  I  T  V  T  S  R  S  L  P  F  I  L  S  K  Y  Y  *  L  S  F  T  L  N  H  L  S  L  R  R  L  *  I  *  L  R  G  D  I  W  R  C  *  Y  G  R  N  *  A  L  Q  *  A  Y  *  C  T  L  T  E  R  S  I  R  L  H  L  L  I  V  L  R  Y  L  *  I  Q  N  E  A  K  K  L  I  G  G  S  D  D  F  F  M  F  C  E  F  R  D  P  T  V  D  H  I  N  T  L  *  H  T  T  R  T  *  G  K  I  W  W  L  A  *  F  T  N  T  :  G  *  F  Q  L  L  C  R  H  M  L  Q  I  F  W  G  Q  S  Q  I  L  D  N  H  Q  *  A  *  P  Y  G  C  S  W  L  *  T  R  N  L  P  S  K  S  M  L  R  Y  S  W  E  L  *  C  W  *  F  R  K  G  A  L  H  C  S  S  Q  Y  D  P  I  S  C  S  C  C  Q  H  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27441" stop="27565"/>
                    <exon start="27641" stop="27881"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GAQTTSLCSVNSGIQPLITLTHYDIPQELEERYGGWLSSQIQDDFSYYADICFKYFGDRVKYWTTINEPNLMAVRGYRLGTYPPSRCSGIVGNCSAGDSEREPFIAAHNMILSHAAAVSTYR</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27205" stop="27423"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SISSLHFKQILLIVIYIEPSFSSSVVNLTQRGHLEMLIWPELSTTISLLMHSYRKVNSASLANSFKIFINTK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="25680" e_stop="25877"/>
            <exon e_start="25954" e_stop="26020"/>
            <exon e_start="26102" e_stop="26160"/>
            <exon e_start="27108" e_stop="27183"/>
            <exon e_start="27295" e_stop="27369"/>
            <exon e_start="27478" e_stop="27518"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.766" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.982" e_score="0.987"/>
          <exon-intron don_prob="0.987" acc_prob="0.861" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="25680" e_stop="25877" e_length="198"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.991">
            <gDNA_intron_boundary i_start="25878" i_stop="25953" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25954" e_stop="26020" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26021" i_stop="26101" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26102" e_stop="26160" e_length="59"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.766">
            <gDNA_intron_boundary i_start="26161" i_stop="27107" i_length="947"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="27108" e_stop="27183" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.982">
            <gDNA_intron_boundary i_start="27184" i_stop="27294" i_length="111"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27295" e_stop="27369" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.861">
            <gDNA_intron_boundary i_start="27370" i_stop="27477" i_length="108"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27478" e_stop="27518" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25680" stop="25877"/>
              <exon start="25954" stop="26020"/>
              <exon start="26102" stop="26160"/>
              <exon start="27108" stop="27183"/>
              <exon start="27295" stop="27369"/>
              <exon start="27478" stop="27518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245897" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGAAAGAGAAATACTAGCTACCACTTCTCTCTATGCTTCCTGCAATGTTTTGTCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCACATTATCATCATGTCATCAAACAGAGATCCTTAATATTATCAAAGAAAATTCTAACCAAGTTTCATCTTCAAGCAATTTCTTATTTGGAACATCCTCTTCTTGTTACCAG : TATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGATGTTTTTACTCACCAAGCTG : GTCATATTAAAGATGGAAGCAATGGAGATGTTGCTGTTGATCACTACAATCGTTATTTG : GAGGACATTAAGCTCATGGAAGATATGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCCAGAATTCTGCCCA : AGGGGACATTTGGAGATGTTAATATGGCCGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAG : GGATCCAACCGTTGATCACATTAACACATTATGACATACCA</gDNA_template>
            <first_frame> L  K  E  K  Y  *  L  P  L  L  S  M  L  P  A  M  F  C  Q  I  A  I  C  M  L  F  C  G  F  T  L  S  S  C  H  Q  T  E  I  L  N  I  I  K  E  N  S  N  Q  V  S  S  S  S  N  F  L  F  G  T  S  S  S  C  Y  Q  :  Y  E  G  A  I  L  S  D  G  K  G  L  N  N  W  D  V  F  T  H  Q  A   : G  H  I  K  D  G  S  N  G  D  V  A  V  D  H  Y  N  R  Y  L  :  E  D  I  K  L  M  E  D  M  G  V  N  G  Y  R  F  S  I  S  W  A  R  I  L  P   : K  G  T  F  G  D  V  N  M  A  G  I  E  H  Y  N  K  L  I  D  A  L  L  Q  K   : G  I  Q  P  L  I  T  L  T  H  Y  D  I  P </first_frame>
            <second_frame>  *  K  R  N  T  S  Y  H  F  S  L  C  F  L  Q  C  F  V  K  *  Q  F  A  C  C  F  V  V  S  H  Y  H  H  V  I  K  Q  R  S  L  I  L  S  K  K  I  L  T  K  F  H  L  Q  A  I  S  Y  L  E  H  P  L  L  V  T  S :   M  K  E  L  F  S  V  M  E  K  V  S  T  I  G  M  F  L  L  T  K  L  :  V  I  L  K  M  E  A  M  E  M  L  L  L  I  T  T  I  V  I  W :   R  T  L  S  S  W  K  I  W  V  L  M  A  I  V  S  L  S  R  G  P  E  F  C  P  :  R  G  H  L  E  M  L  I  W  P  E  L  S  T  T  I  S  L  L  M  H  S  Y  R  K  :  G  S  N  R  *  S  H  *  H  I  M  T  Y   </second_frame>
            <third_frame>   E  R  E  I  L  A  T  T  S  L  Y  A  S  C  N  V  L  S  N  S  N  L  H  V  V  L  W  F  H  I  I  I  M  S  S  N  R  D  P  *  Y  Y  Q  R  K  F  *  P  S  F  I  F  K  Q  F  L  I  W  N  I  L  F  L  L  P   : V  *  R  S  Y  S  Q  *  W  K  R  S  Q  Q  L  G  C  F  Y  S  P  S  W :   S  Y  *  R  W  K  Q  W  R  C  C  C  *  S  L  Q  S  L  F   : G  G  H  *  A  H  G  R  Y  G  C  *  W  L  S  F  L  Y  L  V  G  Q  N  S  A  Q :   G  D  I  W  R  C  *  Y  G  R  N  *  A  L  Q  *  A  Y  *  C  T  L  T  E  R :   D  P  T  V  D  H  I  N  T  L  *  H  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25698" stop="25877"/>
                    <exon start="25954" stop="26020"/>
                    <exon start="26102" stop="26160"/>
                    <exon start="27108" stop="27183"/>
                    <exon start="27295" stop="27369"/>
                    <exon start="27478" stop="27518"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>498</number_coding_nucleotides>
                  <number_encoded_amino_acids>166</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPLLSMLPAMFCQIAICMLFCGFTLSSCHQTEILNIIKENSNQVSSSSNFLFGTSSSCYQYEGAILSDGKGLNNWDVFTHQAGHIKDGSNGDVAVDHYNRYLEDIKLMEDMGVNGYRFSISWARILPKGTFGDVNMAGIEHYNKLIDALLQKGIQPLITLTHYDIP</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25741" stop="25877"/>
                    <exon start="25954" stop="26020"/>
                    <exon start="26102" stop="26160"/>
                    <exon start="27108" stop="27183"/>
                    <exon start="27295" stop="27369"/>
                    <exon start="27478" stop="27492"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QFACCFVVSHYHHVIKQRSLILSKKILTKFHLQAISYLEHPLLVTSMKELFSVMEKVSTIGMFLLTKLVILKMEAMEMLLLITTIVIWRTLSSWKIWVLMAIVSLSRGPEFCPRGHLEMLIWPELSTTISLLMHSYRKGSNR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="28392" PGL_stop="29388"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28392" e_stop="28633"/>
            <exon e_start="28760" e_stop="28862"/>
            <exon e_start="28996" e_stop="29388"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.936" e_score="0.996"/>
          <exon-intron don_prob="0.989" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="28392" e_stop="28633" e_length="242"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.936">
            <gDNA_intron_boundary i_start="28634" i_stop="28759" i_length="126"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28760" e_stop="28862" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.966">
            <gDNA_intron_boundary i_start="28863" i_stop="28995" i_length="133"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="28996" e_stop="29388" e_length="393"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28392" stop="28633"/>
              <exon start="28760" stop="28862"/>
              <exon start="28996" stop="29388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349714" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCCTATTATATTAGGAAGATATCCCAAAGAAATGGTAGAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGTTGAGTTATGGCCTAGATTTCATTGGCATCAATTACTATACGGCTAAATATATCAAAGATTGCTTATATTCTGCCTGTGAACATGGAAACACTTGGTCAGAGGGTTCCTTTTTTGAGACGAGAGAAAAAGACGGTGTCTACATTGGTCAACCT : ACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCTATGGTTATCACCGAAAATG : GCATTGCTGAGAATGATAATCTGAATCCTTCAATAACAGACACCTTGAACGATATTCATAGAGTGAACTATATGCATAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGAGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCATGTATAAACAGCTCATGTATAACTTCAACATACAACTCGAAAAAAATACTGCCCAGAACTAGTAGGAGAAGATGATGGAAAGTAAATATTATTTTCACTCCAGTGGGACTGTAATCATTTAAACAAGATTTGTTAATTACACAG</gDNA_template>
            <first_frame> T  L  L  Y  *  E  D  I  P  K  K  W  *  K  F  W  D  L  I  C  Q  T  F  Q  R  M  I  *  A  S  *  V  M  A  *  I  S  L  A  S  I  T  I  R  L  N  I  S  K  I  A  Y  I  L  P  V  N  M  E  T  L  G  Q  R  V  P  F  L  R  R  E  K  K  T  V  S  T  L  V  N  L :   L  K  W  T  G  S  F  C  T  H  K  G  *  K  K  L  *  C  T  *  R  T  D  S  T  I  L  L  W  L  S  P  K  M  :  A  L  L  R  M  I  I  *  I  L  Q  *  Q  T  P  *  T  I  F  I  E  *  T  I  C  I  A  T  *  I  H  W  Q  M  Q  S  R  M  V  Q  M  *  E  G  T  L  F  G  P  F  S  T  T  L  S  G  *  M  D  I  S  *  D  L  D  F  T  M  S  T  I  L  I  F  R  E  P  Q  N  Y  Q  L  P  C  I  N  S  S  C  I  T  S  T  Y  N  S  K  K  I  L  P  R  T  S  R  R  R  *  W  K  V  N  I  I  F  T  P  V  G  L  *  S  F  K  Q  D  L  L  I  T  Q </first_frame>
            <second_frame>  P  Y  Y  I  R  K  I  S  Q  R  N  G  R  N  S  G  I  *  S  A  R  L  F  K  E  *  F  E  Q  V  E  L  W  P  R  F  H  W  H  Q  L  L  Y  G  *  I  Y  Q  R  L  L  I  F  C  L  *  T  W  K  H  L  V  R  G  F  L  F  *  D  E  R  K  R  R  C  L  H  W  S  T   : Y  *  S  G  L  A  L  S  V  P  T  R  D  E  K  N  C  D  V  H  E  G  Q  I  Q  Q  Y  S  Y  G  Y  H  R  K  W :   H  C  *  E  *  *  S  E  S  F  N  N  R  H  L  E  R  Y  S  *  S  E  L  Y  A  *  L  L  K  F  I  G  K  C  N  H  G  W  C  R  C  E  R  V  L  C  L  V  P  S  R  Q  L  *  V  A  R  W  I  *  V  K  I  W  T  S  L  C  Q  L  Y  *  S  S  E  N  P  K  I  I  S  Y  H  V  *  T  A  H  V  *  L  Q  H  T  T  R  K  K  Y  C  P  E  L  V  G  E  D  D  G  K  *  I  L  F  S  L  Q  W  D  C  N  H  L  N  K  I  C  *  L  H   </second_frame>
            <third_frame>   P  I  I  L  G  R  Y  P  K  E  M  V  E  I  L  G  S  N  L  P  D  F  S  K  N  D  L  S  K  L  S  Y  G  L  D  F  I  G  I  N  Y  Y  T  A  K  Y  I  K  D  C  L  Y  S  A  C  E  H  G  N  T  W  S  E  G  S  F  F  E  T  R  E  K  D  G  V  Y  I  G  Q  P  :  T  E  V  D  W  L  F  L  Y  P  Q  G  M  K  K  I  V  M  Y  M  K  D  R  F  N  N  T  P  M  V  I  T  E  N   : G  I  A  E  N  D  N  L  N  P  S  I  T  D  T  L  N  D  I  H  R  V  N  Y  M  H  S  Y  L  N  S  L  A  N  A  I  T  D  G  A  D  V  R  G  Y  F  V  W  S  L  L  D  N  F  E  W  L  D  G  Y  K  L  R  F  G  L  H  Y  V  N  Y  T  N  L  Q  R  T  P  K  L  S  A  T  M  Y  K  Q  L  M  Y  N  F  N  I  Q  L  E  K  N  T  A  Q  N  *  *  E  K  M  M  E  S  K  Y  Y  F  H  S  S  G  T  V  I  I  *  T  R  F  V  N  Y  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28394" stop="28633"/>
                    <exon start="28760" stop="28862"/>
                    <exon start="28996" stop="29306"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>651</number_coding_nucleotides>
                  <number_encoded_amino_acids>217</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PIILGRYPKEMVEILGSNLPDFSKNDLSKLSYGLDFIGINYYTAKYIKDCLYSACEHGNTWSEGSFFETREKDGVYIGQPTEVDWLFLYPQGMKKIVMYMKDRFNNTPMVITENGIAENDNLNPSITDTLNDIHRVNYMHSYLNSLANAITDGADVRGYFVWSLLDNFEWLDGYKLRFGLHYVNYTNLQRTPKLSATMYKQLMYNFNIQLEKNTAQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="29341" PGL_stop="28655"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29341" e_stop="28655"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="29341" e_stop="28655" e_length="687"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29341" stop="28655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379053" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAAAATAATATTTACTTTCCATCATCTTCTCCTACTAGTTCTGGGCAGTATTTTTTTCGAGTTGTATGTTGAAGTTATACATGAGCTGTTTATACATGGTAGCTGATAATTTTGGGGTTCTCTGAAGATTAGTATAGTTGACATAGTGAAGTCCAAATCTTAACTTATATCCATCTAGCCACTCAAAGTTGTCGAGAAGGGACCAAACAAAGTACCCTCTCACATCTGCACCATCCGTGATTGCATTTGCCAATGAATTTAAGTAGCTATGCATATAGTTCACTCTATGAATATCGTTCAAGGTGTCTGTTATTGAAGGATTCAGATTATCATTCTCAGCAATGCCTGCAATGTTACAAGTTGTGTCAGTGGATGCATCCCAACAGATCCAAATGCATCTTGTTCAGGTTATTAGTTGATTAAGTAAACTATATCTCGCTTTTAAATGACAAGAATGTGAAATTTCTTTTCTTCTTACCATTTTCGGTGATAACCATAGGAGTATTGTTGAATCTGTCCTTCATGTACATCACAATTTTTTTCATCCCTTGTGGGTACAGAAAGAGCCAGTCCACTTCAGTCTGATTCATTTTGAAGTTGTTGAAAATAAATAAAATTCAGCAATGCACAAGTGCCAGTAATAGTTTGGCATAGTGGAGGGTTAAAAGATGAAGAATGCTTAAATG</gDNA_template>
            <first_frame> *  K  *  Y  L  L  S  I  I  F  S  Y  *  F  W  A  V  F  F  S  S  C  M  L  K  L  Y  M  S  C  L  Y  M  V  A  D  N  F  G  V  L  *  R  L  V  *  L  T  *  *  S  P  N  L  N  L  Y  P  S  S  H  S  K  L  S  R  R  D  Q  T  K  Y  P  L  T  S  A  P  S  V  I  A  F  A  N  E  F  K  *  L  C  I  *  F  T  L  *  I  S  F  K  V  S  V  I  E  G  F  R  L  S  F  S  A  M  P  A  M  L  Q  V  V  S  V  D  A  S  Q  Q  I  Q  M  H  L  V  Q  V  I  S  *  L  S  K  L  Y  L  A  F  K  *  Q  E  C  E  I  S  F  L  L  T  I  F  G  D  N  H  R  S  I  V  E  S  V  L  H  V  H  H  N  F  F  H  P  L  W  V  Q  K  E  P  V  H  F  S  L  I  H  F  E  V  V  E  N  K  *  N  S  A  M  H  K  C  Q  *  *  F  G  I  V  E  G  *  K  M  K  N  A  *  M </first_frame>
            <second_frame>  E  N  N  I  Y  F  P  S  S  S  P  T  S  S  G  Q  Y  F  F  R  V  V  C  *  S  Y  T  *  A  V  Y  T  W  *  L  I  I  L  G  F  S  E  D  *  Y  S  *  H  S  E  V  Q  I  L  T  Y  I  H  L  A  T  Q  S  C  R  E  G  T  K  Q  S  T  L  S  H  L  H  H  P  *  L  H  L  P  M  N  L  S  S  Y  A  Y  S  S  L  Y  E  Y  R  S  R  C  L  L  L  K  D  S  D  Y  H  S  Q  Q  C  L  Q  C  Y  K  L  C  Q  W  M  H  P  N  R  S  K  C  I  L  F  R  L  L  V  D  *  V  N  Y  I  S  L  L  N  D  K  N  V  K  F  L  F  F  L  P  F  S  V  I  T  I  G  V  L  L  N  L  S  F  M  Y  I  T  I  F  F  I  P  C  G  Y  R  K  S  Q  S  T  S  V  *  F  I  L  K  L  L  K  I  N  K  I  Q  Q  C  T  S  A  S  N  S  L  A  *  W  R  V  K  R  *  R  M  L  K   </second_frame>
            <third_frame>   K  I  I  F  T  F  H  H  L  L  L  L  V  L  G  S  I  F  F  E  L  Y  V  E  V  I  H  E  L  F  I  H  G  S  *  *  F  W  G  S  L  K  I  S  I  V  D  I  V  K  S  K  S  *  L  I  S  I  *  P  L  K  V  V  E  K  G  P  N  K  V  P  S  H  I  C  T  I  R  D  C  I  C  Q  *  I  *  V  A  M  H  I  V  H  S  M  N  I  V  Q  G  V  C  Y  *  R  I  Q  I  I  I  L  S  N  A  C  N  V  T  S  C  V  S  G  C  I  P  T  D  P  N  A  S  C  S  G  Y  *  L  I  K  *  T  I  S  R  F  *  M  T  R  M  *  N  F  F  S  S  Y  H  F  R  *  *  P  *  E  Y  C  *  I  C  P  S  C  T  S  Q  F  F  S  S  L  V  G  T  E  R  A  S  P  L  Q  S  D  S  F  *  S  C  *  K  *  I  K  F  S  N  A  Q  V  P  V  I  V  W  H  S  G  G  L  K  D  E  E  C  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204D01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="30089" PGL_stop="33707"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30089" e_stop="30286"/>
            <exon e_start="30364" e_stop="30430"/>
            <exon e_start="30504" e_stop="30562"/>
            <exon e_start="31314" e_stop="31389"/>
            <exon e_start="31497" e_stop="31571"/>
            <exon e_start="31677" e_stop="31764"/>
            <exon e_start="31840" e_stop="32092"/>
            <exon e_start="32397" e_stop="32512"/>
            <exon e_start="32618" e_stop="32867"/>
            <exon e_start="32994" e_stop="33096"/>
            <exon e_start="33230" e_stop="33707"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.739" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.805" acc_prob="0.855" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.846" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.830" e_score="1.000"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30089" e_stop="30286" e_length="198"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="30287" i_stop="30363" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30364" e_stop="30430" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30431" i_stop="30503" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="30504" e_stop="30562" e_length="59"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.956">
            <gDNA_intron_boundary i_start="30563" i_stop="31313" i_length="751"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31314" e_stop="31389" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.979">
            <gDNA_intron_boundary i_start="31390" i_stop="31496" i_length="107"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31497" e_stop="31571" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.739" acc_prob="0.989">
            <gDNA_intron_boundary i_start="31572" i_stop="31676" i_length="105"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="31677" e_stop="31764" e_length="88"/>
          </exon>
          <intron i_serial="6" don_prob="0.969" acc_prob="0.995">
            <gDNA_intron_boundary i_start="31765" i_stop="31839" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="31840" e_stop="32092" e_length="253"/>
          </exon>
          <intron i_serial="7" don_prob="0.805" acc_prob="0.855">
            <gDNA_intron_boundary i_start="32093" i_stop="32396" i_length="304"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="32397" e_stop="32512" e_length="116"/>
          </exon>
          <intron i_serial="8" don_prob="0.983" acc_prob="0.846">
            <gDNA_intron_boundary i_start="32513" i_stop="32617" i_length="105"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="32618" e_stop="32867" e_length="250"/>
          </exon>
          <intron i_serial="9" don_prob="0.962" acc_prob="0.941">
            <gDNA_intron_boundary i_start="32868" i_stop="32993" i_length="126"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="32994" e_stop="33096" e_length="103"/>
          </exon>
          <intron i_serial="10" don_prob="0.991" acc_prob="0.830">
            <gDNA_intron_boundary i_start="33097" i_stop="33229" i_length="133"/>
          </intron>
          <exon e_serial="11" e_score="0.939">
            <gDNA_exon_boundary e_start="33230" e_stop="33707" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30089" stop="30286"/>
              <exon start="30364" stop="30430"/>
              <exon start="30504" stop="30562"/>
              <exon start="31314" stop="31389"/>
              <exon start="31497" stop="31571"/>
              <exon start="31677" stop="31764"/>
              <exon start="31840" stop="32050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31843" stop="32092"/>
              <exon start="32397" stop="32512"/>
              <exon start="32618" stop="32867"/>
              <exon start="32994" stop="33095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376534" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31843" stop="32092"/>
              <exon start="32397" stop="32512"/>
              <exon start="32618" stop="32720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32689" stop="32867"/>
              <exon start="32994" stop="33096"/>
              <exon start="33230" stop="33579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32807" stop="32867"/>
              <exon start="32994" stop="33096"/>
              <exon start="33230" stop="33593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33001" stop="33096"/>
              <exon start="33230" stop="33707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376533" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGAAAGAGAAATACTAGCTACCACTTCTCTCTATTTTTCCTGCAATGTTTTGTCGAATAGCAATTTGCATGTTGTTTTGTAGTTTCATAATATCATCATGTCATCAAACAGATATCCTTAATATTATCAAAAAAAATCCTAACCAAGTTTCAACTTCAAGCAATTTCTTATTTGGAACATCCTCTTCCTGTTACCAG : TATGAAGGAGCTATTCTCAGTGATGGAAAAGGTCTCAACAATTGGGATGTTTTTACTCACGAAGCTG : GTCATATTAAGGATGGAAGCAACGGAGATGTTGCTGTTGATCACTACAATCGTTATTTG : GAGGACGTTAAGCTCATGGAAGATTTGGGTGTTAATGGCTATCGTTTCTCTATCTCGTGGGCAAGAATTCTGCCCA : AAGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTACAATAAGCTTATTGATGCACTCTTACAGAAAG : GGATCCAACCGTTGATCACATTAACACATTATGACATACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACA : GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGCTATAGAGAGGGAACTTACCCTCCATCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGATTCAGAAAGGGAGCCCTTCATTGCAGCTCACAATATGATCCTATCTCATGCAGCTGCTATCAGTATTTACCGTACCAGATATCAG : AAAAGACAAGGAGGAATGATCGGAATTTCTTTGGATACCCAATGGTTTGAACCATTTAGCAATTCCTCAGAAGACATAGCCGCAGCTGAGAGAGCTCGGTCATTCTACGTCAACTG : GTTTTTAGACCCTATTATATTAGGAAGATATCCCAAAGAAATGGTACAAATTCTGGGATCTAATCTGCCAGACTTTTCAAAGAATGATTTGAGCAAGCTGAGTTATGGCTTGGATTTCATTGGCATCAATTACTATACGGCTGCATATATCAAAGATTGCTTATATTCTGCATGTGAACATGGAAGAACTTGGTCAGAGGGTTCCTTTTTAGATACTAGAGAAAAAGACGGTGTCTACATTGGTCAACCT : ACTGAAGTGGACTGGCTCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAAGGACAGATTCAACAATACTCCAATGGTCATCACCGAAAATG : GCATTGCTGAGAATGATAATCTGAATCCTTCAATAATAGACACCTTGAACGATTTTCATAGAGTGGACTATATGCGTAGCTACTTAAATTCATTGGCAAATGCAATCACGGATGGTGCAGATGTGAGGGGGTACTTTGTTTGGTCCCTTCTCGACAACTTTGAGTGGCTAGATGGATATAAGTTAAGATTTGGACTTCACTATGTCAACTATACTAATCTTCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAGCTCATGTATAACTTCAACATACAACTTGAAAAAAATACTGCCCAGAACTAGTGGCCGGGAGAAGACGATGAAAAGCGGAGGCTTCTTAAGATTATTTTCATTCTGTGTCTGTTGTTGGAAGACAGTTTATTGTGTAATGAAACAAATTAGTGGTCAGAAATACTCTATTGAAAATTGATTATAATTATCCAGATTTATTGATGAAAAAGAAGAAAATA</gDNA_template>
            <first_frame> S  K  E  K  Y  *  L  P  L  L  S  I  F  P  A  M  F  C  R  I  A  I  C  M  L  F  C  S  F  I  I  S  S  C  H  Q  T  D  I  L  N  I  I  K  K  N  P  N  Q  V  S  T  S  S  N  F  L  F  G  T  S  S  S  C  Y  Q  :  Y  E  G  A  I  L  S  D  G  K  G  L  N  N  W  D  V  F  T  H  E  A   : G  H  I  K  D  G  S  N  G  D  V  A  V  D  H  Y  N  R  Y  L  :  E  D  V  K  L  M  E  D  L  G  V  N  G  Y  R  F  S  I  S  W  A  R  I  L  P   : K  G  T  F  G  D  V  N  M  A  G  I  E  H  Y  N  K  L  I  D  A  L  L  Q  K   : G  I  Q  P  L  I  T  L  T  H  Y  D  I  P  Q  E  L  E  E  R  Y  G  G  W  L  S  S  R  I  Q :   D  D  F  S  Y  Y  A  D  I  C  F  K  Y  F  G  D  R  V  K  Y  W  T  T  I  N  E  P  N  L  M  A  V  R  G  Y  R  E  G  T  Y  P  P  S  R  C  S  G  I  F  G  N  C  S  A  G  D  S  E  R  E  P  F  I  A  A  H  N  M  I  L  S  H  A  A  A  I  S  I  Y  R  T  R  Y  Q  :  K  R  Q  G  G  M  I  G  I  S  L  D  T  Q  W  F  E  P  F  S  N  S  S  E  D  I  A  A  A  E  R  A  R  S  F  Y  V  N  W :   F  L  D  P  I  I  L  G  R  Y  P  K  E  M  V  Q  I  L  G  S  N  L  P  D  F  S  K  N  D  L  S  K  L  S  Y  G  L  D  F  I  G  I  N  Y  Y  T  A  A  Y  I  K  D  C  L  Y  S  A  C  E  H  G  R  T  W  S  E  G  S  F  L  D  T  R  E  K  D  G  V  Y  I  G  Q  P  :  T  E  V  D  W  L  F  L  Y  P  Q  G  M  K  K  I  V  M  Y  M  K  D  R  F  N  N  T  P  M  V  I  T  E  N   : G  I  A  E  N  D  N  L  N  P  S  I  I  D  T  L  N  D  F  H  R  V  D  Y  M  R  S  Y  L  N  S  L  A  N  A  I  T  D  G  A  D  V  R  G  Y  F  V  W  S  L  L  D  N  F  E  W  L  D  G  Y  K  L  R  F  G  L  H  Y  V  N  Y  T  N  L  Q  R  T  P  K  L  S  A  T  R  Y  K  Q  L  M  Y  N  F  N  I  Q  L  E  K  N  T  A  Q  N  *  W  P  G  E  D  D  E  K  R  R  L  L  K  I  I  F  I  L  C  L  L  L  E  D  S  L  L  C  N  E  T  N  *  W  S  E  I  L  Y  *  K  L  I  I  I  I  Q  I  Y  *  *  K  R  R  K   </first_frame>
            <second_frame>  R  K  R  N  T  S  Y  H  F  S  L  F  F  L  Q  C  F  V  E  *  Q  F  A  C  C  F  V  V  S  *  Y  H  H  V  I  K  Q  I  S  L  I  L  S  K  K  I  L  T  K  F  Q  L  Q  A  I  S  Y  L  E  H  P  L  P  V  T  S :   M  K  E  L  F  S  V  M  E  K  V  S  T  I  G  M  F  L  L  T  K  L  :  V  I  L  R  M  E  A  T  E  M  L  L  L  I  T  T  I  V  I  W :   R  T  L  S  S  W  K  I  W  V  L  M  A  I  V  S  L  S  R  G  Q  E  F  C  P  :  K  G  H  L  E  M  L  I  W  L  E  L  S  T  T  I  S  L  L  M  H  S  Y  R  K  :  G  S  N  R  *  S  H  *  H  I  M  T  Y  H  K  N  L  R  K  D  M  V  V  G  L  V  H  E  Y   : R  M  I  S  A  I  M  Q  T  Y  A  S  N  I  L  G  T  E  S  N  T  G  Q  P  S  M  S  L  T  L  W  L  F  V  A  I  E  R  E  L  T  L  H  L  D  A  P  V  Y  L  G  I  V  V  L  V  I  Q  K  G  S  P  S  L  Q  L  T  I  *  S  Y  L  M  Q  L  L  S  V  F  T  V  P  D  I  R :   K  D  K  E  E  *  S  E  F  L  W  I  P  N  G  L  N  H  L  A  I  P  Q  K  T  *  P  Q  L  R  E  L  G  H  S  T  S  T   : G  F  *  T  L  L  Y  *  E  D  I  P  K  K  W  Y  K  F  W  D  L  I  C  Q  T  F  Q  R  M  I  *  A  S  *  V  M  A  W  I  S  L  A  S  I  T  I  R  L  H  I  S  K  I  A  Y  I  L  H  V  N  M  E  E  L  G  Q  R  V  P  F  *  I  L  E  K  K  T  V  S  T  L  V  N  L :   L  K  W  T  G  S  F  C  T  H  K  G  *  K  K  L  *  C  T  *  R  T  D  S  T  I  L  Q  W  S  S  P  K  M  :  A  L  L  R  M  I  I  *  I  L  Q  *  *  T  P  *  T  I  F  I  E  W  T  I  C  V  A  T  *  I  H  W  Q  M  Q  S  R  M  V  Q  M  *  G  G  T  L  F  G  P  F  S  T  T  L  S  G  *  M  D  I  S  *  D  L  D  F  T  M  S  T  I  L  I  F  R  E  P  Q  N  Y  Q  L  P  G  I  N  S  S  C  I  T  S  T  Y  N  L  K  K  I  L  P  R  T  S  G  R  E  K  T  M  K  S  G  G  F  L  R  L  F  S  F  C  V  C  C  W  K  T  V  Y  C  V  M  K  Q  I  S  G  Q  K  Y  S  I  E  N  *  L  *  L  S  R  F  I  D  E  K  E  E  N  </second_frame>
            <third_frame>   E  R  E  I  L  A  T  T  S  L  Y  F  S  C  N  V  L  S  N  S  N  L  H  V  V  L  *  F  H  N  I  I  M  S  S  N  R  Y  P  *  Y  Y  Q  K  K  S  *  P  S  F  N  F  K  Q  F  L  I  W  N  I  L  F  L  L  P   : V  *  R  S  Y  S  Q  *  W  K  R  S  Q  Q  L  G  C  F  Y  S  R  S  W :   S  Y  *  G  W  K  Q  R  R  C  C  C  *  S  L  Q  S  L  F   : G  G  R  *  A  H  G  R  F  G  C  *  W  L  S  F  L  Y  L  V  G  K  N  S  A  Q :   R  D  I  W  R  C  *  Y  G  W  N  *  A  L  Q  *  A  Y  *  C  T  L  T  E  R :   D  P  T  V  D  H  I  N  T  L  *  H  T  T  R  T  *  G  K  I  W  W  L  A  *  F  T  N  T  :  G  *  F  Q  L  L  C  R  H  M  L  Q  I  F  W  G  Q  S  Q  I  L  D  N  H  Q  *  A  *  P  Y  G  C  S  W  L  *  R  G  N  L  P  S  I  S  M  L  R  Y  I  W  E  L  *  C  W  *  F  R  K  G  A  L  H  C  S  S  Q  Y  D  P  I  S  C  S  C  Y  Q  Y  L  P  Y  Q  I  S   : E  K  T  R  R  N  D  R  N  F  F  G  Y  P  M  V  *  T  I  *  Q  F  L  R  R  H  S  R  S  *  E  S  S  V  I  L  R  Q  L  :  V  F  R  P  Y  Y  I  R  K  I  S  Q  R  N  G  T  N  S  G  I  *  S  A  R  L  F  K  E  *  F  E  Q  A  E  L  W  L  G  F  H  W  H  Q  L  L  Y  G  C  I  Y  Q  R  L  L  I  F  C  M  *  T  W  K  N  L  V  R  G  F  L  F  R  Y  *  R  K  R  R  C  L  H  W  S  T   : Y  *  S  G  L  A  L  S  V  P  T  R  D  E  K  N  C  D  V  H  E  G  Q  I  Q  Q  Y  S  N  G  H  H  R  K  W :   H  C  *  E  *  *  S  E  S  F  N  N  R  H  L  E  R  F  S  *  S  G  L  Y  A  *  L  L  K  F  I  G  K  C  N  H  G  W  C  R  C  E  G  V  L  C  L  V  P  S  R  Q  L  *  V  A  R  W  I  *  V  K  I  W  T  S  L  C  Q  L  Y  *  S  S  E  N  P  K  I  I  S  Y  Q  V  *  T  A  H  V  *  L  Q  H  T  T  *  K  K  Y  C  P  E  L  V  A  G  R  R  R  *  K  A  E  A  S  *  D  Y  F  H  S  V  S  V  V  G  R  Q  F  I  V  *  *  N  K  L  V  V  R  N  T  L  L  K  I  D  Y  N  Y  P  D  L  L  M  K  K  K  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30107" stop="30286"/>
                    <exon start="30364" stop="30430"/>
                    <exon start="30504" stop="30562"/>
                    <exon start="31314" stop="31389"/>
                    <exon start="31497" stop="31571"/>
                    <exon start="31677" stop="31764"/>
                    <exon start="31840" stop="32092"/>
                    <exon start="32397" stop="32512"/>
                    <exon start="32618" stop="32867"/>
                    <exon start="32994" stop="33096"/>
                    <exon start="33230" stop="33540"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1575</number_coding_nucleotides>
                  <number_encoded_amino_acids>525</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPLLSIFPAMFCRIAICMLFCSFIISSCHQTDILNIIKKNPNQVSTSSNFLFGTSSSCYQYEGAILSDGKGLNNWDVFTHEAGHIKDGSNGDVAVDHYNRYLEDVKLMEDLGVNGYRFSISWARILPKGTFGDVNMAGIEHYNKLIDALLQKGIQPLITLTHYDIPQELEERYGGWLSSRIQDDFSYYADICFKYFGDRVKYWTTINEPNLMAVRGYREGTYPPSRCSGIFGNCSAGDSEREPFIAAHNMILSHAAAISIYRTRYQKRQGGMIGISLDTQWFEPFSNSSEDIAAAERARSFYVNWFLDPIILGRYPKEMVQILGSNLPDFSKNDLSKLSYGLDFIGINYYTAAYIKDCLYSACEHGRTWSEGSFLDTREKDGVYIGQPTEVDWLFLYPQGMKKIVMYMKDRFNNTPMVITENGIAENDNLNPSIIDTLNDFHRVDYMRSYLNSLANAITDGADVRGYFVWSLLDNFEWLDGYKLRFGLHYVNYTNLQRTPKLSATRYKQLMYNFNIQLEKNTAQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="34304" PGL_stop="37277"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34304" e_stop="34576"/>
            <exon e_start="34647" e_stop="34713"/>
            <exon e_start="34942" e_stop="35000"/>
            <exon e_start="36590" e_stop="36665"/>
            <exon e_start="36763" e_stop="36837"/>
            <exon e_start="36947" e_stop="37034"/>
            <exon e_start="37109" e_stop="37277"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="0.763" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34304" e_stop="34576" e_length="273"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="34577" i_stop="34646" i_length="70"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34647" e_stop="34713" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="34714" i_stop="34941" i_length="228"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="34942" e_stop="35000" e_length="59"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.972">
            <gDNA_intron_boundary i_start="35001" i_stop="36589" i_length="1589"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="36590" e_stop="36665" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36666" i_stop="36762" i_length="97"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="36763" e_stop="36837" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.883" acc_prob="0.763">
            <gDNA_intron_boundary i_start="36838" i_stop="36946" i_length="109"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="36947" e_stop="37034" e_length="88"/>
          </exon>
          <intron i_serial="6" don_prob="0.975" acc_prob="0.994">
            <gDNA_intron_boundary i_start="37035" i_stop="37108" i_length="74"/>
          </intron>
          <exon e_serial="7" e_score="0.972">
            <gDNA_exon_boundary e_start="37109" e_stop="37277" e_length="169"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34304" stop="34576"/>
              <exon start="34647" stop="34713"/>
              <exon start="34942" stop="35000"/>
              <exon start="36590" stop="36665"/>
              <exon start="36763" stop="36837"/>
              <exon start="36947" stop="37034"/>
              <exon start="37109" stop="37250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34305" stop="34576"/>
              <exon start="34647" stop="34713"/>
              <exon start="34942" stop="35000"/>
              <exon start="36590" stop="36650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308712" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34338" stop="34576"/>
              <exon start="34647" stop="34713"/>
              <exon start="34942" stop="35000"/>
              <exon start="36590" stop="36665"/>
              <exon start="36763" stop="36837"/>
              <exon start="36947" stop="36982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34341" stop="34576"/>
              <exon start="34647" stop="34713"/>
              <exon start="34942" stop="35000"/>
              <exon start="36590" stop="36665"/>
              <exon start="36763" stop="36837"/>
              <exon start="36947" stop="37034"/>
              <exon start="37109" stop="37201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315210" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34348" stop="34576"/>
              <exon start="34647" stop="34713"/>
              <exon start="34942" stop="35000"/>
              <exon start="36590" stop="36665"/>
              <exon start="36763" stop="36837"/>
              <exon start="36947" stop="37034"/>
              <exon start="37109" stop="37277"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34438" stop="34576"/>
              <exon start="34647" stop="34713"/>
              <exon start="34942" stop="35000"/>
              <exon start="36590" stop="36665"/>
              <exon start="36763" stop="36837"/>
              <exon start="36947" stop="37034"/>
              <exon start="37109" stop="37208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606499" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGAGGTTGCAATTATTTGTGCCTTTTTCTCAGGAGCTTGAAAGAGAAATATCAATCACCACTTCTCTCTATTTTTCCTCATTCACTTAACAAATCAAAGCTGTATTATGCTTCCTGCAATGTTTTATCAAATAGCAATTTGCATGTTGTTTTGTGGTTTCATAGTATCATCATATCATCAAAAAGATATCCTTAATATTCTCAAAGAAAATCCTAATCAAGTTTCATCTTCAAACAATTTCTTGTTTGGGACAGCCTCTTCTTGTTACCAG : TTTGAAGGAGCATTTCTCAGTGATGGAAAAAGTCTCAACAATTGGGACATTTTTACTCACGAAGCTG : GTCATATTGAGGATGGAAGCAATGGAGATGTTGCCGTTGATCACTACAATCGTTATTTG : GAGGACATCAAGCTCATGGAAGACATGGGTGTGAATAGCTATCGTTTCTCCATCTCATGGGCAAGAATTCTGCCCA : AGGGGACATTTGGAGATGTTAATATGGCTGGAATTGAGCACTATAATAAGCTTATTGATGCACTCTTGCAGAAAG : GGATTGAACCGTTTATCACATTAACACATTATGACGTACCACAAGAACTTGAGGAAAGATATGGTGGTTGGCTTAGTTCACGAATACA : GGATGATTTCAGCTATTATGCAGACATATGCTTCAAATATTTTGGGGACAGAGTCAAATACTGGACAACCATCAATGAGCCTAACCTTATGGCTGTTCGTGGTTATAGAGAGGGAACTTACCCTCCAGCTCGATGCTCCGGTATATTTGGGAATTGTAGTGCTGGTGAT</gDNA_template>
            <first_frame> E  E  V  A  I  I  C  A  F  F  S  G  A  *  K  R  N  I  N  H  H  F  S  L  F  F  L  I  H  L  T  N  Q  S  C  I  M  L  P  A  M  F  Y  Q  I  A  I  C  M  L  F  C  G  F  I  V  S  S  Y  H  Q  K  D  I  L  N  I  L  K  E  N  P  N  Q  V  S  S  S  N  N  F  L  F  G  T  A  S  S  C  Y  Q  :  F  E  G  A  F  L  S  D  G  K  S  L  N  N  W  D  I  F  T  H  E  A   : G  H  I  E  D  G  S  N  G  D  V  A  V  D  H  Y  N  R  Y  L  :  E  D  I  K  L  M  E  D  M  G  V  N  S  Y  R  F  S  I  S  W  A  R  I  L  P   : K  G  T  F  G  D  V  N  M  A  G  I  E  H  Y  N  K  L  I  D  A  L  L  Q  K   : G  I  E  P  F  I  T  L  T  H  Y  D  V  P  Q  E  L  E  E  R  Y  G  G  W  L  S  S  R  I  Q :   D  D  F  S  Y  Y  A  D  I  C  F  K  Y  F  G  D  R  V  K  Y  W  T  T  I  N  E  P  N  L  M  A  V  R  G  Y  R  E  G  T  Y  P  P  A  R  C  S  G  I  F  G  N  C  S  A  G  D </first_frame>
            <second_frame>  K  R  L  Q  L  F  V  P  F  S  Q  E  L  E  R  E  I  S  I  T  T  S  L  Y  F  S  S  F  T  *  Q  I  K  A  V  L  C  F  L  Q  C  F  I  K  *  Q  F  A  C  C  F  V  V  S  *  Y  H  H  I  I  K  K  I  S  L  I  F  S  K  K  I  L  I  K  F  H  L  Q  T  I  S  C  L  G  Q  P  L  L  V  T  S :   L  K  E  H  F  S  V  M  E  K  V  S  T  I  G  T  F  L  L  T  K  L  :  V  I  L  R  M  E  A  M  E  M  L  P  L  I  T  T  I  V  I  W :   R  T  S  S  S  W  K  T  W  V  *  I  A  I  V  S  P  S  H  G  Q  E  F  C  P  :  R  G  H  L  E  M  L  I  W  L  E  L  S  T  I  I  S  L  L  M  H  S  C  R  K  :  G  L  N  R  L  S  H  *  H  I  M  T  Y  H  K  N  L  R  K  D  M  V  V  G  L  V  H  E  Y   : R  M  I  S  A  I  M  Q  T  Y  A  S  N  I  L  G  T  E  S  N  T  G  Q  P  S  M  S  L  T  L  W  L  F  V  V  I  E  R  E  L  T  L  Q  L  D  A  P  V  Y  L  G  I  V  V  L  V   </second_frame>
            <third_frame>   R  G  C  N  Y  L  C  L  F  L  R  S  L  K  E  K  Y  Q  S  P  L  L  S  I  F  P  H  S  L  N  K  S  K  L  Y  Y  A  S  C  N  V  L  S  N  S  N  L  H  V  V  L  W  F  H  S  I  I  I  S  S  K  R  Y  P  *  Y  S  Q  R  K  S  *  S  S  F  I  F  K  Q  F  L  V  W  D  S  L  F  L  L  P   : V  *  R  S  I  S  Q  *  W  K  K  S  Q  Q  L  G  H  F  Y  S  R  S  W :   S  Y  *  G  W  K  Q  W  R  C  C  R  *  S  L  Q  S  L  F   : G  G  H  Q  A  H  G  R  H  G  C  E  *  L  S  F  L  H  L  M  G  K  N  S  A  Q :   G  D  I  W  R  C  *  Y  G  W  N  *  A  L  *  *  A  Y  *  C  T  L  A  E  R :   D  *  T  V  Y  H  I  N  T  L  *  R  T  T  R  T  *  G  K  I  W  W  L  A  *  F  T  N  T  :  G  *  F  Q  L  L  C  R  H  M  L  Q  I  F  W  G  Q  S  Q  I  L  D  N  H  Q  *  A  *  P  Y  G  C  S  W  L  *  R  G  N  L  P  S  S  S  M  L  R  Y  I  W  E  L  *  C  W  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34346" stop="34576"/>
                    <exon start="34647" stop="34713"/>
                    <exon start="34942" stop="35000"/>
                    <exon start="36590" stop="36665"/>
                    <exon start="36763" stop="36837"/>
                    <exon start="36947" stop="37034"/>
                    <exon start="37109" stop="37277"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>765</number_coding_nucleotides>
                  <number_encoded_amino_acids>255</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRNINHHFSLFFLIHLTNQSCIMLPAMFYQIAICMLFCGFIVSSYHQKDILNILKENPNQVSSSNNFLFGTASSCYQFEGAFLSDGKSLNNWDIFTHEAGHIEDGSNGDVAVDHYNRYLEDIKLMEDMGVNSYRFSISWARILPKGTFGDVNMAGIEHYNKLIDALLQKGIEPFITLTHYDVPQELEERYGGWLSSRIQDDFSYYADICFKYFGDRVKYWTTINEPNLMAVRGYREGTYPPARCSGIFGNCSAGD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="37907" PGL_stop="38937"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37907" e_stop="38136"/>
            <exon e_start="38236" e_stop="38338"/>
            <exon e_start="38468" e_stop="38937"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37907" e_stop="38136" e_length="230"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.958">
            <gDNA_intron_boundary i_start="38137" i_stop="38235" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38236" e_stop="38338" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="38339" i_stop="38467" i_length="129"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="38468" e_stop="38937" e_length="470"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37907" stop="38136"/>
              <exon start="38236" stop="38338"/>
              <exon start="38468" stop="38937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549198" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGAAGATATCCCAAAGAAATGGTTCAAATTCTGGGATCTAATCTGCCAGACTTCTCAAAGAATGATTTGAGCAAGCTGAGTTATGGCTTAGATTTCATTGGCATCAATTACTATACGGCTAAATATATCAAAGATTGCTTATATTCTGCCTGTGAACATGGAAACACTTGGTCAGAGGGTTCCTATTTAGCTACAACAGAAAAAGACGGTGTCTACATTGGCCAACCA : ACTGGTGCTCCATGGATCTTTCTGTACCCACAAGGGATGAAAAAAATTGTGATGTACATGAGGGAGAGATTCAATAATACTCCAGTGGTTATCACTGAAAATG : GCATTGCTGAGAATGATAATCTGAATCCTTCAATAACGGACACCTTGAATGATAGTCATAGAGTGAACTATTTGTATAGCTGCTTAAATTCACTGGCAAATGCAATCAGGGAAGGTGCAGACGTGAGGGGGTACTTTGTTTGGTCCCTTCTTGACAACTTTGAGTGGCTACACGGATATAAGCTAAGATTTGGACTTCACTATGTCAACTATACTAATCTCCAGAGAACCCCAAAATTATCAGCTACCAGGTATAAACAACTCATGTATAACTTCCACATACAGCTTGAAACACATATTGCCCAGAACTAGTGGAAGAAGATGATGCAAAAGCAGAAGCTTGTAAGCAGCCTCATCCCTGCCTTCATATTACAAGAGTTAAGCTCAAATTTAACCTTGTATTCACTCCAATGGAACTGTAATCACGTAAGCAAGAAATTTTAATTATGCAGCAGAAATATTCTGTTGAAA</gDNA_template>
            <first_frame> *  E  D  I  P  K  K  W  F  K  F  W  D  L  I  C  Q  T  S  Q  R  M  I  *  A  S  *  V  M  A  *  I  S  L  A  S  I  T  I  R  L  N  I  S  K  I  A  Y  I  L  P  V  N  M  E  T  L  G  Q  R  V  P  I  *  L  Q  Q  K  K  T  V  S  T  L  A  N  Q :   L  V  L  H  G  S  F  C  T  H  K  G  *  K  K  L  *  C  T  *  G  R  D  S  I  I  L  Q  W  L  S  L  K  M  :  A  L  L  R  M  I  I  *  I  L  Q  *  R  T  P  *  M  I  V  I  E  *  T  I  C  I  A  A  *  I  H  W  Q  M  Q  S  G  K  V  Q  T  *  G  G  T  L  F  G  P  F  L  T  T  L  S  G  Y  T  D  I  S  *  D  L  D  F  T  M  S  T  I  L  I  S  R  E  P  Q  N  Y  Q  L  P  G  I  N  N  S  C  I  T  S  T  Y  S  L  K  H  I  L  P  R  T  S  G  R  R  *  C  K  S  R  S  L  *  A  A  S  S  L  P  S  Y  Y  K  S  *  A  Q  I  *  P  C  I  H  S  N  G  T  V  I  T  *  A  R  N  F  N  Y  A  A  E  I  F  C  *   </first_frame>
            <second_frame>  R  K  I  S  Q  R  N  G  S  N  S  G  I  *  S  A  R  L  L  K  E  *  F  E  Q  A  E  L  W  L  R  F  H  W  H  Q  L  L  Y  G  *  I  Y  Q  R  L  L  I  F  C  L  *  T  W  K  H  L  V  R  G  F  L  F  S  Y  N  R  K  R  R  C  L  H  W  P  T   : N  W  C  S  M  D  L  S  V  P  T  R  D  E  K  N  C  D  V  H  E  G  E  I  Q  *  Y  S  S  G  Y  H  *  K  W :   H  C  *  E  *  *  S  E  S  F  N  N  G  H  L  E  *  *  S  *  S  E  L  F  V  *  L  L  K  F  T  G  K  C  N  Q  G  R  C  R  R  E  G  V  L  C  L  V  P  S  *  Q  L  *  V  A  T  R  I  *  A  K  I  W  T  S  L  C  Q  L  Y  *  S  P  E  N  P  K  I  I  S  Y  Q  V  *  T  T  H  V  *  L  P  H  T  A  *  N  T  Y  C  P  E  L  V  E  E  D  D  A  K  A  E  A  C  K  Q  P  H  P  C  L  H  I  T  R  V  K  L  K  F  N  L  V  F  T  P  M  E  L  *  S  R  K  Q  E  I  L  I  M  Q  Q  K  Y  S  V  E  </second_frame>
            <third_frame>   G  R  Y  P  K  E  M  V  Q  I  L  G  S  N  L  P  D  F  S  K  N  D  L  S  K  L  S  Y  G  L  D  F  I  G  I  N  Y  Y  T  A  K  Y  I  K  D  C  L  Y  S  A  C  E  H  G  N  T  W  S  E  G  S  Y  L  A  T  T  E  K  D  G  V  Y  I  G  Q  P  :  T  G  A  P  W  I  F  L  Y  P  Q  G  M  K  K  I  V  M  Y  M  R  E  R  F  N  N  T  P  V  V  I  T  E  N   : G  I  A  E  N  D  N  L  N  P  S  I  T  D  T  L  N  D  S  H  R  V  N  Y  L  Y  S  C  L  N  S  L  A  N  A  I  R  E  G  A  D  V  R  G  Y  F  V  W  S  L  L  D  N  F  E  W  L  H  G  Y  K  L  R  F  G  L  H  Y  V  N  Y  T  N  L  Q  R  T  P  K  L  S  A  T  R  Y  K  Q  L  M  Y  N  F  H  I  Q  L  E  T  H  I  A  Q  N  *  W  K  K  M  M  Q  K  Q  K  L  V  S  S  L  I  P  A  F  I  L  Q  E  L  S  S  N  L  T  L  Y  S  L  Q  W  N  C  N  H  V  S  K  K  F  *  L  C  S  R  N  I  L  L  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37909" stop="38136"/>
                    <exon start="38236" stop="38338"/>
                    <exon start="38468" stop="38778"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRYPKEMVQILGSNLPDFSKNDLSKLSYGLDFIGINYYTAKYIKDCLYSACEHGNTWSEGSYLATTEKDGVYIGQPTGAPWIFLYPQGMKKIVMYMRERFNNTPVVITENGIAENDNLNPSITDTLNDSHRVNYLYSCLNSLANAIREGADVRGYFVWSLLDNFEWLHGYKLRFGLHYVNYTNLQRTPKLSATRYKQLMYNFHIQLETHIAQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="39446" PGL_stop="39100"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39446" e_stop="39100"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="39446" e_stop="39100" e_length="347"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39446" stop="39100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39446" stop="39100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39446" stop="39100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39446" stop="39100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39446" stop="39100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329030" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTAGTTGTGGAGTAGTCTTGAACTATGAAAAGGTGGGTAATATACCAGGATGTTGATGAGGAATTCACGGACACATTTCGGTCATTTGAAGGTACCCCATACCTTATCCTACTCTCGGAGTTTCTAAAGCAATGGTCTGCAGATAAGGTAGTCTTCCCTTGACCAAGGATCTTATTGTAGTAGTAGAGCATGTCTTCAGGGTCTCATTTTGAGGAATGTAAATACAATGTGCTGTCATAAATAGCATTTTTGGCTGATGTTGTAACACTAATTTCGTGAAGACAATGGAAAAAATAGTGGCAGTGAGTTTGTTATAATAGTCCATGCTTCTTGAATATAACTTTTC</gDNA_template>
            <first_frame> C  S  C  G  V  V  L  N  Y  E  K  V  G  N  I  P  G  C  *  *  G  I  H  G  H  I  S  V  I  *  R  Y  P  I  P  Y  P  T  L  G  V  S  K  A  M  V  C  R  *  G  S  L  P  L  T  K  D  L  I  V  V  V  E  H  V  F  R  V  S  F  *  G  M  *  I  Q  C  A  V  I  N  S  I  F  G  *  C  C  N  T  N  F  V  K  T  M  E  K  I  V  A  V  S  L  L  *  *  S  M  L  L  E  Y  N  F   </first_frame>
            <second_frame>  V  V  V  E  *  S  *  T  M  K  R  W  V  I  Y  Q  D  V  D  E  E  F  T  D  T  F  R  S  F  E  G  T  P  Y  L  I  L  L  S  E  F  L  K  Q  W  S  A  D  K  V  V  F  P  *  P  R  I  L  L  *  *  *  S  M  S  S  G  S  H  F  E  E  C  K  Y  N  V  L  S  *  I  A  F  L  A  D  V  V  T  L  I  S  *  R  Q  W  K  K  *  W  Q  *  V  C  Y  N  S  P  C  F  L  N  I  T  F  </second_frame>
            <third_frame>   *  L  W  S  S  L  E  L  *  K  G  G  *  Y  T  R  M  L  M  R  N  S  R  T  H  F  G  H  L  K  V  P  H  T  L  S  Y  S  R  S  F  *  S  N  G  L  Q  I  R  *  S  S  L  D  Q  G  S  Y  C  S  S  R  A  C  L  Q  G  L  I  L  R  N  V  N  T  M  C  C  H  K  *  H  F  W  L  M  L  *  H  *  F  R  E  D  N  G  K  N  S  G  S  E  F  V  I  I  V  H  A  S  *  I  *  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204D01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="43663" PGL_stop="42374"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43663" e_stop="43399"/>
            <exon e_start="43032" e_stop="42904"/>
            <exon e_start="42759" e_stop="42505"/>
            <exon e_start="42422" e_stop="42374"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.943" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.652" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.877" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43663" e_stop="43399" e_length="265"/>
          </exon>
          <intron i_serial="1" don_prob="0.943" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43398" i_stop="43033" i_length="366"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="43032" e_stop="42904" e_length="129"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.652">
            <gDNA_intron_boundary i_start="42903" i_stop="42760" i_length="144"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42759" e_stop="42505" e_length="255"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.877">
            <gDNA_intron_boundary i_start="42504" i_stop="42423" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42422" e_stop="42374" e_length="49"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43663" stop="43399"/>
              <exon start="43032" stop="42962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43644" stop="43399"/>
              <exon start="43032" stop="42904"/>
              <exon start="42759" stop="42505"/>
              <exon start="42422" stop="42374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343328" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACGATGGCTTTTGCCAGTGGCAGTTTCACTCCAATCGTGACCAATAGTTTGATTGCTTCTCGTTTATGGACCCCAAATTGGAGAAATGGGTTTTTTTCCCCTTTCAATATGGTGCACACATTTGCCTCATCTCGTAGCCGCCTGCTCAAGAACAAGAATCACTACAAAAGATTGGCCCTTTCATCCTGCAGTAAAAGCTTCTGCTGTCAGTCCACTGCTTTGTCTGATATCAATTCAACTTCTCACACTGTTTCTTCAAATGG : CCACCTTAGATATGGACGCTTGATGCCATGCCCTTTGCAGAACAGCCCACCTAGGGTTGAGCATCTTGTCGTCACAAAAGAAGGACCTGTTGTAGAATATATTTGTAAAGCTTTGGACCTCCCTCCATT : ATATGTGGAAGACCTTATACAGTTCGGAGCTGTGTATTACGCACTTGTATGTCCTAAGCCACCTCCGACTGCCAGTCCTGAGCAAATTAAAGTGTATGAAGAAGTTACAGATCCATCAGTTCTGAGAAAGAGAACTTCAATCAAAGGGAAAACTGTACGTGAAGCTCAGAAAACTTTCAAAATAACTCGTGCTGATGAAATTGTTGAAGCTGGAACGTATTTGCGGGTGCATGTACACCCTAAGCGCTTTCCAAG : GTGCTATGACATTGACTGGAAATCTCGTATTATTGCTGTAACCGACGAC</gDNA_template>
            <first_frame> R  R  W  L  L  P  V  A  V  S  L  Q  S  *  P  I  V  *  L  L  L  V  Y  G  P  Q  I  G  E  M  G  F  F  P  L  S  I  W  C  T  H  L  P  H  L  V  A  A  C  S  R  T  R  I  T  T  K  D  W  P  F  H  P  A  V  K  A  S  A  V  S  P  L  L  C  L  I  S  I  Q  L  L  T  L  F  L  Q  M   : A  T  L  D  M  D  A  *  C  H  A  L  C  R  T  A  H  L  G  L  S  I  L  S  S  Q  K  K  D  L  L  *  N  I  F  V  K  L  W  T  S  L  H   : Y  M  W  K  T  L  Y  S  S  E  L  C  I  T  H  L  Y  V  L  S  H  L  R  L  P  V  L  S  K  L  K  C  M  K  K  L  Q  I  H  Q  F  *  E  R  E  L  Q  S  K  G  K  L  Y  V  K  L  R  K  L  S  K  *  L  V  L  M  K  L  L  K  L  E  R  I  C  G  C  M  Y  T  L  S  A  F  Q   : G  A  M  T  L  T  G  N  L  V  L  L  L  *  P  T   </first_frame>
            <second_frame>  D  D  G  F  C  Q  W  Q  F  H  S  N  R  D  Q  *  F  D  C  F  S  F  M  D  P  K  L  E  K  W  V  F  F  P  F  Q  Y  G  A  H  I  C  L  I  S  *  P  P  A  Q  E  Q  E  S  L  Q  K  I  G  P  F  I  L  Q  *  K  L  L  L  S  V  H  C  F  V  *  Y  Q  F  N  F  S  H  C  F  F  K  W  :  P  P  *  I  W  T  L  D  A  M  P  F  A  E  Q  P  T  *  G  *  A  S  C  R  H  K  R  R  T  C  C  R  I  Y  L  *  S  F  G  P  P  S  I  :  I  C  G  R  P  Y  T  V  R  S  C  V  L  R  T  C  M  S  *  A  T  S  D  C  Q  S  *  A  N  *  S  V  *  R  S  Y  R  S  I  S  S  E  K  E  N  F  N  Q  R  E  N  C  T  *  S  S  E  N  F  Q  N  N  S  C  *  *  N  C  *  S  W  N  V  F  A  G  A  C  T  P  *  A  L  S  K  :  V  L  *  H  *  L  E  I  S  Y  Y  C  C  N  R  R  </second_frame>
            <third_frame>   T  M  A  F  A  S  G  S  F  T  P  I  V  T  N  S  L  I  A  S  R  L  W  T  P  N  W  R  N  G  F  F  S  P  F  N  M  V  H  T  F  A  S  S  R  S  R  L  L  K  N  K  N  H  Y  K  R  L  A  L  S  S  C  S  K  S  F  C  C  Q  S  T  A  L  S  D  I  N  S  T  S  H  T  V  S  S  N  G :   H  L  R  Y  G  R  L  M  P  C  P  L  Q  N  S  P  P  R  V  E  H  L  V  V  T  K  E  G  P  V  V  E  Y  I  C  K  A  L  D  L  P  P  L :   Y  V  E  D  L  I  Q  F  G  A  V  Y  Y  A  L  V  C  P  K  P  P  P  T  A  S  P  E  Q  I  K  V  Y  E  E  V  T  D  P  S  V  L  R  K  R  T  S  I  K  G  K  T  V  R  E  A  Q  K  T  F  K  I  T  R  A  D  E  I  V  E  A  G  T  Y  L  R  V  H  V  H  P  K  R  F  P  R :   C  Y  D  I  D  W  K  S  R  I  I  A  V  T  D  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43661" stop="43399"/>
                    <exon start="43032" stop="42904"/>
                    <exon start="42759" stop="42505"/>
                    <exon start="42422" stop="42374"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMAFASGSFTPIVTNSLIASRLWTPNWRNGFFSPFNMVHTFASSRSRLLKNKNHYKRLALSSCSKSFCCQSTALSDINSTSHTVSSNGHLRYGRLMPCPLQNSPPRVEHLVVTKEGPVVEYICKALDLPPLYVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTDD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="49598" PGL_stop="51746"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49598" e_stop="50364"/>
            <exon e_start="50874" e_stop="51746"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="0.974"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="49598" e_stop="50364" e_length="767"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50365" i_stop="50873" i_length="509"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="50874" e_stop="51746" e_length="873"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49598" stop="50329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546064" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49604" stop="50211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467211" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49604" stop="49891"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49712" stop="50204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315996" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49885" stop="50354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50288" stop="50364"/>
              <exon start="50874" stop="51449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396956" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50289" stop="50364"/>
              <exon start="50874" stop="51226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50292" stop="50364"/>
              <exon start="50874" stop="51492"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342413" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50908" stop="51360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51255" stop="51746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396955" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATAAAAAATATGGAGGTAATGGATATTCTATTACTTGGCTTAGCAATTCTCTTTTTATTTATATGGTGGAAATATTGGTCAATCACCGGTGGTGGAAAGAAAAATTTGCCACCGGGTCCTCCTGGTTGGCCATTGGTTGGAAATCTTTTTCAAGTTATTCTCCAACGTCGTCCATTTATTTACGTAGTACGTGATTTACGTAAAAAATATGGACCTATTTTCACCATGCAAATGGGACAACGTACCCTTGTTATAATTACTAGTTCCGAACTAATCCACGAGGCATTAGTTCAAAACGGCCCGCTTTTCGCGAGCCGTCCACCGGATTCACCGATCCGTTTGATATTCTCCGTGGGAAAGTGCGCCATCAACTCGGCGGAGTATGGCCCGTTGTGGCGCGCACTCCGACGCAATTTTGTTACGGAGTTGATTAATCCAACGAGGATTAAGCAGTGTAGTTGGATAAGGAAATGGGCTATGGAATATCATATGAAAAGGCTTGAGTATGAGGTTTCTGAGAATGGGTTCGTGGAAGTGATGGCTAATTGTAGGCTTACCATATGTAGCATTCTAATTTGTCTTTGTTTTGGAGCTAAAATTTCTGAAGAGAGAATTAAGAAGATTGAGAGTATACTTAAAGATGTTATGCTTATTACAGCTCCTCAACTTCCTGACTTTTTGCCAGTGCTTACACCCTTGTTTCGCAGCCAAGTGAAACAGGCAAAAAAATTGAGGCAGACTCAACTTGAGTACCTAACTCCTTTG : GTACGAGACAGAAAGGCATTTGTGGACAGCAATGGAGATCCTAATAGCAGTGAATCAGAAATGGTAAGTCCAATTGGTGCAGCCTATGTTGATTCATTATTTAGTCTCGAGCCACCTGGCAGGAAACTAGGAGAAGCAGAGATTATCACACTTGTTTCAGAAACAATAGGTGCAGGAACTGATACAAGTGCCACAGCACTTGAATGGGCATTGCTTCACTTAGTAATGAACCAAGAAATCCAAGAAAAACTCTACGAAGAAATAGTTGATTGTGTTGGTAAAAATGGTTCCATTTCAGAAAGTGATGTTGAAAAATTGCCTTATCTTGGAGCCATTGTGAAGGAGACTTTTAGAAGGCATCCACCTAGCCATTTTGTTTTATCACATTCTGTAACAAATGACACACAATTAGGTGGCTACAATATCCCTTCGGATGCTTATGTTGAATTTTACACCGCATGGTTAACGGAGGATCCGAGCCTATGGAAAGACCCGACCGAGTTTCGACCCGAAAGGTTTTTGACCGGGGACGGAGTTGACGTGGACTTAACCGGAATGAGAGGTGTCAAGATGCTACCATTCGGGGCGGGTCGTCGGATCTGCCCCGCTTGGTCATTGGGTACGTTGCACATTAATCTGATGCTTGCCAAGATGGTTCATAAATTCAAGTGGATACCCATACCCGGCAACCCACCCGACCCGACAGAGACCTTTGCTTTTACCGTAGTGATGAAAAATCCCCTCAAAGCAATTATTTTGCCAAGGATCTAAAATTAATTAATTTCAATATGTGTCTACGTACAATGTATTATATAAGCTCTTAGGTGGCTCCTTTTTAATGTTAAACAAATTACTATGGATACTGTTTCTTCA</gDNA_template>
            <first_frame> K  *  K  I  W  R  *  W  I  F  Y  Y  L  A  *  Q  F  S  F  Y  L  Y  G  G  N  I  G  Q  S  P  V  V  E  R  K  I  C  H  R  V  L  L  V  G  H  W  L  E  I  F  F  K  L  F  S  N  V  V  H  L  F  T  *  Y  V  I  Y  V  K  N  M  D  L  F  S  P  C  K  W  D  N  V  P  L  L  *  L  L  V  P  N  *  S  T  R  H  *  F  K  T  A  R  F  S  R  A  V  H  R  I  H  R  S  V  *  Y  S  P  W  E  S  A  P  S  T  R  R  S  M  A  R  C  G  A  H  S  D  A  I  L  L  R  S  *  L  I  Q  R  G  L  S  S  V  V  G  *  G  N  G  L  W  N  I  I  *  K  G  L  S  M  R  F  L  R  M  G  S  W  K  *  W  L  I  V  G  L  P  Y  V  A  F  *  F  V  F  V  L  E  L  K  F  L  K  R  E  L  R  R  L  R  V  Y  L  K  M  L  C  L  L  Q  L  L  N  F  L  T  F  C  Q  C  L  H  P  C  F  A  A  K  *  N  R  Q  K  N  *  G  R  L  N  L  S  T  *  L  L  W :   Y  E  T  E  R  H  L  W  T  A  M  E  I  L  I  A  V  N  Q  K  W  *  V  Q  L  V  Q  P  M  L  I  H  Y  L  V  S  S  H  L  A  G  N  *  E  K  Q  R  L  S  H  L  F  Q  K  Q  *  V  Q  E  L  I  Q  V  P  Q  H  L  N  G  H  C  F  T  *  *  *  T  K  K  S  K  K  N  S  T  K  K  *  L  I  V  L  V  K  M  V  P  F  Q  K  V  M  L  K  N  C  L  I  L  E  P  L  *  R  R  L  L  E  G  I  H  L  A  I  L  F  Y  H  I  L  *  Q  M  T  H  N  *  V  A  T  I  S  L  R  M  L  M  L  N  F  T  P  H  G  *  R  R  I  R  A  Y  G  K  T  R  P  S  F  D  P  K  G  F  *  P  G  T  E  L  T  W  T  *  P  E  *  E  V  S  R  C  Y  H  S  G  R  V  V  G  S  A  P  L  G  H  W  V  R  C  T  L  I  *  C  L  P  R  W  F  I  N  S  S  G  Y  P  Y  P  A  T  H  P  T  R  Q  R  P  L  L  L  P  *  *  *  K  I  P  S  K  Q  L  F  C  Q  G  S  K  I  N  *  F  Q  Y  V  S  T  Y  N  V  L  Y  K  L  L  G  G  S  F  L  M  L  N  K  L  L  W  I  L  F  L   </first_frame>
            <second_frame>  N  K  K  Y  G  G  N  G  Y  S  I  T  W  L  S  N  S  L  F  I  Y  M  V  E  I  L  V  N  H  R  W  W  K  E  K  F  A  T  G  S  S  W  L  A  I  G  W  K  S  F  S  S  Y  S  P  T  S  S  I  Y  L  R  S  T  *  F  T  *  K  I  W  T  Y  F  H  H  A  N  G  T  T  Y  P  C  Y  N  Y  *  F  R  T  N  P  R  G  I  S  S  K  R  P  A  F  R  E  P  S  T  G  F  T  D  P  F  D  I  L  R  G  K  V  R  H  Q  L  G  G  V  W  P  V  V  A  R  T  P  T  Q  F  C  Y  G  V  D  *  S  N  E  D  *  A  V  *  L  D  K  E  M  G  Y  G  I  S  Y  E  K  A  *  V  *  G  F  *  E  W  V  R  G  S  D  G  *  L  *  A  Y  H  M  *  H  S  N  L  S  L  F  W  S  *  N  F  *  R  E  N  *  E  D  *  E  Y  T  *  R  C  Y  A  Y  Y  S  S  S  T  S  *  L  F  A  S  A  Y  T  L  V  S  Q  P  S  E  T  G  K  K  I  E  A  D  S  T  *  V  P  N  S  F   : G  T  R  Q  K  G  I  C  G  Q  Q  W  R  S  *  *  Q  *  I  R  N  G  K  S  N  W  C  S  L  C  *  F  I  I  *  S  R  A  T  W  Q  E  T  R  R  S  R  D  Y  H  T  C  F  R  N  N  R  C  R  N  *  Y  K  C  H  S  T  *  M  G  I  A  S  L  S  N  E  P  R  N  P  R  K  T  L  R  R  N  S  *  L  C  W  *  K  W  F  H  F  R  K  *  C  *  K  I  A  L  S  W  S  H  C  E  G  D  F  *  K  A  S  T  *  P  F  C  F  I  T  F  C  N  K  *  H  T  I  R  W  L  Q  Y  P  F  G  C  L  C  *  I  L  H  R  M  V  N  G  G  S  E  P  M  E  R  P  D  R  V  S  T  R  K  V  F  D  R  G  R  S  *  R  G  L  N  R  N  E  R  C  Q  D  A  T  I  R  G  G  S  S  D  L  P  R  L  V  I  G  Y  V  A  H  *  S  D  A  C  Q  D  G  S  *  I  Q  V  D  T  H  T  R  Q  P  T  R  P  D  R  D  L  C  F  Y  R  S  D  E  K  S  P  Q  S  N  Y  F  A  K  D  L  K  L  I  N  F  N  M  C  L  R  T  M  Y  Y  I  S  S  *  V  A  P  F  *  C  *  T  N  Y  Y  G  Y  C  F  F  </second_frame>
            <third_frame>   I  K  N  M  E  V  M  D  I  L  L  L  G  L  A  I  L  F  L  F  I  W  W  K  Y  W  S  I  T  G  G  G  K  K  N  L  P  P  G  P  P  G  W  P  L  V  G  N  L  F  Q  V  I  L  Q  R  R  P  F  I  Y  V  V  R  D  L  R  K  K  Y  G  P  I  F  T  M  Q  M  G  Q  R  T  L  V  I  I  T  S  S  E  L  I  H  E  A  L  V  Q  N  G  P  L  F  A  S  R  P  P  D  S  P  I  R  L  I  F  S  V  G  K  C  A  I  N  S  A  E  Y  G  P  L  W  R  A  L  R  R  N  F  V  T  E  L  I  N  P  T  R  I  K  Q  C  S  W  I  R  K  W  A  M  E  Y  H  M  K  R  L  E  Y  E  V  S  E  N  G  F  V  E  V  M  A  N  C  R  L  T  I  C  S  I  L  I  C  L  C  F  G  A  K  I  S  E  E  R  I  K  K  I  E  S  I  L  K  D  V  M  L  I  T  A  P  Q  L  P  D  F  L  P  V  L  T  P  L  F  R  S  Q  V  K  Q  A  K  K  L  R  Q  T  Q  L  E  Y  L  T  P  L  :  V  R  D  R  K  A  F  V  D  S  N  G  D  P  N  S  S  E  S  E  M  V  S  P  I  G  A  A  Y  V  D  S  L  F  S  L  E  P  P  G  R  K  L  G  E  A  E  I  I  T  L  V  S  E  T  I  G  A  G  T  D  T  S  A  T  A  L  E  W  A  L  L  H  L  V  M  N  Q  E  I  Q  E  K  L  Y  E  E  I  V  D  C  V  G  K  N  G  S  I  S  E  S  D  V  E  K  L  P  Y  L  G  A  I  V  K  E  T  F  R  R  H  P  P  S  H  F  V  L  S  H  S  V  T  N  D  T  Q  L  G  G  Y  N  I  P  S  D  A  Y  V  E  F  Y  T  A  W  L  T  E  D  P  S  L  W  K  D  P  T  E  F  R  P  E  R  F  L  T  G  D  G  V  D  V  D  L  T  G  M  R  G  V  K  M  L  P  F  G  A  G  R  R  I  C  P  A  W  S  L  G  T  L  H  I  N  L  M  L  A  K  M  V  H  K  F  K  W  I  P  I  P  G  N  P  P  D  P  T  E  T  F  A  F  T  V  V  M  K  N  P  L  K  A  I  I  L  P  R  I  *  N  *  L  I  S  I  C  V  Y  V  Q  C  I  I  *  A  L  R  W  L  L  F  N  V  K  Q  I  T  M  D  T  V  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49600" stop="50364"/>
                    <exon start="50874" stop="51644"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1533</number_coding_nucleotides>
                  <number_encoded_amino_acids>511</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKNMEVMDILLLGLAILFLFIWWKYWSITGGGKKNLPPGPPGWPLVGNLFQVILQRRPFIYVVRDLRKKYGPIFTMQMGQRTLVIITSSELIHEALVQNGPLFASRPPDSPIRLIFSVGKCAINSAEYGPLWRALRRNFVTELINPTRIKQCSWIRKWAMEYHMKRLEYEVSENGFVEVMANCRLTICSILICLCFGAKISEERIKKIESILKDVMLITAPQLPDFLPVLTPLFRSQVKQAKKLRQTQLEYLTPLVRDRKAFVDSNGDPNSSESEMVSPIGAAYVDSLFSLEPPGRKLGEAEIITLVSETIGAGTDTSATALEWALLHLVMNQEIQEKLYEEIVDCVGKNGSISESDVEKLPYLGAIVKETFRRHPPSHFVLSHSVTNDTQLGGYNIPSDAYVEFYTAWLTEDPSLWKDPTEFRPERFLTGDGVDVDLTGMRGVKMLPFGAGRRICPAWSLGTLHINLMLAKMVHKFKWIPIPGNPPDPTETFAFTVVMKNPLKAIILPRI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="50377" PGL_stop="49737"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50377" e_stop="49737"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="50377" e_stop="49737" e_length="641"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50377" stop="49737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E620762" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTAAACTTACCAAAGGAGTTAGGTACTCAAGTTGAGTCTGCCTCAATTTTTTTGCCTGTTTCACTTGGCTGCGAAACAAGGGTGTAAGCACTGGCAAAAAGTCAGGAAGTTGAGGAGCTGTAATAAGCATAACATCTTTAAGTATACTCTCAATCTTCTTAATTCTCTCTTCAGAAATTTTAGCTCCAAAACAAAGACAAATTAGAATGCTACATATGGTAAGCCTACAATTAGCCATCACTTCCACGAACCCATTCTCAGAAACCTCATACTCAAGCCTTTTCATATGATATTCCATAGCCCATTTCCTTATCCAACTACACTGCTTAATCCTCGTTGGATTAATCAACTCCGTAACAAAATTGCGTCGGAGTGCGCGCCACAACGGGCCATACTCCGCCGAGTTGATGGCGCACTTTCCCACGGAGAATATCAAACGGATCGGTGAATCCGGTGGACGGCTCGCGAAAAGCGGGCCGTTTTGAACTAATGCCTCGTGGATTAGTTCGGAACTAGTAATTATAACAAGGGTACGTTGTCCCATTTGCATGGTGAAAATAGGTCCATATTTTTTACGTAAATCACGTACTACGTAAATAAATGGACGACGTTGGAGAATAACTTGAAAAAGATTTCCA</gDNA_template>
            <first_frame> N  L  N  L  P  K  E  L  G  T  Q  V  E  S  A  S  I  F  L  P  V  S  L  G  C  E  T  R  V  *  A  L  A  K  S  Q  E  V  E  E  L  *  *  A  *  H  L  *  V  Y  S  Q  S  S  *  F  S  L  Q  K  F  *  L  Q  N  K  D  K  L  E  C  Y  I  W  *  A  Y  N  *  P  S  L  P  R  T  H  S  Q  K  P  H  T  Q  A  F  S  Y  D  I  P  *  P  I  S  L  S  N  Y  T  A  *  S  S  L  D  *  S  T  P  *  Q  N  C  V  G  V  R  A  T  T  G  H  T  P  P  S  *  W  R  T  F  P  R  R  I  S  N  G  S  V  N  P  V  D  G  S  R  K  A  G  R  F  E  L  M  P  R  G  L  V  R  N  *  *  L  *  Q  G  Y  V  V  P  F  A  W  *  K  *  V  H  I  F  Y  V  N  H  V  L  R  K  *  M  D  D  V  G  E  *  L  E  K  D  F   </first_frame>
            <second_frame>  I  *  T  Y  Q  R  S  *  V  L  K  L  S  L  P  Q  F  F  C  L  F  H  L  A  A  K  Q  G  C  K  H  W  Q  K  V  R  K  L  R  S  C  N  K  H  N  I  F  K  Y  T  L  N  L  L  N  S  L  F  R  N  F  S  S  K  T  K  T  N  *  N  A  T  Y  G  K  P  T  I  S  H  H  F  H  E  P  I  L  R  N  L  I  L  K  P  F  H  M  I  F  H  S  P  F  P  Y  P  T  T  L  L  N  P  R  W  I  N  Q  L  R  N  K  I  A  S  E  C  A  P  Q  R  A  I  L  R  R  V  D  G  A  L  S  H  G  E  Y  Q  T  D  R  *  I  R  W  T  A  R  E  K  R  A  V  L  N  *  C  L  V  D  *  F  G  T  S  N  Y  N  K  G  T  L  S  H  L  H  G  E  N  R  S  I  F  F  T  *  I  T  Y  Y  V  N  K  W  T  T  L  E  N  N  L  K  K  I  S  </second_frame>
            <third_frame>   F  K  L  T  K  G  V  R  Y  S  S  *  V  C  L  N  F  F  A  C  F  T  W  L  R  N  K  G  V  S  T  G  K  K  S  G  S  *  G  A  V  I  S  I  T  S  L  S  I  L  S  I  F  L  I  L  S  S  E  I  L  A  P  K  Q  R  Q  I  R  M  L  H  M  V  S  L  Q  L  A  I  T  S  T  N  P  F  S  E  T  S  Y  S  S  L  F  I  *  Y  S  I  A  H  F  L  I  Q  L  H  C  L  I  L  V  G  L  I  N  S  V  T  K  L  R  R  S  A  R  H  N  G  P  Y  S  A  E  L  M  A  H  F  P  T  E  N  I  K  R  I  G  E  S  G  G  R  L  A  K  S  G  P  F  *  T  N  A  S  W  I  S  S  E  L  V  I  I  T  R  V  R  C  P  I  C  M  V  K  I  G  P  Y  F  L  R  K  S  R  T  T  *  I  N  G  R  R  W  R  I  T  *  K  R  F  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50169" stop="49927"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NATYGKPTISHHFHEPILRNLILKPFHMIFHSPFPYPTTLLNPRWINQLRNKIASECAPQRAILRRVDGALSHGEYQTDR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50084" stop="49890"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSIAHFLIQLHCLILVGLINSVTKLRRSARHNGPYSAELMAHFPTENIKRIGESGGRLAKSGPF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="52842" PGL_stop="53881"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52842" e_stop="53881"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="52842" e_stop="53881" e_length="1040"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52842" stop="53558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52842" stop="53242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53403" stop="53640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53404" stop="53881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGTATTGGTAGTATTGTAAACCCTACTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGACTTGATGAATTGATGGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGGACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGGACCGACACGTAGAATTAGGGGATCGGAGTGTCACGTACCGACACAAGATGATTAATGAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTCAAAAGATGTTAATATACTCAATCTAATGAACATAATTCCCAAATGAGTATGATATTGAGGCTTGAGTCCTCATGCGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATGGCTGATTTTATGATATTACTTGGTATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTAACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGTCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</gDNA_template>
            <first_frame> *  S  S  V  E  V  G  Y  G  F  H  A  F  I  V  N  S  *  *  R  M  I  C  I  G  S  I  V  N  P  T  M  C  L  I  V  C  M  H  E  R  D  Y  I  I  V  I  I  L  S  M  M  K  L  L  N  P  K  S  *  *  K  P  N  L  F  L  M  M  M  P  W  *  G  R  R  L  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  D  L  M  N  *  W  K  E  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  Y  *  G  I  G  C  H  G  P  T  R  S  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  V  S  R  T  D  T  R  *  L  M  N  M  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  Q  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  D  I  E  A  *  V  L  M  R  E  L  D  G  N  C  *  *  Y  S  T  C  C  C  Y  M  L  S  I  M  A  D  F  M  I  L  L  G  I  Y  *  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  S  L  L  V  Y  L  W  S  A  A  N  V  S  S  S  S  T  Q  Q  *  F  K  P  V  L  L  H  R  K  F  R  V  S  *  C  F  *  L  G   </first_frame>
            <second_frame>  N  L  R  W  R  *  V  M  V  F  M  L  S  *  *  T  L  N  R  E  *  Y  V  L  V  V  L  *  T  L  L  C  A  *  L  Y  A  C  M  N  V  I  I  *  L  *  L  Y  *  A  *  *  S  Y  *  I  P  N  L  D  K  N  L  I  S  F  *  *  *  C  L  G  K  G  E  G  L  M  N  *  S  N  E  I  D  D  A  L  V  R  K  K  T  *  *  I  D  G  R  R  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  S  I  R  G  S  G  V  T  D  R  H  V  V  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  G  P  T  R  R  I  R  G  S  E  C  H  V  P  T  Q  D  D  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  K  R  C  *  Y  T  Q  S  N  E  H  N  S  Q  M  S  M  I  L  R  L  E  S  S  C  V  N  L  T  V  I  V  N  D  I  V  L  V  V  A  T  C  *  V  S  W  L  I  L  *  Y  Y  L  V  Y  I  D  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  N  P  Y  F  Y  V  L  F  L  F  I  C  G  V  Q  Q  T  C  H  R  L  Q  L  N  S  N  S  S  Q  S  Y  Y  I  G  N  S  G  *  A  N  A  S  S  L  D  </second_frame>
            <third_frame>   I  F  G  G  G  R  L  W  F  S  C  F  H  S  K  L  L  I  E  N  D  M  Y  W  *  Y  C  K  P  Y  Y  V  L  N  C  M  H  A  *  T  *  L  Y  N  C  D  Y  I  K  H  D  E  V  I  E  S  Q  I  L  I  K  T  *  S  L  F  N  D  D  A  L  V  R  E  K  A  *  *  T  K  V  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  M  E  G  D  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  V  L  G  D  R  V  S  R  T  D  T  *  Y  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  D  R  H  V  E  L  G  D  R  S  V  T  Y  R  H  K  M  I  N  E  Y  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  S  K  D  V  N  I  L  N  L  M  N  I  I  P  K  *  V  *  Y  *  G  L  S  P  H  A  *  T  *  R  *  L  L  M  I  *  Y  L  L  L  L  H  V  E  Y  H  G  *  F  Y  D  I  T  W  Y  I  L  I  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  C  S  K  R  V  I  V  F  N  S  T  V  I  Q  A  S  L  T  T  S  E  I  Q  G  E  L  M  L  L  A  W  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53666" stop="53881"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDITWYILISILSWPMISTQYPCFVLTPTFMFSSCLFVECSKRVIVFNSTVIQASLTTSEIQGELMLLAWT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="53729" PGL_stop="53417"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53729" e_stop="53417"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="53729" e_stop="53417" e_length="313"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53729" stop="53417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATATCATAAAATCAGCCATGATACTCAACATGTAGCAACAACAAGTACTATATCATTAACAATTACCGTCAAGTTCACGCATGAGGACTCAAGCCTCAATATCATACTCATTTGGGAATTATGTTCATTAGATTGAGTATATTAACATCTTTTGAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCATATTCATTAATCATCTTGTGTCGGTACGTGACACTCCGATCCCCTAATTCTAC</gDNA_template>
            <first_frame> T  E  *  I  S  S  A  N  S  K  *  K  S  I  Y  T  K  *  Y  H  K  I  S  H  D  T  Q  H  V  A  T  T  S  T  I  S  L  T  I  T  V  K  F  T  H  E  D  S  S  L  N  I  I  L  I  W  E  L  C  S  L  D  *  V  Y  *  H  L  L  R  F  I  I  F  I  S  L  V  S  V  R  D  T  P  L  P  H  I  H  *  S  S  C  V  G  T  *  H  S  D  P  L  I  L  </first_frame>
            <second_frame>  L  S  R  Y  H  R  P  T  Q  N  R  N  Q  Y  I  P  S  N  I  I  K  S  A  M  I  L  N  M  *  Q  Q  Q  V  L  Y  H  *  Q  L  P  S  S  S  R  M  R  T  Q  A  S  I  S  Y  S  F  G  N  Y  V  H  *  I  E  Y  I  N  I  F  *  D  S  L  S  L  F  L  L  C  R  Y  V  T  L  R  S  L  I  F  I  N  H  L  V  S  V  R  D  T  P  I  P  *  F  Y </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  I  N  I  Y  Q  V  I  S  *  N  Q  P  *  Y  S  T  C  S  N  N  K  Y  Y  I  I  N  N  Y  R  Q  V  H  A  *  G  L  K  P  Q  Y  H  T  H  L  G  I  M  F  I  R  L  S  I  L  T  S  F  E  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  Y  S  L  I  I  L  C  R  Y  V  T  L  R  S  P  N  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204D01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="69467" PGL_stop="71649"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69467" e_stop="69789"/>
            <exon e_start="69867" e_stop="70083"/>
            <exon e_start="70208" e_stop="70297"/>
            <exon e_start="71049" e_stop="71649"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.759" e_score="0.994"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.759" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="69467" e_stop="69789" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.759">
            <gDNA_intron_boundary i_start="69790" i_stop="69866" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="69867" e_stop="70083" e_length="217"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="70084" i_stop="70207" i_length="124"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="70208" e_stop="70297" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="0.759" acc_prob="0.995">
            <gDNA_intron_boundary i_start="70298" i_stop="71048" i_length="751"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71049" e_stop="71649" e_length="601"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69467" stop="69789"/>
              <exon start="69867" stop="70017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69910" stop="70083"/>
              <exon start="70208" stop="70297"/>
              <exon start="71049" stop="71076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277863" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70215" stop="70297"/>
              <exon start="71049" stop="71434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71311" stop="71649"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200632" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAATACTCAGAAAGCAACTCCAGGATCAACTTTTCCGACACCTTTTGCTTCTCCATTGTTCACTGGGAGTTTCCCTTCAAGCCCTCTCTTATACAGTCCTGATATTGGGGCTCATAGGGTTGGTAGAATTGATTTAGTTCCACCACTAAGCTTGGATGGATTACAATCTGCAAAAACAACCGTCTCACCGCCCGATTCTCCTCGAAAACATCGACAGCTTTCGTTGCCTGTACAATCTTTGTATGAGAAGCTAAAGAATTCCCCTCAGGTTGGAGTTGTGCACTTGGCACTGCAAAATGATACATCTGGCTCTGTACTGAG : TTGGCAGAATGATGTATTTGTGGTTGCCGAACCTGGAGAACTAGCAGATAAGTTTCTGCAGAGTGTCAAATTCAGCTTGTTGTCTATGATGCGAGGCCGCCGGAGAAAGTATGCATCAGTCATCTCTGACATCTCAACCGTTGCTGATCTTGTTAGGTGTAGGCCATGCTTCCAAATTGGGGGTGTAGTCCACCGTTATATTGGGCGTCAGACACAG : GTCATGGAAGATGACCAAGAAATTGGTGCCTATATGTTCCGTAGGACGGTTCCTTCAATGCATTTAACTTCAGAAGATATTCGGTGGATG : GTTGGAGCATGGAGGGAGAGAATTATAATCTTCACTGGTTTCTATGGCCCTATCCAACCTGTAATCAAGGCTTTTCTAGATTCAGGAGCAAAAGCTGTTATATGTCCTTCCTCTGAGCCTGATGAAGTGCAGTTGTCTACATTTCACGGGTCAGGTGATTTTAATTCTTTCGATAATGGAAAGTTTGAAATTGGCGAAGAAGAAGCAGAGGATGACGATACTGAACCTACTAGTCCAGCAAGTGATTGGGATGATAGTGAGCCAGATGAAAGTGAAGGACGCTCTCAATTCTTTTGGGATGATGATGAGGGGGAGTTGTCCCAATTCATATGTCAATTCTATGAGTCTCTCTTTCAGGGTGGTTCAAGAATAGGTGCTGCATTGCAGCAGGCTCGTGCCTCGCACCGTAGCCTAAGGTATTCATGCCATCTTCCCAGCATACCATAGTTCGTCGGGGTACTCATACCATGATAGTCTCAAGGAAGGCGCAAGTCAGTCAATGCTTATGCTGACTGCATGTTGCTTGATTAAGGCAATTTGTGCTCTCTCTACATTATTCCATACTTTGTAAAGAAGAACTATACTTGTACAAGCAAAGGAA</gDNA_template>
            <first_frame> S  N  T  Q  K  A  T  P  G  S  T  F  P  T  P  F  A  S  P  L  F  T  G  S  F  P  S  S  P  L  L  Y  S  P  D  I  G  A  H  R  V  G  R  I  D  L  V  P  P  L  S  L  D  G  L  Q  S  A  K  T  T  V  S  P  P  D  S  P  R  K  H  R  Q  L  S  L  P  V  Q  S  L  Y  E  K  L  K  N  S  P  Q  V  G  V  V  H  L  A  L  Q  N  D  T  S  G  S  V  L  S :   W  Q  N  D  V  F  V  V  A  E  P  G  E  L  A  D  K  F  L  Q  S  V  K  F  S  L  L  S  M  M  R  G  R  R  R  K  Y  A  S  V  I  S  D  I  S  T  V  A  D  L  V  R  C  R  P  C  F  Q  I  G  G  V  V  H  R  Y  I  G  R  Q  T  Q  :  V  M  E  D  D  Q  E  I  G  A  Y  M  F  R  R  T  V  P  S  M  H  L  T  S  E  D  I  R  W  M  :  V  G  A  W  R  E  R  I  I  I  F  T  G  F  Y  G  P  I  Q  P  V  I  K  A  F  L  D  S  G  A  K  A  V  I  C  P  S  S  E  P  D  E  V  Q  L  S  T  F  H  G  S  G  D  F  N  S  F  D  N  G  K  F  E  I  G  E  E  E  A  E  D  D  D  T  E  P  T  S  P  A  S  D  W  D  D  S  E  P  D  E  S  E  G  R  S  Q  F  F  W  D  D  D  E  G  E  L  S  Q  F  I  C  Q  F  Y  E  S  L  F  Q  G  G  S  R  I  G  A  A  L  Q  Q  A  R  A  S  H  R  S  L  R  Y  S  C  H  L  P  S  I  P  *  F  V  G  V  L  I  P  *  *  S  Q  G  R  R  K  S  V  N  A  Y  A  D  C  M  L  L  D  *  G  N  L  C  S  L  Y  I  I  P  Y  F  V  K  K  N  Y  T  C  T  S  K  G  </first_frame>
            <second_frame>  Q  I  L  R  K  Q  L  Q  D  Q  L  F  R  H  L  L  L  L  H  C  S  L  G  V  S  L  Q  A  L  S  Y  T  V  L  I  L  G  L  I  G  L  V  E  L  I  *  F  H  H  *  A  W  M  D  Y  N  L  Q  K  Q  P  S  H  R  P  I  L  L  E  N  I  D  S  F  R  C  L  Y  N  L  C  M  R  S  *  R  I  P  L  R  L  E  L  C  T  W  H  C  K  M  I  H  L  A  L  Y  *   : V  G  R  M  M  Y  L  W  L  P  N  L  E  N  *  Q  I  S  F  C  R  V  S  N  S  A  C  C  L  *  C  E  A  A  G  E  S  M  H  Q  S  S  L  T  S  Q  P  L  L  I  L  L  G  V  G  H  A  S  K  L  G  V  *  S  T  V  I  L  G  V  R  H  R :   S  W  K  M  T  K  K  L  V  P  I  C  S  V  G  R  F  L  Q  C  I  *  L  Q  K  I  F  G  G  W :   L  E  H  G  G  R  E  L  *  S  S  L  V  S  M  A  L  S  N  L  *  S  R  L  F  *  I  Q  E  Q  K  L  L  Y  V  L  P  L  S  L  M  K  C  S  C  L  H  F  T  G  Q  V  I  L  I  L  S  I  M  E  S  L  K  L  A  K  K  K  Q  R  M  T  I  L  N  L  L  V  Q  Q  V  I  G  M  I  V  S  Q  M  K  V  K  D  A  L  N  S  F  G  M  M  M  R  G  S  C  P  N  S  Y  V  N  S  M  S  L  S  F  R  V  V  Q  E  *  V  L  H  C  S  R  L  V  P  R  T  V  A  *  G  I  H  A  I  F  P  A  Y  H  S  S  S  G  Y  S  Y  H  D  S  L  K  E  G  A  S  Q  S  M  L  M  L  T  A  C  C  L  I  K  A  I  C  A  L  S  T  L  F  H  T  L  *  R  R  T  I  L  V  Q  A  K  E </second_frame>
            <third_frame>   K  Y  S  E  S  N  S  R  I  N  F  S  D  T  F  C  F  S  I  V  H  W  E  F  P  F  K  P  S  L  I  Q  S  *  Y  W  G  S  *  G  W  *  N  *  F  S  S  T  T  K  L  G  W  I  T  I  C  K  N  N  R  L  T  A  R  F  S  S  K  T  S  T  A  F  V  A  C  T  I  F  V  *  E  A  K  E  F  P  S  G  W  S  C  A  L  G  T  A  K  *  Y  I  W  L  C  T  E  :  L  A  E  *  C  I  C  G  C  R  T  W  R  T  S  R  *  V  S  A  E  C  Q  I  Q  L  V  V  Y  D  A  R  P  P  E  K  V  C  I  S  H  L  *  H  L  N  R  C  *  S  C  *  V  *  A  M  L  P  N  W  G  C  S  P  P  L  Y  W  A  S  D  T   : G  H  G  R  *  P  R  N  W  C  L  Y  V  P  *  D  G  S  F  N  A  F  N  F  R  R  Y  S  V  D   : G  W  S  M  E  G  E  N  Y  N  L  H  W  F  L  W  P  Y  P  T  C  N  Q  G  F  S  R  F  R  S  K  S  C  Y  M  S  F  L  *  A  *  *  S  A  V  V  Y  I  S  R  V  R  *  F  *  F  F  R  *  W  K  V  *  N  W  R  R  R  S  R  G  *  R  Y  *  T  Y  *  S  S  K  *  L  G  *  *  *  A  R  *  K  *  R  T  L  S  I  L  L  G  *  *  *  G  G  V  V  P  I  H  M  S  I  L  *  V  S  L  S  G  W  F  K  N  R  C  C  I  A  A  G  S  C  L  A  P  *  P  K  V  F  M  P  S  S  Q  H  T  I  V  R  R  G  T  H  T  M  I  V  S  R  K  A  Q  V  S  Q  C  L  C  *  L  H  V  A  *  L  R  Q  F  V  L  S  L  H  Y  S  I  L  C  K  E  E  L  Y  L  Y  K  Q  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69467" stop="69789"/>
                    <exon start="69867" stop="70083"/>
                    <exon start="70208" stop="70297"/>
                    <exon start="71049" stop="71495"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1074</number_coding_nucleotides>
                  <number_encoded_amino_acids>358</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNTQKATPGSTFPTPFASPLFTGSFPSSPLLYSPDIGAHRVGRIDLVPPLSLDGLQSAKTTVSPPDSPRKHRQLSLPVQSLYEKLKNSPQVGVVHLALQNDTSGSVLSWQNDVFVVAEPGELADKFLQSVKFSLLSMMRGRRRKYASVISDISTVADLVRCRPCFQIGGVVHRYIGRQTQVMEDDQEIGAYMFRRTVPSMHLTSEDIRWMVGAWRERIIIFTGFYGPIQPVIKAFLDSGAKAVICPSSEPDEVQLSTFHGSGDFNSFDNGKFEIGEEEAEDDDTEPTSPASDWDDSEPDESEGRSQFFWDDDEGELSQFICQFYESLFQGGSRIGAALQQARASHRSLRYSCHLPSIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="73946" PGL_stop="75008"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73946" e_stop="74628"/>
            <exon e_start="74724" e_stop="75008"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.838" acc_prob="0.582" e_score="0.998"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="73946" e_stop="74628" e_length="683"/>
          </exon>
          <intron i_serial="1" don_prob="0.838" acc_prob="0.582">
            <gDNA_intron_boundary i_start="74629" i_stop="74723" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="74724" e_stop="75008" e_length="285"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73946" stop="74512"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541376" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73947" stop="74579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74123" stop="74628"/>
              <exon start="74724" stop="75008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541373" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAATATAAGATGAATAAGAAAGGAGGCAGCACTAACTCCTCCAGTATTTGTTAAACCTTCCAGATTGTAGCATGGAGGGGGAGAATTATAATCTTCACTGGCCCTACCCAATTTGTAGTCAAGGTTTTTCTAGATTCAGGAGCTAAAGCTGTTGCATGTCCTTCCATTGAGCCCGATGAAGCGCGGTTGTTTACATTTCAAGAGTCGGGTGATTTTAACTCTTTCAATAATGGAAAGTTTGTAATTGGCGAAAAAGAAATAGAAGATGACGACACTGAACCTTCTAGAGTCCAGCCAGTGCTTGGGAAGATAGTTTACCAGAGAAAAGTGAAGGACACTCTCAGTTCTTTTGGGATGAATATGATGATCAAGGGGAGTTATCCCAGTTCATATGTCAGTTTTATGAGTCTCGTTATCAAATTGGTTCGAGAATAGATGATGCATTACAACATGCTCGAAGATATTCATGCCATCTTCCCAGCATACCGTAGTTAGGTGGTTATCTCTGACCATGATAGTCCCAAGGGAAGCGCGAGTTTGTTAATGCTTATGCTGACTGCATGATGTTGCTTATCAAAGCATTTGCATGGTCTTGTGTTGTAAAGAAGAACTGCACTTGTATATGCAATGGAAAAGGATTGCAGAAGGAAGAAAACATGGAGAGAGAAATAGTAGAAATGA : GTACATTTCTTTGTTGTTCTACTTGTACACTGCTGGATGTTGACACAATTTCAAACATGCTATCACAATCTGGTGTGCTCAAGTGCTCTCCGTGCAACTTGCAATGTGTGAACAGGAATCCATGAGATGTTAGTGTCTGTTACACAAAAAACTACTAGTTGGGTTGACGTTGAACTCATCGATATATATATGAAAATAGAGTCACAACTCACAAATGTGAGGCTGACCGATCTATGAAGTGGGTGAAAGTCTTGGTGATCTCTTCTTATTTGTCCAACGAGAGTA</gDNA_template>
            <first_frame> E  N  I  R  *  I  R  K  E  A  A  L  T  P  P  V  F  V  K  P  S  R  L  *  H  G  G  G  E  L  *  S  S  L  A  L  P  N  L  *  S  R  F  F  *  I  Q  E  L  K  L  L  H  V  L  P  L  S  P  M  K  R  G  C  L  H  F  K  S  R  V  I  L  T  L  S  I  M  E  S  L  *  L  A  K  K  K  *  K  M  T  T  L  N  L  L  E  S  S  Q  C  L  G  R  *  F  T  R  E  K  *  R  T  L  S  V  L  L  G  *  I  *  *  S  R  G  V  I  P  V  H  M  S  V  L  *  V  S  L  S  N  W  F  E  N  R  *  C  I  T  T  C  S  K  I  F  M  P  S  S  Q  H  T  V  V  R  W  L  S  L  T  M  I  V  P  R  E  A  R  V  C  *  C  L  C  *  L  H  D  V  A  Y  Q  S  I  C  M  V  L  C  C  K  E  E  L  H  L  Y  M  Q  W  K  R  I  A  E  G  R  K  H  G  E  R  N  S  R  N  E :   Y  I  S  L  L  F  Y  L  Y  T  A  G  C  *  H  N  F  K  H  A  I  T  I  W  C  A  Q  V  L  S  V  Q  L  A  M  C  E  Q  E  S  M  R  C  *  C  L  L  H  K  K  L  L  V  G  L  T  L  N  S  S  I  Y  I  *  K  *  S  H  N  S  Q  M  *  G  *  P  I  Y  E  V  G  E  S  L  G  D  L  F  L  F  V  Q  R  E   </first_frame>
            <second_frame>  K  I  *  D  E  *  E  R  R  Q  H  *  L  L  Q  Y  L  L  N  L  P  D  C  S  M  E  G  E  N  Y  N  L  H  W  P  Y  P  I  C  S  Q  G  F  S  R  F  R  S  *  S  C  C  M  S  F  H  *  A  R  *  S  A  V  V  Y  I  S  R  V  G  *  F  *  L  F  Q  *  W  K  V  C  N  W  R  K  R  N  R  R  *  R  H  *  T  F  *  S  P  A  S  A  W  E  D  S  L  P  E  K  S  E  G  H  S  Q  F  F  W  D  E  Y  D  D  Q  G  E  L  S  Q  F  I  C  Q  F  Y  E  S  R  Y  Q  I  G  S  R  I  D  D  A  L  Q  H  A  R  R  Y  S  C  H  L  P  S  I  P  *  L  G  G  Y  L  *  P  *  *  S  Q  G  K  R  E  F  V  N  A  Y  A  D  C  M  M  L  L  I  K  A  F  A  W  S  C  V  V  K  K  N  C  T  C  I  C  N  G  K  G  L  Q  K  E  E  N  M  E  R  E  I  V  E  M   : S  T  F  L  C  C  S  T  C  T  L  L  D  V  D  T  I  S  N  M  L  S  Q  S  G  V  L  K  C  S  P  C  N  L  Q  C  V  N  R  N  P  *  D  V  S  V  C  Y  T  K  N  Y  *  L  G  *  R  *  T  H  R  Y  I  Y  E  N  R  V  T  T  H  K  C  E  A  D  R  S  M  K  W  V  K  V  L  V  I  S  S  Y  L  S  N  E  S  </second_frame>
            <third_frame>   K  Y  K  M  N  K  K  G  G  S  T  N  S  S  S  I  C  *  T  F  Q  I  V  A  W  R  G  R  I  I  I  F  T  G  P  T  Q  F  V  V  K  V  F  L  D  S  G  A  K  A  V  A  C  P  S  I  E  P  D  E  A  R  L  F  T  F  Q  E  S  G  D  F  N  S  F  N  N  G  K  F  V  I  G  E  K  E  I  E  D  D  D  T  E  P  S  R  V  Q  P  V  L  G  K  I  V  Y  Q  R  K  V  K  D  T  L  S  S  F  G  M  N  M  M  I  K  G  S  Y  P  S  S  Y  V  S  F  M  S  L  V  I  K  L  V  R  E  *  M  M  H  Y  N  M  L  E  D  I  H  A  I  F  P  A  Y  R  S  *  V  V  I  S  D  H  D  S  P  K  G  S  A  S  L  L  M  L  M  L  T  A  *  C  C  L  S  K  H  L  H  G  L  V  L  *  R  R  T  A  L  V  Y  A  M  E  K  D  C  R  R  K  K  T  W  R  E  K  *  *  K  *  :  V  H  F  F  V  V  L  L  V  H  C  W  M  L  T  Q  F  Q  T  C  Y  H  N  L  V  C  S  S  A  L  R  A  T  C  N  V  *  T  G  I  H  E  M  L  V  S  V  T  Q  K  T  T  S  W  V  D  V  E  L  I  D  I  Y  M  K  I  E  S  Q  L  T  N  V  R  L  T  D  L  *  S  G  *  K  S  W  *  S  L  L  I  C  P  T  R  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74002" stop="74382"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TFQIVAWRGRIIIFTGPTQFVVKVFLDSGAKAVACPSIEPDEARLFTFQESGDFNSFNNGKFVIGEKEIEDDDTEPSRVQPVLGKIVYQRKVKDTLSSFGMNMMIKGSYPSSYVSFMSLVIKLVRE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74466" stop="74628"/>
                    <exon start="74724" stop="74848"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQGKREFVNAYADCMMLLIKAFAWSCVVKKNCTCICNGKGLQKEENMEREIVEMSTFLCCSTCTLLDVDTISNMLSQSGVLKCSPCNLQCVNRNP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="77709" PGL_stop="77892"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77709" e_stop="77892"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="77709" e_stop="77892" e_length="184"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77709" stop="77892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E612686" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATATGTGGACCATTGGTTCACACGATATTAACTCAATTTTTTAAGGGGGAGAGTTCATCAAGGTAGCTTGCTACCTGGACTCTCAAGCGTCGCCCATGCGTTGCACTATAGCAAGGGCCTGGCGCACCCCACCAATCCA</gDNA_template>
            <first_frame> G  *  D  Q  V  *  Y  L  F  L  S  V  *  Y  L  I  C  G  P  L  V  H  T  I  L  T  Q  F  F  K  G  E  S  S  S  R  *  L  A  T  W  T  L  K  R  R  P  C  V  A  L  *  Q  G  P  G  A  P  H  Q  S  </first_frame>
            <second_frame>  A  K  I  K  C  S  I  C  S  Y  Q  F  N  I  *  Y  V  D  H  W  F  T  R  Y  *  L  N  F  L  R  G  R  V  H  Q  G  S  L  L  P  G  L  S  S  V  A  H  A  L  H  Y  S  K  G  L  A  H  P  T  N  P </second_frame>
            <third_frame>   L  R  S  S  V  V  S  V  L  I  S  L  I  S  D  M  W  T  I  G  S  H  D  I  N  S  I  F  *  G  G  E  F  I  K  V  A  C  Y  L  D  S  Q  A  S  P  M  R  C  T  I  A  R  A  W  R  T  P  P  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0204D01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="79048" PGL_stop="87640"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79048" e_stop="79275"/>
            <exon e_start="79956" e_stop="80046"/>
            <exon e_start="80133" e_stop="80185"/>
            <exon e_start="81053" e_stop="81145"/>
            <exon e_start="81221" e_stop="81292"/>
            <exon e_start="82164" e_stop="82236"/>
            <exon e_start="82345" e_stop="82390"/>
            <exon e_start="82517" e_stop="82580"/>
            <exon e_start="84921" e_stop="84974"/>
            <exon e_start="85404" e_stop="85481"/>
            <exon e_start="85559" e_stop="86022"/>
            <exon e_start="87617" e_stop="87640"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.894" e_score="0.987"/>
          <exon-intron don_prob="0.000" acc_prob="0.847" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.706" e_score="1.000"/>
          <exon-intron don_prob="0.940" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.919" e_score="0.986"/>
          <exon-intron don_prob="0.998" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.993" e_score="0.984"/>
          <exon-intron don_prob="0.912" acc_prob="0.968" e_score="0.981"/>
          <exon-intron don_prob="0.993" acc_prob="0.931" e_score="0.987"/>
          <exon-intron don_prob="0.000" acc_prob="0.430" e_score="0.998"/>
          <exon-only e_score="0.625"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="79048" e_stop="79275" e_length="228"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.894">
            <gDNA_intron_boundary i_start="79276" i_stop="79955" i_length="680"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="79956" e_stop="80046" e_length="91"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.847">
            <gDNA_intron_boundary i_start="80047" i_stop="80132" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80133" e_stop="80185" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.706">
            <gDNA_intron_boundary i_start="80186" i_stop="81052" i_length="867"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="81053" e_stop="81145" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.940" acc_prob="0.971">
            <gDNA_intron_boundary i_start="81146" i_stop="81220" i_length="75"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="81221" e_stop="81292" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.942" acc_prob="0.919">
            <gDNA_intron_boundary i_start="81293" i_stop="82163" i_length="871"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="82164" e_stop="82236" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.964">
            <gDNA_intron_boundary i_start="82237" i_stop="82344" i_length="108"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="82345" e_stop="82390" e_length="46"/>
          </exon>
          <intron i_serial="7" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82391" i_stop="82516" i_length="126"/>
          </intron>
          <exon e_serial="8" e_score="0.984">
            <gDNA_exon_boundary e_start="82517" e_stop="82580" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="82581" i_stop="84920" i_length="2340"/>
          </intron>
          <exon e_serial="9" e_score="0.981">
            <gDNA_exon_boundary e_start="84921" e_stop="84974" e_length="54"/>
          </exon>
          <intron i_serial="9" don_prob="0.912" acc_prob="0.968">
            <gDNA_intron_boundary i_start="84975" i_stop="85403" i_length="429"/>
          </intron>
          <exon e_serial="10" e_score="0.987">
            <gDNA_exon_boundary e_start="85404" e_stop="85481" e_length="78"/>
          </exon>
          <intron i_serial="10" don_prob="0.993" acc_prob="0.931">
            <gDNA_intron_boundary i_start="85482" i_stop="85558" i_length="77"/>
          </intron>
          <exon e_serial="11" e_score="0.998">
            <gDNA_exon_boundary e_start="85559" e_stop="86022" e_length="464"/>
          </exon>
          <intron i_serial="11" don_prob="0.000" acc_prob="0.430">
            <gDNA_intron_boundary i_start="86023" i_stop="87616" i_length="1594"/>
          </intron>
          <exon e_serial="12" e_score="0.625">
            <gDNA_exon_boundary e_start="87617" e_stop="87640" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79048" stop="79275"/>
              <exon start="79956" stop="80046"/>
              <exon start="80133" stop="80162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79120" stop="79275"/>
              <exon start="79956" stop="80046"/>
              <exon start="80133" stop="80185"/>
              <exon start="81053" stop="81145"/>
              <exon start="81221" stop="81292"/>
              <exon start="82164" stop="82236"/>
              <exon start="82345" stop="82390"/>
              <exon start="82517" stop="82580"/>
              <exon start="84921" stop="84969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79122" stop="79275"/>
              <exon start="79956" stop="80046"/>
              <exon start="80133" stop="80185"/>
              <exon start="81053" stop="81145"/>
              <exon start="81221" stop="81292"/>
              <exon start="82164" stop="82215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267222" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79128" stop="79275"/>
              <exon start="79956" stop="80046"/>
              <exon start="80133" stop="80185"/>
              <exon start="81053" stop="81145"/>
              <exon start="81221" stop="81292"/>
              <exon start="82164" stop="82215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267292" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79149" stop="79275"/>
              <exon start="79956" stop="80046"/>
              <exon start="80133" stop="80185"/>
              <exon start="81053" stop="81145"/>
              <exon start="81221" stop="81292"/>
              <exon start="82164" stop="82236"/>
              <exon start="82345" stop="82382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82230" stop="82236"/>
              <exon start="82345" stop="82390"/>
              <exon start="82517" stop="82580"/>
              <exon start="84921" stop="84974"/>
              <exon start="85404" stop="85481"/>
              <exon start="85559" stop="86022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E594057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84921" stop="84974"/>
              <exon start="85404" stop="85481"/>
              <exon start="85559" stop="86022"/>
              <exon start="87617" stop="87635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429869" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85445" stop="85481"/>
              <exon start="85559" stop="86022"/>
              <exon start="87617" stop="87640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85456" stop="85481"/>
              <exon start="85559" stop="86021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353265" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACTTTGTTCTTTCTTTTATAGCATCAGTTTTTTGACTTCTTTCAATACAACAAGATAAGCGGAGGGGAGAGCTGAAATGGCTAGGTTGCCACTTGGGTCGTCGCCGATTGACATCGCCGGTCCGGTGACCAACTGGTGGGACCACGTCAACGAATCCGTTCAGTGGCAAGATGGGATTTTCTACTCCCTTTGTGCTTCCTATGGTCTTGTTTCAGCAGTTGCCCTA : ATTCAATTAATACGAATTGATTTGAGGGTACCCGAGTATGGCTGGACAACACAAAAGGTGTTCCATCTGATGAACTTTGTTGTAAATGGAG : TTCGTGCAATTGTCTTTGGATTTCACAAACATGTTTTTCTGCTCCATTATAAG : GTGCTGACTCTGGCAATATTGGACCTACCAGGGCTCCTTTTCTTTTCAACATTCACACTCCTTGTTCTATTTTGGGCTGAGATATATCACCAG : GCTAGGAGTTTACCAACAGATAAGCTCAGGATTTCTTATATTGCCATTAATGATGCCATATACTTCATTCAG : GCCTGTATCTGGGTTTACCTCTGGATCAATGACAATAGCACAGTGGAATTCATTGGGAAGATATTTATGGCAG : TTGTATCAGTTATTGCAGCCTTGGGCTTTCTGCTATATGGTGGAAG : GTTATTTCTCATGCTGCGGCGCTTCCCTATTGAATCTAAAGGGAGGAGAAAGAAGCTTCATGAG : GTTGGATCGGTGACTGCCATATGTTTCACCTGTTTCCTCATTAGATGCTTTGTG : GTTGTGTTATCTGCTTTTGATTCTGACGCATCTCTTGACGTCTTGGATCATCCTGTTTTGAATCTGATATACTACCTG : CTGGTAGAAATTCTTCCTTCAGCTCTTGTGCTGTACATCCTGCGAAAACTGCCTCCAAAAAGAGTGTCTGCACAATACCACCCAATCAGTTAGCTGCAGCAGAATTTTATCGTTAGTGATACACGTTCCCATGGTTTCTGTTGCAGAAGCTAACTGGAGTTGTTCAGGAAAAGTGAAACTGCAAAAGGATATTCGGTTGCAATAATTCTGCGGAAAGGCAAAGATTCAACGCTTTTTTGGCAGTTGTTAAAACAGAGGTTAAGCTGTTTTGCTTACATTATATTGTTTCTGTGGTTTTAGTGTGAAGCATGAGACAAATAAGTGTTCCCCACGTCTGTGAAAAATCCTAGTCATGATGTAATGACGCAGAGGGTAAATCTCAGTATCGCCATTGTACTGGCATGTTGTAACTATGATGTTCTGGATCTCCTTTACTGCAATGACTGATGTCCTTTGTTTGGTCA : GAAAACATTGTACAAGAAAAAAAT</gDNA_template>
            <first_frame> L  L  C  S  F  F  Y  S  I  S  F  L  T  S  F  N  T  T  R  *  A  E  G  R  A  E  M  A  R  L  P  L  G  S  S  P  I  D  I  A  G  P  V  T  N  W  W  D  H  V  N  E  S  V  Q  W  Q  D  G  I  F  Y  S  L  C  A  S  Y  G  L  V  S  A  V  A  L  :  I  Q  L  I  R  I  D  L  R  V  P  E  Y  G  W  T  T  Q  K  V  F  H  L  M  N  F  V  V  N  G   : V  R  A  I  V  F  G  F  H  K  H  V  F  L  L  H  Y  K  :  V  L  T  L  A  I  L  D  L  P  G  L  L  F  F  S  T  F  T  L  L  V  L  F  W  A  E  I  Y  H  Q  :  A  R  S  L  P  T  D  K  L  R  I  S  Y  I  A  I  N  D  A  I  Y  F  I  Q  :  A  C  I  W  V  Y  L  W  I  N  D  N  S  T  V  E  F  I  G  K  I  F  M  A   : V  V  S  V  I  A  A  L  G  F  L  L  Y  G  G  R :   L  F  L  M  L  R  R  F  P  I  E  S  K  G  R  R  K  K  L  H  E  :  V  G  S  V  T  A  I  C  F  T  C  F  L  I  R  C  F  V  :  V  V  L  S  A  F  D  S  D  A  S  L  D  V  L  D  H  P  V  L  N  L  I  Y  Y  L  :  L  V  E  I  L  P  S  A  L  V  L  Y  I  L  R  K  L  P  P  K  R  V  S  A  Q  Y  H  P  I  S  *  L  Q  Q  N  F  I  V  S  D  T  R  S  H  G  F  C  C  R  S  *  L  E  L  F  R  K  S  E  T  A  K  G  Y  S  V  A  I  I  L  R  K  G  K  D  S  T  L  F  W  Q  L  L  K  Q  R  L  S  C  F  A  Y  I  I  L  F  L  W  F  *  C  E  A  *  D  K  *  V  F  P  T  S  V  K  N  P  S  H  D  V  M  T  Q  R  V  N  L  S  I  A  I  V  L  A  C  C  N  Y  D  V  L  D  L  L  Y  C  N  D  *  C  P  L  F  G  Q :   K  T  L  Y  K  K  K   </first_frame>
            <second_frame>  Y  F  V  L  S  F  I  A  S  V  F  *  L  L  S  I  Q  Q  D  K  R  R  G  E  L  K  W  L  G  C  H  L  G  R  R  R  L  T  S  P  V  R  *  P  T  G  G  T  T  S  T  N  P  F  S  G  K  M  G  F  S  T  P  F  V  L  P  M  V  L  F  Q  Q  L  P  * :   F  N  *  Y  E  L  I  *  G  Y  P  S  M  A  G  Q  H  K  R  C  S  I  *  *  T  L  L  *  M  E  :  F  V  Q  L  S  L  D  F  T  N  M  F  F  C  S  I  I  R :   C  *  L  W  Q  Y  W  T  Y  Q  G  S  F  S  F  Q  H  S  H  S  L  F  Y  F  G  L  R  Y  I  T  R :   L  G  V  Y  Q  Q  I  S  S  G  F  L  I  L  P  L  M  M  P  Y  T  S  F  R :   P  V  S  G  F  T  S  G  S  M  T  I  A  Q  W  N  S  L  G  R  Y  L  W  Q  :  L  Y  Q  L  L  Q  P  W  A  F  C  Y  M  V  E   : G  Y  F  S  C  C  G  A  S  L  L  N  L  K  G  G  E  R  S  F  M  R :   L  D  R  *  L  P  Y  V  S  P  V  S  S  L  D  A  L  W :   L  C  Y  L  L  L  I  L  T  H  L  L  T  S  W  I  I  L  F  *  I  *  Y  T  T  C :   W  *  K  F  F  L  Q  L  L  C  C  T  S  C  E  N  C  L  Q  K  E  C  L  H  N  T  T  Q  S  V  S  C  S  R  I  L  S  L  V  I  H  V  P  M  V  S  V  A  E  A  N  W  S  C  S  G  K  V  K  L  Q  K  D  I  R  L  Q  *  F  C  G  K  A  K  I  Q  R  F  F  G  S  C  *  N  R  G  *  A  V  L  L  T  L  Y  C  F  C  G  F  S  V  K  H  E  T  N  K  C  S  P  R  L  *  K  I  L  V  M  M  *  *  R  R  G  *  I  S  V  S  P  L  Y  W  H  V  V  T  M  M  F  W  I  S  F  T  A  M  T  D  V  L  C  L  V   : R  K  H  C  T  R  K  K  </second_frame>
            <third_frame>   T  L  F  F  L  L  *  H  Q  F  F  D  F  F  Q  Y  N  K  I  S  G  G  E  S  *  N  G  *  V  A  T  W  V  V  A  D  *  H  R  R  S  G  D  Q  L  V  G  P  R  Q  R  I  R  S  V  A  R  W  D  F  L  L  P  L  C  F  L  W  S  C  F  S  S  C  P   : N  S  I  N  T  N  *  F  E  G  T  R  V  W  L  D  N  T  K  G  V  P  S  D  E  L  C  C  K  W  S :   S  C  N  C  L  W  I  S  Q  T  C  F  S  A  P  L  *   : G  A  D  S  G  N  I  G  P  T  R  A  P  F  L  F  N  I  H  T  P  C  S  I  L  G  *  D  I  S  P   : G  *  E  F  T  N  R  *  A  Q  D  F  L  Y  C  H  *  *  C  H  I  L  H  S   : G  L  Y  L  G  L  P  L  D  Q  *  Q  *  H  S  G  I  H  W  E  D  I  Y  G  S :   C  I  S  Y  C  S  L  G  L  S  A  I  W  W  K  :  V  I  S  H  A  A  A  L  P  Y  *  I  *  R  E  E  K  E  A  S  *   : G  W  I  G  D  C  H  M  F  H  L  F  P  H  *  M  L  C   : G  C  V  I  C  F  *  F  *  R  I  S  *  R  L  G  S  S  C  F  E  S  D  I  L  P   : A  G  R  N  S  S  F  S  S  C  A  V  H  P  A  K  T  A  S  K  K  S  V  C  T  I  P  P  N  Q  L  A  A  A  E  F  Y  R  *  *  Y  T  F  P  W  F  L  L  Q  K  L  T  G  V  V  Q  E  K  *  N  C  K  R  I  F  G  C  N  N  S  A  E  R  Q  R  F  N  A  F  L  A  V  V  K  T  E  V  K  L  F  C  L  H  Y  I  V  S  V  V  L  V  *  S  M  R  Q  I  S  V  P  H  V  C  E  K  S  *  S  *  C  N  D  A  E  G  K  S  Q  Y  R  H  C  T  G  M  L  *  L  *  C  S  G  S  P  L  L  Q  *  L  M  S  F  V  W  S  :  E  N  I  V  Q  E  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79108" stop="79275"/>
                    <exon start="79956" stop="80046"/>
                    <exon start="80133" stop="80185"/>
                    <exon start="81053" stop="81145"/>
                    <exon start="81221" stop="81292"/>
                    <exon start="82164" stop="82236"/>
                    <exon start="82345" stop="82390"/>
                    <exon start="82517" stop="82580"/>
                    <exon start="84921" stop="84974"/>
                    <exon start="85404" stop="85481"/>
                    <exon start="85559" stop="85651"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>882</number_coding_nucleotides>
                  <number_encoded_amino_acids>294</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEGRAEMARLPLGSSPIDIAGPVTNWWDHVNESVQWQDGIFYSLCASYGLVSAVALIQLIRIDLRVPEYGWTTQKVFHLMNFVVNGVRAIVFGFHKHVFLLHYKVLTLAILDLPGLLFFSTFTLLVLFWAEIYHQARSLPTDKLRISYIAINDAIYFIQACIWVYLWINDNSTVEFIGKIFMAVVSVIAALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVVLSAFDSDASLDVLDHPVLNLIYYLLVEILPSALVLYILRKLPPKRVSAQYHPIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="94029" PGL_stop="85566"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94029" e_stop="93737"/>
            <exon e_start="92623" e_stop="92524"/>
            <exon e_start="91834" e_stop="91620"/>
            <exon e_start="91524" e_stop="91441"/>
            <exon e_start="88279" e_stop="88226"/>
            <exon e_start="87224" e_stop="86836"/>
            <exon e_start="86043" e_stop="85566"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.853" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.986"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94029" e_stop="93737" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92623" e_stop="92524" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.853">
            <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91834" e_stop="91620" e_length="215"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.985">
            <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="91524" e_stop="91441" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88279" e_stop="88226" e_length="54"/>
          </exon>
          <intron i_serial="5" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001"/>
          </intron>
          <exon e_serial="6" e_score="0.986">
            <gDNA_exon_boundary e_start="87224" e_stop="86836" e_length="389"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86835" i_stop="86044" i_length="792"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="86043" e_stop="85566" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94029" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94021" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94015" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94012" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94011" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94010" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93995" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93992" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93962" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93953" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405834" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93951" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93799" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92569" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379217" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91766" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549612" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91513" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86836"/>
              <exon start="86043" stop="86011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395908" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87176" stop="86930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610627" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86014" stop="85566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCCTCTAGCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG : ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG : ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG : GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG : GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG : GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAA : AGTAAAATTACTAGAACAAACTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACGTGTATCACTAACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTCTTTTTGGAGGCAGTTTTCGCAGGATGTACAGCACAAGAGCTGAAGGAAGAATTT</gDNA_template>
            <first_frame> I  S  S  S  *  I  K  S  D  H  I  Y  I  H  T  Y  I  L  Y  T  R  E  C  V  Y  I  Y  I  Y  *  K  S  S  N  *  S  I  F  R  *  P  R  G  F  I  S  R  V  V  R  D  F  W  E  V  L  F  W  G  K  F  D  *  A  E  W  H  K  L  W  K  N  G  T  S  R  C  R  L  S  P  V  P  T  S  L  P  Q  S  S  P  Q  S  V  V  L  W  R :   L  Y  L  L  I  T  C  T  *  T  P  S  *  W  *  S  N  T  R  C  G  A  W  L  Q  I  F  S  T  F  G  R  W  :  T  W  T  F  C  F  T  C  F  S  *  L  G  T  A  S  F  *  K  R  T  P  S  G  E  G  R  Q  I  S  S  T  C  S  C  L  V  P  L  F  *  Q  E  L  F  L  S  G  G  *  Y  L  M  S  Q  S  H  L  Q  G  S  Y  S  *  A  I  H  *  L  L  *  W :   F  M  Y  G  A  S  K  I  H  L  S  T  *  A  F  W  V  C  L  L  S  P  Q  L  T  S  H  G :   F  F  W  A  S  L  C  *  L  A  P  V  L  G  W  I  Y  W :   E  *  L  Q  A  M  L  I  I  S  *  K  T  S  I  R  E  *  L  V  V  D  P  *  K  L  Q  Q  L  S  K  H  C  L  L  M  S  R  *  W  W  L  A  L  L  M  F  A  S  L  L  L  L  L  M  K  F  H  Q  I  N  E  R  I  L  *  V  N  Q  W  L  C  L  Q  F  L  *  I  D  R  R  Y  L  V  G  G  N  Q  G  W  C  C  *  *  *  L  C  *  L  L  M  L  F  V  I  *  I  W  N  W  R  S  A  V  W  *  R  K  F  A  Y  M  K  C  F  F  S  V  K   : K  *  N  Y  *  N  K  L  T  K  Q  R  T  S  V  I  A  V  K  E  I  Q  N  I  I  V  T  T  C  Q  Y  N  G  D  T  E  I  Y  P  L  R  H  Y  I  M  T  R  I  F  H  R  R  G  E  H  L  F  V  S  C  F  T  L  K  P  Q  K  Q  Y  N  V  S  K  T  A  *  P  L  F  *  Q  L  P  K  K  R  *  I  F  A  F  P  Q  N  Y  C  N  R  I  S  F  C  S  F  T  F  P  E  Q  L  Q  L  A  S  A  T  E  T  M  G  T  C  I  T  N  D  K  I  L  L  Q  L  T  D  W  V  V  L  C  R  H  S  F  W  R  Q  F  S  Q  D  V  Q  H  K  S  *  R  K  N   </first_frame>
            <second_frame>  F  P  L  A  K  *  N  P  I  T  Y  I  Y  I  H  T  Y  Y  I  H  V  S  V  Y  I  Y  I  Y  I  R  N  P  R  I  D  Q  F  S  D  N  L  E  A  L  S  V  G  L  L  G  I  S  G  K  F  C  F  G  E  S  L  I  K  R  N  G  T  S  C  G  R  M  V  Q  A  D  A  D  Y  H  P  F  L  P  H  C  R  N  P  H  H  N  R  L  F  S  G   : D  Y  I  S  L  *  L  V  P  E  P  Q  V  S  G  E  A  I  P  G  V  A  P  G  Y  K  F  S  L  L  S  E  D  G :   L  G  L  S  V  S  H  V  F  P  S  S  V  L  Q  A  S  R  R  E  L  L  Q  G  K  D  G  R  F  L  L  H  A  L  V  W  C  H  C  F  N  R  N  C  S  C  R  G  D  D  T  L  C  L  R  V  I  C  K  D  H  I  P  E  Q  F  I  D  F  Y  D   : G  L  C  M  E  Q  A  K  S  I  Y  P  H  E  L  F  G  S  V  Y  F  H  R  S  L  P  P  M   : G  S  F  G  L  L  C  A  S  W  R  Q  C  L  G  G  S  T   : G  N  D  C  R  P  C  L  L  F  P  R  R  R  L  S  A  N  D  W  S  *  T  P  E  N  S  S  S  Y  Q  S  I  V  C  *  *  A  G  S  G  G  S  P  C  *  C  S  L  R  C  S  S  C  *  *  S  S  T  K  S  M  R  E  F  Y  K  *  T  S  G  S  V  F  S  F  C  K  L  T  V  D  I  W  L  E  E  I  R  V  G  V  V  D  D  D  C  A  S  Y  *  C  F  L  *  F  R  S  G  T  G  E  V  L  S  G  R  E  N  S  P  I  *  S  V  F  S  L  L  K  :  S  K  I  T  R  T  N  *  P  N  K  G  H  Q  S  L  Q  *  R  R  S  R  T  S  *  L  Q  H  A  S  T  M  A  I  L  R  F  T  L  C  V  I  T  S  *  L  G  F  F  T  D  V  G  N  T  Y  L  S  H  A  S  H  *  N  H  R  N  N  I  M  *  A  K  Q  L  N  L  C  F  N  N  C  Q  K  S  V  E  S  L  P  F  R  R  I  I  A  T  E  Y  P  F  A  V  S  L  F  L  N  N  S  S  *  L  L  Q  Q  K  P  W  E  R  V  S  L  T  I  K  F  C  C  S  *  L  I  G  W  Y  C  A  D  T  L  F  G  G  S  F  R  R  M  Y  S  T  R  A  E  G  R  I  </second_frame>
            <third_frame>   F  L  *  L  N  K  I  R  S  H  I  Y  T  Y  I  H  I  I  Y  T  *  V  C  I  Y  I  Y  I  L  E  I  L  E  L  I  N  F  Q  I  T  *  R  L  Y  Q  S  G  C  *  G  F  L  G  S  F  V  L  G  K  V  *  L  S  G  M  A  Q  A  V  E  E  W  Y  K  Q  M  P  I  I  T  R  S  Y  L  T  A  A  I  L  T  T  I  G  C  S  L  E  :  I  I  S  P  Y  N  L  Y  L  N  P  K  L  V  V  K  Q  Y  Q  V  W  R  L  V  T  N  F  L  Y  F  R  K  M   : D  L  D  F  L  F  H  M  F  F  L  A  R  Y  C  K  L  L  E  E  N  S  F  R  G  R  T  A  D  F  F  Y  M  L  L  F  G  A  T  V  L  T  G  I  V  L  V  G  G  M  I  P  Y  V  S  E  S  F  A  R  I  I  F  L  S  N  S  L  T  F  M  M  :  V  Y  V  W  S  K  Q  N  P  F  I  H  M  S  F  L  G  L  F  T  F  T  A  A  Y  L  P  W  :  V  L  L  G  F  S  V  L  V  G  A  S  A  W  V  D  L  L  :  G  M  I  A  G  H  A  Y  Y  F  L  E  D  V  Y  P  R  M  T  G  R  R  P  L  K  T  P  A  V  I  K  A  L  F  A  D  E  P  V  V  V  A  R  P  A  N  V  R  F  A  A  P  P  V  D  E  V  P  P  N  Q  *  E  N  F  I  S  K  P  V  A  L  S  S  V  S  V  N  *  P  *  I  F  G  W  R  K  S  G  L  V  L  L  M  M  I  V  L  V  I  N  A  F  C  N  L  D  L  E  L  E  K  C  C  L  V  E  K  I  R  L  Y  E  V  F  F  L  C  *  K :   V  K  L  L  E  Q  T  D  Q  T  K  D  I  S  H  C  S  K  G  D  P  E  H  H  S  Y  N  M  P  V  Q  W  R  Y  *  D  L  P  S  A  S  L  H  H  D  *  D  F  S  Q  T  W  G  T  L  I  C  L  M  L  H  T  K  T  T  E  T  I  *  C  K  Q  N  S  L  T  S  V  L  T  T  A  K  K  A  L  N  L  C  L  S  A  E  L  L  Q  P  N  I  L  L  Q  F  H  F  S  *  T  T  P  V  S  F  C  N  R  N  H  G  N  V  Y  H  *  R  *  N  S  A  A  A  N  *  L  G  G  I  V  Q  T  L  F  L  E  A  V  F  A  G  C  T  A  Q  E  L  K  E  E  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93844" stop="93737"/>
                    <exon start="92623" stop="92524"/>
                    <exon start="91834" stop="91620"/>
                    <exon start="91524" stop="91441"/>
                    <exon start="88279" stop="88226"/>
                    <exon start="87224" stop="87039"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSGMAQAVEEWYKQMPIITRSYLTAAILTTIGCSLEIISPYNLYLNPKLVVKQYQVWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLVGGMIPYVSESFARIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPAVIKALFADEPVVVARPANVRFAAPPVDEVPPNQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86029" stop="85817"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKLTKQRTSVIAVKEIQNIIVTTCQYNGDTEIYPLRHYIMTRIFHRRGEHLFVSCFTLKPQKQYNVSKTA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85783" stop="85577"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFAFPQNYCNRISFCSFTFPEQLQLASATETMGTCITNDKILLQLTDWVVLCRHSFWRQFSQDVQHKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="94029" e_stop="93737"/>
            <exon e_start="92623" e_stop="92524"/>
            <exon e_start="91834" e_stop="91620"/>
            <exon e_start="91524" e_stop="91441"/>
            <exon e_start="88279" e_stop="88226"/>
            <exon e_start="87224" e_stop="86836"/>
            <exon e_start="86334" e_stop="86287"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.853" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.542"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94029" e_stop="93737" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92623" e_stop="92524" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.853">
            <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91834" e_stop="91620" e_length="215"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.985">
            <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="91524" e_stop="91441" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88279" e_stop="88226" e_length="54"/>
          </exon>
          <intron i_serial="5" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87224" e_stop="86836" e_length="389"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86835" i_stop="86335" i_length="501"/>
          </intron>
          <exon e_serial="7" e_score="0.542">
            <gDNA_exon_boundary e_start="86334" e_stop="86287" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94029" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94021" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94015" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94012" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94011" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94010" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93995" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93992" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93962" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93953" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405834" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93951" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93799" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92569" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379217" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91766" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549612" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87224" stop="86836"/>
              <exon start="86334" stop="86287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87176" stop="86930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCCTCTAGCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG : ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG : ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG : GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG : GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG : GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAA : ATATACATAAAAATAAAGCTGTTAAAGAACAATGCATGCAGCAAAAAT</gDNA_template>
            <first_frame> I  S  S  S  *  I  K  S  D  H  I  Y  I  H  T  Y  I  L  Y  T  R  E  C  V  Y  I  Y  I  Y  *  K  S  S  N  *  S  I  F  R  *  P  R  G  F  I  S  R  V  V  R  D  F  W  E  V  L  F  W  G  K  F  D  *  A  E  W  H  K  L  W  K  N  G  T  S  R  C  R  L  S  P  V  P  T  S  L  P  Q  S  S  P  Q  S  V  V  L  W  R :   L  Y  L  L  I  T  C  T  *  T  P  S  *  W  *  S  N  T  R  C  G  A  W  L  Q  I  F  S  T  F  G  R  W  :  T  W  T  F  C  F  T  C  F  S  *  L  G  T  A  S  F  *  K  R  T  P  S  G  E  G  R  Q  I  S  S  T  C  S  C  L  V  P  L  F  *  Q  E  L  F  L  S  G  G  *  Y  L  M  S  Q  S  H  L  Q  G  S  Y  S  *  A  I  H  *  L  L  *  W :   F  M  Y  G  A  S  K  I  H  L  S  T  *  A  F  W  V  C  L  L  S  P  Q  L  T  S  H  G :   F  F  W  A  S  L  C  *  L  A  P  V  L  G  W  I  Y  W :   E  *  L  Q  A  M  L  I  I  S  *  K  T  S  I  R  E  *  L  V  V  D  P  *  K  L  Q  Q  L  S  K  H  C  L  L  M  S  R  *  W  W  L  A  L  L  M  F  A  S  L  L  L  L  L  M  K  F  H  Q  I  N  E  R  I  L  *  V  N  Q  W  L  C  L  Q  F  L  *  I  D  R  R  Y  L  V  G  G  N  Q  G  W  C  C  *  *  *  L  C  *  L  L  M  L  F  V  I  *  I  W  N  W  R  S  A  V  W  *  R  K  F  A  Y  M  K  C  F  F  S  V  K   : N  I  H  K  N  K  A  V  K  E  Q  C  M  Q  Q  K  </first_frame>
            <second_frame>  F  P  L  A  K  *  N  P  I  T  Y  I  Y  I  H  T  Y  Y  I  H  V  S  V  Y  I  Y  I  Y  I  R  N  P  R  I  D  Q  F  S  D  N  L  E  A  L  S  V  G  L  L  G  I  S  G  K  F  C  F  G  E  S  L  I  K  R  N  G  T  S  C  G  R  M  V  Q  A  D  A  D  Y  H  P  F  L  P  H  C  R  N  P  H  H  N  R  L  F  S  G   : D  Y  I  S  L  *  L  V  P  E  P  Q  V  S  G  E  A  I  P  G  V  A  P  G  Y  K  F  S  L  L  S  E  D  G :   L  G  L  S  V  S  H  V  F  P  S  S  V  L  Q  A  S  R  R  E  L  L  Q  G  K  D  G  R  F  L  L  H  A  L  V  W  C  H  C  F  N  R  N  C  S  C  R  G  D  D  T  L  C  L  R  V  I  C  K  D  H  I  P  E  Q  F  I  D  F  Y  D   : G  L  C  M  E  Q  A  K  S  I  Y  P  H  E  L  F  G  S  V  Y  F  H  R  S  L  P  P  M   : G  S  F  G  L  L  C  A  S  W  R  Q  C  L  G  G  S  T   : G  N  D  C  R  P  C  L  L  F  P  R  R  R  L  S  A  N  D  W  S  *  T  P  E  N  S  S  S  Y  Q  S  I  V  C  *  *  A  G  S  G  G  S  P  C  *  C  S  L  R  C  S  S  C  *  *  S  S  T  K  S  M  R  E  F  Y  K  *  T  S  G  S  V  F  S  F  C  K  L  T  V  D  I  W  L  E  E  I  R  V  G  V  V  D  D  D  C  A  S  Y  *  C  F  L  *  F  R  S  G  T  G  E  V  L  S  G  R  E  N  S  P  I  *  S  V  F  S  L  L  K  :  I  Y  I  K  I  K  L  L  K  N  N  A  C  S  K  N </second_frame>
            <third_frame>   F  L  *  L  N  K  I  R  S  H  I  Y  T  Y  I  H  I  I  Y  T  *  V  C  I  Y  I  Y  I  L  E  I  L  E  L  I  N  F  Q  I  T  *  R  L  Y  Q  S  G  C  *  G  F  L  G  S  F  V  L  G  K  V  *  L  S  G  M  A  Q  A  V  E  E  W  Y  K  Q  M  P  I  I  T  R  S  Y  L  T  A  A  I  L  T  T  I  G  C  S  L  E  :  I  I  S  P  Y  N  L  Y  L  N  P  K  L  V  V  K  Q  Y  Q  V  W  R  L  V  T  N  F  L  Y  F  R  K  M   : D  L  D  F  L  F  H  M  F  F  L  A  R  Y  C  K  L  L  E  E  N  S  F  R  G  R  T  A  D  F  F  Y  M  L  L  F  G  A  T  V  L  T  G  I  V  L  V  G  G  M  I  P  Y  V  S  E  S  F  A  R  I  I  F  L  S  N  S  L  T  F  M  M  :  V  Y  V  W  S  K  Q  N  P  F  I  H  M  S  F  L  G  L  F  T  F  T  A  A  Y  L  P  W  :  V  L  L  G  F  S  V  L  V  G  A  S  A  W  V  D  L  L  :  G  M  I  A  G  H  A  Y  Y  F  L  E  D  V  Y  P  R  M  T  G  R  R  P  L  K  T  P  A  V  I  K  A  L  F  A  D  E  P  V  V  V  A  R  P  A  N  V  R  F  A  A  P  P  V  D  E  V  P  P  N  Q  *  E  N  F  I  S  K  P  V  A  L  S  S  V  S  V  N  *  P  *  I  F  G  W  R  K  S  G  L  V  L  L  M  M  I  V  L  V  I  N  A  F  C  N  L  D  L  E  L  E  K  C  C  L  V  E  K  I  R  L  Y  E  V  F  F  L  C  *  K :   Y  T  *  K  *  S  C  *  R  T  M  H  A  A  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93844" stop="93737"/>
                    <exon start="92623" stop="92524"/>
                    <exon start="91834" stop="91620"/>
                    <exon start="91524" stop="91441"/>
                    <exon start="88279" stop="88226"/>
                    <exon start="87224" stop="87039"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSGMAQAVEEWYKQMPIITRSYLTAAILTTIGCSLEIISPYNLYLNPKLVVKQYQVWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLVGGMIPYVSESFARIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPAVIKALFADEPVVVARPANVRFAAPPVDEVPPNQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="94029" e_stop="93737"/>
            <exon e_start="92623" e_stop="92524"/>
            <exon e_start="91834" e_stop="91620"/>
            <exon e_start="91524" e_stop="91441"/>
            <exon e_start="88279" e_stop="88226"/>
            <exon e_start="87224" e_stop="86836"/>
            <exon e_start="86553" e_stop="86510"/>
            <exon e_start="86429" e_stop="86410"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.853" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.101" e_score="0.995"/>
          <exon-intron don_prob="0.492" acc_prob="0.941" e_score="0.455"/>
          <exon-only e_score="0.400"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94029" e_stop="93737" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92623" e_stop="92524" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.853">
            <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91834" e_stop="91620" e_length="215"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.985">
            <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="91524" e_stop="91441" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88279" e_stop="88226" e_length="54"/>
          </exon>
          <intron i_serial="5" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="87224" e_stop="86836" e_length="389"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.101">
            <gDNA_intron_boundary i_start="86835" i_stop="86554" i_length="282"/>
          </intron>
          <exon e_serial="7" e_score="0.455">
            <gDNA_exon_boundary e_start="86553" e_stop="86510" e_length="44"/>
          </exon>
          <intron i_serial="7" don_prob="0.492" acc_prob="0.941">
            <gDNA_intron_boundary i_start="86509" i_stop="86430" i_length="80"/>
          </intron>
          <exon e_serial="8" e_score="0.400">
            <gDNA_exon_boundary e_start="86429" e_stop="86410" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94029" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94021" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94015" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94012" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94011" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94010" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93995" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93992" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93962" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93953" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405834" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93951" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93799" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92569" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379217" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91766" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549612" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91507" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86836"/>
              <exon start="86553" stop="86510"/>
              <exon start="86429" stop="86410"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87176" stop="86930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCCTCTAGCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG : ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG : ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG : GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG : GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG : GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAA : GGGGAACCAGATTTTAAAGGACAAAGAAAACCTATCTCATCTAT : CTGTACCCACCGGGTCCTGC</gDNA_template>
            <first_frame> I  S  S  S  *  I  K  S  D  H  I  Y  I  H  T  Y  I  L  Y  T  R  E  C  V  Y  I  Y  I  Y  *  K  S  S  N  *  S  I  F  R  *  P  R  G  F  I  S  R  V  V  R  D  F  W  E  V  L  F  W  G  K  F  D  *  A  E  W  H  K  L  W  K  N  G  T  S  R  C  R  L  S  P  V  P  T  S  L  P  Q  S  S  P  Q  S  V  V  L  W  R :   L  Y  L  L  I  T  C  T  *  T  P  S  *  W  *  S  N  T  R  C  G  A  W  L  Q  I  F  S  T  F  G  R  W  :  T  W  T  F  C  F  T  C  F  S  *  L  G  T  A  S  F  *  K  R  T  P  S  G  E  G  R  Q  I  S  S  T  C  S  C  L  V  P  L  F  *  Q  E  L  F  L  S  G  G  *  Y  L  M  S  Q  S  H  L  Q  G  S  Y  S  *  A  I  H  *  L  L  *  W :   F  M  Y  G  A  S  K  I  H  L  S  T  *  A  F  W  V  C  L  L  S  P  Q  L  T  S  H  G :   F  F  W  A  S  L  C  *  L  A  P  V  L  G  W  I  Y  W :   E  *  L  Q  A  M  L  I  I  S  *  K  T  S  I  R  E  *  L  V  V  D  P  *  K  L  Q  Q  L  S  K  H  C  L  L  M  S  R  *  W  W  L  A  L  L  M  F  A  S  L  L  L  L  L  M  K  F  H  Q  I  N  E  R  I  L  *  V  N  Q  W  L  C  L  Q  F  L  *  I  D  R  R  Y  L  V  G  G  N  Q  G  W  C  C  *  *  *  L  C  *  L  L  M  L  F  V  I  *  I  W  N  W  R  S  A  V  W  *  R  K  F  A  Y  M  K  C  F  F  S  V  K   : R  G  T  R  F  *  R  T  K  K  T  Y  L  I  Y  :  L  Y  P  P  G  P   </first_frame>
            <second_frame>  F  P  L  A  K  *  N  P  I  T  Y  I  Y  I  H  T  Y  Y  I  H  V  S  V  Y  I  Y  I  Y  I  R  N  P  R  I  D  Q  F  S  D  N  L  E  A  L  S  V  G  L  L  G  I  S  G  K  F  C  F  G  E  S  L  I  K  R  N  G  T  S  C  G  R  M  V  Q  A  D  A  D  Y  H  P  F  L  P  H  C  R  N  P  H  H  N  R  L  F  S  G   : D  Y  I  S  L  *  L  V  P  E  P  Q  V  S  G  E  A  I  P  G  V  A  P  G  Y  K  F  S  L  L  S  E  D  G :   L  G  L  S  V  S  H  V  F  P  S  S  V  L  Q  A  S  R  R  E  L  L  Q  G  K  D  G  R  F  L  L  H  A  L  V  W  C  H  C  F  N  R  N  C  S  C  R  G  D  D  T  L  C  L  R  V  I  C  K  D  H  I  P  E  Q  F  I  D  F  Y  D   : G  L  C  M  E  Q  A  K  S  I  Y  P  H  E  L  F  G  S  V  Y  F  H  R  S  L  P  P  M   : G  S  F  G  L  L  C  A  S  W  R  Q  C  L  G  G  S  T   : G  N  D  C  R  P  C  L  L  F  P  R  R  R  L  S  A  N  D  W  S  *  T  P  E  N  S  S  S  Y  Q  S  I  V  C  *  *  A  G  S  G  G  S  P  C  *  C  S  L  R  C  S  S  C  *  *  S  S  T  K  S  M  R  E  F  Y  K  *  T  S  G  S  V  F  S  F  C  K  L  T  V  D  I  W  L  E  E  I  R  V  G  V  V  D  D  D  C  A  S  Y  *  C  F  L  *  F  R  S  G  T  G  E  V  L  S  G  R  E  N  S  P  I  *  S  V  F  S  L  L  K  :  G  E  P  D  F  K  G  Q  R  K  P  I  S  S  I :   C  T  H  R  V  L  </second_frame>
            <third_frame>   F  L  *  L  N  K  I  R  S  H  I  Y  T  Y  I  H  I  I  Y  T  *  V  C  I  Y  I  Y  I  L  E  I  L  E  L  I  N  F  Q  I  T  *  R  L  Y  Q  S  G  C  *  G  F  L  G  S  F  V  L  G  K  V  *  L  S  G  M  A  Q  A  V  E  E  W  Y  K  Q  M  P  I  I  T  R  S  Y  L  T  A  A  I  L  T  T  I  G  C  S  L  E  :  I  I  S  P  Y  N  L  Y  L  N  P  K  L  V  V  K  Q  Y  Q  V  W  R  L  V  T  N  F  L  Y  F  R  K  M   : D  L  D  F  L  F  H  M  F  F  L  A  R  Y  C  K  L  L  E  E  N  S  F  R  G  R  T  A  D  F  F  Y  M  L  L  F  G  A  T  V  L  T  G  I  V  L  V  G  G  M  I  P  Y  V  S  E  S  F  A  R  I  I  F  L  S  N  S  L  T  F  M  M  :  V  Y  V  W  S  K  Q  N  P  F  I  H  M  S  F  L  G  L  F  T  F  T  A  A  Y  L  P  W  :  V  L  L  G  F  S  V  L  V  G  A  S  A  W  V  D  L  L  :  G  M  I  A  G  H  A  Y  Y  F  L  E  D  V  Y  P  R  M  T  G  R  R  P  L  K  T  P  A  V  I  K  A  L  F  A  D  E  P  V  V  V  A  R  P  A  N  V  R  F  A  A  P  P  V  D  E  V  P  P  N  Q  *  E  N  F  I  S  K  P  V  A  L  S  S  V  S  V  N  *  P  *  I  F  G  W  R  K  S  G  L  V  L  L  M  M  I  V  L  V  I  N  A  F  C  N  L  D  L  E  L  E  K  C  C  L  V  E  K  I  R  L  Y  E  V  F  F  L  C  *  K :   G  N  Q  I  L  K  D  K  E  N  L  S  H  L   : S  V  P  T  G  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93844" stop="93737"/>
                    <exon start="92623" stop="92524"/>
                    <exon start="91834" stop="91620"/>
                    <exon start="91524" stop="91441"/>
                    <exon start="88279" stop="88226"/>
                    <exon start="87224" stop="87039"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSGMAQAVEEWYKQMPIITRSYLTAAILTTIGCSLEIISPYNLYLNPKLVVKQYQVWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLVGGMIPYVSESFARIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPAVIKALFADEPVVVARPANVRFAAPPVDEVPPNQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="94029" e_stop="93737"/>
            <exon e_start="92623" e_stop="92524"/>
            <exon e_start="91834" e_stop="91620"/>
            <exon e_start="91524" e_stop="91441"/>
            <exon e_start="88279" e_stop="88226"/>
            <exon e_start="87224" e_stop="86831"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.853" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94029" e_stop="93737" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92623" e_stop="92524" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.853">
            <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91834" e_stop="91620" e_length="215"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.985">
            <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="91524" e_stop="91441" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="88279" e_stop="88226" e_length="54"/>
          </exon>
          <intron i_serial="5" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001"/>
          </intron>
          <exon e_serial="6" e_score="0.987">
            <gDNA_exon_boundary e_start="87224" e_stop="86831" e_length="394"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94029" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94021" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94015" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94012" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94011" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94010" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88244"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369436" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93995" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93992" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93962" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87199"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93953" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405834" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93951" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93799" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92569" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379217" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91821" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369435" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91766" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549612" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87176" stop="86930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCCTCTAGCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG : ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG : ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG : GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG : GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG : GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAAGTCTT</gDNA_template>
            <first_frame> I  S  S  S  *  I  K  S  D  H  I  Y  I  H  T  Y  I  L  Y  T  R  E  C  V  Y  I  Y  I  Y  *  K  S  S  N  *  S  I  F  R  *  P  R  G  F  I  S  R  V  V  R  D  F  W  E  V  L  F  W  G  K  F  D  *  A  E  W  H  K  L  W  K  N  G  T  S  R  C  R  L  S  P  V  P  T  S  L  P  Q  S  S  P  Q  S  V  V  L  W  R :   L  Y  L  L  I  T  C  T  *  T  P  S  *  W  *  S  N  T  R  C  G  A  W  L  Q  I  F  S  T  F  G  R  W  :  T  W  T  F  C  F  T  C  F  S  *  L  G  T  A  S  F  *  K  R  T  P  S  G  E  G  R  Q  I  S  S  T  C  S  C  L  V  P  L  F  *  Q  E  L  F  L  S  G  G  *  Y  L  M  S  Q  S  H  L  Q  G  S  Y  S  *  A  I  H  *  L  L  *  W :   F  M  Y  G  A  S  K  I  H  L  S  T  *  A  F  W  V  C  L  L  S  P  Q  L  T  S  H  G :   F  F  W  A  S  L  C  *  L  A  P  V  L  G  W  I  Y  W :   E  *  L  Q  A  M  L  I  I  S  *  K  T  S  I  R  E  *  L  V  V  D  P  *  K  L  Q  Q  L  S  K  H  C  L  L  M  S  R  *  W  W  L  A  L  L  M  F  A  S  L  L  L  L  L  M  K  F  H  Q  I  N  E  R  I  L  *  V  N  Q  W  L  C  L  Q  F  L  *  I  D  R  R  Y  L  V  G  G  N  Q  G  W  C  C  *  *  *  L  C  *  L  L  M  L  F  V  I  *  I  W  N  W  R  S  A  V  W  *  R  K  F  A  Y  M  K  C  F  F  S  V  K  S  L </first_frame>
            <second_frame>  F  P  L  A  K  *  N  P  I  T  Y  I  Y  I  H  T  Y  Y  I  H  V  S  V  Y  I  Y  I  Y  I  R  N  P  R  I  D  Q  F  S  D  N  L  E  A  L  S  V  G  L  L  G  I  S  G  K  F  C  F  G  E  S  L  I  K  R  N  G  T  S  C  G  R  M  V  Q  A  D  A  D  Y  H  P  F  L  P  H  C  R  N  P  H  H  N  R  L  F  S  G   : D  Y  I  S  L  *  L  V  P  E  P  Q  V  S  G  E  A  I  P  G  V  A  P  G  Y  K  F  S  L  L  S  E  D  G :   L  G  L  S  V  S  H  V  F  P  S  S  V  L  Q  A  S  R  R  E  L  L  Q  G  K  D  G  R  F  L  L  H  A  L  V  W  C  H  C  F  N  R  N  C  S  C  R  G  D  D  T  L  C  L  R  V  I  C  K  D  H  I  P  E  Q  F  I  D  F  Y  D   : G  L  C  M  E  Q  A  K  S  I  Y  P  H  E  L  F  G  S  V  Y  F  H  R  S  L  P  P  M   : G  S  F  G  L  L  C  A  S  W  R  Q  C  L  G  G  S  T   : G  N  D  C  R  P  C  L  L  F  P  R  R  R  L  S  A  N  D  W  S  *  T  P  E  N  S  S  S  Y  Q  S  I  V  C  *  *  A  G  S  G  G  S  P  C  *  C  S  L  R  C  S  S  C  *  *  S  S  T  K  S  M  R  E  F  Y  K  *  T  S  G  S  V  F  S  F  C  K  L  T  V  D  I  W  L  E  E  I  R  V  G  V  V  D  D  D  C  A  S  Y  *  C  F  L  *  F  R  S  G  T  G  E  V  L  S  G  R  E  N  S  P  I  *  S  V  F  S  L  L  K  V   </second_frame>
            <third_frame>   F  L  *  L  N  K  I  R  S  H  I  Y  T  Y  I  H  I  I  Y  T  *  V  C  I  Y  I  Y  I  L  E  I  L  E  L  I  N  F  Q  I  T  *  R  L  Y  Q  S  G  C  *  G  F  L  G  S  F  V  L  G  K  V  *  L  S  G  M  A  Q  A  V  E  E  W  Y  K  Q  M  P  I  I  T  R  S  Y  L  T  A  A  I  L  T  T  I  G  C  S  L  E  :  I  I  S  P  Y  N  L  Y  L  N  P  K  L  V  V  K  Q  Y  Q  V  W  R  L  V  T  N  F  L  Y  F  R  K  M   : D  L  D  F  L  F  H  M  F  F  L  A  R  Y  C  K  L  L  E  E  N  S  F  R  G  R  T  A  D  F  F  Y  M  L  L  F  G  A  T  V  L  T  G  I  V  L  V  G  G  M  I  P  Y  V  S  E  S  F  A  R  I  I  F  L  S  N  S  L  T  F  M  M  :  V  Y  V  W  S  K  Q  N  P  F  I  H  M  S  F  L  G  L  F  T  F  T  A  A  Y  L  P  W  :  V  L  L  G  F  S  V  L  V  G  A  S  A  W  V  D  L  L  :  G  M  I  A  G  H  A  Y  Y  F  L  E  D  V  Y  P  R  M  T  G  R  R  P  L  K  T  P  A  V  I  K  A  L  F  A  D  E  P  V  V  V  A  R  P  A  N  V  R  F  A  A  P  P  V  D  E  V  P  P  N  Q  *  E  N  F  I  S  K  P  V  A  L  S  S  V  S  V  N  *  P  *  I  F  G  W  R  K  S  G  L  V  L  L  M  M  I  V  L  V  I  N  A  F  C  N  L  D  L  E  L  E  K  C  C  L  V  E  K  I  R  L  Y  E  V  F  F  L  C  *  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93844" stop="93737"/>
                    <exon start="92623" stop="92524"/>
                    <exon start="91834" stop="91620"/>
                    <exon start="91524" stop="91441"/>
                    <exon start="88279" stop="88226"/>
                    <exon start="87224" stop="87039"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSGMAQAVEEWYKQMPIITRSYLTAAILTTIGCSLEIISPYNLYLNPKLVVKQYQVWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLVGGMIPYVSESFARIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPAVIKALFADEPVVVARPANVRFAAPPVDEVPPNQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="94029" e_stop="93737"/>
            <exon e_start="92623" e_stop="92524"/>
            <exon e_start="91834" e_stop="91620"/>
            <exon e_start="91524" e_stop="91441"/>
            <exon e_start="87224" e_stop="86836"/>
            <exon e_start="86334" e_stop="86287"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.853" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.988" e_score="0.968"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.542"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94029" e_stop="93737" e_length="293"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92623" e_stop="92524" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.853">
            <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91834" e_stop="91620" e_length="215"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.985">
            <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="0.968">
            <gDNA_exon_boundary e_start="91524" e_stop="91441" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.988">
            <gDNA_intron_boundary i_start="91440" i_stop="87225" i_length="4216"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87224" e_stop="86836" e_length="389"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86835" i_stop="86335" i_length="501"/>
          </intron>
          <exon e_serial="6" e_score="0.542">
            <gDNA_exon_boundary e_start="86334" e_stop="86287" e_length="48"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94029" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94021" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94015" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94012" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94011" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94010" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395909" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94009" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93995" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93992" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93953" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405834" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93951" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93846" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="87224" stop="87195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401826" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87224" stop="86836"/>
              <exon start="86334" stop="86287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87176" stop="86930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCCTCTAGCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG : ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG : ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAGGGGAAGGACGGCAGATTTCTTCTACATGCTCTTGTTTGGTGCCACTGTTTTAACAGGAATTGTTCTTGTCGGGGGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG : GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG : GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAA : ATATACATAAAAATAAAGCTGTTAAAGAACAATGCATGCAGCAAAAAT</gDNA_template>
            <first_frame> I  S  S  S  *  I  K  S  D  H  I  Y  I  H  T  Y  I  L  Y  T  R  E  C  V  Y  I  Y  I  Y  *  K  S  S  N  *  S  I  F  R  *  P  R  G  F  I  S  R  V  V  R  D  F  W  E  V  L  F  W  G  K  F  D  *  A  E  W  H  K  L  W  K  N  G  T  S  R  C  R  L  S  P  V  P  T  S  L  P  Q  S  S  P  Q  S  V  V  L  W  R :   L  Y  L  L  I  T  C  T  *  T  P  S  *  W  *  S  N  T  R  C  G  A  W  L  Q  I  F  S  T  F  G  R  W  :  T  W  T  F  C  F  T  C  F  S  *  L  G  T  A  S  F  *  K  R  T  P  S  G  E  G  R  Q  I  S  S  T  C  S  C  L  V  P  L  F  *  Q  E  L  F  L  S  G  G  *  Y  L  M  S  Q  S  H  L  Q  G  S  Y  S  *  A  I  H  *  L  L  *  W :   F  M  Y  G  A  S  K  I  H  L  S  T  *  A  F  W  V  C  L  L  S  P  Q  L  T  S  H  G :   E  *  L  Q  A  M  L  I  I  S  *  K  T  S  I  R  E  *  L  V  V  D  P  *  K  L  Q  Q  L  S  K  H  C  L  L  M  S  R  *  W  W  L  A  L  L  M  F  A  S  L  L  L  L  L  M  K  F  H  Q  I  N  E  R  I  L  *  V  N  Q  W  L  C  L  Q  F  L  *  I  D  R  R  Y  L  V  G  G  N  Q  G  W  C  C  *  *  *  L  C  *  L  L  M  L  F  V  I  *  I  W  N  W  R  S  A  V  W  *  R  K  F  A  Y  M  K  C  F  F  S  V  K   : N  I  H  K  N  K  A  V  K  E  Q  C  M  Q  Q  K  </first_frame>
            <second_frame>  F  P  L  A  K  *  N  P  I  T  Y  I  Y  I  H  T  Y  Y  I  H  V  S  V  Y  I  Y  I  Y  I  R  N  P  R  I  D  Q  F  S  D  N  L  E  A  L  S  V  G  L  L  G  I  S  G  K  F  C  F  G  E  S  L  I  K  R  N  G  T  S  C  G  R  M  V  Q  A  D  A  D  Y  H  P  F  L  P  H  C  R  N  P  H  H  N  R  L  F  S  G   : D  Y  I  S  L  *  L  V  P  E  P  Q  V  S  G  E  A  I  P  G  V  A  P  G  Y  K  F  S  L  L  S  E  D  G :   L  G  L  S  V  S  H  V  F  P  S  S  V  L  Q  A  S  R  R  E  L  L  Q  G  K  D  G  R  F  L  L  H  A  L  V  W  C  H  C  F  N  R  N  C  S  C  R  G  D  D  T  L  C  L  R  V  I  C  K  D  H  I  P  E  Q  F  I  D  F  Y  D   : G  L  C  M  E  Q  A  K  S  I  Y  P  H  E  L  F  G  S  V  Y  F  H  R  S  L  P  P  M   : G  N  D  C  R  P  C  L  L  F  P  R  R  R  L  S  A  N  D  W  S  *  T  P  E  N  S  S  S  Y  Q  S  I  V  C  *  *  A  G  S  G  G  S  P  C  *  C  S  L  R  C  S  S  C  *  *  S  S  T  K  S  M  R  E  F  Y  K  *  T  S  G  S  V  F  S  F  C  K  L  T  V  D  I  W  L  E  E  I  R  V  G  V  V  D  D  D  C  A  S  Y  *  C  F  L  *  F  R  S  G  T  G  E  V  L  S  G  R  E  N  S  P  I  *  S  V  F  S  L  L  K  :  I  Y  I  K  I  K  L  L  K  N  N  A  C  S  K  N </second_frame>
            <third_frame>   F  L  *  L  N  K  I  R  S  H  I  Y  T  Y  I  H  I  I  Y  T  *  V  C  I  Y  I  Y  I  L  E  I  L  E  L  I  N  F  Q  I  T  *  R  L  Y  Q  S  G  C  *  G  F  L  G  S  F  V  L  G  K  V  *  L  S  G  M  A  Q  A  V  E  E  W  Y  K  Q  M  P  I  I  T  R  S  Y  L  T  A  A  I  L  T  T  I  G  C  S  L  E  :  I  I  S  P  Y  N  L  Y  L  N  P  K  L  V  V  K  Q  Y  Q  V  W  R  L  V  T  N  F  L  Y  F  R  K  M   : D  L  D  F  L  F  H  M  F  F  L  A  R  Y  C  K  L  L  E  E  N  S  F  R  G  R  T  A  D  F  F  Y  M  L  L  F  G  A  T  V  L  T  G  I  V  L  V  G  G  M  I  P  Y  V  S  E  S  F  A  R  I  I  F  L  S  N  S  L  T  F  M  M  :  V  Y  V  W  S  K  Q  N  P  F  I  H  M  S  F  L  G  L  F  T  F  T  A  A  Y  L  P  W  :  G  M  I  A  G  H  A  Y  Y  F  L  E  D  V  Y  P  R  M  T  G  R  R  P  L  K  T  P  A  V  I  K  A  L  F  A  D  E  P  V  V  V  A  R  P  A  N  V  R  F  A  A  P  P  V  D  E  V  P  P  N  Q  *  E  N  F  I  S  K  P  V  A  L  S  S  V  S  V  N  *  P  *  I  F  G  W  R  K  S  G  L  V  L  L  M  M  I  V  L  V  I  N  A  F  C  N  L  D  L  E  L  E  K  C  C  L  V  E  K  I  R  L  Y  E  V  F  F  L  C  *  K :   Y  T  *  K  *  S  C  *  R  T  M  H  A  A  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93844" stop="93737"/>
                    <exon start="92623" stop="92524"/>
                    <exon start="91834" stop="91620"/>
                    <exon start="91524" stop="91441"/>
                    <exon start="87224" stop="87039"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSGMAQAVEEWYKQMPIITRSYLTAAILTTIGCSLEIISPYNLYLNPKLVVKQYQVWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLVGGMIPYVSESFARIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWGMIAGHAYYFLEDVYPRMTGRRPLKTPAVIKALFADEPVVVARPANVRFAAPPVDEVPPNQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="94019" e_stop="93737"/>
            <exon e_start="92623" e_stop="92524"/>
            <exon e_start="91834" e_stop="91765"/>
            <exon e_start="91691" e_stop="91620"/>
            <exon e_start="91524" e_stop="91441"/>
            <exon e_start="88279" e_stop="88226"/>
            <exon e_start="87224" e_stop="86836"/>
            <exon e_start="86043" e_stop="85566"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.853" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.985" e_score="0.972"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="0.952"/>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="0.944"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.967"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="94019" e_stop="93737" e_length="283"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93736" i_stop="92624" i_length="1113"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92623" e_stop="92524" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.853">
            <gDNA_intron_boundary i_start="92523" i_stop="91835" i_length="689"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91834" e_stop="91765" e_length="70"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91764" i_stop="91692" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="0.972">
            <gDNA_exon_boundary e_start="91691" e_stop="91620" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.981" acc_prob="0.985">
            <gDNA_intron_boundary i_start="91619" i_stop="91525" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="0.952">
            <gDNA_exon_boundary e_start="91524" e_stop="91441" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="91440" i_stop="88280" i_length="3161"/>
          </intron>
          <exon e_serial="6" e_score="0.944">
            <gDNA_exon_boundary e_start="88279" e_stop="88226" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="88225" i_stop="87225" i_length="1001"/>
          </intron>
          <exon e_serial="7" e_score="0.967">
            <gDNA_exon_boundary e_start="87224" e_stop="86836" e_length="389"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86835" i_stop="86044" i_length="792"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="86043" e_stop="85566" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94019" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91765"/>
              <exon start="91691" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453648" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94019" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91765"/>
              <exon start="91691" stop="91620"/>
              <exon start="91524" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="87162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94008" stop="93737"/>
              <exon start="92623" stop="92524"/>
              <exon start="91834" stop="91787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210083" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91513" stop="91441"/>
              <exon start="88279" stop="88226"/>
              <exon start="87224" stop="86836"/>
              <exon start="86043" stop="86011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395908" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87176" stop="86930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610627" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86014" stop="85566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTAAATAAAATCCGATCACATATATATACATACATACATATTATATACACGTGAGTGTGTATATATATATATATATTAGAAATCCTCGAATTGATCAATTTTCAGATAACCTAGAGGCTTTATCAGTCGGGTTGTTAGGGATTTCTGGGAAGTTTTGTTTTGGGGAAAGTTTGATTAAGCGGAATGGCACAAGCTGTGGAAGAATGGTACAAGCAGATGCCGATTATCACCCGTTCCTACCTCACTGCCGCAATCCTCACCACAATCGGTTGTTCTCTGGAG : ATTATATCTCCTTATAACTTGTACCTGAACCCCAAGTTAGTGGTGAAGCAATACCAGGTGTGGCGCCTGGTTACAAATTTTCTCTACTTTCGGAAGATGG : ACTTGGACTTTCTGTTTCACATGTTTTTCCTAGCTCGGTACTGCAAGCTTCTAGAAGAGAACTCCTTCAG : GGGATGATACCTTATGTCTCAGAGTCATTTGCAAGGATCATATTCCTGAGCAATTCATTGACTTTTATGATG : GTTTATGTATGGAGCAAGCAAAATCCATTTATCCACATGAGCTTTTTGGGTCTGTTTACTTTCACCGCAGCTTACCTCCCATGG : GTTCTTTTGGGCTTCTCTGTGCTAGTTGGCGCCAGTGCTTGGGTGGATCTACTG : GGAATGATTGCAGGCCATGCTTATTATTTCCTAGAAGACGTCTATCCGCGAATGACTGGTCGTAGACCCCTGAAAACTCCAGCAGTTATCAAAGCATTGTTTGCTGATGAGCCGGTAGTGGTGGCTCGCCCTGCTAATGTTCGCTTCGCTGCTCCTCCTGTTGATGAAGTTCCACCAAATCAATGAGAGAATTTTATAAGTAAACCAGTGGCTCTGTCTTCAGTTTCTGTAAATTGACCGTAGATATTTGGTTGGAGGAAATCAGGGTTGGTGTTGTTGATGATGATTGTGCTAGTTATTAATGCTTTTTGTAATTTAGATCTGGAACTGGAGAAGTGCTGTCTGGTAGAGAAAATTCGCCTATATGAAGTGTTTTTTCTCTGTTAAAA : AGTAAAATTACTAGAACAAACTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACGTGTATCACTAACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTCTTTTTGGAGGCAGTTTTCGCAGGATGTACAGCACAAGAGCTGAAGGAAGAATTT</gDNA_template>
            <first_frame> A  K  *  N  P  I  T  Y  I  Y  I  H  T  Y  Y  I  H  V  S  V  Y  I  Y  I  Y  I  R  N  P  R  I  D  Q  F  S  D  N  L  E  A  L  S  V  G  L  L  G  I  S  G  K  F  C  F  G  E  S  L  I  K  R  N  G  T  S  C  G  R  M  V  Q  A  D  A  D  Y  H  P  F  L  P  H  C  R  N  P  H  H  N  R  L  F  S  G   : D  Y  I  S  L  *  L  V  P  E  P  Q  V  S  G  E  A  I  P  G  V  A  P  G  Y  K  F  S  L  L  S  E  D  G :   L  G  L  S  V  S  H  V  F  P  S  S  V  L  Q  A  S  R  R  E  L  L  Q  :  G  M  I  P  Y  V  S  E  S  F  A  R  I  I  F  L  S  N  S  L  T  F  M  M  :  V  Y  V  W  S  K  Q  N  P  F  I  H  M  S  F  L  G  L  F  T  F  T  A  A  Y  L  P  W  :  V  L  L  G  F  S  V  L  V  G  A  S  A  W  V  D  L  L  :  G  M  I  A  G  H  A  Y  Y  F  L  E  D  V  Y  P  R  M  T  G  R  R  P  L  K  T  P  A  V  I  K  A  L  F  A  D  E  P  V  V  V  A  R  P  A  N  V  R  F  A  A  P  P  V  D  E  V  P  P  N  Q  *  E  N  F  I  S  K  P  V  A  L  S  S  V  S  V  N  *  P  *  I  F  G  W  R  K  S  G  L  V  L  L  M  M  I  V  L  V  I  N  A  F  C  N  L  D  L  E  L  E  K  C  C  L  V  E  K  I  R  L  Y  E  V  F  F  L  C  *  K :   V  K  L  L  E  Q  T  D  Q  T  K  D  I  S  H  C  S  K  G  D  P  E  H  H  S  Y  N  M  P  V  Q  W  R  Y  *  D  L  P  S  A  S  L  H  H  D  *  D  F  S  Q  T  W  G  T  L  I  C  L  M  L  H  T  K  T  T  E  T  I  *  C  K  Q  N  S  L  T  S  V  L  T  T  A  K  K  A  L  N  L  C  L  S  A  E  L  L  Q  P  N  I  L  L  Q  F  H  F  S  *  T  T  P  V  S  F  C  N  R  N  H  G  N  V  Y  H  *  R  *  N  S  A  A  A  N  *  L  G  G  I  V  Q  T  L  F  L  E  A  V  F  A  G  C  T  A  Q  E  L  K  E  E  F </first_frame>
            <second_frame>  L  N  K  I  R  S  H  I  Y  T  Y  I  H  I  I  Y  T  *  V  C  I  Y  I  Y  I  L  E  I  L  E  L  I  N  F  Q  I  T  *  R  L  Y  Q  S  G  C  *  G  F  L  G  S  F  V  L  G  K  V  *  L  S  G  M  A  Q  A  V  E  E  W  Y  K  Q  M  P  I  I  T  R  S  Y  L  T  A  A  I  L  T  T  I  G  C  S  L  E  :  I  I  S  P  Y  N  L  Y  L  N  P  K  L  V  V  K  Q  Y  Q  V  W  R  L  V  T  N  F  L  Y  F  R  K  M   : D  L  D  F  L  F  H  M  F  F  L  A  R  Y  C  K  L  L  E  E  N  S  F  R :   G  *  Y  L  M  S  Q  S  H  L  Q  G  S  Y  S  *  A  I  H  *  L  L  *  W :   F  M  Y  G  A  S  K  I  H  L  S  T  *  A  F  W  V  C  L  L  S  P  Q  L  T  S  H  G :   F  F  W  A  S  L  C  *  L  A  P  V  L  G  W  I  Y  W :   E  *  L  Q  A  M  L  I  I  S  *  K  T  S  I  R  E  *  L  V  V  D  P  *  K  L  Q  Q  L  S  K  H  C  L  L  M  S  R  *  W  W  L  A  L  L  M  F  A  S  L  L  L  L  L  M  K  F  H  Q  I  N  E  R  I  L  *  V  N  Q  W  L  C  L  Q  F  L  *  I  D  R  R  Y  L  V  G  G  N  Q  G  W  C  C  *  *  *  L  C  *  L  L  M  L  F  V  I  *  I  W  N  W  R  S  A  V  W  *  R  K  F  A  Y  M  K  C  F  F  S  V  K   : K  *  N  Y  *  N  K  L  T  K  Q  R  T  S  V  I  A  V  K  E  I  Q  N  I  I  V  T  T  C  Q  Y  N  G  D  T  E  I  Y  P  L  R  H  Y  I  M  T  R  I  F  H  R  R  G  E  H  L  F  V  S  C  F  T  L  K  P  Q  K  Q  Y  N  V  S  K  T  A  *  P  L  F  *  Q  L  P  K  K  R  *  I  F  A  F  P  Q  N  Y  C  N  R  I  S  F  C  S  F  T  F  P  E  Q  L  Q  L  A  S  A  T  E  T  M  G  T  C  I  T  N  D  K  I  L  L  Q  L  T  D  W  V  V  L  C  R  H  S  F  W  R  Q  F  S  Q  D  V  Q  H  K  S  *  R  K  N   </second_frame>
            <third_frame>   *  I  K  S  D  H  I  Y  I  H  T  Y  I  L  Y  T  R  E  C  V  Y  I  Y  I  Y  *  K  S  S  N  *  S  I  F  R  *  P  R  G  F  I  S  R  V  V  R  D  F  W  E  V  L  F  W  G  K  F  D  *  A  E  W  H  K  L  W  K  N  G  T  S  R  C  R  L  S  P  V  P  T  S  L  P  Q  S  S  P  Q  S  V  V  L  W  R :   L  Y  L  L  I  T  C  T  *  T  P  S  *  W  *  S  N  T  R  C  G  A  W  L  Q  I  F  S  T  F  G  R  W  :  T  W  T  F  C  F  T  C  F  S  *  L  G  T  A  S  F  *  K  R  T  P  S   : G  D  D  T  L  C  L  R  V  I  C  K  D  H  I  P  E  Q  F  I  D  F  Y  D   : G  L  C  M  E  Q  A  K  S  I  Y  P  H  E  L  F  G  S  V  Y  F  H  R  S  L  P  P  M   : G  S  F  G  L  L  C  A  S  W  R  Q  C  L  G  G  S  T   : G  N  D  C  R  P  C  L  L  F  P  R  R  R  L  S  A  N  D  W  S  *  T  P  E  N  S  S  S  Y  Q  S  I  V  C  *  *  A  G  S  G  G  S  P  C  *  C  S  L  R  C  S  S  C  *  *  S  S  T  K  S  M  R  E  F  Y  K  *  T  S  G  S  V  F  S  F  C  K  L  T  V  D  I  W  L  E  E  I  R  V  G  V  V  D  D  D  C  A  S  Y  *  C  F  L  *  F  R  S  G  T  G  E  V  L  S  G  R  E  N  S  P  I  *  S  V  F  S  L  L  K  :  S  K  I  T  R  T  N  *  P  N  K  G  H  Q  S  L  Q  *  R  R  S  R  T  S  *  L  Q  H  A  S  T  M  A  I  L  R  F  T  L  C  V  I  T  S  *  L  G  F  F  T  D  V  G  N  T  Y  L  S  H  A  S  H  *  N  H  R  N  N  I  M  *  A  K  Q  L  N  L  C  F  N  N  C  Q  K  S  V  E  S  L  P  F  R  R  I  I  A  T  E  Y  P  F  A  V  S  L  F  L  N  N  S  S  *  L  L  Q  Q  K  P  W  E  R  V  S  L  T  I  K  F  C  C  S  *  L  I  G  W  Y  C  A  D  T  L  F  G  G  S  F  R  R  M  Y  S  T  R  A  E  G  R  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92606" stop="92524"/>
                    <exon start="91834" stop="91765"/>
                    <exon start="91691" stop="91620"/>
                    <exon start="91524" stop="91441"/>
                    <exon start="88279" stop="88226"/>
                    <exon start="87224" stop="87039"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVPEPQVSGEAIPGVAPGYKFSLLSEDGLGLSVSHVFPSSVLQASRRELLQGMIPYVSESFARIIFLSNSLTFMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVLVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPAVIKALFADEPVVVARPANVRFAAPPVDEVPPNQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="6" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94010" stop="93737"/>
                    <exon start="92623" stop="92607"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPITYIYIHTYYIHVSVYIYIYIRNPRIDQFSDNLEALSVGLLGISGKFCFGESLIKRNGTSCGRMVQADADYHPFLPHCRNPHHNRLFSGDYISL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="6" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86029" stop="85817"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKLTKQRTSVIAVKEIQNIIVTTCQYNGDTEIYPLRHYIMTRIFHRRGEHLFVSCFTLKPQKQYNVSKTA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="6" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85783" stop="85577"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFAFPQNYCNRISFCSFTFPEQLQLASATETMGTCITNDKILLQLTDWVVLCRHSFWRQFSQDVQHKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="86132" e_stop="86116"/>
            <exon e_start="86024" e_stop="85566"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.486" acc_prob="0.000" e_score="0.529"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.529">
            <gDNA_exon_boundary e_start="86132" e_stop="86116" e_length="17"/>
          </exon>
          <intron i_serial="1" don_prob="0.486" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86115" i_stop="86025" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="86024" e_stop="85566" e_length="459"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86132" stop="86116"/>
              <exon start="86024" stop="85620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458129" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86014" stop="85566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGTGATATGTTGATTA : ACTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACGTGTATCACTAACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTCTTTTTGGAGGCAGTTTTCGCAGGATGTACAGCACAAGAGCTGAAGGAAGAATTT</gDNA_template>
            <first_frame> V  *  Y  V  D  * :   L  T  K  Q  R  T  S  V  I  A  V  K  E  I  Q  N  I  I  V  T  T  C  Q  Y  N  G  D  T  E  I  Y  P  L  R  H  Y  I  M  T  R  I  F  H  R  R  G  E  H  L  F  V  S  C  F  T  L  K  P  Q  K  Q  Y  N  V  S  K  T  A  *  P  L  F  *  Q  L  P  K  K  R  *  I  F  A  F  P  Q  N  Y  C  N  R  I  S  F  C  S  F  T  F  P  E  Q  L  Q  L  A  S  A  T  E  T  M  G  T  C  I  T  N  D  K  I  L  L  Q  L  T  D  W  V  V  L  C  R  H  S  F  W  R  Q  F  S  Q  D  V  Q  H  K  S  *  R  K  N   </first_frame>
            <second_frame>  C  D  M  L  I   : N  *  P  N  K  G  H  Q  S  L  Q  *  R  R  S  R  T  S  *  L  Q  H  A  S  T  M  A  I  L  R  F  T  L  C  V  I  T  S  *  L  G  F  F  T  D  V  G  N  T  Y  L  S  H  A  S  H  *  N  H  R  N  N  I  M  *  A  K  Q  L  N  L  C  F  N  N  C  Q  K  S  V  E  S  L  P  F  R  R  I  I  A  T  E  Y  P  F  A  V  S  L  F  L  N  N  S  S  *  L  L  Q  Q  K  P  W  E  R  V  S  L  T  I  K  F  C  C  S  *  L  I  G  W  Y  C  A  D  T  L  F  G  G  S  F  R  R  M  Y  S  T  R  A  E  G  R  I  </second_frame>
            <third_frame>   V  I  C  *  L  :  T  D  Q  T  K  D  I  S  H  C  S  K  G  D  P  E  H  H  S  Y  N  M  P  V  Q  W  R  Y  *  D  L  P  S  A  S  L  H  H  D  *  D  F  S  Q  T  W  G  T  L  I  C  L  M  L  H  T  K  T  T  E  T  I  *  C  K  Q  N  S  L  T  S  V  L  T  T  A  K  K  A  L  N  L  C  L  S  A  E  L  L  Q  P  N  I  L  L  Q  F  H  F  S  *  T  T  P  V  S  F  C  N  R  N  H  G  N  V  Y  H  *  R  *  N  S  A  A  A  N  *  L  G  G  I  V  Q  T  L  F  L  E  A  V  F  A  G  C  T  A  Q  E  L  K  E  E  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86023" stop="85817"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTKQRTSVIAVKEIQNIIVTTCQYNGDTEIYPLRHYIMTRIFHRRGEHLFVSCFTLKPQKQYNVSKTA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="7" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85783" stop="85577"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFAFPQNYCNRISFCSFTFPEQLQLASATETMGTCITNDKILLQLTDWVVLCRHSFWRQFSQDVQHKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="86368" e_stop="85566"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="86368" e_stop="85566" e_length="803"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86368" stop="85682"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86014" stop="85566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="8" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCGTTTAATGAGGATTGTTGTGTAACCTCAATTATATACATAAAAATAAAGCTGTTAAAGAACAATGCATGCAGCAAAAATGTTTCGGAGAACTGCAAAATGAATGTTTTCTATCATCAGTTCACCATATTTTGTATGACGAATCAGTTTTGCACCCAAAGTTGTGTAATTGTTGCCGTTAATTGGAAATAACTCCGTGCCCCAAGGGCTTCGAGTGAGTAGTACAAGCAGCATCGTGTGATATGTTGATTAGCGAGTAAACCTGTTACCGACCCGGATTTTGAACCATCTGTAACTGAATCTTTAGAATTCCTCGGTTCTAAGAGTAAAATTACTAGAACAAACTGACCAAACAAAGGACATCAGTCATTGCAGTAAAGGAGATCCAGAACATCATAGTTACAACATGCCAGTACAATGGCGATACTGAGATTTACCCTCTGCGTCATTACATCATGACTAGGATTTTTCACAGACGTGGGGAACACTTATTTGTCTCATGCTTCACACTAAAACCACAGAAACAATATAATGTAAGCAAAACAGCTTAACCTCTGTTTTAACAACTGCCAAAAAAGCGTTGAATCTTTGCCTTTCCGCAGAATTATTGCAACCGAATATCCTTTTGCAGTTTCACTTTTCCTGAACAACTCCAGTTAGCTTCTGCAACAGAAACCATGGGAACGTGTATCACTAACGATAAAATTCTGCTGCAGCTAACTGATTGGGTGGTATTGTGCAGACACTCTTTTTGGAGGCAGTTTTCGCAGGATGTACAGCACAAGAGCTGAAGGAAGAATTT</gDNA_template>
            <first_frame> G  V  *  *  G  L  L  C  N  L  N  Y  I  H  K  N  K  A  V  K  E  Q  C  M  Q  Q  K  C  F  G  E  L  Q  N  E  C  F  L  S  S  V  H  H  I  L  Y  D  E  S  V  L  H  P  K  L  C  N  C  C  R  *  L  E  I  T  P  C  P  K  G  F  E  *  V  V  Q  A  A  S  C  D  M  L  I  S  E  *  T  C  Y  R  P  G  F  *  T  I  C  N  *  I  F  R  I  P  R  F  *  E  *  N  Y  *  N  K  L  T  K  Q  R  T  S  V  I  A  V  K  E  I  Q  N  I  I  V  T  T  C  Q  Y  N  G  D  T  E  I  Y  P  L  R  H  Y  I  M  T  R  I  F  H  R  R  G  E  H  L  F  V  S  C  F  T  L  K  P  Q  K  Q  Y  N  V  S  K  T  A  *  P  L  F  *  Q  L  P  K  K  R  *  I  F  A  F  P  Q  N  Y  C  N  R  I  S  F  C  S  F  T  F  P  E  Q  L  Q  L  A  S  A  T  E  T  M  G  T  C  I  T  N  D  K  I  L  L  Q  L  T  D  W  V  V  L  C  R  H  S  F  W  R  Q  F  S  Q  D  V  Q  H  K  S  *  R  K  N   </first_frame>
            <second_frame>  A  F  N  E  D  C  C  V  T  S  I  I  Y  I  K  I  K  L  L  K  N  N  A  C  S  K  N  V  S  E  N  C  K  M  N  V  F  Y  H  Q  F  T  I  F  C  M  T  N  Q  F  C  T  Q  S  C  V  I  V  A  V  N  W  K  *  L  R  A  P  R  A  S  S  E  *  Y  K  Q  H  R  V  I  C  *  L  A  S  K  P  V  T  D  P  D  F  E  P  S  V  T  E  S  L  E  F  L  G  S  K  S  K  I  T  R  T  N  *  P  N  K  G  H  Q  S  L  Q  *  R  R  S  R  T  S  *  L  Q  H  A  S  T  M  A  I  L  R  F  T  L  C  V  I  T  S  *  L  G  F  F  T  D  V  G  N  T  Y  L  S  H  A  S  H  *  N  H  R  N  N  I  M  *  A  K  Q  L  N  L  C  F  N  N  C  Q  K  S  V  E  S  L  P  F  R  R  I  I  A  T  E  Y  P  F  A  V  S  L  F  L  N  N  S  S  *  L  L  Q  Q  K  P  W  E  R  V  S  L  T  I  K  F  C  C  S  *  L  I  G  W  Y  C  A  D  T  L  F  G  G  S  F  R  R  M  Y  S  T  R  A  E  G  R  I  </second_frame>
            <third_frame>   R  L  M  R  I  V  V  *  P  Q  L  Y  T  *  K  *  S  C  *  R  T  M  H  A  A  K  M  F  R  R  T  A  K  *  M  F  S  I  I  S  S  P  Y  F  V  *  R  I  S  F  A  P  K  V  V  *  L  L  P  L  I  G  N  N  S  V  P  Q  G  L  R  V  S  S  T  S  S  I  V  *  Y  V  D  *  R  V  N  L  L  P  T  R  I  L  N  H  L  *  L  N  L  *  N  S  S  V  L  R  V  K  L  L  E  Q  T  D  Q  T  K  D  I  S  H  C  S  K  G  D  P  E  H  H  S  Y  N  M  P  V  Q  W  R  Y  *  D  L  P  S  A  S  L  H  H  D  *  D  F  S  Q  T  W  G  T  L  I  C  L  M  L  H  T  K  T  T  E  T  I  *  C  K  Q  N  S  L  T  S  V  L  T  T  A  K  K  A  L  N  L  C  L  S  A  E  L  L  Q  P  N  I  L  L  Q  F  H  F  S  *  T  T  P  V  S  F  C  N  R  N  H  G  N  V  Y  H  *  R  *  N  S  A  A  A  N  *  L  G  G  I  V  Q  T  L  F  L  E  A  V  F  A  G  C  T  A  Q  E  L  K  E  E  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86029" stop="85817"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKLTKQRTSVIAVKEIQNIIVTTCQYNGDTEIYPLRHYIMTRIFHRRGEHLFVSCFTLKPQKQYNVSKTA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="8" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85783" stop="85577"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFAFPQNYCNRISFCSFTFPEQLQLASATETMGTCITNDKILLQLTDWVVLCRHSFWRQFSQDVQHKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="107986" PGL_stop="108661"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107986" e_stop="108661"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="107986" e_stop="108661" e_length="676"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107986" stop="108661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107986" stop="108614"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443533" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107986" stop="108578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107986" stop="108376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108132" stop="108658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E304768" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAGAAAGAGGCTCTTAGGTGCCTTTATTTTTCAATCACAAGTTTCCTTATTGACCTTTTCTATTCCTGCTTATAATCAATATAATGCATGGTATTCCAGGGGCCTCTTGCTACCGTAACGTCTCAAAATTGGGTTACCAGGCTCTTGAACTTAAAATACTACTGCAAGCAGTAGTAAAGTTGCAAAGGTGGTGGCGATGTAAATTGCTTCATGCACAGAGAACAAAAGCCACAGTTGTCATCCAATCGCATGTTTTAGGATGGATTGCCTGGAAACGTGCTTCAAACAAGGAACGATTACTTCAAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAAGTAAATTGCTTCATGAACAGAGAACAAAAGCAGCAGTTGTCATCCAATCACATATCCTAGGATGGTTAGTCCGGCAAAGTATTTCAAGAAATAAGGACCAATTACTTCAAGCAACATTGAAGTTGCAAAGGTGGTGGAGAGATAAATTGCTTCATAAACAGAAAACAAAAGCAGCAGTTGTCATCCAATCGCATGTCCAAGGATGGAAAGCTCGACAAAGTGCTTCAAGGAAGAAGCACCTAACGTTGCTAGCAGTATTAAAGTTGCAAAGGTGGTGGAGAGGAAAATTACTTCATAAACAGAGAACAAAATCAGCAGTTGTCATCCAATCGCATGTCC</gDNA_template>
            <first_frame> L  E  R  G  S  *  V  P  L  F  F  N  H  K  F  P  Y  *  P  F  L  F  L  L  I  I  N  I  M  H  G  I  P  G  A  S  C  Y  R  N  V  S  K  L  G  Y  Q  A  L  E  L  K  I  L  L  Q  A  V  V  K  L  Q  R  W  W  R  C  K  L  L  H  A  Q  R  T  K  A  T  V  V  I  Q  S  H  V  L  G  W  I  A  W  K  R  A  S  N  K  E  R  L  L  Q  A  V  L  K  L  Q  R  W  W  R  S  K  L  L  H  E  Q  R  T  K  A  A  V  V  I  Q  S  H  I  L  G  W  L  V  R  Q  S  I  S  R  N  K  D  Q  L  L  Q  A  T  L  K  L  Q  R  W  W  R  D  K  L  L  H  K  Q  K  T  K  A  A  V  V  I  Q  S  H  V  Q  G  W  K  A  R  Q  S  A  S  R  K  K  H  L  T  L  L  A  V  L  K  L  Q  R  W  W  R  G  K  L  L  H  K  Q  R  T  K  S  A  V  V  I  Q  S  H  V  </first_frame>
            <second_frame>  *  K  E  A  L  R  C  L  Y  F  S  I  T  S  F  L  I  D  L  F  Y  S  C  L  *  S  I  *  C  M  V  F  Q  G  P  L  A  T  V  T  S  Q  N  W  V  T  R  L  L  N  L  K  Y  Y  C  K  Q  *  *  S  C  K  G  G  G  D  V  N  C  F  M  H  R  E  Q  K  P  Q  L  S  S  N  R  M  F  *  D  G  L  P  G  N  V  L  Q  T  R  N  D  Y  F  K  Q  Y  *  S  C  K  G  G  G  E  V  N  C  F  M  N  R  E  Q  K  Q  Q  L  S  S  N  H  I  S  *  D  G  *  S  G  K  V  F  Q  E  I  R  T  N  Y  F  K  Q  H  *  S  C  K  G  G  G  E  I  N  C  F  I  N  R  K  Q  K  Q  Q  L  S  S  N  R  M  S  K  D  G  K  L  D  K  V  L  Q  G  R  S  T  *  R  C  *  Q  Y  *  S  C  K  G  G  G  E  E  N  Y  F  I  N  R  E  Q  N  Q  Q  L  S  S  N  R  M  S </second_frame>
            <third_frame>   R  K  R  L  L  G  A  F  I  F  Q  S  Q  V  S  L  L  T  F  S  I  P  A  Y  N  Q  Y  N  A  W  Y  S  R  G  L  L  L  P  *  R  L  K  I  G  L  P  G  S  *  T  *  N  T  T  A  S  S  S  K  V  A  K  V  V  A  M  *  I  A  S  C  T  E  N  K  S  H  S  C  H  P  I  A  C  F  R  M  D  C  L  E  T  C  F  K  Q  G  T  I  T  S  S  S  I  K  V  A  K  V  V  E  K  *  I  A  S  *  T  E  N  K  S  S  S  C  H  P  I  T  Y  P  R  M  V  S  P  A  K  Y  F  K  K  *  G  P  I  T  S  S  N  I  E  V  A  K  V  V  E  R  *  I  A  S  *  T  E  N  K  S  S  S  C  H  P  I  A  C  P  R  M  E  S  S  T  K  C  F  K  E  E  A  P  N  V  A  S  S  I  K  V  A  K  V  V  E  R  K  I  T  S  *  T  E  N  K  I  S  S  C  H  P  I  A  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108040" stop="108660"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFLFLLIINIMHGIPGASCYRNVSKLGYQALELKILLQAVVKLQRWWRCKLLHAQRTKATVVIQSHVLGWIAWKRASNKERLLQAVLKLQRWWRSKLLHEQRTKAAVVIQSHILGWLVRQSISRNKDQLLQATLKLQRWWRDKLLHKQKTKAAVVIQSHVQGWKARQSASRKKHLTLLAVLKLQRWWRGKLLHKQRTKSAVVIQSHV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="112097" PGL_stop="110565"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112097" e_stop="111896"/>
            <exon e_start="111781" e_stop="111275"/>
            <exon e_start="110576" e_stop="110565"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.097" e_score="0.913"/>
          <exon-only e_score="0.583"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="112097" e_stop="111896" e_length="202"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="1.000">
            <gDNA_intron_boundary i_start="111895" i_stop="111782" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="111781" e_stop="111275" e_length="507"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.097">
            <gDNA_intron_boundary i_start="111274" i_stop="110577" i_length="698"/>
          </intron>
          <exon e_serial="3" e_score="0.583">
            <gDNA_exon_boundary e_start="110576" e_stop="110565" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112097" stop="111896"/>
              <exon start="111781" stop="111369"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205242" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112091" stop="111896"/>
              <exon start="111781" stop="111525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112048" stop="111896"/>
              <exon start="111781" stop="111275"/>
              <exon start="110576" stop="110565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E432681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112041" stop="111896"/>
              <exon start="111781" stop="111341"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393110" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112041" stop="111896"/>
              <exon start="111781" stop="111359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393111" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112040" stop="111896"/>
              <exon start="111781" stop="111363"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374425" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACACCTCCCTAGCAGCCATCATTTTTTCCTCCTAAATCCTCTTCTTTCTTCCAAGAAAATGGAATTCTCAACTTTCCATCCCTCAACATGGAATTCTTTTTTCACCTCTCCTCTCCTCTTTCCCTATCAGTTCATTCCTGAGAATTATGTTCACTGGAGAGAGACCCCTGAATCTCACATATACTCTGCTGATCTTCCAG : GTGTGAAGAAAGAGGAAATAAAGGTGGAAGTTGAGGATTCAAGCTACCTGATAATAAGAACTGAAGCAGCCAATGAAACAACAGAGCCAATAAGGAGCTTTATGAGGAAATTTAGGCTACCTGGAATGGTGGATATGGATGGAATTTCTGCTAGTTATAGAGATGGTGTTTTGACAGTCACAGTTCCAAGAACACTTGTGAGAAGGGGATTTTTCATTGAACCAGATGACTTGACAGAAAGCATAGTGAATCTTGGTGCTAGTGCTGCTTGATTATTTTTGCTTCCAAACAAGATTTGGTTGATATTGATACCTAATCTTATTATTATTTTTGGGTTTAGGGAGAGGGATTTCAAGATTGTGCTCTCTTTGAGATTATGTACATAAGTTAGATCAGTGGTAATCCTTAAACTGAATTTGCTGTTATTTCAAAAACTATTGAGCTTGAAAAATACTATATTTGTCACAAAAGAATGGAGAGCAGTCTATTTCCAAGGGTGTGTTTGAT : ATGATTTAAAAA</gDNA_template>
            <first_frame> K  H  L  P  S  S  H  H  F  F  L  L  N  P  L  L  S  S  K  K  M  E  F  S  T  F  H  P  S  T  W  N  S  F  F  T  S  P  L  L  F  P  Y  Q  F  I  P  E  N  Y  V  H  W  R  E  T  P  E  S  H  I  Y  S  A  D  L  P   : G  V  K  K  E  E  I  K  V  E  V  E  D  S  S  Y  L  I  I  R  T  E  A  A  N  E  T  T  E  P  I  R  S  F  M  R  K  F  R  L  P  G  M  V  D  M  D  G  I  S  A  S  Y  R  D  G  V  L  T  V  T  V  P  R  T  L  V  R  R  G  F  F  I  E  P  D  D  L  T  E  S  I  V  N  L  G  A  S  A  A  *  L  F  L  L  P  N  K  I  W  L  I  L  I  P  N  L  I  I  I  F  G  F  R  E  R  D  F  K  I  V  L  S  L  R  L  C  T  *  V  R  S  V  V  I  L  K  L  N  L  L  L  F  Q  K  L  L  S  L  K  N  T  I  F  V  T  K  E  W  R  A  V  Y  F  Q  G  C  V  *   : Y  D  L  K  </first_frame>
            <second_frame>  N  T  S  L  A  A  I  I  F  S  S  *  I  L  F  F  L  P  R  K  W  N  S  Q  L  S  I  P  Q  H  G  I  L  F  S  P  L  L  S  S  F  P  I  S  S  F  L  R  I  M  F  T  G  E  R  P  L  N  L  T  Y  T  L  L  I  F  Q  :  V  *  R  K  R  K  *  R  W  K  L  R  I  Q  A  T  *  *  *  E  L  K  Q  P  M  K  Q  Q  S  Q  *  G  A  L  *  G  N  L  G  Y  L  E  W  W  I  W  M  E  F  L  L  V  I  E  M  V  F  *  Q  S  Q  F  Q  E  H  L  *  E  G  D  F  S  L  N  Q  M  T  *  Q  K  A  *  *  I  L  V  L  V  L  L  D  Y  F  C  F  Q  T  R  F  G  *  Y  *  Y  L  I  L  L  L  F  L  G  L  G  R  G  I  S  R  L  C  S  L  *  D  Y  V  H  K  L  D  Q  W  *  S  L  N  *  I  C  C  Y  F  K  N  Y  *  A  *  K  I  L  Y  L  S  Q  K  N  G  E  Q  S  I  S  K  G  V  F  D  :  M  I  *  K </second_frame>
            <third_frame>   T  P  P  *  Q  P  S  F  F  P  P  K  S  S  S  F  F  Q  E  N  G  I  L  N  F  P  S  L  N  M  E  F  F  F  H  L  S  S  P  L  S  L  S  V  H  S  *  E  L  C  S  L  E  R  D  P  *  I  S  H  I  L  C  *  S  S  R :   C  E  E  R  G  N  K  G  G  S  *  G  F  K  L  P  D  N  K  N  *  S  S  Q  *  N  N  R  A  N  K  E  L  Y  E  E  I  *  A  T  W  N  G  G  Y  G  W  N  F  C  *  L  *  R  W  C  F  D  S  H  S  S  K  N  T  C  E  K  G  I  F  H  *  T  R  *  L  D  R  K  H  S  E  S  W  C  *  C  C  L  I  I  F  A  S  K  Q  D  L  V  D  I  D  T  *  S  Y  Y  Y  F  W  V  *  G  E  G  F  Q  D  C  A  L  F  E  I  M  Y  I  S  *  I  S  G  N  P  *  T  E  F  A  V  I  S  K  T  I  E  L  E  K  Y  Y  I  C  H  K  R  M  E  S  S  L  F  P  R  V  C  L  I :   *  F  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112097" stop="111896"/>
                    <exon start="111781" stop="111510"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHLPSSHHFFLLNPLLSSKKMEFSTFHPSTWNSFFTSPLLFPYQFIPENYVHWRETPESHIYSADLPGVKKEEIKVEVEDSSYLIIRTEAANETTEPIRSFMRKFRLPGMVDMDGISASYRDGVLTVTVPRTLVRRGFFIEPDDLTESIVNLGASAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="115757" PGL_stop="117935"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115757" e_stop="116121"/>
            <exon e_start="117683" e_stop="117935"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="115757" e_stop="116121" e_length="365"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="116122" i_stop="117682" i_length="1561"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="117683" e_stop="117935" e_length="253"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115757" stop="116121"/>
              <exon start="117683" stop="117935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115757" stop="116112"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E583386" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115769" stop="116121"/>
              <exon start="117683" stop="117900"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115773" stop="116121"/>
              <exon start="117683" stop="117933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115778" stop="116121"/>
              <exon start="117683" stop="117887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTCTTATAGGGTTCCACCGTTCCCCCCCTCTCTGAACCCCATTTCATCACGATGCAACCAGCGAATTCCATGGTTCCACCACCACAGTACCAGCAGACACAGCAGTGGATGGCTCAGCCGCCGCCGCAGTATCAGGTTGCGCCTCCGCAGCAATCGGGATATTACTACCAGCAACCTCAGCAACAGGGCGGAGTTCCTCCACCCCAACAACAACAACTTCAGTACAACGCCTCTGGTTTGGCTGCTACTGCCGGTTCTGTTCAGCCGACTAGTGCTGATGAGATCCGAAGCCTTTGGATCGGAGATCTACAGTTTTGGATGGATGAGCAATACCTTCTCAACTGTTTCGCACAAACTGGAGAG : GTGACCTCTGCTAAAGTTATCCGTAACAAGCAAAGTGGACAATCAGAGGGTTATGGCTTTATTGAGTTTATTAGTCATGCTGCTGCAGAAAGGAATCTGCAAGCATATAATGGTACCTTGATGCCTAATATTGAGCAAAATTTCAGACTCAACTGGGCTTCACTCGGTTCTGGTGAAAAACGTTCTGATAATGGTCCTGAATATACAATATTTGTTGGTGACTTGGCAGCCGATGTTTCTGATTATATGCTTC</gDNA_template>
            <first_frame> H  S  Y  R  V  P  P  F  P  P  S  L  N  P  I  S  S  R  C  N  Q  R  I  P  W  F  H  H  H  S  T  S  R  H  S  S  G  W  L  S  R  R  R  S  I  R  L  R  L  R  S  N  R  D  I  T  T  S  N  L  S  N  R  A  E  F  L  H  P  N  N  N  N  F  S  T  T  P  L  V  W  L  L  L  P  V  L  F  S  R  L  V  L  M  R  S  E  A  F  G  S  E  I  Y  S  F  G  W  M  S  N  T  F  S  T  V  S  H  K  L  E  R :   *  P  L  L  K  L  S  V  T  S  K  V  D  N  Q  R  V  M  A  L  L  S  L  L  V  M  L  L  Q  K  G  I  C  K  H  I  M  V  P  *  C  L  I  L  S  K  I  S  D  S  T  G  L  H  S  V  L  V  K  N  V  L  I  M  V  L  N  I  Q  Y  L  L  V  T  W  Q  P  M  F  L  I  I  C  F </first_frame>
            <second_frame>  I  L  I  G  F  H  R  S  P  P  L  *  T  P  F  H  H  D  A  T  S  E  F  H  G  S  T  T  T  V  P  A  D  T  A  V  D  G  S  A  A  A  A  V  S  G  C  A  S  A  A  I  G  I  L  L  P  A  T  S  A  T  G  R  S  S  S  T  P  T  T  T  T  S  V  Q  R  L  W  F  G  C  Y  C  R  F  C  S  A  D  *  C  *  *  D  P  K  P  L  D  R  R  S  T  V  L  D  G  *  A  I  P  S  Q  L  F  R  T  N  W  R   : G  D  L  C  *  S  Y  P  *  Q  A  K  W  T  I  R  G  L  W  L  Y  *  V  Y  *  S  C  C  C  R  K  E  S  A  S  I  *  W  Y  L  D  A  *  Y  *  A  K  F  Q  T  Q  L  G  F  T  R  F  W  *  K  T  F  *  *  W  S  *  I  Y  N  I  C  W  *  L  G  S  R  C  F  *  L  Y  A   </second_frame>
            <third_frame>   F  L  *  G  S  T  V  P  P  L  S  E  P  H  F  I  T  M  Q  P  A  N  S  M  V  P  P  P  Q  Y  Q  Q  T  Q  Q  W  M  A  Q  P  P  P  Q  Y  Q  V  A  P  P  Q  Q  S  G  Y  Y  Y  Q  Q  P  Q  Q  Q  G  G  V  P  P  P  Q  Q  Q  Q  L  Q  Y  N  A  S  G  L  A  A  T  A  G  S  V  Q  P  T  S  A  D  E  I  R  S  L  W  I  G  D  L  Q  F  W  M  D  E  Q  Y  L  L  N  C  F  A  Q  T  G  E  :  V  T  S  A  K  V  I  R  N  K  Q  S  G  Q  S  E  G  Y  G  F  I  E  F  I  S  H  A  A  A  E  R  N  L  Q  A  Y  N  G  T  L  M  P  N  I  E  Q  N  F  R  L  N  W  A  S  L  G  S  G  E  K  R  S  D  N  G  P  E  Y  T  I  F  V  G  D  L  A  A  D  V  S  D  Y  M  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115768" stop="116121"/>
                    <exon start="117683" stop="117934"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>606</number_coding_nucleotides>
                  <number_encoded_amino_acids>202</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSTVPPLSEPHFITMQPANSMVPPPQYQQTQQWMAQPPPQYQVAPPQQSGYYYQQPQQQGGVPPPQQQQLQYNASGLAATAGSVQPTSADEIRSLWIGDLQFWMDEQYLLNCFAQTGEVTSAKVIRNKQSGQSEGYGFIEFISHAAAERNLQAYNGTLMPNIEQNFRLNWASLGSGEKRSDNGPEYTIFVGDLAADVSDYML</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="118009" PGL_stop="122599"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118009" e_stop="118151"/>
            <exon e_start="120597" e_stop="120652"/>
            <exon e_start="120728" e_stop="120858"/>
            <exon e_start="120948" e_stop="121047"/>
            <exon e_start="121138" e_stop="121308"/>
            <exon e_start="121506" e_stop="121852"/>
            <exon e_start="122573" e_stop="122599"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.916" e_score="0.972"/>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="0.929"/>
          <exon-intron don_prob="0.877" acc_prob="0.986" e_score="0.985"/>
          <exon-intron don_prob="0.998" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.265" e_score="1.000"/>
          <exon-only e_score="0.556"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="118009" e_stop="118151" e_length="143"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.916">
            <gDNA_intron_boundary i_start="118152" i_stop="120596" i_length="2445"/>
          </intron>
          <exon e_serial="2" e_score="0.929">
            <gDNA_exon_boundary e_start="120597" e_stop="120652" e_length="56"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="120653" i_stop="120727" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="0.985">
            <gDNA_exon_boundary e_start="120728" e_stop="120858" e_length="131"/>
          </exon>
          <intron i_serial="3" don_prob="0.877" acc_prob="0.986">
            <gDNA_intron_boundary i_start="120859" i_stop="120947" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="120948" e_stop="121047" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.984">
            <gDNA_intron_boundary i_start="121048" i_stop="121137" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="121138" e_stop="121308" e_length="171"/>
          </exon>
          <intron i_serial="5" don_prob="0.956" acc_prob="0.988">
            <gDNA_intron_boundary i_start="121309" i_stop="121505" i_length="197"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="121506" e_stop="121852" e_length="347"/>
          </exon>
          <intron i_serial="6" don_prob="0.972" acc_prob="0.265">
            <gDNA_intron_boundary i_start="121853" i_stop="122572" i_length="720"/>
          </intron>
          <exon e_serial="7" e_score="0.556">
            <gDNA_exon_boundary e_start="122573" e_stop="122599" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118009" stop="118151"/>
              <exon start="120597" stop="120652"/>
              <exon start="120728" stop="120786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118057" stop="118151"/>
              <exon start="120597" stop="120652"/>
              <exon start="120728" stop="120858"/>
              <exon start="120948" stop="121047"/>
              <exon start="121138" stop="121210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118115" stop="118151"/>
              <exon start="120597" stop="120652"/>
              <exon start="120728" stop="120858"/>
              <exon start="120948" stop="121047"/>
              <exon start="121138" stop="121308"/>
              <exon start="121506" stop="121844"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E592196" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120768" stop="120858"/>
              <exon start="120948" stop="121047"/>
              <exon start="121138" stop="121308"/>
              <exon start="121506" stop="121842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545658" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120768" stop="120858"/>
              <exon start="120948" stop="121047"/>
              <exon start="121138" stop="121308"/>
              <exon start="121506" stop="121842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549243" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120769" stop="120858"/>
              <exon start="120948" stop="121047"/>
              <exon start="121138" stop="121308"/>
              <exon start="121506" stop="121606"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310651" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120999" stop="121047"/>
              <exon start="121138" stop="121308"/>
              <exon start="121506" stop="121786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121285" stop="121308"/>
              <exon start="121506" stop="121852"/>
              <exon start="122573" stop="122599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E219526" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAGGGTTATGGTTTTGTTAAGTTTGGGGATGAAAGTGAGCAGTTGCGCGCTATGACTGAGATGAATGGACAGTTTTGCTCCACTAGGCCCATGCGGATTGGTCCCGCAGCTAACAAGAAGAGTATGGGTGGTCAAAGTCAAG : CTTCGTATCAAAGTTCACCTGGAACTCAAAATGAGGACGACCCATCTAATACCACT : ATTTTTGTTGGGAACTTGGATTCCAATATAACGGATGAACATTTAAGGCAGATTTTTGGACACTATGGGCAGTTGCTTCATGTAAAAATACCAGTAGGCAAGCGGTGTGGCTTTATTCAGTTTGCTGACAG : AAGTTGTGCTGAGGAAGCTCTACGGGTATTAAATGGAACTCAGCTGGGTGGACAAAGCATCCGTCTTTCATGGGGTCGAAGTCCTGCAAACAAGCAGCAG : CCTCAGCTTGATCCAAACCAATATGCTGGTTATTATGGGTATACTGCTGGATATGAAGGTTATGGTTATGCCCCCCCTGCTCAGGATCCAAATCAGTATTATGCGGGCTATGCTGGATATGGAAATTACGCACAACCTCAACAGCAGCAGCAAGTTTTGCAGCATCCTCAG : TGATATATGCTGGTGAAAGGATTTACTGAGTGCTTCCCGGCGTGATTTGTGTATTGATTTCAAAAGCGGGACATGAGGTTATCAGTTGGGATCCAGATGTGTATTTCACAATCTTAGGGTGTTGGAAACCTTTGTAGGCTATTTCATTGAGGATACAATTTATGGTTTCGATCAACTGATTGTATGCTGTTTGTTTTTTTATTTTTGCGTTGCCCTTTTATTACTTAGATATGAGATCTAGATATACTTGAAGGTCTTTGGAGAAGTGTAGGCATGTAACTGTATACTTGTGCTTTTTGGCTATCCTGGCAATGCTGAACACCCTATTTTGCTCGTTGCTCATTTTG : CAGTGGCCAAGAACTTAAAAAAAAAAT</gDNA_template>
            <first_frame> Q  G  L  W  F  C  *  V  W  G  *  K  *  A  V  A  R  Y  D  *  D  E  W  T  V  L  L  H  *  A  H  A  D  W  S  R  S  *  Q  E  E  Y  G  W  S  K  S  S :   F  V  S  K  F  T  W  N  S  K  *  G  R  P  I  *  Y  H   : Y  F  C  W  E  L  G  F  Q  Y  N  G  *  T  F  K  A  D  F  W  T  L  W  A  V  A  S  C  K  N  T  S  R  Q  A  V  W  L  Y  S  V  C  *  Q  :  K  L  C  *  G  S  S  T  G  I  K  W  N  S  A  G  W  T  K  H  P  S  F  M  G  S  K  S  C  K  Q  A  A   : A  S  A  *  S  K  P  I  C  W  L  L  W  V  Y  C  W  I  *  R  L  W  L  C  P  P  C  S  G  S  K  S  V  L  C  G  L  C  W  I  W  K  L  R  T  T  S  T  A  A  A  S  F  A  A  S  S   : V  I  Y  A  G  E  R  I  Y  *  V  L  P  G  V  I  C  V  L  I  S  K  A  G  H  E  V  I  S  W  D  P  D  V  Y  F  T  I  L  G  C  W  K  P  L  *  A  I  S  L  R  I  Q  F  M  V  S  I  N  *  L  Y  A  V  C  F  F  I  F  A  L  P  F  Y  Y  L  D  M  R  S  R  Y  T  *  R  S  L  E  K  C  R  H  V  T  V  Y  L  C  F  L  A  I  L  A  M  L  N  T  L  F  C  S  L  L  I  L  :  Q  W  P  R  T  *  K  K  N </first_frame>
            <second_frame>  K  G  Y  G  F  V  K  F  G  D  E  S  E  Q  L  R  A  M  T  E  M  N  G  Q  F  C  S  T  R  P  M  R  I  G  P  A  A  N  K  K  S  M  G  G  Q  S  Q   : A  S  Y  Q  S  S  P  G  T  Q  N  E  D  D  P  S  N  T  T  :  I  F  V  G  N  L  D  S  N  I  T  D  E  H  L  R  Q  I  F  G  H  Y  G  Q  L  L  H  V  K  I  P  V  G  K  R  C  G  F  I  Q  F  A  D  R :   S  C  A  E  E  A  L  R  V  L  N  G  T  Q  L  G  G  Q  S  I  R  L  S  W  G  R  S  P  A  N  K  Q  Q  :  P  Q  L  D  P  N  Q  Y  A  G  Y  Y  G  Y  T  A  G  Y  E  G  Y  G  Y  A  P  P  A  Q  D  P  N  Q  Y  Y  A  G  Y  A  G  Y  G  N  Y  A  Q  P  Q  Q  Q  Q  Q  V  L  Q  H  P  Q  :  *  Y  M  L  V  K  G  F  T  E  C  F  P  A  *  F  V  Y  *  F  Q  K  R  D  M  R  L  S  V  G  I  Q  M  C  I  S  Q  S  *  G  V  G  N  L  C  R  L  F  H  *  G  Y  N  L  W  F  R  S  T  D  C  M  L  F  V  F  L  F  L  R  C  P  F  I  T  *  I  *  D  L  D  I  L  E  G  L  W  R  S  V  G  M  *  L  Y  T  C  A  F  W  L  S  W  Q  C  *  T  P  Y  F  A  R  C  S  F  C :   S  G  Q  E  L  K  K  K   </second_frame>
            <third_frame>   R  V  M  V  L  L  S  L  G  M  K  V  S  S  C  A  L  *  L  R  *  M  D  S  F  A  P  L  G  P  C  G  L  V  P  Q  L  T  R  R  V  W  V  V  K  V  K  :  L  R  I  K  V  H  L  E  L  K  M  R  T  T  H  L  I  P  L :   F  L  L  G  T  W  I  P  I  *  R  M  N  I  *  G  R  F  L  D  T  M  G  S  C  F  M  *  K  Y  Q  *  A  S  G  V  A  L  F  S  L  L  T   : E  V  V  L  R  K  L  Y  G  Y  *  M  E  L  S  W  V  D  K  A  S  V  F  H  G  V  E  V  L  Q  T  S  S  S :   L  S  L  I  Q  T  N  M  L  V  I  M  G  I  L  L  D  M  K  V  M  V  M  P  P  L  L  R  I  Q  I  S  I  M  R  A  M  L  D  M  E  I  T  H  N  L  N  S  S  S  K  F  C  S  I  L  S :   D  I  C  W  *  K  D  L  L  S  A  S  R  R  D  L  C  I  D  F  K  S  G  T  *  G  Y  Q  L  G  S  R  C  V  F  H  N  L  R  V  L  E  T  F  V  G  Y  F  I  E  D  T  I  Y  G  F  D  Q  L  I  V  C  C  L  F  F  Y  F  C  V  A  L  L  L  L  R  Y  E  I  *  I  Y  L  K  V  F  G  E  V  *  A  C  N  C  I  L  V  L  F  G  Y  P  G  N  A  E  H  P  I  L  L  V  A  H  F   : A  V  A  K  N  L  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118010" stop="118151"/>
                    <exon start="120597" stop="120652"/>
                    <exon start="120728" stop="120858"/>
                    <exon start="120948" stop="121047"/>
                    <exon start="121138" stop="121308"/>
                    <exon start="121506" stop="121508"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>600</number_coding_nucleotides>
                  <number_encoded_amino_acids>200</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGYGFVKFGDESEQLRAMTEMNGQFCSTRPMRIGPAANKKSMGGQSQASYQSSPGTQNEDDPSNTTIFVGNLDSNITDEHLRQIFGHYGQLLHVKIPVGKRCGFIQFADRSCAEEALRVLNGTQLGGQSIRLSWGRSPANKQQPQLDPNQYAGYYGYTAGYEGYGYAPPAQDPNQYYAGYAGYGNYAQPQQQQQVLQHPQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="124556" PGL_stop="122485"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124556" e_stop="124403"/>
            <exon e_start="123266" e_stop="123186"/>
            <exon e_start="123013" e_stop="122962"/>
            <exon e_start="122815" e_stop="122485"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.958" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="124556" e_stop="124403" e_length="154"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="124402" i_stop="123267" i_length="1136"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="123266" e_stop="123186" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="123185" i_stop="123014" i_length="172"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="123013" e_stop="122962" e_length="52"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.958">
            <gDNA_intron_boundary i_start="122961" i_stop="122816" i_length="146"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122815" e_stop="122485" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124556" stop="124403"/>
              <exon start="123266" stop="123186"/>
              <exon start="123013" stop="122962"/>
              <exon start="122815" stop="122485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124555" stop="124403"/>
              <exon start="123266" stop="123186"/>
              <exon start="123013" stop="122962"/>
              <exon start="122815" stop="122539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261643" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAACACCTTTGGTACTCTTCAGAGGGACGCCCCTCCTGTGCGTCTATCACCTAATTATCCAGAACCTCCACCTGCTAATCCCACAGAAGACTCAGCTAATGTTGCAGAACAACCAAAGCAAATGAGTGCTGCTTTTGTTAAGGCTGCCAAGCAG : CAGTTCGATGTGTTGGTTGCTGCTCTTCCTTTATCGGATGGGAGTGAAGAAGCCCAATTGAAAAGAATTGCAGAACTCCAG : GCTGAGAACGATGCAGTTGGCCAAGAACTTCAAAAACAACTGGAAGCTGCAG : AGAAGGAGCTAAAGCAGGTCCAGGAGTTGTTTAACCAAGCAACAGATAACTGCCTGAACTTGAAGAAGCCAGAATGAATAAGGTAGTAGATATTTCAGTTTGCTTGAGGAGCCCATTCTTGCTGGAATATACCCTGGAGGAACAACAAATTGATTGTGTCCATGTCTGTTATGGGTACATTTATTAACTAATTATAATTAGGCATGCTCTGACATTATTTTTTTTTTAAGTTCTTGGCCACTGCTGAAGAAAAGAATTCAGTATACTATTGTATCTGGTTTAGAGCTGTGTTTATAGAATGAAAAGAGGTAGGGATAATGTGCCTAAATAG</gDNA_template>
            <first_frame> Q  H  L  W  Y  S  S  E  G  R  P  S  C  A  S  I  T  *  L  S  R  T  S  T  C  *  S  H  R  R  L  S  *  C  C  R  T  T  K  A  N  E  C  C  F  C  *  G  C  Q  A   : A  V  R  C  V  G  C  C  S  S  F  I  G  W  E  *  R  S  P  I  E  K  N  C  R  T  P   : G  *  E  R  C  S  W  P  R  T  S  K  T  T  G  S  C  R :   E  G  A  K  A  G  P  G  V  V  *  P  S  N  R  *  L  P  E  L  E  E  A  R  M  N  K  V  V  D  I  S  V  C  L  R  S  P  F  L  L  E  Y  T  L  E  E  Q  Q  I  D  C  V  H  V  C  Y  G  Y  I  Y  *  L  I  I  I  R  H  A  L  T  L  F  F  F  *  V  L  G  H  C  *  R  K  E  F  S  I  L  L  Y  L  V  *  S  C  V  Y  R  M  K  R  G  R  D  N  V  P  K  * </first_frame>
            <second_frame>  N  T  F  G  T  L  Q  R  D  A  P  P  V  R  L  S  P  N  Y  P  E  P  P  P  A  N  P  T  E  D  S  A  N  V  A  E  Q  P  K  Q  M  S  A  A  F  V  K  A  A  K  Q  :  Q  F  D  V  L  V  A  A  L  P  L  S  D  G  S  E  E  A  Q  L  K  R  I  A  E  L  Q  :  A  E  N  D  A  V  G  Q  E  L  Q  K  Q  L  E  A  A   : E  K  E  L  K  Q  V  Q  E  L  F  N  Q  A  T  D  N  C  L  N  L  K  K  P  E  *  I  R  *  *  I  F  Q  F  A  *  G  A  H  S  C  W  N  I  P  W  R  N  N  K  L  I  V  S  M  S  V  M  G  T  F  I  N  *  L  *  L  G  M  L  *  H  Y  F  F  F  K  F  L  A  T  A  E  E  K  N  S  V  Y  Y  C  I  W  F  R  A  V  F  I  E  *  K  E  V  G  I  M  C  L  N   </second_frame>
            <third_frame>   T  P  L  V  L  F  R  G  T  P  L  L  C  V  Y  H  L  I  I  Q  N  L  H  L  L  I  P  Q  K  T  Q  L  M  L  Q  N  N  Q  S  K  *  V  L  L  L  L  R  L  P  S  S :   S  S  M  C  W  L  L  L  F  L  Y  R  M  G  V  K  K  P  N  *  K  E  L  Q  N  S  R :   L  R  T  M  Q  L  A  K  N  F  K  N  N  W  K  L  Q  :  R  R  S  *  S  R  S  R  S  C  L  T  K  Q  Q  I  T  A  *  T  *  R  S  Q  N  E  *  G  S  R  Y  F  S  L  L  E  E  P  I  L  A  G  I  Y  P  G  G  T  T  N  *  L  C  P  C  L  L  W  V  H  L  L  T  N  Y  N  *  A  C  S  D  I  I  F  F  L  S  S  W  P  L  L  K  K  R  I  Q  Y  T  I  V  S  G  L  E  L  C  L  *  N  E  K  R  *  G  *  C  A  *  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="124555" stop="124403"/>
                    <exon start="123266" stop="123186"/>
                    <exon start="123013" stop="122962"/>
                    <exon start="122815" stop="122739"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NTFGTLQRDAPPVRLSPNYPEPPPANPTEDSANVAEQPKQMSAAFVKAAKQQFDVLVAALPLSDGSEEAQLKRIAELQAENDAVGQELQKQLEAAEKELKQVQELFNQATDNCLNLKKPE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="+" PGL_start="126467" PGL_stop="130140"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126467" e_stop="126973"/>
            <exon e_start="129776" e_stop="130140"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="126467" e_stop="126973" e_length="507"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="126974" i_stop="129775" i_length="2802"/>
          </intron>
          <exon e_serial="2" e_score="0.942">
            <gDNA_exon_boundary e_start="129776" e_stop="130140" e_length="365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126467" stop="126973"/>
              <exon start="129776" stop="129854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126468" stop="126973"/>
              <exon start="129776" stop="129852"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126468" stop="126800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126825" stop="126973"/>
              <exon start="129776" stop="130140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619488" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCACCTTCATATGATACAAATCAGTTACATGCTGCTGTGGTGGAATTGTATTGCCATGAAGGTGCAGAGATTAAGTACTCAACCGTGCAGAATTGGTACGCTGGAGATGAGGAAGGGAGAGGAGGGATTTATAATTTCGTTACAAAGAGAGGAATATGTGCTGGGGCTAGATCGAAGATATCATGGACACAAGTTGAGACTGGCTCAGCTATTACCTGGAAGTATCCAAGTGTTGTATTAGAGGGTGATGAATCAGTTGGTGAATTCTATTCTGTGGCATTGACCAACAACTATCAGCAGGCAGATACAGGAACAAAGATGGTACACAAAGGGAAGAATACGAGGAGTAGGATTATTTCAAAGGGTATTTCTGCAGGAAATTCTAGAAATTGTTACAGAGGACTAGTTCAGGTCTTATCAAGTGCAGAGAATGCTCGGAATTCCTCCCAGTGTGATTCAATGCTCATCGGTGATAAAGCTGCAGCCAACACTTATCCATATATTCAG : GCGAAGAACCCCTCTGCCCGGATAGAACATGAAGCAACAACTTCAAAGATTGGTGAAGATCAGTTGTTCTACTTTCAGCAGAGAGGAATCGACTATGAGAAAGCAATGGCTGCAATGATCTCTGGGTTTTGCAGAGATGTTTTCAATGAACTCCCTGATGAATTTGGTGCTGAGGTGAACCAATTAATGAGCTTGAAGCTTGAAGGTTCTGTAGGTTAAACAAAGCTGATAGATGCTGTGGAAAATGTGGACTTTTTAGCCATTTCTTTTGTCATCTGTAAAGTTGTAATAGTATCATACGCAAACAAACTTTTGCTATTTACACTTCATGTAAATAAATAATATGTCAAGGCATTGTCTTCTAA</gDNA_template>
            <first_frame> A  P  S  Y  D  T  N  Q  L  H  A  A  V  V  E  L  Y  C  H  E  G  A  E  I  K  Y  S  T  V  Q  N  W  Y  A  G  D  E  E  G  R  G  G  I  Y  N  F  V  T  K  R  G  I  C  A  G  A  R  S  K  I  S  W  T  Q  V  E  T  G  S  A  I  T  W  K  Y  P  S  V  V  L  E  G  D  E  S  V  G  E  F  Y  S  V  A  L  T  N  N  Y  Q  Q  A  D  T  G  T  K  M  V  H  K  G  K  N  T  R  S  R  I  I  S  K  G  I  S  A  G  N  S  R  N  C  Y  R  G  L  V  Q  V  L  S  S  A  E  N  A  R  N  S  S  Q  C  D  S  M  L  I  G  D  K  A  A  A  N  T  Y  P  Y  I  Q  :  A  K  N  P  S  A  R  I  E  H  E  A  T  T  S  K  I  G  E  D  Q  L  F  Y  F  Q  Q  R  G  I  D  Y  E  K  A  M  A  A  M  I  S  G  F  C  R  D  V  F  N  E  L  P  D  E  F  G  A  E  V  N  Q  L  M  S  L  K  L  E  G  S  V  G  *  T  K  L  I  D  A  V  E  N  V  D  F  L  A  I  S  F  V  I  C  K  V  V  I  V  S  Y  A  N  K  L  L  L  F  T  L  H  V  N  K  *  Y  V  K  A  L  S  S   </first_frame>
            <second_frame>  H  L  H  M  I  Q  I  S  Y  M  L  L  W  W  N  C  I  A  M  K  V  Q  R  L  S  T  Q  P  C  R  I  G  T  L  E  M  R  K  G  E  E  G  F  I  I  S  L  Q  R  E  E  Y  V  L  G  L  D  R  R  Y  H  G  H  K  L  R  L  A  Q  L  L  P  G  S  I  Q  V  L  Y  *  R  V  M  N  Q  L  V  N  S  I  L  W  H  *  P  T  T  I  S  R  Q  I  Q  E  Q  R  W  Y  T  K  G  R  I  R  G  V  G  L  F  Q  R  V  F  L  Q  E  I  L  E  I  V  T  E  D  *  F  R  S  Y  Q  V  Q  R  M  L  G  I  P  P  S  V  I  Q  C  S  S  V  I  K  L  Q  P  T  L  I  H  I  F  R :   R  R  T  P  L  P  G  *  N  M  K  Q  Q  L  Q  R  L  V  K  I  S  C  S  T  F  S  R  E  E  S  T  M  R  K  Q  W  L  Q  *  S  L  G  F  A  E  M  F  S  M  N  S  L  M  N  L  V  L  R  *  T  N  *  *  A  *  S  L  K  V  L  *  V  K  Q  S  *  *  M  L  W  K  M  W  T  F  *  P  F  L  L  S  S  V  K  L  *  *  Y  H  T  Q  T  N  F  C  Y  L  H  F  M  *  I  N  N  M  S  R  H  C  L  L  </second_frame>
            <third_frame>   T  F  I  *  Y  K  S  V  T  C  C  C  G  G  I  V  L  P  *  R  C  R  D  *  V  L  N  R  A  E  L  V  R  W  R  *  G  R  E  R  R  D  L  *  F  R  Y  K  E  R  N  M  C  W  G  *  I  E  D  I  M  D  T  S  *  D  W  L  S  Y  Y  L  E  V  S  K  C  C  I  R  G  *  *  I  S  W  *  I  L  F  C  G  I  D  Q  Q  L  S  A  G  R  Y  R  N  K  D  G  T  Q  R  E  E  Y  E  E  *  D  Y  F  K  G  Y  F  C  R  K  F  *  K  L  L  Q  R  T  S  S  G  L  I  K  C  R  E  C  S  E  F  L  P  V  *  F  N  A  H  R  *  *  S  C  S  Q  H  L  S  I  Y  S   : G  E  E  P  L  C  P  D  R  T  *  S  N  N  F  K  D  W  *  R  S  V  V  L  L  S  A  E  R  N  R  L  *  E  S  N  G  C  N  D  L  W  V  L  Q  R  C  F  Q  *  T  P  *  *  I  W  C  *  G  E  P  I  N  E  L  E  A  *  R  F  C  R  L  N  K  A  D  R  C  C  G  K  C  G  L  F  S  H  F  F  C  H  L  *  S  C  N  S  I  I  R  K  Q  T  F  A  I  Y  T  S  C  K  *  I  I  C  Q  G  I  V  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126467" stop="126973"/>
                    <exon start="129776" stop="129994"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>723</number_coding_nucleotides>
                  <number_encoded_amino_acids>241</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>APSYDTNQLHAAVVELYCHEGAEIKYSTVQNWYAGDEEGRGGIYNFVTKRGICAGARSKISWTQVETGSAITWKYPSVVLEGDESVGEFYSVALTNNYQQADTGTKMVHKGKNTRSRIISKGISAGNSRNCYRGLVQVLSSAENARNSSQCDSMLIGDKAAANTYPYIQAKNPSARIEHEATTSKIGEDQLFYFQQRGIDYEKAMAAMISGFCRDVFNELPDEFGAEVNQLMSLKLEGSVG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="+" PGL_start="146373" PGL_stop="156958"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="146373" e_stop="146582"/>
            <exon e_start="148144" e_stop="148356"/>
            <exon e_start="151252" e_stop="151347"/>
            <exon e_start="151464" e_stop="151532"/>
            <exon e_start="154470" e_stop="154670"/>
            <exon e_start="155199" e_stop="155345"/>
            <exon e_start="155434" e_stop="155562"/>
            <exon e_start="155637" e_stop="155767"/>
            <exon e_start="156411" e_stop="156958"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.946" e_score="0.965"/>
          <exon-intron don_prob="0.979" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.799" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="146373" e_stop="146582" e_length="210"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.989">
            <gDNA_intron_boundary i_start="146583" i_stop="148143" i_length="1561"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="148144" e_stop="148356" e_length="213"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.994">
            <gDNA_intron_boundary i_start="148357" i_stop="151251" i_length="2895"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="151252" e_stop="151347" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.899" acc_prob="0.944">
            <gDNA_intron_boundary i_start="151348" i_stop="151463" i_length="116"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="151464" e_stop="151532" e_length="69"/>
          </exon>
          <intron i_serial="4" don_prob="0.970" acc_prob="0.997">
            <gDNA_intron_boundary i_start="151533" i_stop="154469" i_length="2937"/>
          </intron>
          <exon e_serial="5" e_score="0.965">
            <gDNA_exon_boundary e_start="154470" e_stop="154670" e_length="201"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.946">
            <gDNA_intron_boundary i_start="154671" i_stop="155198" i_length="528"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="155199" e_stop="155345" e_length="147"/>
          </exon>
          <intron i_serial="6" don_prob="0.979" acc_prob="0.993">
            <gDNA_intron_boundary i_start="155346" i_stop="155433" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="155434" e_stop="155562" e_length="129"/>
          </exon>
          <intron i_serial="7" don_prob="0.985" acc_prob="1.000">
            <gDNA_intron_boundary i_start="155563" i_stop="155636" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="155637" e_stop="155767" e_length="131"/>
          </exon>
          <intron i_serial="8" don_prob="0.799" acc_prob="0.998">
            <gDNA_intron_boundary i_start="155768" i_stop="156410" i_length="643"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="156411" e_stop="156958" e_length="548"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146373" stop="146582"/>
              <exon start="148144" stop="148356"/>
              <exon start="151252" stop="151347"/>
              <exon start="151464" stop="151532"/>
              <exon start="154470" stop="154617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577636" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="148182" stop="148356"/>
              <exon start="151252" stop="151347"/>
              <exon start="151464" stop="151532"/>
              <exon start="154470" stop="154670"/>
              <exon start="155199" stop="155337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154563" stop="154670"/>
              <exon start="155199" stop="155345"/>
              <exon start="155434" stop="155562"/>
              <exon start="155637" stop="155767"/>
              <exon start="156411" stop="156457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="155464" stop="155562"/>
              <exon start="155637" stop="155767"/>
              <exon start="156411" stop="156825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="156493" stop="156958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234559" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="156502" stop="156958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235231" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTTTACTTGATTCTGGTTTGACTGCTGAAAGGATTCATACTCTTGAGCTTGTAGGATCAGGTTCTCGAATTCCAGCTATGGGAAGAATTTTAAATTCTGTTTTCAGAAAAGAACCGGGGAGGACAATAAATGCTAGTGAGTGTGTTGCACGTGGATGTGCTCTTCAATGTGCGATGCTCAGCCCCATATTTCGTGTTAGAGAGTACGAG : ATTCAGGATTCGTTTCCTTTCTCCATTGGGTTTGCATCTGATGAGGGCCCAGTTTGCACCCTATCAAATGGCGTATTGTTTCCAAAGGGCCATAGTTTTCCGAGCATGAAAGTGCTCACATTGCAAAGGAGCAACAGTTTCCACTTGGAAGCATTCTACACTAACCAGAATGAGTTGCCACCTGGTGTATCCGATAAAATAAGCAAATATACG : CTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCTTGG : CTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAATATGGAG : GGAGATGATACAAGGAAAAGTAAGGCCGTTAAGAGACAGGATATTCCTGTCAGTGGAAGTGTTGATGGTGGAATGACCCTCATGGAGCTATCCCAAGCTAAGGAAAAGGAACGCCAGTTAACGGAGCAAGACATAAAGGTGGAGCGAACTAAAGACAAGAAAAACACCCTGGAGGCATACGTCTATGAAACTCGTAATAAG : CTTTTGAATACCTACCGGAGCTTTGCTACGGATTCGGAGAGGGAGGGTATCTCTTGTAATCTACAACAGACTGAAGAATGGCTCTATGAAGATGGAGATGATGAGTCTGAACAAGTTTATGCAGAGAAGCTGGAGGATCTTAAAAAG : ATGGTGGACCCTGTGGAGCATCGATATAAGGAAGAAGAGGCGCGGGCACAAGCAACACGACATCTATTAAATACCATTGTGGAACATCGAATGGCTGCAGGATCACTTCCAGCCAGTGAGAAAGAAGCT : GTCACTAATGAATGCCATAAAGCAGAGCAGTGGCTTCGAGATAAATCCCACCAGCAGGAGACATTGCCCAGAAGTGCTGATCCAGTATTGTGGTCTACTGAAATCAAGAGAAAGACCGAGGCTTTTGAAGC : GATGTGTAAGCATGTAACGAGGCACAAGTCATCGCCCCAAAAGACTGAGGATGGTTCAGGTTTAAACCCCAGAAATAAAAGGGAAGATGGGATGGATGTAGATTAAACTGCATCAGAGACAAGTATGATAGCAGGCATGAGAAATGATCAGATTAGTTGTTACTGAGGCTGGGGAAACACCAGCCACTAGAGGCCTATTGCGAGTTATCTCCGGTATTTAAATCAAATCACATTCTCTATTTTGGGTAGAATCATTTGTTATTTACTCAAATTTCACGTTTCTCGTGATGTGTTATCTTGTGGCCTCAAAATTAATTATTGCAGAGTTTCTGCTGCTATTGTAGTTTTTAACAGCTTATAGGAGGCAGCACATTCTGTACTTGGATATTGAGAAAAAACTAAAGATTTTTCATCCGTTTTGTTCTGATTGTTCTCTATTGTGAGTAGCGCAACAGCCTTAGGGGGTGTTTTGGTTGCGGATAAAGTTAGATAGGAATTGTAATGCAACAATTGTAACACATGGATAAATAATCATTTCATTATCTGGT</gDNA_template>
            <first_frame> A  L  L  D  S  G  L  T  A  E  R  I  H  T  L  E  L  V  G  S  G  S  R  I  P  A  M  G  R  I  L  N  S  V  F  R  K  E  P  G  R  T  I  N  A  S  E  C  V  A  R  G  C  A  L  Q  C  A  M  L  S  P  I  F  R  V  R  E  Y  E  :  I  Q  D  S  F  P  F  S  I  G  F  A  S  D  E  G  P  V  C  T  L  S  N  G  V  L  F  P  K  G  H  S  F  P  S  M  K  V  L  T  L  Q  R  S  N  S  F  H  L  E  A  F  Y  T  N  Q  N  E  L  P  P  G  V  S  D  K  I  S  K  Y  T  :  L  G  P  F  Q  V  P  H  S  E  K  A  K  V  K  V  K  I  Q  L  N  L  H  G  V  V  T  V  E  S  A  W  :  L  I  K  D  Q  S  S  H  S  T  S  E  N  N  I  D  T  Y  A  E  N  M  E  :  G  D  D  T  R  K  S  K  A  V  K  R  Q  D  I  P  V  S  G  S  V  D  G  G  M  T  L  M  E  L  S  Q  A  K  E  K  E  R  Q  L  T  E  Q  D  I  K  V  E  R  T  K  D  K  K  N  T  L  E  A  Y  V  Y  E  T  R  N  K  :  L  L  N  T  Y  R  S  F  A  T  D  S  E  R  E  G  I  S  C  N  L  Q  Q  T  E  E  W  L  Y  E  D  G  D  D  E  S  E  Q  V  Y  A  E  K  L  E  D  L  K  K  :  M  V  D  P  V  E  H  R  Y  K  E  E  E  A  R  A  Q  A  T  R  H  L  L  N  T  I  V  E  H  R  M  A  A  G  S  L  P  A  S  E  K  E  A  :  V  T  N  E  C  H  K  A  E  Q  W  L  R  D  K  S  H  Q  Q  E  T  L  P  R  S  A  D  P  V  L  W  S  T  E  I  K  R  K  T  E  A  F  E  A :   M  C  K  H  V  T  R  H  K  S  S  P  Q  K  T  E  D  G  S  G  L  N  P  R  N  K  R  E  D  G  M  D  V  D  *  T  A  S  E  T  S  M  I  A  G  M  R  N  D  Q  I  S  C  Y  *  G  W  G  N  T  S  H  *  R  P  I  A  S  Y  L  R  Y  L  N  Q  I  T  F  S  I  L  G  R  I  I  C  Y  L  L  K  F  H  V  S  R  D  V  L  S  C  G  L  K  I  N  Y  C  R  V  S  A  A  I  V  V  F  N  S  L  *  E  A  A  H  S  V  L  G  Y  *  E  K  T  K  D  F  S  S  V  L  F  *  L  F  S  I  V  S  S  A  T  A  L  G  G  V  L  V  A  D  K  V  R  *  E  L  *  C  N  N  C  N  T  W  I  N  N  H  F  I  I  W  </first_frame>
            <second_frame>  L  Y  L  I  L  V  *  L  L  K  G  F  I  L  L  S  L  *  D  Q  V  L  E  F  Q  L  W  E  E  F  *  I  L  F  S  E  K  N  R  G  G  Q  *  M  L  V  S  V  L  H  V  D  V  L  F  N  V  R  C  S  A  P  Y  F  V  L  E  S  T  R :   F  R  I  R  F  L  S  P  L  G  L  H  L  M  R  A  Q  F  A  P  Y  Q  M  A  Y  C  F  Q  R  A  I  V  F  R  A  *  K  C  S  H  C  K  G  A  T  V  S  T  W  K  H  S  T  L  T  R  M  S  C  H  L  V  Y  P  I  K  *  A  N  I  R :   L  A  H  S  R  F  L  I  L  K  K  Q  R  S  K  S  K  F  N  *  T  S  M  V  L  L  Q  *  N  R  L  G :   *  S  K  I  N  Q  V  I  L  R  R  K  I  I  L  I  L  M  Q  K  I  W  R :   E  M  I  Q  G  K  V  R  P  L  R  D  R  I  F  L  S  V  E  V  L  M  V  E  *  P  S  W  S  Y  P  K  L  R  K  R  N  A  S  *  R  S  K  T  *  R  W  S  E  L  K  T  R  K  T  P  W  R  H  T  S  M  K  L  V  I  S :   F  *  I  P  T  G  A  L  L  R  I  R  R  G  R  V  S  L  V  I  Y  N  R  L  K  N  G  S  M  K  M  E  M  M  S  L  N  K  F  M  Q  R  S  W  R  I  L  K  R :   W  W  T  L  W  S  I  D  I  R  K  K  R  R  G  H  K  Q  H  D  I  Y  *  I  P  L  W  N  I  E  W  L  Q  D  H  F  Q  P  V  R  K  K  L :   S  L  M  N  A  I  K  Q  S  S  G  F  E  I  N  P  T  S  R  R  H  C  P  E  V  L  I  Q  Y  C  G  L  L  K  S  R  E  R  P  R  L  L  K   : R  C  V  S  M  *  R  G  T  S  H  R  P  K  R  L  R  M  V  Q  V  *  T  P  E  I  K  G  K  M  G  W  M  *  I  K  L  H  Q  R  Q  V  *  *  Q  A  *  E  M  I  R  L  V  V  T  E  A  G  E  T  P  A  T  R  G  L  L  R  V  I  S  G  I  *  I  K  S  H  S  L  F  W  V  E  S  F  V  I  Y  S  N  F  T  F  L  V  M  C  Y  L  V  A  S  K  L  I  I  A  E  F  L  L  L  L  *  F  L  T  A  Y  R  R  Q  H  I  L  Y  L  D  I  E  K  K  L  K  I  F  H  P  F  C  S  D  C  S  L  L  *  V  A  Q  Q  P  *  G  V  F  W  L  R  I  K  L  D  R  N  C  N  A  T  I  V  T  H  G  *  I  I  I  S  L  S  G </second_frame>
            <third_frame>   F  T  *  F  W  F  D  C  *  K  D  S  Y  S  *  A  C  R  I  R  F  S  N  S  S  Y  G  K  N  F  K  F  C  F  Q  K  R  T  G  E  D  N  K  C  *  *  V  C  C  T  W  M  C  S  S  M  C  D  A  Q  P  H  I  S  C  *  R  V  R   : D  S  G  F  V  S  F  L  H  W  V  C  I  *  *  G  P  S  L  H  P  I  K  W  R  I  V  S  K  G  P  *  F  S  E  H  E  S  A  H  I  A  K  E  Q  Q  F  P  L  G  S  I  L  H  *  P  E  *  V  A  T  W  C  I  R  *  N  K  Q  I  Y   : A  W  P  I  P  G  S  S  F  *  K  S  K  G  Q  S  Q  N  S  I  K  P  P  W  C  C  Y  S  R  I  G  L   : A  D  Q  R  S  I  K  S  F  Y  V  G  K  *  Y  *  Y  L  C  R  K  Y  G   : G  R  *  Y  K  E  K  *  G  R  *  E  T  G  Y  S  C  Q  W  K  C  *  W  W  N  D  P  H  G  A  I  P  S  *  G  K  G  T  P  V  N  G  A  R  H  K  G  G  A  N  *  R  Q  E  K  H  P  G  G  I  R  L  *  N  S  *  *   : A  F  E  Y  L  P  E  L  C  Y  G  F  G  E  G  G  Y  L  L  *  S  T  T  D  *  R  M  A  L  *  R  W  R  *  *  V  *  T  S  L  C  R  E  A  G  G  S  *  K   : D  G  G  P  C  G  A  S  I  *  G  R  R  G  A  G  T  S  N  T  T  S  I  K  Y  H  C  G  T  S  N  G  C  R  I  T  S  S  Q  *  E  R  S   : C  H  *  *  M  P  *  S  R  A  V  A  S  R  *  I  P  P  A  G  D  I  A  Q  K  C  *  S  S  I  V  V  Y  *  N  Q  E  K  D  R  G  F  *  S  :  D  V  *  A  C  N  E  A  Q  V  I  A  P  K  D  *  G  W  F  R  F  K  P  Q  K  *  K  G  R  W  D  G  C  R  L  N  C  I  R  D  K  Y  D  S  R  H  E  K  *  S  D  *  L  L  L  R  L  G  K  H  Q  P  L  E  A  Y  C  E  L  S  P  V  F  K  S  N  H  I  L  Y  F  G  *  N  H  L  L  F  T  Q  I  S  R  F  S  *  C  V  I  L  W  P  Q  N  *  L  L  Q  S  F  C  C  Y  C  S  F  *  Q  L  I  G  G  S  T  F  C  T  W  I  L  R  K  N  *  R  F  F  I  R  F  V  L  I  V  L  Y  C  E  *  R  N  S  L  R  G  C  F  G  C  G  *  S  *  I  G  I  V  M  Q  Q  L  *  H  M  D  K  *  S  F  H  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146373" stop="146582"/>
                    <exon start="148144" stop="148356"/>
                    <exon start="151252" stop="151347"/>
                    <exon start="151464" stop="151532"/>
                    <exon start="154470" stop="154670"/>
                    <exon start="155199" stop="155345"/>
                    <exon start="155434" stop="155562"/>
                    <exon start="155637" stop="155767"/>
                    <exon start="156411" stop="156516"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1299</number_coding_nucleotides>
                  <number_encoded_amino_acids>433</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALLDSGLTAERIHTLELVGSGSRIPAMGRILNSVFRKEPGRTINASECVARGCALQCAMLSPIFRVREYEIQDSFPFSIGFASDEGPVCTLSNGVLFPKGHSFPSMKVLTLQRSNSFHLEAFYTNQNELPPGVSDKISKYTLGPFQVPHSEKAKVKVKIQLNLHGVVTVESAWLIKDQSSHSTSENNIDTYAENMEGDDTRKSKAVKRQDIPVSGSVDGGMTLMELSQAKEKERQLTEQDIKVERTKDKKNTLEAYVYETRNKLLNTYRSFATDSEREGISCNLQQTEEWLYEDGDDESEQVYAEKLEDLKKMVDPVEHRYKEEEARAQATRHLLNTIVEHRMAAGSLPASEKEAVTNECHKAEQWLRDKSHQQETLPRSADPVLWSTEIKRKTEAFEAMCKHVTRHKSSPQKTEDGSGLNPRNKREDGMDVD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="150708" e_stop="151347"/>
            <exon e_start="151464" e_stop="151532"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.899" acc_prob="0.944" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="150708" e_stop="151347" e_length="640"/>
          </exon>
          <intron i_serial="1" don_prob="0.899" acc_prob="0.944">
            <gDNA_intron_boundary i_start="151348" i_stop="151463" i_length="116"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="151464" e_stop="151532" e_length="69"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150708" stop="151347"/>
              <exon start="151464" stop="151532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150708" stop="151347"/>
              <exon start="151464" stop="151526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150708" stop="151305"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333960" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGAAAAGAAATCATATTCGTTATAAAGGTTTCAAAATTTTCAATTGAAGGACAGGAAGATGGCTTTCTGCTAGCCTATTTCCCTGAAAGCACACTAACGTGTTGCATGTTAAATGTTATTCTCATGTGGAATATGATCAAAAGACGCCTTTTATTTGGTCTTATTATGCTATCAAGTATCTACCGGGATCTAATCTTATGCTGTAAAAGGAGTTATCCGATGACTGTGTCTTTTTGAATCTCTTTGGTCGGTGAGTCTAGAAGTTGAGAATATTTGTAGCATTAACTTTATTTCTTCCTTGCTTTAGAAGGCAGGTTATGCACCTTCTGCTTCCTTGCTGAATCTCAATGTGCAACAGTTTGAGGAGAATGCTTAACTGTAAAAATAATTAATTTCAGCAGTTTTAGAAACTCAAATTAATGCCAGAGATATGCTGTTGCCAAGTGTCTTAAGAATTTGCAATTAATGCTCTCATCCTTGATGCCAAGTTGACTCCATCAATTTGTCAGTTAATCTCACTCTGTTCTTATTTTTTTTTCAGCTTGGCCCATTCCAGGTTCCTCATTCTGAAAAAGCAAAGGTCAAAGTCAAAATTCAATTAAACCTCCATGGTGTTGTTACAGTAGAATCGGCTTGG : CTGATCAAAGATCAATCAAGTCATTCTACGTCGGAAAATAATATTGATACTTATGCAGAAAATATGGAG</gDNA_template>
            <first_frame> K  R  K  E  I  I  F  V  I  K  V  S  K  F  S  I  E  G  Q  E  D  G  F  L  L  A  Y  F  P  E  S  T  L  T  C  C  M  L  N  V  I  L  M  W  N  M  I  K  R  R  L  L  F  G  L  I  M  L  S  S  I  Y  R  D  L  I  L  C  C  K  R  S  Y  P  M  T  V  S  F  *  I  S  L  V  G  E  S  R  S  *  E  Y  L  *  H  *  L  Y  F  F  L  A  L  E  G  R  L  C  T  F  C  F  L  A  E  S  Q  C  A  T  V  *  G  E  C  L  T  V  K  I  I  N  F  S  S  F  R  N  S  N  *  C  Q  R  Y  A  V  A  K  C  L  K  N  L  Q  L  M  L  S  S  L  M  P  S  *  L  H  Q  F  V  S  *  S  H  S  V  L  I  F  F  S  A  W  P  I  P  G  S  S  F  *  K  S  K  G  Q  S  Q  N  S  I  K  P  P  W  C  C  Y  S  R  I  G  L   : A  D  Q  R  S  I  K  S  F  Y  V  G  K  *  Y  *  Y  L  C  R  K  Y  G  </first_frame>
            <second_frame>  K  E  K  K  S  Y  S  L  *  R  F  Q  N  F  Q  L  K  D  R  K  M  A  F  C  *  P  I  S  L  K  A  H  *  R  V  A  C  *  M  L  F  S  C  G  I  *  S  K  D  A  F  Y  L  V  L  L  C  Y  Q  V  S  T  G  I  *  S  Y  A  V  K  G  V  I  R  *  L  C  L  F  E  S  L  W  S  V  S  L  E  V  E  N  I  C  S  I  N  F  I  S  S  L  L  *  K  A  G  Y  A  P  S  A  S  L  L  N  L  N  V  Q  Q  F  E  E  N  A  *  L  *  K  *  L  I  S  A  V  L  E  T  Q  I  N  A  R  D  M  L  L  P  S  V  L  R  I  C  N  *  C  S  H  P  *  C  Q  V  D  S  I  N  L  S  V  N  L  T  L  F  L  F  F  F  Q  L  G  P  F  Q  V  P  H  S  E  K  A  K  V  K  V  K  I  Q  L  N  L  H  G  V  V  T  V  E  S  A  W  :  L  I  K  D  Q  S  S  H  S  T  S  E  N  N  I  D  T  Y  A  E  N  M  E </second_frame>
            <third_frame>   K  K  R  N  H  I  R  Y  K  G  F  K  I  F  N  *  R  T  G  R  W  L  S  A  S  L  F  P  *  K  H  T  N  V  L  H  V  K  C  Y  S  H  V  E  Y  D  Q  K  T  P  F  I  W  S  Y  Y  A  I  K  Y  L  P  G  S  N  L  M  L  *  K  E  L  S  D  D  C  V  F  L  N  L  F  G  R  *  V  *  K  L  R  I  F  V  A  L  T  L  F  L  P  C  F  R  R  Q  V  M  H  L  L  L  P  C  *  I  S  M  C  N  S  L  R  R  M  L  N  C  K  N  N  *  F  Q  Q  F  *  K  L  K  L  M  P  E  I  C  C  C  Q  V  S  *  E  F  A  I  N  A  L  I  L  D  A  K  L  T  P  S  I  C  Q  L  I  S  L  C  S  Y  F  F  F  S  L  A  H  S  R  F  L  I  L  K  K  Q  R  S  K  S  K  F  N  *  T  S  M  V  L  L  Q  *  N  R  L  G :   *  S  K  I  N  Q  V  I  L  R  R  K  I  I  L  I  L  M  Q  K  I  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="27" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="150708" stop="150947"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRKEIIFVIKVSKFSIEGQEDGFLLAYFPESTLTCCMLNVILMWNMIKRRLLFGLIMLSSIYRDLILCCKRSYPMTVSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="+"/>
                <serials PGL_serial="27" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="151192" stop="151347"/>
                    <exon start="151464" stop="151532"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQVDSINLSVNLTLFLFFFQLGPFQVPHSEKAKVKVKIQLNLHGVVTVESAWLIKDQSSHSTSENNIDTYAENME</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="-" PGL_start="158197" PGL_stop="157335"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="158197" e_stop="158104"/>
            <exon e_start="157996" e_stop="157910"/>
            <exon e_start="157611" e_stop="157335"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.795" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="158197" e_stop="158104" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="158103" i_stop="157997" i_length="107"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="157996" e_stop="157910" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.795" acc_prob="1.000">
            <gDNA_intron_boundary i_start="157909" i_stop="157612" i_length="298"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="157611" e_stop="157335" e_length="277"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="158197" stop="158104"/>
              <exon start="157996" stop="157910"/>
              <exon start="157611" stop="157346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="158194" stop="158104"/>
              <exon start="157996" stop="157910"/>
              <exon start="157611" stop="157335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309704" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCATTTGTTGCATACGTGAATGTGGGGTGTTATTATGGTGTAGGAATTCCATTGGGATGTCTTCTTGGCTTCAAATATGACCTTGGTGCTAAG : GGTATATGGACTGGGATGATTGGAGGGACTGTCATGCAAACCTTCATTCTGATTTGGTTCACATTCCGTACAGATTGGAACAAAGAG : GTAGAGAAAGCTAAAGAACGTTTAGACAAATGGGAGAATGTAAAAGAACCTCTAAGCAAGAAATGAAGGTGGCGAAGAAGTCAACAACAGTTCACATAAGCGTATCGACCAAAAGAGAATTGAAATCCGTTATGAAATAATTTACTATTTCTGATTTTCGAGAAAACAGATGAAAGTAATTATTCAAATATTAAGTGATTTAATAGTTTTCTACTTTAGCTGATATTCAAAATATTCGATTCAAGTAAACAAAGAGATATGGTTGAATTAAAAAGGA</gDNA_template>
            <first_frame> G  I  C  C  I  R  E  C  G  V  L  L  W  C  R  N  S  I  G  M  S  S  W  L  Q  I  *  P  W  C  *   : G  Y  M  D  W  D  D  W  R  D  C  H  A  N  L  H  S  D  L  V  H  I  P  Y  R  L  E  Q  R   : G  R  E  S  *  R  T  F  R  Q  M  G  E  C  K  R  T  S  K  Q  E  M  K  V  A  K  K  S  T  T  V  H  I  S  V  S  T  K  R  E  L  K  S  V  M  K  *  F  T  I  S  D  F  R  E  N  R  *  K  *  L  F  K  Y  *  V  I  *  *  F  S  T  L  A  D  I  Q  N  I  R  F  K  *  T  K  R  Y  G  *  I  K  K   </first_frame>
            <second_frame>  A  F  V  A  Y  V  N  V  G  C  Y  Y  G  V  G  I  P  L  G  C  L  L  G  F  K  Y  D  L  G  A  K  :  G  I  W  T  G  M  I  G  G  T  V  M  Q  T  F  I  L  I  W  F  T  F  R  T  D  W  N  K  E  :  V  E  K  A  K  E  R  L  D  K  W  E  N  V  K  E  P  L  S  K  K  *  R  W  R  R  S  Q  Q  Q  F  T  *  A  Y  R  P  K  E  N  *  N  P  L  *  N  N  L  L  F  L  I  F  E  K  T  D  E  S  N  Y  S  N  I  K  *  F  N  S  F  L  L  *  L  I  F  K  I  F  D  S  S  K  Q  R  D  M  V  E  L  K  R  </second_frame>
            <third_frame>   H  L  L  H  T  *  M  W  G  V  I  M  V  *  E  F  H  W  D  V  F  L  A  S  N  M  T  L  V  L  R :   V  Y  G  L  G  *  L  E  G  L  S  C  K  P  S  F  *  F  G  S  H  S  V  Q  I  G  T  K  R :   *  R  K  L  K  N  V  *  T  N  G  R  M  *  K  N  L  *  A  R  N  E  G  G  E  E  V  N  N  S  S  H  K  R  I  D  Q  K  R  I  E  I  R  Y  E  I  I  Y  Y  F  *  F  S  R  K  Q  M  K  V  I  I  Q  I  L  S  D  L  I  V  F  Y  F  S  *  Y  S  K  Y  S  I  Q  V  N  K  E  I  W  L  N  *  K  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="28" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="158196" stop="158104"/>
                    <exon start="157996" stop="157910"/>
                    <exon start="157611" stop="157546"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFVAYVNVGCYYGVGIPLGCLLGFKYDLGAKGIWTGMIGGTVMQTFILIWFTFRTDWNKEVEKAKERLDKWENVKEPLSKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="29" PGL_strand="-" PGL_start="169541" PGL_stop="168300"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="169541" e_stop="168867"/>
            <exon e_start="168503" e_stop="168300"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="169541" e_stop="168867" e_length="675"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="168866" i_stop="168504" i_length="363"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="168503" e_stop="168300" e_length="204"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="169541" stop="169057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336939" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="169398" stop="169063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300334" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="169171" stop="168867"/>
              <exon start="168503" stop="168300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269412" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAGTGTTACTAAAATAATAAAATAGTAGTAATACTTTATGTATAATATACTAATAAAGTTCAGTGCATATAAAATGTAAAATAAACAAAATTAATTTAAGAAAGATTTTCAACTTTTGTCCGTGTAGTTCAATTATTTACCATTAGACTTTAATGTACAAATATTTGTTCTTTCAAATCAGATCGAGGGGGCTAAGGCCTAACAGTCTAGTGAAGTTGTCAGTGGGTCGCTTCGGAGCAAGATATTGCTTATACCAATAGGTCACACCATAGTTACAGTATTTCTATCTTTAATTTTTTGCCTAGTAAATAAGCTATCTTGATTCGTCTTCGACTTTGATTTATTGATATTTATTATTGGAAAACATGGATGAGTGTAAGGGGTCAAGTGAACCTTTAATAGAAGAGAAAGAAGCAACAGTGGAACATGTAAGCTCCGAGCTTGAAGACATATTGTTGGACGCAAGATTGTCGCATTTTCAGCGGCTTAGACGGGCATCTGCCGTTGAATTCAGTAATCTGTTTCGACTAGCAGCTCCAGCAATCATTGTTTATTTGCTCAACAATGTTACGTCTGTGTCTACTCAAATATTCTGTGGTCATCTTGGTAATCTTGAACTTGCTGCTGCTTCACTTGGCAATGAAGGTATTCAACTCTTGGCTTATGGCGTCATG : TTAGGGATGGGGAGTGCAGTGGAGACACTATGTGGGCAAGCATATGGAGCTCACAAGTATGAAACATTGGGAATATATCTTCAAAGATCGACAATTCTGCTTATGTTATCTGGAATACCGATTATGGTGGCTTACTTATATTCAAAGCCAATTTTAATCTTACTAGGAGAATCAGAGAAAGTTGCATCAGCAGCTGCATTATTC</gDNA_template>
            <first_frame> *  V  L  L  K  *  *  N  S  S  N  T  L  C  I  I  Y  *  *  S  S  V  H  I  K  C  K  I  N  K  I  N  L  R  K  I  F  N  F  C  P  C  S  S  I  I  Y  H  *  T  L  M  Y  K  Y  L  F  F  Q  I  R  S  R  G  L  R  P  N  S  L  V  K  L  S  V  G  R  F  G  A  R  Y  C  L  Y  Q  *  V  T  P  *  L  Q  Y  F  Y  L  *  F  F  A  *  *  I  S  Y  L  D  S  S  S  T  L  I  Y  *  Y  L  L  L  E  N  M  D  E  C  K  G  S  S  E  P  L  I  E  E  K  E  A  T  V  E  H  V  S  S  E  L  E  D  I  L  L  D  A  R  L  S  H  F  Q  R  L  R  R  A  S  A  V  E  F  S  N  L  F  R  L  A  A  P  A  I  I  V  Y  L  L  N  N  V  T  S  V  S  T  Q  I  F  C  G  H  L  G  N  L  E  L  A  A  A  S  L  G  N  E  G  I  Q  L  L  A  Y  G  V  M  :  L  G  M  G  S  A  V  E  T  L  C  G  Q  A  Y  G  A  H  K  Y  E  T  L  G  I  Y  L  Q  R  S  T  I  L  L  M  L  S  G  I  P  I  M  V  A  Y  L  Y  S  K  P  I  L  I  L  L  G  E  S  E  K  V  A  S  A  A  A  L  F </first_frame>
            <second_frame>  K  C  Y  *  N  N  K  I  V  V  I  L  Y  V  *  Y  T  N  K  V  Q  C  I  *  N  V  K  *  T  K  L  I  *  E  R  F  S  T  F  V  R  V  V  Q  L  F  T  I  R  L  *  C  T  N  I  C  S  F  K  S  D  R  G  G  *  G  L  T  V  *  *  S  C  Q  W  V  A  S  E  Q  D  I  A  Y  T  N  R  S  H  H  S  Y  S  I  S  I  F  N  F  L  P  S  K  *  A  I  L  I  R  L  R  L  *  F  I  D  I  Y  Y  W  K  T  W  M  S  V  R  G  Q  V  N  L  *  *  K  R  K  K  Q  Q  W  N  M  *  A  P  S  L  K  T  Y  C  W  T  Q  D  C  R  I  F  S  G  L  D  G  H  L  P  L  N  S  V  I  C  F  D  *  Q  L  Q  Q  S  L  F  I  C  S  T  M  L  R  L  C  L  L  K  Y  S  V  V  I  L  V  I  L  N  L  L  L  L  H  L  A  M  K  V  F  N  S  W  L  M  A  S  C :   *  G  W  G  V  Q  W  R  H  Y  V  G  K  H  M  E  L  T  S  M  K  H  W  E  Y  I  F  K  D  R  Q  F  C  L  C  Y  L  E  Y  R  L  W  W  L  T  Y  I  Q  S  Q  F  *  S  Y  *  E  N  Q  R  K  L  H  Q  Q  L  H  Y   </second_frame>
            <third_frame>   S  V  T  K  I  I  K  *  *  *  Y  F  M  Y  N  I  L  I  K  F  S  A  Y  K  M  *  N  K  Q  N  *  F  K  K  D  F  Q  L  L  S  V  *  F  N  Y  L  P  L  D  F  N  V  Q  I  F  V  L  S  N  Q  I  E  G  A  K  A  *  Q  S  S  E  V  V  S  G  S  L  R  S  K  I  L  L  I  P  I  G  H  T  I  V  T  V  F  L  S  L  I  F  C  L  V  N  K  L  S  *  F  V  F  D  F  D  L  L  I  F  I  I  G  K  H  G  *  V  *  G  V  K  *  T  F  N  R  R  E  R  S  N  S  G  T  C  K  L  R  A  *  R  H  I  V  G  R  K  I  V  A  F  S  A  A  *  T  G  I  C  R  *  I  Q  *  S  V  S  T  S  S  S  S  N  H  C  L  F  A  Q  Q  C  Y  V  C  V  Y  S  N  I  L  W  S  S  W  *  S  *  T  C  C  C  F  T  W  Q  *  R  Y  S  T  L  G  L  W  R  H   : V  R  D  G  E  C  S  G  D  T  M  W  A  S  I  W  S  S  Q  V  *  N  I  G  N  I  S  S  K  I  D  N  S  A  Y  V  I  W  N  T  D  Y  G  G  L  L  I  F  K  A  N  F  N  L  T  R  R  I  R  E  S  C  I  S  S  C  I  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="169193" stop="168867"/>
                    <exon start="168503" stop="168300"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>531</number_coding_nucleotides>
                  <number_encoded_amino_acids>177</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLLLENMDECKGSSEPLIEEKEATVEHVSSELEDILLDARLSHFQRLRRASAVEFSNLFRLAAPAIIVYLLNNVTSVSTQIFCGHLGNLELAAASLGNEGIQLLAYGVMLGMGSAVETLCGQAYGAHKYETLGIYLQRSTILLMLSGIPIMVAYLYSKPILILLGESEKVASAAALF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="30" PGL_strand="-" PGL_start="174156" PGL_stop="171314"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="174156" e_stop="174086"/>
            <exon e_start="173963" e_stop="173952"/>
            <exon e_start="173385" e_stop="173242"/>
            <exon e_start="173143" e_stop="173099"/>
            <exon e_start="171744" e_stop="171314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.918" acc_prob="0.000" e_score="0.972"/>
          <exon-intron don_prob="0.998" acc_prob="0.681" e_score="0.917"/>
          <exon-intron don_prob="0.993" acc_prob="0.999" e_score="0.979"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="0.933"/>
          <exon-only e_score="0.875"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="174156" e_stop="174086" e_length="71"/>
          </exon>
          <intron i_serial="1" don_prob="0.918" acc_prob="0.000">
            <gDNA_intron_boundary i_start="174085" i_stop="173964" i_length="122"/>
          </intron>
          <exon e_serial="2" e_score="0.917">
            <gDNA_exon_boundary e_start="173963" e_stop="173952" e_length="12"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.681">
            <gDNA_intron_boundary i_start="173951" i_stop="173386" i_length="566"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="173385" e_stop="173242" e_length="144"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.999">
            <gDNA_intron_boundary i_start="173241" i_stop="173144" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.933">
            <gDNA_exon_boundary e_start="173143" e_stop="173099" e_length="45"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="173098" i_stop="171745" i_length="1354"/>
          </intron>
          <exon e_serial="5" e_score="0.875">
            <gDNA_exon_boundary e_start="171744" e_stop="171314" e_length="431"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="174156" stop="174086"/>
              <exon start="173963" stop="173952"/>
              <exon start="173385" stop="173242"/>
              <exon start="173143" stop="173099"/>
              <exon start="171744" stop="171314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E622034" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="30" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAGAAAGCCAATGTGAGCAAAAATATATACAAACTTTGTCACATTAGCCTCAAGGACTTCTCTGTGCAAG : TTGCACCCGAAG : TTTCTGGGTGTCTTTTGCCTAGTCTACCATCAGATGCTGTACTTGACCAAAGTTCGGGGATCAGCTTCGTCTGTGATTTGAACGATAACATTCCAGCCCCTTGGCCATCTCTCTCTCACTTACCAGTTTCCTCATGCAATAAAT : CTGTGAAAATTCCTGCACTTCCTGCGGCAGCATCTGGCCAGCTCA : GTCTGAATAGCTTGAGCATCGGGTCTCATCTGCGTCTCTTAGCCTTGACGGCTCTTGGAAGCCTCTTTTATACTTAATGCTGCCACTCCTGCTCAATTAACCTTGATGGCGAGCAAATCTTATGAAATAATGATACAAGTAACGAATATAAGTTAATGGTGCTGAAGGTTCTGATTTTCCTCAAGTCTAATGTGTACAAAAGCTGGAAAATCATGATCCAGAGTAAGAATGCCACTCGGAGAAGATTACAAGTTTGAGTTTTCCTACCATATTTGTTCCTCATTGTTGCGTAATAAGAAAATTTTGTAAAAGTACTTCAGGAGGAGGTTAAATTCCATGTAATTATTTCCACTTAGAAATACCATCTTGTATTGTATATGTTTGATACTCAAAGTCCTGAAAAATTATTGTGTCATTAACTAATGCATTAG</gDNA_template>
            <first_frame> T  E  S  Q  C  E  Q  K  Y  I  Q  T  L  S  H  *  P  Q  G  L  L  C  A  S :   C  T  R  S :   F  W  V  S  F  A  *  S  T  I  R  C  C  T  *  P  K  F  G  D  Q  L  R  L  *  F  E  R  *  H  S  S  P  L  A  I  S  L  S  L  T  S  F  L  M  Q  *  I :   C  E  N  S  C  T  S  C  G  S  I  W  P  A  Q :   S  E  *  L  E  H  R  V  S  S  A  S  L  S  L  D  G  S  W  K  P  L  L  Y  L  M  L  P  L  L  L  N  *  P  *  W  R  A  N  L  M  K  *  *  Y  K  *  R  I  *  V  N  G  A  E  G  S  D  F  P  Q  V  *  C  V  Q  K  L  E  N  H  D  P  E  *  E  C  H  S  E  K  I  T  S  L  S  F  P  T  I  F  V  P  H  C  C  V  I  R  K  F  C  K  S  T  S  G  G  G  *  I  P  C  N  Y  F  H  L  E  I  P  S  C  I  V  Y  V  *  Y  S  K  S  *  K  I  I  V  S  L  T  N  A  L  </first_frame>
            <second_frame>  Q  K  A  N  V  S  K  N  I  Y  K  L  C  H  I  S  L  K  D  F  S  V  Q   : V  A  P  E   : V  S  G  C  L  L  P  S  L  P  S  D  A  V  L  D  Q  S  S  G  I  S  F  V  C  D  L  N  D  N  I  P  A  P  W  P  S  L  S  H  L  P  V  S  S  C  N  K   : S  V  K  I  P  A  L  P  A  A  A  S  G  Q  L   : S  L  N  S  L  S  I  G  S  H  L  R  L  L  A  L  T  A  L  G  S  L  F  Y  T  *  C  C  H  S  C  S  I  N  L  D  G  E  Q  I  L  *  N  N  D  T  S  N  E  Y  K  L  M  V  L  K  V  L  I  F  L  K  S  N  V  Y  K  S  W  K  I  M  I  Q  S  K  N  A  T  R  R  R  L  Q  V  *  V  F  L  P  Y  L  F  L  I  V  A  *  *  E  N  F  V  K  V  L  Q  E  E  V  K  F  H  V  I  I  S  T  *  K  Y  H  L  V  L  Y  M  F  D  T  Q  S  P  E  K  L  L  C  H  *  L  M  H  * </second_frame>
            <third_frame>   R  K  P  M  *  A  K  I  Y  T  N  F  V  T  L  A  S  R  T  S  L  C  K  :  L  H  P  K  :  F  L  G  V  F  C  L  V  Y  H  Q  M  L  Y  L  T  K  V  R  G  S  A  S  S  V  I  *  T  I  T  F  Q  P  L  G  H  L  S  L  T  Y  Q  F  P  H  A  I  N  :  L  *  K  F  L  H  F  L  R  Q  H  L  A  S  S  :  V  *  I  A  *  A  S  G  L  I  C  V  S  *  P  *  R  L  L  E  A  S  F  I  L  N  A  A  T  P  A  Q  L  T  L  M  A  S  K  S  Y  E  I  M  I  Q  V  T  N  I  S  *  W  C  *  R  F  *  F  S  S  S  L  M  C  T  K  A  G  K  S  *  S  R  V  R  M  P  L  G  E  D  Y  K  F  E  F  S  Y  H  I  C  S  S  L  L  R  N  K  K  I  L  *  K  Y  F  R  R  R  L  N  S  M  *  L  F  P  L  R  N  T  I  L  Y  C  I  C  L  I  L  K  V  L  K  N  Y  C  V  I  N  *  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0204D01.1" strand="-"/>
                <serials PGL_serial="30" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="174155" stop="174086"/>
                    <exon start="173963" stop="173952"/>
                    <exon start="173385" stop="173242"/>
                    <exon start="173143" stop="173099"/>
                    <exon start="171744" stop="171668"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKANVSKNIYKLCHISLKDFSVQVAPEVSGCLLPSLPSDAVLDQSSGISFVCDLNDNIPAPWPSLSHLPVSSCNKSVKIPALPAAASGQLSLNSLSIGSHLRLLALTALGSLFYT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 324 chains have been computed
$ 
$ memory statistics:
$ 993688 bytes spliced alignments in total
$ 151 spliced alignments have been stored
$ 6580 bytes was the average size of a spliced alignment
$ 45528 bytes predicted gene locations in total
$ 30 predicted gene locations have been stored
$ 1517 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 392 backtrace matrices have been allocated
$ 
$ date finished: 2006-11-03 16:49:02
-->
